BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149471.17 - phase: 0 /pseudo
(1391 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis ... 1058 0.0
UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana] 1053 0.0
UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidop... 1051 0.0
UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidop... 1034 0.0
UniRef100_O23588 Retrotransposon like protein [Arabidopsis thali... 959 0.0
UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Sol... 951 0.0
UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidop... 949 0.0
UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana] 946 0.0
UniRef100_Q9LFY6 T7N9.5 [Arabidopsis thaliana] 940 0.0
UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis ... 930 0.0
UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsi... 918 0.0
UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana] 872 0.0
UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides] 815 0.0
UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis ... 795 0.0
UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum] 790 0.0
UniRef100_O23741 SLG-Sc and SLA-Sc genes and Melmoth retrotransp... 751 0.0
UniRef100_Q94LA8 Polyprotein, putative [Arabidopsis thaliana] 714 0.0
UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa] 696 0.0
UniRef100_Q5XWK9 Gag-pol polyprotein-like [Solanum tuberosum] 696 0.0
UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidop... 675 0.0
>UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 1058 bits (2735), Expect = 0.0
Identities = 569/1430 (39%), Positives = 841/1430 (58%), Gaps = 97/1430 (6%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNK+ F++G +P P D + W RCN +V+SW++NSV+ I ++I+ ++ A E+
Sbjct: 96 SLYAKNKIAFVDGTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEI 155
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF + R L I +L+QG+ S+ DY+T +K LW++L + C
Sbjct: 156 WKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDYYTALKTLWDDLDGASCVSTCKNCT 215
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C AS + +I++FL+GLN+ +S +R+Q+++ +P L ++Y+L+ Q+ S
Sbjct: 216 CCIATASMI-----EHSKIVKFLSGLNESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQR 270
Query: 184 ------ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCY 237
+ S+ +VS S Q + + F +QPKP C+ T H D CY
Sbjct: 271 NIVTMPTNASTFNVSAPQSDQFAVNLAKSFG------TQPKPKVQCSHCGYTGHNADTCY 324
Query: 238 LKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQA-- 295
HGYP K + + E + ++ S G + +V+L + ++
Sbjct: 325 KIHGYPVGFKHKDKKTVTPSEKPKSVVANLALTDGKVSVTQGIGPDGIVELVGSMSKSQI 384
Query: 296 ------------NLVVPASSSSQASSNHISANPLISTTISAP------ESSSAGIIPKPS 337
N P + +S AS+N+ + + + S +S+ + +
Sbjct: 385 QDVIAYFSTQLHNPAKPITVASFASTNNDNGSTFTGISFSPSTLRLLCSLTSSKKVLSLN 444
Query: 338 YWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYS 397
W++DSGA H+S + + F S V+LP + V + G + SN L +VLY
Sbjct: 445 TWIIDSGATHHVSYDRNLFESLSDGLSNEVTLPTGSNVKIAGIGVIKLNSNLTLKNVLYI 504
Query: 398 PAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSS--CSS 455
P F NL+SV++ + + ++F C+IQD + + IG Q+ GLY SS C+S
Sbjct: 505 PEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSVECTS 564
Query: 456 NSVFSSVSHKS-CNVVATISCNSSSSIPSNALWHFRLGHLSHQR---LHSMSLLYPNIIS 511
+ SSV+ K CN V +ALWH RLGH S+++ LH + +
Sbjct: 565 VDINSSVTEKQYCNAVV-----------DSALWHSRLGHPSYEKNDVLHDVL----GLPK 609
Query: 512 SNNKDV--CDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVD 569
N +D+ C +C AK KHL F S + + F+L+H+D WGP + + G++YFLTIVD
Sbjct: 610 RNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVD 669
Query: 570 DHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIH 629
D+SR WV L+K+K +V +F+ M++TQ+ K +R+DN PE Y + GII
Sbjct: 670 DYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELRFEALYQAKGIIS 729
Query: 630 QKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHN 689
SC ETPQQN VERKHQHILNV RAL+F++ +P FW IL AVFLINR+PTP+L N
Sbjct: 730 YHSCPETPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSN 789
Query: 690 QSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDI 749
+SP+ +LH ++P KVFGCLCY ST R K PRAR +FLGY SG+KG+ L D+
Sbjct: 790 KSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDL 849
Query: 750 QSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILP 809
++ I +SRHV F+ET P+ T + P DV + P++
Sbjct: 850 ETNTIHISRHVVFYETVFPF--TDKTIIPR----------DVFDLVDPVHENI------- 890
Query: 810 PSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNNI----HTSPYPINNYISHHN 865
+PP P + +S R++ P YLQDY CN + YP+N YI++
Sbjct: 891 ENPPSTSESAPKV--------SSKRESRPPGYLQDYFCNAVPDVTKDVRYPLNAYINYTQ 942
Query: 866 LSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIG 925
LS +++++ +++ EP +YA+A K W AM++E+ ALE T TW + LP KPIG
Sbjct: 943 LSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQGKKPIG 1002
Query: 926 CRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNW 985
C+W++KVK +ADGS+ER KARLVAKGY Q EGLDY+DT+SPVAK+TT++ ++++++I W
Sbjct: 1003 CKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSVAAIKEW 1062
Query: 986 HLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYE 1040
LHQLD++NAFL+GDL+E++YM +PPG + N V KLQKSLYGLKQASR+WY
Sbjct: 1063 SLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQASRQWYL 1122
Query: 1041 KLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASF 1100
K +S L + ++ +DH+LF + + ++ LLVYVDDI+IAG++ +K L +F
Sbjct: 1123 KFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKKDLAKAF 1182
Query: 1101 KIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDS 1160
K++DLG +KYFLG+E+A +K GIS+CQRKY ++LL D+G + +P + P + S+KL Q +
Sbjct: 1183 KLRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQHN 1242
Query: 1161 SPSYADIPS-YRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGC 1219
D P YRRLVG+L+YL TRPDIT+ +L QF S P +H AA +V+ YLKG
Sbjct: 1243 DEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGT 1302
Query: 1220 PGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSS 1279
G GLF+ S + L+ ++DADW C+D+RRS SG C FLG+SLISW++KKQ S SS+
Sbjct: 1303 IGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKSKKQNMASSSSA 1362
Query: 1280 EAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEID 1339
E+EYRA+A + E+ W++ LL + + K L+CD+ +A+HIA N VFHERTKH+E D
Sbjct: 1363 ESEYRAMAMGSREIAWLVKLLAEFQVKQTKPVPLFCDSTAAIHIANNAVFHERTKHIEND 1422
