Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001340A_C01 KMC001340A_c01
(550 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB95830.1| hypothetical protein [Cicer arietinum] 114 6e-25
gb|AAL76271.1|AF467783_1 transcription factor EIL2 [Vigna radiata] 112 3e-24
gb|AAK67355.1|AF387795_1 transcription factor [Cucumis melo] 86 4e-16
gb|AAL76272.1|AF467784_1 transcription factor EIL1 [Vigna radiata] 82 3e-15
dbj|BAB64344.1| EIN3-like protein [Cucumis melo] 75 7e-13
>emb|CAB95830.1| hypothetical protein [Cicer arietinum]
Length = 354
Score = 114 bits (286), Expect = 6e-25
Identities = 53/70 (75%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
Frame = -2
Query: 537 NFFAREDGQFDRFKAMNSPFETNHNNNNNNIHMIFGSACDLASFDFKED--LHGVGMDTL 364
NFF R++ QFDRFK +NSPFETNH NNNNIH++FGS CDLASFDFKED L GVG+DT
Sbjct: 286 NFFTRDESQFDRFKPINSPFETNH--NNNNIHLMFGSPCDLASFDFKEDIQLQGVGIDTF 343
Query: 363 HKQPDVSIWY 334
HKQPD+SIWY
Sbjct: 344 HKQPDMSIWY 353
>gb|AAL76271.1|AF467783_1 transcription factor EIL2 [Vigna radiata]
Length = 622
Score = 112 bits (280), Expect = 3e-24
Identities = 51/67 (76%), Positives = 57/67 (84%)
Frame = -2
Query: 531 FAREDGQFDRFKAMNSPFETNHNNNNNNIHMIFGSACDLASFDFKEDLHGVGMDTLHKQP 352
FAR++ QFDRFKA+NSPFETNHNNNNN H +FGS CDLASFDFKED+ GVGMD L KQ
Sbjct: 557 FARDECQFDRFKALNSPFETNHNNNNN-FHSMFGSFCDLASFDFKEDMQGVGMDALQKQT 615
Query: 351 DVSIWYQ 331
D S+WYQ
Sbjct: 616 DFSVWYQ 622
>gb|AAK67355.1|AF387795_1 transcription factor [Cucumis melo]
Length = 621
Score = 85.5 bits (210), Expect = 4e-16
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 16/86 (18%)
Frame = -2
Query: 549 VMDGNFF------------AREDGQFDRFKAMNSPFETN---HNNNNNNIHMIFGSACDL 415
+M+GNFF R++GQ DRFK MNSPFE N HNNNNNN H++F S DL
Sbjct: 536 MMEGNFFDGSNVSSSHQMFTRDEGQSDRFKPMNSPFENNHHHHNNNNNNFHLMFSSPFDL 595
Query: 414 ASFDFKEDLHGV-GMDTLHKQPDVSI 340
++FD+KE++ GV +DTL KQ DVS+
Sbjct: 596 STFDYKEEVPGVAAIDTLSKQQDVSM 621
>gb|AAL76272.1|AF467784_1 transcription factor EIL1 [Vigna radiata]
Length = 609
Score = 82.4 bits (202), Expect = 3e-15
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = -2
Query: 543 DGNFFAREDGQFDRFKA--MNSPFETNHNNNNNNIHMIFGSACDLASFDFKEDLHGVGMD 370
+GNFFARE+GQF+RFKA MN+PF+TN HM+F CDL+SFDFK D+ G GMD
Sbjct: 545 EGNFFAREEGQFERFKAMNMNAPFDTN--------HMLFSPQCDLSSFDFK-DIQGGGMD 595
Query: 369 TLHK-QPDVSIWYQ 331
T H+ Q +VSIW++
Sbjct: 596 TGHRQQQEVSIWFE 609
>dbj|BAB64344.1| EIN3-like protein [Cucumis melo]
Length = 693
Score = 74.7 bits (182), Expect = 7e-13
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 14/75 (18%)
Frame = -2
Query: 549 VMDGNFF------------AREDGQFDRFKAMNSPFETN--HNNNNNNIHMIFGSACDLA 412
+M+GNFF R++GQFDRFK MNSPFE N H+NNNNN H++F S DL+
Sbjct: 537 MMEGNFFDGSNVSSSHQMFTRDEGQFDRFKPMNSPFENNHHHHNNNNNFHLMFSSPFDLS 596
Query: 411 SFDFKEDLHGVGMDT 367
+FD+KE++ V T
Sbjct: 597 TFDYKEEVPSVQPST 611
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,599,474
Number of Sequences: 1393205
Number of extensions: 10558079
Number of successful extensions: 73972
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 26314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58772
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
