# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00041.fasta.huge -Q ../query/FLJ00041.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00041, 330 aa vs ./tmplib.10216 library 2210664 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.9095+/-0.00487; mu= 16.6376+/- 0.329 mean_var=149.5102+/-32.945, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.104891 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0269 ( 567 res) ha06751 ( 567) 105 27.0 3.4 KIAA1739 ( 963 res) pj00464 ( 963) 105 27.4 4.5 FLJ00011 ( 394 res) as00011 ( 394) 100 26.0 4.8 KIAA1498 ( 1731 res) hh01611 (1731) 106 27.9 5.5 FLJ00287 ( 186 res) sh02562 ( 186) 95 24.7 5.5 FLJ00201 ( 705 res) sj04110 ( 705) 97 25.9 8.8 KIAA1095 ( 1098 res) hk06736 (1098) 99 26.6 9 KIAA1064 ( 1315 res) hj05008s1 (1315) 99 26.7 9.9 KIAA0290 ( 906 res) ha06644 ( 906) 97 26.1 10 KIAA1429 ( 1795 res) fh08353 (1795) 99 26.9 12 KIAA1282 ( 1117 res) hh04440b(revised) (1117) 94 25.8 15 KIAA1158 ( 230 res) hj00081 ( 230) 86 23.5 16 FLJ00190 ( 521 res) sj02368 ( 521) 90 24.7 16 FLJ00411 ( 437 res) sf00010 ( 437) 89 24.4 16 KIAA0324 ( 2800 res) ee08846s1 (2800) 98 27.1 16 FLJ00055 ( 977 res) as00055 ( 977) 91 25.3 20 KIAA1249 ( 949 res) hh04184 ( 949) 90 25.1 21 KIAA0706 ( 1123 res) pj01355 (1123) 90 25.2 23 KIAA1886 ( 655 res) fk01837 ( 655) 87 24.4 24 KIAA1935 ( 441 res) fk03135(revised) ( 441) 85 23.8 24 KIAA1722 ( 1499 res) pf00674s1 (1499) 91 25.6 24 FLJ00221 ( 298 res) sj06160 ( 298) 83 23.2 24 KIAA1425 ( 495 res) hj01333(revised) ( 495) 85 23.9 26 KIAA1802 ( 821 res) fj21631 ( 821) 87 24.5 27 KIAA1071 ( 675 res) hj05664s2 ( 675) 86 24.3 27 KIAA0733 ( 698 res) hk03729s1 ( 698) 86 24.3 28 FLJ00315 ( 925 res) sh06842 ( 925) 87 24.6 29 KIAA0992 ( 772 res) hk07554 ( 772) 86 24.3 29 FLJ00341 ( 2760 res) sf00005 (2760) 92 26.1 30 KIAA1981 ( 862 res) fk03148(revised) ( 862) 86 24.4 31 KIAA0838 ( 677 res) hk03864 ( 677) 84 24.0 34 FLJ00198 ( 677 res) sj03504 ( 677) 84 24.0 34 KIAA0009 ( 319 res) ha00176 ( 319) 80 22.8 35 FLJ00406 ( 261 res) sj08464 ( 261) 79 22.5 35 KIAA0058 ( 181 res) ha01532 ( 181) 77 22.0 35 KIAA0730 ( 1004 res) hk03632 (1004) 85 24.4 37 KIAA1681 ( 1236 res) fh23697 (1236) 86 24.7 37 KIAA1217 ( 1339 res) fh03001s1 (1339) 86 24.7 39 KIAA1139 ( 1124 res) hk00330 (1124) 85 24.5 39 FLJ00160 ( 1696 res) sh06621 (1696) 87 25.1 39 KIAA1986 ( 334 res) pg00636 ( 334) 79 22.7 39 KIAA0924 ( 617 res) hh02883 ( 617) 82 23.6 39 FLJ00090 ( 770 res) as00090 ( 770) 83 23.9 40 KIAA1650 ( 797 res) hk02174 ( 797) 83 23.9 40 KIAA0639 ( 1835 res) fg02716y2 (1835) 87 25.1 41 KIAA1813 ( 673 res) ph00819b ( 673) 82 23.6 41 FLJ00051 ( 462 res) as00051 ( 462) 80 23.1 42 FLJ00073 ( 462 res) as00073 ( 462) 80 23.1 42 FLJ00245 ( 167 res) sj07825 ( 167) 75 21.6 42 KIAA1528 ( 740 res) hh03104(revised) ( 740) 82 23.7 43 >>KIAA0269 ( 567 res) ha06751 (567 aa) initn: 67 init1: 67 opt: 105 