Query: 1340 CHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIY 1389
CHI R++++ G+LK + V + Q+AD TK L P FN L+ KM L++IY
Sbjct: 1423 CHITRDRIEQGMLKTMHVDTTSQLADVLTKPLFPTLFNSLIGKMSLLSIY 1472
>UniRef100_O04543 F20P5.25 protein [Arabidopsis thaliana]
Length = 1315
Score = 1053 bits (2723), Expect = 0.0
Identities = 576/1406 (40%), Positives = 838/1406 (58%), Gaps = 117/1406 (8%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
S+ KNKLGF++G IP PD DD W RCN +V+SWL+NSVS I +I+++ TA +
Sbjct: 4 SIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAI 63
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF K R+ LR I++L+QG+ + Y T + LWEEL S + +P
Sbjct: 64 WKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVPR----- 118
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
+ I R ++++ FL GLND + VR+Q+L+ LPSL++V++++ Q+E+
Sbjct: 119 -----TVEDLLIERETNRVIDFLMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDETQR 173
Query: 184 ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYP 243
++ S + SS+ S+ + Q K +C++ +R H D CY KHGYP
Sbjct: 174 SARISTTPGMTSSV-FPVSNQSSQSALNGDTYQKKERPVCSYCSRPGHVEDTCYKKHGYP 232
Query: 244 NVNKAQ-----PRVNA---VTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQA 295
K++ P ++A + E+V TS S G + Q+ QL S L +
Sbjct: 233 TSFKSKQKFVKPSISANAAIGSEEVVNNTSVSTGD---------LTTSQIQQLVSFL--S 281
Query: 296 NLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSF 355
+ + P S+ Q + IS +S+ SSS+ + P
Sbjct: 282 SKLQPPSTPVQPEVHSIS--------VSSDPSSSSTVCP--------------------- 312
Query: 356 FSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLS 415
+G+V + L+ VL+ P F NL+SV+ L +S+
Sbjct: 313 -----------------------ISGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMG 349
Query: 416 YSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISC 475
+ F C++QD M+G+ KQ+ LY S S SS++
Sbjct: 350 CRIWFDETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSIT------------ 397
Query: 476 NSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-CDLCHFAKHKHLPFNSS 534
+S+ S+ LWH RLGH S Q+L MS L NN D C +CH +K KHLPF S
Sbjct: 398 --VASVTSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSH 455
Query: 535 ISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFI 594
+ +S F+L+H+D WGP S+ + G+RYFLTIVDD+SR WV LL++K++V T + F+
Sbjct: 456 NNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFV 515
Query: 595 TMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVG 654
TM++ QF T K +R+DN PE + FY S GI+ SC ETPQQN VERKHQHILNV
Sbjct: 516 TMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVA 575
Query: 655 RALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCY 714
R+L FQS +P S+W IL AV+LINR+P PIL ++ P+ VL +P + KVFGCLCY
Sbjct: 576 RSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCY 635
Query: 715 ASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSL 774
AST R K PRA+ F+GY SGFKG+ L D+++ I VSRHV FHE P+ + L
Sbjct: 636 ASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDL 695
Query: 775 STTPNWEYFSSSNFS-----DVSNQPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPAS 829
S +F N + S+ P +S + ++ ILP + P N P P +
Sbjct: 696 SQEEQ-NFFPDLNPTPPMQRQSSDHVNPSDSSSSVE-ILPSANPTNNVPEPSV------- 746
Query: 830 RTSTRQTTTPSYLQDYVCNNIHTS-PYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAE 888
+TS R+ P+YLQDY C+++ +S P+ I ++S+ +++ Y +F+ L T EP +Y E
Sbjct: 747 QTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTE 806
Query: 889 ASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLV 948
A K W+ AM E LE T TW++ LP++ + IGCRWI+K+KY++DGS+ER+KARLV
Sbjct: 807 AEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLV 866
Query: 949 AKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYML 1008
A+GY Q EG+DY +T+SPVAKL +++L++ +++ L QLD++NAFL+GDL E++YM
Sbjct: 867 AQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMR 926
Query: 1009 IPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVK 1063
+P G S + PN VC+L+KSLYGLKQASR+WY K +S L +IQ+ DH+ F+K
Sbjct: 927 LPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLK 986
Query: 1064 KTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGI 1123
+ F +LVY+DDIIIA ++ +KS + + FK++DLG+LKYFLG+E+ S GI
Sbjct: 987 ISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGI 1046
Query: 1124 SLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTT 1183
+ QRKY LDLL ++G + KP S P D S+ DS + ++ YRRL+GRL+YLN T
Sbjct: 1047 HISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNIT 1106
Query: 1184 RPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWA 1243
RPDITF +L+QF P +AH A ++L+Y+KG G+GLF+ S + L+ +++AD+
Sbjct: 1107 RPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYN 1166
Query: 1244 GCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDI 1303
C D+RRS SG C FLG+SLI W+++KQ VS+SS+EAEYR+L+ AT EL W+ L+++
Sbjct: 1167 SCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKEL 1226
Query: 1304 HISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQV 1363
+ K +L+CDN++A+HIA N VFHERTKH+E DCH VRE++ G+ +L ++++ Q+
Sbjct: 1227 QVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQI 1286
Query: 1364 ADFFTKALLPKPFNILLSKMGLINIY 1389
AD FTK L P F+ L+SKMGL+NI+
Sbjct: 1287 ADPFTKPLYPSHFHRLISKMGLLNIF 1312
>UniRef100_Q9XII7 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 1051 bits (2719), Expect = 0.0
Identities = 581/1416 (41%), Positives = 838/1416 (59%), Gaps = 89/1416 (6%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNK GFI+G + P DLN W RCN +V+SWL+NSVS I ++I+ + A ++
Sbjct: 94 SLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDI 153
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF+ + R NL I + +QG+ S+ +Y+T +K LW++L S +
Sbjct: 154 WRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDSTEALDE----- 208
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
PC C + + + +I++FL GLN+ ++IVR Q++ LPSL +VY ++ Q+ S
Sbjct: 209 PCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGEVYHILDQDNSQQ 268
Query: 184 ASLSSLSVSDDSSIQINASDVRK---------FQGRGKNPSQPKPTRLCTFSNRTNHTVD 234
S S++ V+ ++ Q+ S++ + + G N +P +C+F NR H +
Sbjct: 269 -SFSNV-VAPPAAFQV--SEITQSPSMDPTVCYVQNGPNKGRP----ICSFYNRVGHIAE 320
Query: 235 FCYLKHGYPN--VNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAG-FSQEQLVQLASL 291
CY KHG+P K + + + A + S +S S G S+EQL Q ++
Sbjct: 321 RCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSLESMVGNLSKEQLQQFIAM 380
