Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002122A_C01 KMC002122A_c01
(1106 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum] 417 e-115
emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris] gi|11558244|e... 408 e-113
emb|CAC84143.2| thioredoxin peroxidase [Nicotiana tabacum] 393 e-108
gb|AAM62760.1| 2-cys peroxiredoxin-like protein [Arabidopsis tha... 382 e-105
ref|NP_568166.1| 2-cys peroxiredoxin-like protein; protein id: A... 381 e-105
>emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum]
Length = 263
Score = 417 bits (1073), Expect = e-115
Identities = 219/264 (82%), Positives = 232/264 (86%), Gaps = 4/264 (1%)
Frame = -2
Query: 1072 MACSAASLFSLKLNPTPLFSPKPTT----SLSIPNSLNPLSTKPFSLPSVSLTRPSHSRR 905
MACSA L NP LFSPK ++ SLSIPN+ N L SLP +SL R S SRR
Sbjct: 1 MACSAPFASLLYSNPNTLFSPKFSSPRLSSLSIPNAPNSLPKLRTSLP-LSLNRSSSSRR 59
Query: 904 SFLVRATSELPLVGNTAPDFEAEAVFDQEFIKVK*SEYIGKKYVILFF*PLDFTLVCPTE 725
+F+VRA+ ELPLVGN+APDFEAEAVFDQEFIKVK SEYIGKKYVILFF PLDFT VCPTE
Sbjct: 60 TFVVRASGELPLVGNSAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTE 119
Query: 724 ITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKS 545
ITAFSDRHAEF+A+NTEILGVSVDSVFSHLAWVQ+DRKSGGLGDL YPLVSDVTKSIS+S
Sbjct: 120 ITAFSDRHAEFDAINTEILGVSVDSVFSHLAWVQSDRKSGGLGDLKYPLVSDVTKSISES 179
Query: 544 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCP 365
YGVLIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDETKRTLQALQYVQENPDEVCP
Sbjct: 180 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCP 239
Query: 364 AGWKPGEKSMKPDPKLSKEYFSAV 293
AGWKPGEKSMKPDPK SKEYF+AV
Sbjct: 240 AGWKPGEKSMKPDPKGSKEYFAAV 263
>emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris] gi|11558244|emb|CAC17804.1|
peroxiredoxin [Phaseolus vulgaris]
Length = 260
Score = 408 bits (1049), Expect = e-113
Identities = 216/264 (81%), Positives = 225/264 (84%), Gaps = 4/264 (1%)
Frame = -2
Query: 1072 MACSAASLFSLKLNPTPLFSPK----PTTSLSIPNSLNPLSTKPFSLPSVSLTRPSHSRR 905
MA SA + NP LFSPK +SLS PNS N L F SL S R
Sbjct: 1 MASSAPCASLISSNPNILFSPKFPSSSFSSLSFPNSPNSL----FKPLRTSLNPSSPPLR 56
Query: 904 SFLVRATSELPLVGNTAPDFEAEAVFDQEFIKVK*SEYIGKKYVILFF*PLDFTLVCPTE 725
+F+ RA+SELPLVGNTAPDFEAEAVFDQEFIKVK S+YIGKKYVILFF PLDFT VCPTE
Sbjct: 57 TFVARASSELPLVGNTAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTE 116
Query: 724 ITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKS 545
ITAFSDR+AEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPL+SDVTKSISKS
Sbjct: 117 ITAFSDRYAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKS 176
Query: 544 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCP 365
Y VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCP
Sbjct: 177 YDVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCP 236
Query: 364 AGWKPGEKSMKPDPKLSKEYFSAV 293
AGWKPGEKSMKPDPKLSKEYFSA+
Sbjct: 237 AGWKPGEKSMKPDPKLSKEYFSAI 260
>emb|CAC84143.2| thioredoxin peroxidase [Nicotiana tabacum]
Length = 271
Score = 393 bits (1009), Expect = e-108
Identities = 210/271 (77%), Positives = 224/271 (82%), Gaps = 11/271 (4%)
Frame = -2
Query: 1072 MACSAASLFSLKLNPTPL-FSPKPTTS------LSIPNSLNPL-STKPFS---LPSVSLT 926
MACSA+S L NP SPK + LS+P+S N L + KPF S+S
Sbjct: 1 MACSASSTALLSSNPKAASISPKSSFQAPISQCLSVPSSFNGLRNCKPFVSRVARSLSTR 60
Query: 925 RPSHSRRSFLVRATSELPLVGNTAPDFEAEAVFDQEFIKVK*SEYIGKKYVILFF*PLDF 746
RR F+VRA+SELPLVGN APDFEAEAVFDQEFIKVK SEYIGKKYVILFF PLDF
Sbjct: 61 VAQSQRRRFVVRASSELPLVGNQAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDF 120
Query: 745 TLVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDV 566
T VCPTEITAFSDR+ EFE LNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPL+SDV
Sbjct: 121 TFVCPTEITAFSDRYGEFEKLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDV 180
Query: 565 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQE 386