Z-score: 96.8 bits: 27.0 E(): 3.4 Smith-Waterman score: 105; 27.523% identity (45.872% similar) in 109 aa overlap (228-330:396-502) 200 210 220 230 240 250 FLJ000 VVYPSSSQESENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNIQ :. :: . .: . : : . : KIAA02 PPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQ 370 380 390 400 410 420 260 270 280 290 300 310 FLJ000 GIENPGFEASPPAQGIPEAKVR--HPLSYVAQRQPSESGRHLLSE----PSTPLSPPGPG : : :. :: .: .: :.. .: .: :: : : .:: ::.: KIAA02 G-EVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPP-SGLHPTPSTAPGPHVPLMPPSPP 430 440 450 460 470 480 320 330 FLJ000 DVFFPSLDPVPDSPNFEVI . .:. .: .. :: KIAA02 SQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATIL 490 500 510 520 530 540 >>KIAA1739 ( 963 res) pj00464 (963 aa) initn: 92 init1: 69 opt: 105 Z-score: 94.7 bits: 27.4 E(): 4.5 Smith-Waterman score: 105; 24.528% identity (48.585% similar) in 212 aa overlap (123-325:708-903) 100 110 120 130 140 150 FLJ000 RSSRGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLESASDHHGNFSITM : ..: .: : . ... :.: KIAA17 GICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSF---- 680 690 700 710 720 730 160 170 180 190 200 FLJ000 RNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVVY-PSSSQES---- : :. : .:. . .:. . : .. . .. :: :: . :. KIAA17 ----LYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPL 740 750 760 770 780 210 220 230 240 250 260 FLJ000 ENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNIQGIENPGFEAS ::. . ::. : .: .:: :.::.. .:. . . . . . .: : .: KIAA17 ENLGLVWLAVVA--LGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTS 790 800 810 820 830 840 270 280 290 300 310 320 FLJ000 PPAQGIPEA--KVRHPLSYVAQRQPSE-SGRHLLSEPST-PLSPPGPGDVFFPSLDPVPD :: . :: :. :..: . . : .:. : ::: :: .:. .:.: KIAA17 PPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPP-PG---IPG-QPLP- 850 860 870 880 890 900 330 FLJ000 SPNFEVI :: KIAA17 SPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEES 910 920 930 940 950 960 >>FLJ00011 ( 394 res) as00011 (394 aa) initn: 72 init1: 46 opt: 100 Z-score: 94.2 bits: 26.0 E(): 4.8 Smith-Waterman score: 100; 25.806% identity (52.419% similar) in 124 aa overlap (213-328:259-381) 190 200 210 220 230 FLJ000 MELQVQTGKDAPSNCVVYPSSSQESENITAAALATGACIVGILCLPL---ILLLVYKQRQ ::. .:: .:. . . : : .:: FLJ000 MKQSLGISISGGIESKVQPMVKIEKIFPGGAAFLSGALQAGFELVAVDGENLEQVTHQRA 230 240 250 260 270 280 240 250 260 270 280 290 FLJ000 AASNRRAQELVRMDSNIQGIENPGFEASP-PAQGIPEAKVRHPLSYVAQRQPSESG---R . . ::: . . .. :: : :... . : ... .:: ... FLJ000 VDTIRRAYRNKAREPMELVVRVPGPSPRPSPSDSSALTDGGLPADHLPAHQPLDAAPVPA 290 300 310 320 330 340 300 310 320 330 FLJ000 HLLSEPST-PLSPPGPGDVFFPSLDPVPDSPNFEVI : : :: : : .:: . .. :. .:.: :: .. FLJ000 HWLPEPPTNPQTPPTDARLLQPTPSPAP-SPALQTPDSKPAPSPRIP 350 360 370 380 390 >>KIAA1498 ( 1731 res) hh01611 (1731 aa) initn: 76 init1: 76 opt: 106 Z-score: 93.1 bits: 27.9 