Query: 292 LQQANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSY------WLLDSGA 345
P S+ + AS+ S + + S S GI+ + W++DSGA
Sbjct: 381 FSSQLQNTPPSTYATAST---SQSDNLGICFSPSTYSFIGILTVARHTLSSATWVIDSGA 437
Query: 346 NEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLI 405
H+S + S FSS V+LP V + GT+ + L +VL+ P F NLI
Sbjct: 438 THHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLI 497
Query: 406 SVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHK 465
S++ L + + + F C IQD + +M+G +++ LY V +
Sbjct: 498 SISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLY------------LLDVGDQ 545
Query: 466 SCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMS-LLYPNIISSNNKDVCDLCHFA 524
S +V A + + +WH RLGH S QRL ++S L + D C +CH A
Sbjct: 546 SISVNAVVDIS---------MWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLA 596
Query: 525 KHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKA 584
K + L F +S F+LLH+D+WGP S+ +V G++YFLTIVDDHSR W+ LLK+K+
Sbjct: 597 KQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKS 656
Query: 585 EVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNGRVE 644
EV T FI ++ Q+ + K +R+DN PE ++FYA GI+ SC ETP+QN VE
Sbjct: 657 EVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTSFYAEKGIVSFHSCPETPEQNSVVE 716
Query: 645 RKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALN 704
RKHQHILNV RAL+FQS++P S W +L AVFLINR P+ +L N++PY +L P
Sbjct: 717 RKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYE 776
Query: 705 LFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHE 764
+ FGCLCY+ST R K QPR+R +FLGY SG+KG+ L D++S +F+SR+V FHE
Sbjct: 777 QLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHE 836
Query: 765 TFLPYP-----HTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPPP 819
P +SL SS SD ++ P+ + P+ I D+ P
Sbjct: 837 EVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSL--PSQISDL-----------P 883
Query: 820 PPIPVVSPASRTSTRQTTTPSYLQDYVCNNIHTS-PYPINNYISHHNLSNNYSSFVMSLH 878
P I +S R P++L DY CN + + YPI++ IS+ +S ++ ++ ++
Sbjct: 884 PQI--------SSQRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNIT 935
Query: 879 TTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADG 938
P +YAEA W +A+ E+ A+EKT TW++ LP K +GC+W++ +K+ ADG
Sbjct: 936 KIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADG 995
Query: 939 SIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLH 998
++ER+KARLVAKGY Q EGLDY DT+SPVAK+TTI+L++ +S+ W L QLDV+NAFL+
Sbjct: 996 NLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLN 1055
Query: 999 GDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQ 1053
G+L+E+++M IP G K N V +L++S+YGLKQASR+W++K +S L + +
Sbjct: 1056 GELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKK 1115
Query: 1054 ASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLG 1113
DH+LF+K F I+LVYVDDI+IA S + LD FK++DLG LKYFLG
Sbjct: 1116 THGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLG 1175
Query: 1114 IEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRL 1173
+EVA + GIS+CQRKY L+LL +G + KPVS P ++K+ +D DI YRR+
Sbjct: 1176 LEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRI 1235
Query: 1174 VGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSIN 1233
VG+L+YL TRPDITF +L QF S P H TAA RVL+Y+KG G+GLF+ +S +
Sbjct: 1236 VGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLT 1295
Query: 1234 LQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCEL 1293
L+GF+D+DWA C D+RRS + F+G+SLISWR+KKQ TVSRSS+EAEYRALA ATCE+
Sbjct: 1296 LKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEM 1355
Query: 1294 QWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILK 1353
W+ LL + S P +P+LY D+ +A++IA NPVFHERTKH+++DCH VRE++ G LK
Sbjct: 1356 VWLFTLLVSLQAS-PPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELK 1414
Query: 1354 LLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIY 1389
LL V ++DQVAD TK L P F L SKM ++NI+
Sbjct: 1415 LLHVRTEDQVADILTKPLFPYQFEHLKSKMSILNIF 1450
>UniRef100_Q9SIM3 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 1034 bits (2674), Expect = 0.0
Identities = 580/1418 (40%), Positives = 833/1418 (57%), Gaps = 90/1418 (6%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNKLGF++G +P P D N W RCN +V+SWL+NSVS I ++I+ + A ++
Sbjct: 98 SLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDI 157
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL +RF+ + R NL I +L+QG+ S+ +Y+T +K LW++L S + +
Sbjct: 158 WRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLDSTEALDD----- 212
Query: 124 PCRCEASKVAKIHRNEDQ--IMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEES 181
PC C K ++++ ++ IM+FL GLN+ ++IVR Q++ LPSL +VY ++ Q+ S
Sbjct: 213 PCTC--GKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLAEVYHILDQDNS 270
Query: 182 NN------ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDF 235
A ++ VS+ S I + ++ Q P++ +PT C+F NR H +
Sbjct: 271 QKGFFNVVAPPAAFQVSEVSHSPITSPEIMYVQS---GPNKGRPT--CSFCNRVGHIAER 325
Query: 236 CYLKHGYP-------NVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQL 288
CY KHG+P + P+ AV + V GQ + + N FS +Q+ L
Sbjct: 326 CYKKHGFPPGFTPKGKSSDKPPKPQAVAAQ-VTLSPDKMTGQLETLAGN--FSPDQIQNL 382
Query: 289 ASLLQ---QANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIP------KPSYW 339
+L Q +V P ++SSQ ++ + S GI+ W
Sbjct: 383 IALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAVSHNSLSSDTW 442
Query: 340 LLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPA 399
++DSGA H+S + F + +V+LP V + GTV + L +VL+ P
Sbjct: 443 VIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQNVLFIPE 502
Query: 400 FTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVF 459
F NLIS++ L L + F + C IQD +G K++ LY S +
Sbjct: 503 FRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQSPAI---- 558
Query: 460 SSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-C 518
S N V +S +WH RLGH S RL S+S + N K C
Sbjct: 559 ------SVNAVVDVS-----------VWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYC 601
Query: 519 DLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVI 578
+CH AK K L F S+ + ++ FELLH+D+WGP S+ +V G++YFLTIVDDHSR W+
Sbjct: 602 HVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIY 661
Query: 579 LLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQ 638
LLKSK++V T FI +++ Q+ K +R+DN E + FY + GI+ SC ETP+
Sbjct: 662 LLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPE 721