TKSISKSY VLIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDET RTLQALQYVQ+
Sbjct: 181 TKSISKSYNVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQALQYVQD 240
Query: 385 NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV 293
NPDEVCPAGWKPGEKSMKPDPK SKEYF+++
Sbjct: 241 NPDEVCPAGWKPGEKSMKPDPKGSKEYFASI 271
>gb|AAM62760.1| 2-cys peroxiredoxin-like protein [Arabidopsis thaliana]
Length = 271
Score = 382 bits (980), Expect = e-105
Identities = 206/271 (76%), Positives = 225/271 (83%), Gaps = 11/271 (4%)
Frame = -2
Query: 1072 MACSAASLFSLKLNPTPLFSPKPTTSLS----IPNSLNPLSTKPFSLPSV-----SLTRP 920
MA A+S + L+ + + P ++ LS +P +L+ S SL S SLT
Sbjct: 1 MASIASSSSTTLLSSSRVLLPSKSSLLSPTVSVPRTLHSSSASSSSLCSGFSSLGSLTTS 60
Query: 919 -SHSRRSFLVRATSE-LPLVGNTAPDFEAEAVFDQEFIKVK*SEYIGKKYVILFF*PLDF 746
S SRR+F V+A ++ LPLVGN APDFEAEAVFDQEFIKVK SEYIGKKYVILFF PLDF
Sbjct: 61 RSASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDF 120
Query: 745 TLVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDV 566
T VCPTEITAFSDR+ EFE LNTE+LGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSD+
Sbjct: 121 TFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDI 180
Query: 565 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQE 386
TKSISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDET RTLQALQYVQE
Sbjct: 181 TKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQE 240
Query: 385 NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV 293
NPDEVCPAGWKPGEKSMKPDPKLSKEYFSA+
Sbjct: 241 NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 271
>ref|NP_568166.1| 2-cys peroxiredoxin-like protein; protein id: At5g06290.1, supported
by cDNA: 15640., supported by cDNA: gi_11908047,
supported by cDNA: gi_12642865, supported by cDNA:
gi_13265489, supported by cDNA: gi_15451081, supported by
cDNA: gi_20148348 [Arabidopsis thaliana]
gi|11908048|gb|AAG41453.1|AF326871_1 putative 2-cys
peroxiredoxin protein [Arabidopsis thaliana]
gi|12642866|gb|AAK00375.1|AF339693_1 putative 2-cys
peroxiredoxin protein [Arabidopsis thaliana]
gi|15451082|gb|AAK96812.1| 2-cys peroxiredoxin-like
protein [Arabidopsis thaliana] gi|20148349|gb|AAM10065.1|
2-cys peroxiredoxin-like protein [Arabidopsis thaliana]
Length = 273
Score = 381 bits (979), Expect = e-105
Identities = 205/272 (75%), Positives = 223/272 (81%), Gaps = 11/272 (4%)
Frame = -2
Query: 1075 SMACSAASLFSLKLNPTPLFSPKPTTSLS--------IPNSLNPLST--KPFSLPSVSLT 926
SMA A+S + L+ + + P ++ LS IP+S S+ FS T
Sbjct: 2 SMASIASSSSTTLLSSSRVLLPSKSSLLSPTVSFPRIIPSSSASSSSLCSGFSSLGSLTT 61
Query: 925 RPSHSRRSFLVRATSE-LPLVGNTAPDFEAEAVFDQEFIKVK*SEYIGKKYVILFF*PLD 749
S SRR+F V+A ++ LPLVGN APDFEAEAVFDQEFIKVK SEYIGKKYVILFF PLD
Sbjct: 62 NRSASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLD 121
Query: 748 FTLVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSD 569
FT VCPTEITAFSDR+ EFE LNTE+LGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSD
Sbjct: 122 FTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSD 181
Query: 568 VTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQ 389
+TKSISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDET RTLQALQYVQ
Sbjct: 182 ITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQ 241
Query: 388 ENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV 293
ENPDEVCPAGWKPGEKSMKPDPKLSKEYFSA+
Sbjct: 242 ENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 273
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,000,497,130
Number of Sequences: 1393205
Number of extensions: 24966488
Number of successful extensions: 203959
Number of sequences better than 10.0: 1774
Number of HSP's better than 10.0 without gapping: 95681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163623
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 66712885146
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