E(): 5.5 Smith-Waterman score: 106; 31.667% identity (60.000% similar) in 60 aa overlap (271-329:4-59) 250 260 270 280 290 300 FLJ000 ASNRRAQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSE .: .:.: : ::. . : . . KIAA14 IMHHGTGPQNVQHQL----QRSRACPGSEGEEQ 10 20 310 320 330 FLJ000 PSTPLSPPGPGDVFFPSLDP-VPDSPNFEVI :. : ::.:. : :: .: .:.::.... KIAA14 PAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQ 30 40 50 60 70 80 >>FLJ00287 ( 186 res) sh02562 (186 aa) initn: 73 init1: 48 opt: 95 Z-score: 93.1 bits: 24.7 E(): 5.5 Smith-Waterman score: 95; 35.593% identity (55.932% similar) in 59 aa overlap (268-324:36-94) 240 250 260 270 280 290 FLJ000 RQAASNRRAQELVRMDSNIQGIENPGFEASPPAQG-IPEAKVRHPL-SYVAQRQPSESGR ::..: . .: :: : .:.: : FLJ002 LPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSNQVSWPLWEDVKTPEPGEPGS 10 20 30 40 50 60 300 310 320 330 FLJ000 HLLSEPSTPLSPPGPGDVFFPSLDPVPDSPNFEVI : . : ::.::. : . : ::. .: FLJ002 PLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLHSPLSLPLSKLPPLYL 70 80 90 100 110 120 >>FLJ00201 ( 705 res) sj04110 (705 aa) initn: 104 init1: 68 opt: 97 Z-score: 89.4 bits: 25.9 E(): 8.8 Smith-Waterman score: 101; 32.432% identity (55.405% similar) in 74 aa overlap (262-328:119-189) 240 250 260 270 280 FLJ000 LLVYKQRQAASNRRAQELVRMDSNIQGIENPGF----EASPPAQGIPEAKVRHPLSYVAQ ::: .:.:: :.: .:: : . . FLJ002 PRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPP--GLP-GKVGPPGQPGLR 90 100 110 120 130 140 290 300 310 320 330 FLJ000 RQPSESGRHLLSEPSTPLSPPGPGDVFFPS---LDPVPDSPNFEVI .:. : . : : : . :::. . .:. . :: :.:. FLJ002 GEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRG 150 160 170 180 190 200 FLJ002 LKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPR 210 220 230 240 250 260 >>KIAA1095 ( 1098 res) hk06736 (1098 aa) initn: 76 init1: 45 opt: 99 Z-score: 89.2 bits: 26.6 E(): 9 Smith-Waterman score: 99; 22.993% identity (50.365% similar) in 274 aa overlap (53-312:689-948) 30 40 50 60 70 80 FLJ000 PTALEAGSWRWGSLLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPVDKG : ::::.:: : : : : . KIAA10 SADCTDADYLGIPVDECERFRELLELKCQVKSATPYGLYY-PSGP---LDAGKSDPESVD 660 670 680 690 700 710 90 100 110 120 130 FLJ000 HDVTFYKTWYRSSRGEVQTCSERRPIRNLTFQ---DLHLHHGGHQAANTSHDLAQRHGLE ... . . :: . : . . . ...: : . ::..: . ::: :. .:: : KIAA10 KELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWMLHNSGFRNYNTSIDV-RRHELS 720 730 740 750 760 770 140 150 160 170 180 190 FLJ000 SASDHHGNFSITMRNLTLLDSGLYCC---LVVEIRHHHSEHRVHGAMELQVQTGKDAPSN . .. . . . . ..: : :..:: .: .:. : .. ... : .. KIAA10 DITELPEKSDKD--SSSAYNTGESCRSTPLTLEISPDNSLRRA--AEGISCPSSEGAVGT 780 790 800 810 820 200 210 220 230 240 250 FLJ000 CVVYPSSSQESENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNI .: .:.. .:: .:. . : . : .: ...:::.. : . KIAA10 TEAYGPASKNLLSITEDP-EVGTPTYS----PSLKELDPNQPLESKERRASDGSRSPTPS 830 840 850 860 870 880 260 270 280 290 300 FLJ000 