Query: 639 QNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHH 698
QN VERKHQHILNV RAL+FQS + +W +L AVFLINR P+ +L N++P+ VL
Sbjct: 722 QNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTG 781
Query: 699 QLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSR 758
+LP + K FGCLCY+ST R K PR+R +FLGY GFKG+ L D++S + +SR
Sbjct: 782 KLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISR 841
Query: 759 HVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPP 818
+V FHE P + S T SDV P++S I LP
Sbjct: 842 NVEFHEELFPLASSQQSAT---------TASDVFTPMDPLSSGNSITSHLPS-------- 884
Query: 819 PPPIPVVSPASRTSTRQTTT-PSYLQDYVCNNIHTSP-YPINNYISHHNLSNNYSSFVMS 876
P +SP+++ S R+ T P++LQDY C ++ +PI++ +S+ +S ++ ++ +
Sbjct: 885 ----PQISPSTQISKRRITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINN 940
Query: 877 LHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHA 936
+ P+SY EA W A+ E+ A+E+T TW++ LP K +GC+W++ VK+HA
Sbjct: 941 ISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHA 1000
Query: 937 DGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAF 996
DGS+ER KAR+VAKGY Q EGLDY +T+SPVAK+ T++L++ +S+ W+L+QLD++NAF
Sbjct: 1001 DGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAF 1060
Query: 997 LHGDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHY 1051
L+GDL+E +YM +P G K PN VC+L+KS+YGLKQASR+W+ K ++ L +
Sbjct: 1061 LNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGF 1120
Query: 1052 IQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYF 1111
+ DH+LFV+ S F +LLVYVDDI+IA + + L ASFK+++LG LKYF
Sbjct: 1121 EKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYF 1180
Query: 1112 LGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYR 1171
LG+EVA + GISL QRKY L+LL + +D KP S P +I+L ++ D YR
Sbjct: 1181 LGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYR 1240
Query: 1172 RLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSS 1231
RLVG+L+YL TRPDITF +L QF S P AH A +VL+Y+KG G+GLF+
Sbjct: 1241 RLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDD 1300
Query: 1232 INLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATC 1291
+ L+G++DADW C D+RRS +G F+G+SLISWR+KKQ TVSRSS+EAEYRALA A+C
Sbjct: 1301 LTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASC 1360
Query: 1292 ELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGI 1351
E+ W+ LL + + +P+LY D+ +A++IA NPVFHERTKH+EIDCH VREK+ G
Sbjct: 1361 EMAWLSTLLLALRVH-SGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQ 1419
Query: 1352 LKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIY 1389
LKLL V ++DQVAD TK L P F LLSKM + NI+
Sbjct: 1420 LKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNIF 1457
>UniRef100_O23588 Retrotransposon like protein [Arabidopsis thaliana]
Length = 1433
Score = 959 bits (2480), Expect = 0.0
Identities = 547/1431 (38%), Positives = 795/1431 (55%), Gaps = 137/1431 (9%)
Query: 1 VQRSLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTA 60
++ SL KNKL F++G +P PD D W RCN +V++WL+N V+
Sbjct: 97 MRMSLDAKNKLSFVDGSLPRPDVSDRMFKIWSRCNSMVKTWLLNVVT------------- 143
Query: 61 FEVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCS 120
E+W+DL RF + R L +I+ LKQG+ + Y+T+ K LWE+LA+ R +
Sbjct: 144 -EMWNDLFSRFRVSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLANTRVLT--- 199
Query: 121 CIHPCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEE 180
+ C CE K +I+QFL GLND F+ +R Q+L + P P L ++Y+++ Q+E
Sbjct: 200 -VRKCNCEHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEIYNMLDQDE 258
Query: 181 SNNASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKH 240
S + + ++ Q+ AS + Q S KP C++ N+ H VD CY KH
Sbjct: 259 SQRLVGNPTLSNPTAAFQVQASPIIDSQVNMAQGSYKKPK--CSYCNKLGHLVDKCYKKH 316
Query: 241 GYPNVNKAQPRVNAVTHEDVDAGTSSSIGQ--GSSTSSNAGFSQEQLVQLASLLQQANLV 298
GYP +K + + ++ + + + T S FS +Q+ + S L +
Sbjct: 317 GYPPGSK-WTKGQTIGSTNLASTQLQPVNETPNEKTDSYEEFSTDQIQTMISYLSTKLHI 375
Query: 299 VPASSSSQASSNHISANP-----------------------LISTTISAPESSSAGIIPK 335
AS SS ISA+P LIS+ P S G
Sbjct: 376 ASASPMPTTSSASISASPSVPMISQISGTFLSLFSNAYYDMLISSVSQEPAVSPRG---- 431
Query: 336 PSYWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVL 395
W++DSGA H++ N + +F + +V LPN V + G + + L +VL
Sbjct: 432 ---WVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLHNVL 488
Query: 396 YSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSS 455
Y P F NLIS +L + L MIG Q+ LY
Sbjct: 489 YIPEFKFNLIS--ELTKEL--------------------MIGRGSQVGNLYVL-----DF 521
Query: 456 NSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNK 515
N +VS K + SS + + WH RLGH ++ ++ +S + + NK
Sbjct: 522 NENNHTVSLKGTTSMCPEFSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINK 581
Query: 516 D------VCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVD 569
+ VC +CH +K KHL F S + S F+L+H+D WGP S+ +
Sbjct: 582 EHSPVCHVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHIDTWGPFSVPT------------ 629
Query: 570 DHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIH 629
+ W+ LLK+K++V FI M+ TQ+ K +R+DN E + +A+HGI+
Sbjct: 630 --NDATWIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHELKFTDLFAAHGIVA 687
Query: 630 QKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHN 689
SC ETP+QN VERKHQHILNV RALLFQS +P FW +L AVFLINR+PTP+L+N
Sbjct: 688 YHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNN 747
Query: 690 QSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDI 749
+SPY L + PA K FGCLCY+ST R K +PRAR +FLGY G+KG+ L DI
Sbjct: 748 KSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDI 807
Query: 750 QSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDI-L 808
++ + +SRHV FHE P+ SS+ D+ + + PA DD+ L
Sbjct: 808 ETHAVSISRHVIFHEDIFPF-------------ISSTIKDDIKDFFPLLQFPARTDDLPL 854
Query: 809 PPSPPINPPPPPPIP---VVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINNYISHHN 865
+ I+ P + + P S RQ P +LQD+ C N T P+ H
Sbjct: 855 EQTSIIDTHPHQDVSSSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPF--------HA 906
Query: 866 LSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIG 925
NN ++ V+ P+ Y+EA W AM+ E+ A+ +T TW +V LP N K IG
Sbjct: 907 FINNITNAVI-------PQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIG 959
Query: 926 CRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNW 985
C+W++ +K++ADGSIER+KARLVAKGY Q EGLDY +T+SPVAKLT++R+++ L++ W
Sbjct: 960 CKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKW 1019
