Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001766A_C01 KMC001766A_c01
(829 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177361.1| cytosolic factor, putative; protein id: At1g721... 133 4e-30
gb|AAK82462.1| At1g72160/T9N14_8 [Arabidopsis thaliana] gi|22137... 133 4e-30
ref|NP_192655.1| putative protein; protein id: At4g09160.1 [Arab... 119 5e-26
emb|CAB95829.1| hypothetical protein [Cicer arietinum] 110 3e-23
dbj|BAB86220.1| contains ESTs AU093915(E1276),AU162319(E60301)~s... 104 1e-21
>ref|NP_177361.1| cytosolic factor, putative; protein id: At1g72160.1, supported by
cDNA: gi_15081613 [Arabidopsis thaliana]
gi|25406150|pir||A96745 probable cytosolic factor
T9N14.8 [imported] - Arabidopsis thaliana
gi|12323663|gb|AAG51796.1|AC067754_12 cytosolic factor,
putative; 19554-17768 [Arabidopsis thaliana]
Length = 490
Score = 133 bits (334), Expect = 4e-30
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -1
Query: 829 YEKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPSDEPVVSNHFKVAELGK 650
YEKC +VWE+RV GWEVSY AEF P+ KD YTV+IQK KM PSDEPV+++ FKV ELGK
Sbjct: 407 YEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGK 466
Query: 649 LLLTVDNPTLKKKRLLYRFNIKP 581
+LLTVDNPT KKK+L+YRFN+KP
Sbjct: 467 VLLTVDNPTSKKKKLVYRFNVKP 489
>gb|AAK82462.1| At1g72160/T9N14_8 [Arabidopsis thaliana] gi|22137076|gb|AAM91383.1|
At1g72160/T9N14_8 [Arabidopsis thaliana]
Length = 390
Score = 133 bits (334), Expect = 4e-30
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -1
Query: 829 YEKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPSDEPVVSNHFKVAELGK 650
YEKC +VWE+RV GWEVSY AEF P+ KD YTV+IQK KM PSDEPV+++ FKV ELGK
Sbjct: 307 YEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGK 366
Query: 649 LLLTVDNPTLKKKRLLYRFNIKP 581
+LLTVDNPT KKK+L+YRFN+KP
Sbjct: 367 VLLTVDNPTSKKKKLVYRFNVKP 389
>ref|NP_192655.1| putative protein; protein id: At4g09160.1 [Arabidopsis thaliana]
gi|25407487|pir||H85092 hypothetical protein AT4g09160
[imported] - Arabidopsis thaliana
gi|7267559|emb|CAB78040.1| putative protein [Arabidopsis
thaliana]
Length = 723
Score = 119 bits (298), Expect = 5e-26
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = -1
Query: 826 EKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPSDEPVVSNHFKVAELGKL 647
+KC IVWE+RVVGWEVSY AEF P+ K+GYTVIIQK KM+ +E VVS+ FKV E+G++
Sbjct: 638 QKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRI 697
Query: 646 LLTVDNPTLKKKRLLYRFNIKP 581
LLTVDNPT KK L+YRF +KP
Sbjct: 698 LLTVDNPTSTKKMLIYRFKVKP 719
>emb|CAB95829.1| hypothetical protein [Cicer arietinum]
Length = 482
Score = 110 bits (275), Expect = 3e-23
Identities = 50/82 (60%), Positives = 65/82 (78%)
Frame = -1
Query: 826 EKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPSDEPVVSNHFKVAELGKL 647
EK +VWE+RVVGW+VSY AEF P A+DGYTVI+QK K++P+DE V++N FK+ E GK+
Sbjct: 398 EKSTLVWEVRVVGWDVSYGAEFVPSAEDGYTVIVQKNRKIAPADETVINNTFKIGEPGKV 457
Query: 646 LLTVDNPTLKKKRLLYRFNIKP 581
+LT+DN T KKK+LLYR P
Sbjct: 458 VLTIDNQTSKKKKLLYRSKTIP 479
>dbj|BAB86220.1| contains ESTs AU093915(E1276),AU162319(E60301)~similar to cytosolic
factor~unknown protein [Oryza sativa (japonica
cultivar-group)] gi|20804751|dbj|BAB92436.1| P0698A10.6
[Oryza sativa (japonica cultivar-group)]
Length = 613
Score = 104 bits (260), Expect = 1e-21
Identities = 47/81 (58%), Positives = 61/81 (75%)
Frame = -1
Query: 826 EKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPSDEPVVSNHFKVAELGKL 647
E I WELRV+GWEVSY AEF PDA+ GYTVI+QK K+ ++EP++ FKV E GK+
Sbjct: 527 ENSTIGWELRVLGWEVSYGAEFTPDAEGGYTVIVQKTRKVPANEEPIMKGSFKVGEPGKI 586
Query: 646 LLTVDNPTLKKKRLLYRFNIK 584
+LT++NP KKK+LLYR +K
Sbjct: 587 VLTINNPASKKKKLLYRSKVK 607
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 706,694,321
Number of Sequences: 1393205
Number of extensions: 15216126
Number of successful extensions: 36384
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 35236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36379
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 42643890261
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