QGIEN---PGFEASPPAQGIPEAKVRHPLSY---VAQRQPSESGRHLLSEPST--PLSPP : . . :... :: .. :...: :: . :.. : .. .: : :: : KIAA10 QKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLSSP 890 900 910 920 930 940 310 320 330 FLJ000 GPGDVFFPSLDPVPDSPNFEVI :.. KIAA10 TPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSEMKMGRY 950 960 970 980 990 1000 >>KIAA1064 ( 1315 res) hj05008s1 (1315 aa) initn: 60 init1: 60 opt: 99 Z-score: 88.5 bits: 26.7 E(): 9.9 Smith-Waterman score: 99; 28.455% identity (47.154% similar) in 123 aa overlap (217-325:466-579) 190 200 210 220 230 FLJ000 VQTGKDAPSNCVVYPSSSQESENITAAALATGACIVGILCL----PL------ILLLVYK :: :: : :. :: .: . KIAA10 LCKFYITGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLA 440 450 460 470 480 490 240 250 260 270 280 290 FLJ000 QRQAASNRRAQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRH . :. . .:. .. . ::: :: . ::. :. . : : : : .:: KIAA10 DDAEAGAEDEKEVEELKK--QGI-NP-LPKPPPGVGLLPTPPRPPGP---QAPTSPNGRP 500 510 520 530 540 300 310 320 330 FLJ000 LLS----EPSTPLSPPGPGDVFFPSLDPVPDSPNFEVI . . : : :::: .. .: .:. :: KIAA10 MQGGPPPPPPPPPPPPGPPQMPMPVHEPL--SPQQLQQQDMYNKKIPSLFEIVVRPTGQL 550 560 570 580 590 600 KIAA10 AEKLGVRFPGPGGPPGPMGPGPNMGPPGPMGGPMHPDMHPDMHPDMHPDMHADMHADMPM 610 620 630 640 650 660 >>KIAA0290 ( 906 res) ha06644 (906 aa) initn: 97 init1: 67 opt: 97 Z-score: 88.4 bits: 26.1 E(): 10 Smith-Waterman score: 97; 29.870% identity (53.247% similar) in 77 aa overlap (255-325:465-541) 230 240 250 260 270 280 FLJ000 LCLPLILLLVYKQRQAASNRRAQELVRMDSNIQGIENPGFEASP-P-AQGIPEAKVRHPL .. : . :: .:: : ... :: : KIAA02 TSSCAERLQSEEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGL 440 450 460 470 480 490 290 300 310 320 330 FLJ000 SYVAQRQPSESGRHLLSEPSTPLSPPG----PGDVFFPSLDPVPDSPNFEVI . .. :. : . .:.:: :::. : .. :.:::: KIAA02 DSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQPLASSPGPWGLE 500 510 520 530 540 550 KIAA02 ALAGGDLMPAPADPTAREGLAAPPRRLRSRKVSCPLTRSNGDLSRSLSPSPLGSSAASTA 560 570 580 590 600 610 >>KIAA1429 ( 1795 res) fh08353 (1795 aa) initn: 82 init1: 82 opt: 99 Z-score: 87.3 bits: 26.9 E(): 12 Smith-Waterman score: 99; 31.148% identity (45.902% similar) in 61 aa overlap (262-322:139-198) 240 250 260 270 280 290 FLJ000 LLVYKQRQAASNRRAQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPS : :: : : : :.: .... . KIAA14 LVLRGWYNCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLK-RNPKHADGEKEDQ 110 120 130 140 150 160 300 310 320 330 FLJ000 ESGRHLLSEPSTPLSPPGPGDVFFPSLDPVPDSPNFEVI .: .: : .:::: :::: KIAA14 FNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVP 170 180 190 200 210 220 KIAA14 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 230 240 250 260 270 280 330 residues in 1 query sequences 2210664 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:30:33 2009 done: Fri Feb 27 10:30:33 2009 Total Scan time: 0.460 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]