Query: 986 HLHQLDVNNAFLHGDLQEDVYMLIPPGI-----KSNKPNQVCKLQKSLYGLKQASRKWYE 1040
+HQLD++NAFL+GDL E++YM IPPG ++ P+ +C+L KS+YGLKQASR+WY
Sbjct: 1020 SVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYL 1079
Query: 1041 KLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASF 1100
KL++ L + ++++DH+LF+K + +LVYVDDI+I +S + L + F
Sbjct: 1080 KLSNTLKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYF 1139
Query: 1101 KIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDS 1160
K++DLG KYFLGIE+A S+ GIS+CQRKY L+LL+ +G + SKP S P D S+KL+++
Sbjct: 1140 KLRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKED 1199
Query: 1161 SPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCP 1220
D SYR+LVG+L+YL TRPDI + L QF PT H +A +VLRYLKG
Sbjct: 1200 GVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTV 1259
Query: 1221 GRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSE 1280
G+GLF+ + +L+G++D+D+ C D+RR ++ C F+G+ L+SW++KKQ TVS S++E
Sbjct: 1260 GQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAE 1319
Query: 1281 AEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDC 1340
AE+RA++ T E+ W+ L D + LYCDN +ALHI N VFHERTK +E+DC
Sbjct: 1320 AEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDC 1379
Query: 1341 HIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
+ RE V++G LK + V + +QVAD TKA+ P F+ L+ KMG+ NI+ P
Sbjct: 1380 YKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCNIFAP 1430
>UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Solanum tuberosum]
Length = 1476
Score = 951 bits (2458), Expect = 0.0
Identities = 574/1485 (38%), Positives = 817/1485 (54%), Gaps = 155/1485 (10%)
Query: 1 VQRSLGTKNKLGFINGVIPIPD-ADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDT 59
+Q +L TKNK+GFI+G + D ++L + W+RCN +V SWL+N+VS + I+F
Sbjct: 34 MQLTLLTKNKMGFIDGSLRRDDFKEELEKKQWDRCNAMVLSWLMNNVSTDLVSGILFRSN 93
Query: 60 AFEVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNC 119
A VW+DL+ERF KV+ RI +L I QG V Y++++K LW+E S P P+C
Sbjct: 94 ATLVWNDLKERFDKVNMSRIFHLHKAIVTHVQGVSPVSVYYSKLKDLWDEYDSILPPPSC 153
Query: 120 SCIHPCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQE 179
CE S +++QFL GLND + R+Q+L+++P PS+N+ Y+++VQ+
Sbjct: 154 D------CEKSVDYTDSMLRQKLLQFLMGLNDNYGQARSQILMMNPSPSVNQCYAMIVQD 207
Query: 180 ESNNASLSSLSVSDDSSIQINASDVRKF-----QGRGKNPSQPKPTRL------------ 222
ES + S D +++ + F QG G S R
Sbjct: 208 ESQRSLSGSGQTIDPTALFTHRPGGSGFGSQGSQGSGNGSSNGNSHRFHKGGNIYCDFCN 267
Query: 223 --------------CTFSNRTNHTVDFCYLKHGYPNVNKAQPRVNAVT--------HEDV 260
CT N HT D CY GYP K + + N VT H +
Sbjct: 268 MKGHIRANCNKLKHCTHCNMQGHTKDTCYQLIGYPADYKGKKKANIVTAPSLPQMQHNNF 327
Query: 261 DAG-------TSSSIG------------QGSSTSSNAG------FSQEQLVQLASLLQQA 295
+ T IG G S+ S AG Q Q ++LQ
Sbjct: 328 NNNLNYPMQYTGDGIGHFVSPMQFTGNTNGHSSGSIAGNFGPGSVPQFTPSQYNNILQML 387
Query: 296 NLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSF 355
N + + SS+ + ++ S T S S W++DSGA +H+ N +
Sbjct: 388 NKPMLSESSANVAGIFAGSSHCNSNTHS-------------SAWIVDSGATDHMVSNTTL 434
Query: 356 FSSFYRIP-PVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESL 414
+ + P V LP +V ++G+ T + +VL P F NL+SV+KL + L
Sbjct: 435 LNHGLSVSHPGKVQLPTGDSAVVTHSGSSQLTGGDVVKNVLCVPTFQFNLLSVSKLTKEL 494
Query: 415 SYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATIS 474
+ + F IIQD + K+ + ++++GLY P S + + K C
Sbjct: 495 NCCVIFFPDFFIIQDLFTGKVKEIGEEINGLYITRPHQHHDTSKKTLAAIKGCE------ 548
Query: 475 CNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV---CDLCHFAKHKHLPF 531
+WH RLGH+ L + + S K V CD+C A+ LPF
Sbjct: 549 --------EAEMWHKRLGHIPMSVLRKIKM-----FDSPQKLVLPSCDVCPLARQVRLPF 595
Query: 532 NSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVI 591
S S + F+L+HLD+WGP A+ + RYFLT+VDDHSR+ W+ L+ K++VST +
Sbjct: 596 PISQSRSENCFDLIHLDVWGPYKAATHNKMRYFLTVVDDHSRWTWIFLMHLKSDVSTVLQ 655
Query: 592 NFITMIQTQFHITPKFIRTDNGPEF---MLSTFYASHGIIHQKSCVETPQQNGRVERKHQ 648
NFI MI TQF K R+DNG EF + SHGI+HQ SC TPQQNG VER+H+
Sbjct: 656 NFILMIDTQFGQKIKIFRSDNGTEFFNAQCDGLFKSHGIVHQSSCPHTPQQNGVVERRHK 715
Query: 649 HILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKV 708
HIL RAL FQ LP FW +L AV +INR+P+ +LHN+SP+ +++ + P L+ +V
Sbjct: 716 HILETARALRFQGHLPIRFWGECVLSAVHIINRIPSSVLHNKSPFELMYKRSPDLSYMRV 775
Query: 709 FGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLP 768
GCLC+A+ L + T+ KG+ LYD++ + FVSR + F+E P
Sbjct: 776 IGCLCHATNLVNTSTQ-----------------KGYKLYDLEHQHFFVSRDMVFNEAVFP 818
Query: 769 YPHTSLSTTPNWEYF-----SSSNFSDV-SNQPTPINSPAIIDDILPPSPPINPPPPPPI 822
+ +L+ + F SS+ D + QP I S II PPS + PP
Sbjct: 819 FQSPALADPHDTPVFLASPPCSSHTEDADAVQPAIITSEEIIPVASPPSAVSDDHLHPP- 877
Query: 823 PVVSPASRTSTRQTTTPSYLQDYVCNNIHTSP---YPINNYISHHNLSNNYSSFVMSLHT 879
P R S R P + +D++ + S YPI++ I + LS+ Y ++ S
Sbjct: 878 ----PERRRSYRTGKPPIWQKDFITTSTSRSNHCLYPISDNIDYSCLSSTYQCYIASSSV 933
Query: 880 TTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGS 939
TEP+ Y +A+ W AM+ E+QALE TW++V LP K IGC+W+YK+KY A G
Sbjct: 934 ETEPQFYYQAANDCRWVHAMKEEIQALEDNKTWEVVSLPKGKKAIGCKWVYKIKYKASGE 993
Query: 940 IERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHG 999
IER KARLVAKGYNQ EGLDY +T+SPV K+ T+R V+ L+ W + Q+DV NAFL G
Sbjct: 994 IERFKARLVAKGYNQKEGLDYQETFSPVVKMVTLRTVLTLAVSKGWDIQQMDVYNAFLQG 1053
Query: 1000 DLQEDVYMLIPPGIKSNKPN--QVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSD 1057
DL E+VYM +P G + +K +VC+L KSLYGLKQASR+W KLT+ L + Q+ D
Sbjct: 1054 DLIEEVYMQLPQGFQYDKTGDPKVCRLLKSLYGLKQASRQWNVKLTTALLAAGFQQSHLD 1113
Query: 1058 HSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVA 1117
+SL +K+T+ I+L+YVDD++I G SL K VL A+FKIKDLG L+YFLG+E A
Sbjct: 1114 YSLMLKRTADGIVIVLIYVDDLLITGSSLQLIDDAKQVLKANFKIKDLGTLRYFLGMEFA 1173
Query: 1118 HSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIK-------LHQDSSPS---YADI 1167
+ G+ + QRKY L+L++D G SKP TP + +K LH SS + AD
Sbjct: 1174 RNASGMLMHQRKYALELISDLGLGGSKPSVTPVELHLKLTTREFDLHVGSSGADSLLADP 1233
Query: 1168 PSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFP 1227
Y+RLVGRLLYL TRPDI+F Q LSQF+ P +H AA+RV++Y+K PG GL+
Sbjct: 1234 TEYQRLVGRLLYLTITRPDISFAVQHLSQFMHAPKVSHMEAAIRVVKYVKQAPGLGLYMA 1293
Query: 1228 RNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALA 1287
++ LQ + DADW C++TR+SI+G G++L+SW++KKQ T+SRSS+EAEYR+LA
Sbjct: 1294 VQTADTLQAYCDADWGSCINTRKSITGYMIQFGSALLSWKSKKQPTISRSSAEAEYRSLA 1353
