Pseudomonas putida [gbbct]: 6891 CDS's (2266762 codons)
fields: [triplet] [amino acid] [fraction] [frequency: per thousand] ([number])
UUU F 0.21 7.3 ( 16643) UCU S 0.05 2.7 ( 6008) UAU Y 0.28 7.2 ( 16352) UGU C 0.19 2.1 ( 4657)
UUC F 0.79 28.2 ( 63984) UCC S 0.15 8.7 ( 19764) UAC Y 0.72 18.3 ( 41515) UGC C 0.81 8.6 ( 19420)
UUA L 0.01 1.5 ( 3409) UCA S 0.05 3.0 ( 6902) UAA * 0.22 0.7 ( 1525) UGA * 0.66 2.0 ( 4562)
UUG L 0.14 16.4 ( 37276) UCG S 0.25 13.9 ( 31597) UAG * 0.12 0.4 ( 804) UGG W 1.00 14.4 ( 32681)
CUU L 0.06 7.3 ( 16535) CCU P 0.12 6.0 ( 13687) CAU H 0.34 8.1 ( 18365) CGU R 0.19 12.7 ( 28781)
CUC L 0.13 14.9 ( 33870) CCC P 0.23 11.4 ( 25776) CAC H 0.66 15.5 ( 35229) CGC R 0.55 36.0 ( 81497)
CUA L 0.02 2.7 ( 6183) CCA P 0.15 7.1 ( 16042) CAA Q 0.24 10.9 ( 24676) CGA R 0.05 3.4 ( 7651)
CUG L 0.63 71.6 (162266) CCG P 0.50 24.3 ( 55081) CAG Q 0.76 35.1 ( 79469) CGG R 0.16 10.3 ( 23257)
AUU I 0.21 9.7 ( 22031) ACU T 0.10 4.7 ( 10676) AAU N 0.22 6.7 ( 15079) AGU S 0.09 5.2 ( 11881)
AUC I 0.74 34.4 ( 77875) ACC T 0.64 31.0 ( 70177) AAC N 0.78 23.3 ( 52817) AGC S 0.41 23.1 ( 52465)
AUA I 0.05 2.1 ( 4785) ACA T 0.08 3.6 ( 8205) AAA K 0.29 9.9 ( 22530) AGA R 0.02 1.2 ( 2645)
AUG M 1.00 23.1 ( 52389) ACG T 0.18 8.9 ( 20190) AAG K 0.71 24.5 ( 55631) AGG R 0.04 2.3 ( 5286)
GUU V 0.10 7.5 ( 16932) GCU A 0.11 12.1 ( 27420) GAU D 0.31 16.6 ( 37515) GGU G 0.20 16.4 ( 37240)
GUC V 0.29 21.4 ( 48528) GCC A 0.51 56.7 (128572) GAC D 0.69 36.5 ( 82685) GGC G 0.61 48.9 (110770)
GUA V 0.10 7.5 ( 16955) GCA A 0.12 13.7 ( 30985) GAA E 0.48 27.1 ( 61508) GGA G 0.04 3.3 ( 7395)
GUG V 0.50 36.2 ( 82121) GCG A 0.26 28.3 ( 64235) GAG E 0.52 29.6 ( 67176) GGG G 0.15 11.7 ( 26599)
Coding GC 61.88%
1st letter GC 65.07%
2nd letter GC 43.77%
3rd letter GC 76.81%
Genetic code 1: Standard
List of codon usage for each CDS
[CAUTION: The file is big (> 1000 entries).]
(format)
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