Query: 1288 SATCELQWILYLLQDIHISCPKLPV-LYCDNQSALHIAANPVFHERTKHLEIDCHIVREK 1346
S EL W+ L +++ + LPV LYCD+++A+ IAANPVFHERTKH++IDCH +REK
Sbjct: 1354 STVAELVWLTGLFKELDMPL-SLPVSLYCDSKAAIQIAANPVFHERTKHIDIDCHFIREK 1412
Query: 1347 VQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
VQAG++ + + +Q+Q AD TK L + L+SK+GL NI+ P
Sbjct: 1413 VQAGLVMIHYLPTQEQPADILTKGLSSAQHSYLVSKLGLKNIFIP 1457
>UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 949 bits (2452), Expect = 0.0
Identities = 550/1479 (37%), Positives = 814/1479 (54%), Gaps = 133/1479 (8%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L K K GFING IP P +D N W N ++ W+ S+ + T+ F A +
Sbjct: 64 ALQAKRKTGFINGTIPRPPPNDPNYENWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLL 123
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL++RFS +++RI +R+ +++ +Q ++V++Y+ + LWEE ++P+ C+C
Sbjct: 124 WKDLKQRFSVGNKVRIHQIRAQLSSCRQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTC-G 182
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
CRC A+ R E++I QF+ GL++ +F + ++ +DPLPSL ++YS V++EE
Sbjct: 183 LCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIYSRVIREEQR 242
Query: 183 NASLSSLSVSD------------DSSIQINASDVR-KFQGRGKNPSQPKPTRLCTFSNRT 229
AS+ + D +++AS R + G ++ S K C+ RT
Sbjct: 243 LASVHVREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRT 302
Query: 230 NHTVDFCYLKHGYPNV-NKAQPRVNAVTHEDVDAGTSSSIGQGS-----STSSNAG---- 279
H C+ G+P+ ++ + G++ GQG +TSSN+
Sbjct: 303 GHEKKECWQIVGFPDWWSERNGGRGSNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPE 362
Query: 280 FSQEQLVQLASLLQQANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYW 339
F++E + L+ L+++ + + S+S +S+ +S + I
Sbjct: 363 FTEEHMRVLSQLVKEKS---NSGSTSNNNSDRLSGKTKLGDII----------------- 402
Query: 340 LLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPA 399
LDSGA+ H++ LS ++ +PP V + + G ++ ++ L++VL+ P+
Sbjct: 403 -LDSGASHHMTGTLSSLTNVVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPS 461
Query: 400 FTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVF 459
LISV+KL + FT C +QD S +IG ++ G+Y T
Sbjct: 462 LNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTD--------- 512
Query: 460 SSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCD 519
V ++++ ALWH RLGH S L S+ L + S+ CD
Sbjct: 513 ----------VTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPL-FSKTSSTVTSHSCD 561
Query: 520 LCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVIL 579
+C AK F SI+ F L+H D+WGP + + G YFLTIVDD+SR +W L
Sbjct: 562 VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYL 621
Query: 580 LKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQ 638
L K+EV + NF+ + QF T K +R+DNG EFM LS+++ +GIIHQ SCV TPQ
Sbjct: 622 LLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYFRENGIIHQTSCVGTPQ 681
Query: 639 QNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHH 698
QNGRVERKH+HILNV RALLFQ+ LP FW +IL A +LINR P+ IL ++PY VLH
Sbjct: 682 QNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHG 741
Query: 699 QLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSR 758
P + +VFG CY + + K R+R IF+GY G KG+ +YDI+ E VSR
Sbjct: 742 SKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSR 801
Query: 759 HVTFHETFLPYPHTSLS-------------------------------------TTPNWE 781
V F E PY + S TT
Sbjct: 802 DVIFREEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEVV 861
Query: 782 YFSSSNFSDVSNQ-----PTPINSPAIIDDILPPSPPINP---PPPPPIPVVSPASRTST 833
+S + S++ NQ TP +SP + P+ P P P PIPV P R S
Sbjct: 862 LDTSVSDSEIPNQEFVPDDTPPSSPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSK 921
Query: 834 RQTTTPSYLQDYVCNN-------IHTSP--------------YPINNYISHHNLSNNYSS 872
R T P L DYV N IH P +P+ +Y+S S+++ +
Sbjct: 922 RATHPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRA 981
Query: 873 FVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKV 932
++ ++ EPK + EA + W AM E+ ALE TW +VDLP IG +W++K
Sbjct: 982 YLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKT 1041
Query: 933 KYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDV 992
KY++DG++ER+KARLV +G Q+EG DY +T++PV ++TT+R ++ + + W ++Q+DV
Sbjct: 1042 KYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDV 1101
Query: 993 NNAFLHGDLQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYI 1052
+NAFLHGDL+E+VYM +PPG + + P++VC+L+KSLYGLKQA R W++KL+ L ++
Sbjct: 1102 HNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFV 1161
Query: 1053 QASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFL 1112
Q+ D+SLF ++ +L+YVDD++I G+ K L F +KDLG+LKYFL
Sbjct: 1162 QSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFL 1221
Query: 1113 GIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRR 1172
GIEV+ GI L QRKY LD++ADSG + S+P TP + + L D P +D YRR
Sbjct: 1222 GIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRR 1281
Query: 1173 LVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSI 1232
LVGRLLYL TRP++++ L+QF+ P +AH AALRV+RYLKG PG+G+ + +
Sbjct: 1282 LVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDL 1341
Query: 1233 NLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCE 1292
L+ + D+DW C TRRSIS LG S ISW+TKKQ TVS SS+EAEYRA++ A E
Sbjct: 1342 TLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKE 1401
Query: 1293 LQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGIL 1352
++W+ LL+++ I LYCD+++A+HIAANPVFHERTKH+E DCH VR+ V+ GI+
Sbjct: 1402 IKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGII 1461
Query: 1353 KLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
V + +Q+AD FTKAL F L+SK+G+ N++ P
Sbjct: 1462 TTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTP 1500
>UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana]
Length = 1633
Score = 946 bits (2445), Expect = 0.0
Identities = 549/1459 (37%), Positives = 805/1459 (54%), Gaps = 177/1459 (12%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L +NKLGFI+G I P D + AW RCN V +WL+NSVS I Q+++F TA +
Sbjct: 68 ALNVRNKLGFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGI 127
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W ++ RF + D R+ ++ ++ ++QGS + Y+TE++ LWEE ++ +P C+C
Sbjct: 128 WKNMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAYYTELQTLWEEHKNYVDLPVCTCGR 187
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C C+A+ + + + +FL GLN+ + R +L+L P+ ++ + +++V Q+E
Sbjct: 188 -CECDAAVKWERLQQRSHVTKFLMGLNESYEQTRRHILMLKPIRTIEEAFNIVTQDERQK 246
Query: 184 ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYP 243
A + V + +++ LCT + HTV CY GYP
Sbjct: 247 AIRPTPKVDNQDQLKLP---------------------LCTNCGKVGHTVQKCYKIIGYP 285
Query: 244 NVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQ-LASLLQQANLVVPAS 302
KA A ++ T + SQ ++ Q + L+ Q N V
Sbjct: 286 PGYKA-----ATSYRQPQIQTQPRMQMPQQ-------SQPRMQQPIQHLISQFNAQVRVQ 333
Query: 303 SSSQASSNHISANPLISTTISAPESSSAGIIPKPSY------------------------ 338
+ S S I+ ++S++G IP PS
Sbjct: 334 EPAATSIYTSSPTATITEHGLMAQTSTSGTIPFPSTSLKYENNNLTFQNHTLSSLQNVLS 393
Query: 339 ---WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVL 395
W++DSGA+ H+ +L+ F + V V+LPN T V + + GT+ TS L +VL
Sbjct: 394 SDAWIIDSGASSHVCSDLTMFRELIHVSGVTVTLPNGTRVAITHTGTICITSTLILHNVL 453
Query: 396 YSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSS 455
P F NLISV C ++ T L MIG K + LY
Sbjct: 454 LVPDFKFNLISV-----------------CCLELTRGL-MIGRGKTYNNLY--------- 486
Query: 456 NSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIIS-SNN 514
++ T + S S+P+ H L L Q+L S P++ S S+
Sbjct: 487 -------------ILETQRTSFSPSLPAATSRHPSLPAL--QKLVSS---IPSLKSVSST 528
Query: 515 KDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRF 574
C + AK K L + S + AS+ F+L+HLDIWGP SI SV G RYFLT+VDD +R
Sbjct: 529 ASHCRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRT 588
Query: 575 LWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCV 634
WV ++K+K+EVS F+ +I TQ++ K IR+DN E + F G+IHQ SC
Sbjct: 589 TWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAFTKFVKEQGMIHQFSCA 648
Query: 635 ETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYF 694
TPQQN VERKHQH+LN+ R+LLFQS +P +WS +L A +LINR+P+P+L N++P+
Sbjct: 649 YTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFE 708
Query: 695 VLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREI 754
+L ++P L K CLCYAST R K PRAR +FLGY SG+KG+ + D++S I
Sbjct: 709 LLLKKIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSI 766
Query: 755 FVSRHVTFHETFLPY-------------PHTSLSTTPNWEYFSSSNFSDV----SNQPTP 797
++R+V FHET P+ P++ L + S D N +
Sbjct: 767 SITRNVVFHETKFPFKTSKFLKESVDMFPNSILPLPAPLHFVESMPLDDDLRADDNNAST 826
Query: 798 INSPAIIDDILPPSPPINPPPPPPIPVVS---PASRTSTRQTTTPSYLQDYVCNNIH--- 851
NS + I P +N + + + P +R R P+YL +Y CN++
Sbjct: 827 SNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIARPK-RNAKAPAYLSEYHCNSVPFLS 885
Query: 852 ----------------------TSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEA 889
T+PYP++ IS+ L+ + S++ + + TEPK++ +A
Sbjct: 886 SLSPTTSTSIETPSSSIPPKKITTPYPMSTAISYDKLTPLFHSYICAYNVETEPKAFTQA 945
Query: 890 SKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVA 949
K + W +A EL ALE+ TW + L +GC+W++ +KY+ DGSIER+KARLVA
Sbjct: 946 MKSEKWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVA 1005
Query: 950 KGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLI 1009
+G+ Q EG+DY +T+SPVAK +++L++ L++ W L Q+DV+NAFLHG+L E++YM +
Sbjct: 1006 QGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSL 1065
Query: 1010 PPGIK-----SNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKK 1064
P G S VC+L KSLYGLKQASR+WY++L+SV ++IQ+ +D+++FVK
Sbjct: 1066 PQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKV 1125
Query: 1065 TSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGIS 1124
+ +S ++LVYVDD++IA + + +K +L + FKIKDLG ++FLG+E+A S GIS
Sbjct: 1126 SCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGIS 1185
Query: 1125 LCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTR 1184
+CQRKY +LL D G KP S P D ++ L ++ + SYR LVGRLLYL TR
Sbjct: 1186 VCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITR 1245
Query: 1185 PDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAG 1244
PDITF LSQFLS PT H AA +VLRYLKG PG+ DADW
Sbjct: 1246 PDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQ----------------DADWGT 1289
Query: 1245 CLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIH 1304
C D+RRS++G C +LG SLI+W++KKQ VSRSS+E+EYR+LA ATCE+ W+ LL+D+H
Sbjct: 1290 CKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLH 1349
Query: 1305 ISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVA 1364
++ L+CDN+SALH+A NPVFHERTKH+EIDCH VR++++AG LK L V + +Q+A
Sbjct: 1350 VTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLA 1409
Query: 1365 DFFTKALLPKPFNILLSKM 1383
D TK L P PF+ LL ++
Sbjct: 1410 DILTKPLHPGPFHSLLKRI 1428
>UniRef100_Q9LFY6 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 940 bits (2430), Expect = 0.0
Identities = 554/1450 (38%), Positives = 779/1450 (53%), Gaps = 169/1450 (11%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNKLGF++G + P DD W RCN +V
Sbjct: 90 SLDAKNKLGFVDGSLLRPSVDDSTFRIWSRCNSMV------------------------- 124
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
++L R+ L + L+QG + YFT+ K LWE+LA+ + +
Sbjct: 125 -NNLPRRYQ---------LEQAVMTLQQGKLDLSTYFTKKKTLWEQLANTKS----RSVK 170
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C C+ K +++QFL GL+D F+ +R+Q+ + P P LN++Y+++ Q+ES
Sbjct: 171 KCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPGLNEIYNMLDQDESQR 230
Query: 184 -ASLSSLSVSDDSSIQINASDVRKFQGR----GKNPSQPKPTRLCTFSNRTNHTVDFCYL 238
++ SV S V Q N +PK CT NR HTVD CY
Sbjct: 231 LVGFAAKSVPSPSPAAFQTQGVLNDQNTILLAQGNFKKPK----CTHCNRIGHTVDKCYK 286
Query: 239 KHGYPNVNKAQPRVNAVTHEDVD--AGTSSSIGQGSSTSSNAG---FSQEQLVQLASLLQ 293
HGYP PR T+ A T Q T S G S + + QL S L
Sbjct: 287 VHGYP---PGHPRAKENTYVGSTNLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLS 343
Query: 294 QANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSY--------------- 338
L P+ +S + S+NP+ S + ++ ++ P PS
Sbjct: 344 -TKLQSPSITSCFDKAIASSSNPVPSISQITDKAIASSSNPVPSISQITGTFFSLYDSTY 402
Query: 339 ------------------WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYA 380
W++DSGA+ H++ + + ++ + +V LPN V ++
Sbjct: 403 YEMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGT 462
Query: 381 GTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAK 440
G + T L +VL+ P F NL+SV+ L ++L + FTS C+IQ M+G
Sbjct: 463 GFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGS 522
Query: 441 QLDGLYKYT-------PSSCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGH 493
Q+ LY SS SV SSV ++S +WH RLGH
Sbjct: 523 QVGNLYILNLDKSLVDVSSFPGKSVCSSVKNES------------------EMWHKRLGH 564
Query: 494 LSHQRLHSMS--LLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWG 551
S ++ ++S L+ P + + C +CH +K KHLPF S FEL+H+D WG
Sbjct: 565 PSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHIDTWG 624
Query: 552 PLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTD 611
P S+ +V +RYFLTIVDD SR W+ LLK K++V T +F+ M++TQ+H +R+D
Sbjct: 625 PFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSD 684
Query: 612 NGPEFMLSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYA 671
N E + +A GI C ETP+QN VERKHQH+LNV RAL+FQS +P +W
Sbjct: 685 NAHELKFNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDC 744
Query: 672 ILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARK 731
+L AVFLINR+ +P+++N++PY L P + K FGCLCY ST RTK PRA+
Sbjct: 745 VLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKA 804
Query: 732 SIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDV 791
IFLGY G+KG+ L DI++ + +SRHV F+E P F+SSN +D
Sbjct: 805 CIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFP--------------FASSNITDA 850
Query: 792 SNQPTP-INSPAIIDDILPPSPPINPPPP-----PPIPVVSPASRTSTRQTTTPSYLQDY 845
+ P I PA +D P + P + P+ STRQ PS+LQD+
Sbjct: 851 AKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSMIFVPSEPKSTRQRKLPSHLQDF 910
Query: 846 VCNN-----IHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQ 900
C N TSPYP+ NYIS+ LS + +F+ + T P+ Y+EA W AM
Sbjct: 911 HCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITATKLPQKYSEARLDKVWNDAMG 970
Query: 901 VELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDY 960
E+ A +TGTW + DLP+ +GC+WI +K+ ADGSIERHKARLVAKGY Q EG+D+
Sbjct: 971 KEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDF 1030
Query: 961 FDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNKPNQ 1020
F+T+SPVAK+ T++++++L+ W+LHQLD++NA L+GDL+E++YM +PPG + +
Sbjct: 1031 FNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQGQE 1090
Query: 1021 VCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDII 1080
V K DH+LFVK F ++LVYVDDI+
Sbjct: 1091 VSPNAK---------------------------CHGDHTLFVKAQDGFFLVVLVYVDDIL 1123
Query: 1081 IAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGT 1140
IA + + S L + F+++DLG+ K+FLGIE+A + GISLCQRKY LDLLA S
Sbjct: 1124 IASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDF 1183
Query: 1141 IDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQ 1200
D KP S P + + KL +D+ D YRR++G+L YL TRPDI F +L+Q+ S
Sbjct: 1184 SDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSA 1243
Query: 1201 PTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLG 1260
PT H A ++LRYLKG G+GLF+ +++ +L+GFSD+DW C DTRR ++G F+G
Sbjct: 1244 PTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVG 1303
Query: 1261 NSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSA 1320
NSL+SWR+KKQ VS SS+EAEYRA++ AT EL W+ Y+L I LYCDN++A
Sbjct: 1304 NSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAA 1363
Query: 1321 LHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILL 1380
LHIA N VFHERTKH+E DCH VRE ++AGILK + V + +Q+AD TK L PKPF
Sbjct: 1364 LHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPFRENN 1423
Query: 1381 SKMGLINIYQ 1390
SK+GL+NIY+
Sbjct: 1424 SKLGLLNIYE 1433
>UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 930 bits (2403), Expect = 0.0
Identities = 550/1468 (37%), Positives = 806/1468 (54%), Gaps = 116/1468 (7%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L K K GFING I P D+ + W+ N ++ W+ S+ + T+ F A ++
Sbjct: 59 ALQAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQL 118
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W +L++RFS +++R+ +++ + +Q + V+DY+ + LWEE ++PI C C
Sbjct: 119 WSELKQRFSVGNKVRVHQIKAQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKC-G 177
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
C C A+ R E++I QF+ GL+D +F + ++ +DP PSL ++YS VV+EE
Sbjct: 178 LCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQR 237
Query: 183 NASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTR--LCTFSNRTNHTVDFCYLKH 240
AS+ + + GR + R LC+ R+ H C+
Sbjct: 238 LASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIV 297
Query: 241 GYPNVNKAQPRVNAVTHEDVDAGTSSSIGQG--SSTSSNAGFSQEQLVQLASLLQQANLV 298
G+P+ R N SSS G+G SS S+N+G + Q+ A+ +NL
Sbjct: 298 GFPDW--WTERTNG------GGRGSSSRGRGGRSSGSNNSGRGRGQVT--AAHATTSNL- 346
Query: 299 VPASSSSQASSNHISA-NPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFS 357
SS + + + + +I + +G + K +LD+GA+ H++ LS +
Sbjct: 347 ---SSFPEFTPDQLRVITQMIQNKNNGTSDKLSGKM-KLGDVILDTGASHHMTGQLSLLT 402
Query: 358 SFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYS 417
+ IP V + GT + LS+VLY PA +LISV+KL + +
Sbjct: 403 NIVTIPSCSVGFADDRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCL 462
Query: 418 LHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNS 477
FT C++QD S +IG ++ DG+Y T + AT + +
Sbjct: 463 ALFTDTICVLQDRFSRTLIGTGEERDGVYYLTDA-------------------ATTTVHK 503
Query: 478 SSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISH 537
+ALWH RLGH S L S+ L + S +++ CD+C AK F S +
Sbjct: 504 VDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRS-CDVCFRAKQTREVFPDSSNK 562
Query: 538 ASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMI 597
++ F L+H D+WGP + S G YFLTIVDD SR +W LL +K+EV + + NF+
Sbjct: 563 STDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYT 622
Query: 598 QTQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRA 656
+ QF + K IR+DNG EFM LS+++ GI+HQ SCV TPQQNGRVERKH+HILNV RA
Sbjct: 623 EKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRA 682
Query: 657 LLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYAS 716
LLFQ+ LP FW A++ A +LINR P+ I + SPY +LH P + +VFG CYA
Sbjct: 683 LLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAH 742
Query: 717 TLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYP------ 770
+ + K R+R IF+GY G KG+ +YD+ + E VSR V F E PY
Sbjct: 743 RVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDT 802
Query: 771 -HTSLSTTP-----NWEYFSS-----SNFSDVSNQP--------------TPINSPAIID 805
+T T P +W F++ S+ + +S+ P TP + P +D
Sbjct: 803 IYTPPVTCPITYDEDWLPFTTLEDRGSDENSLSDPPVCVTDVSESDTEHDTPQSLPTPVD 862
Query: 806 DILPPSPPINPPPPP--------PIPVVSPASRTST------------RQTTTPSYLQDY 845
D L PS + P P P VSP + +T RQ + L+DY
Sbjct: 863 DPLSPSTSVTPTQTPTNSSSSTSPSTNVSPPQQDTTPIIENTPPRQGKRQVQQLARLKDY 922
Query: 846 VCNNIHTSP----------------------YPINNYISHHNLSNNYSSFVMSLHTTTEP 883
+ N +P YP+ +YI S + F+ ++ EP
Sbjct: 923 ILYNASCTPNTPHVLSPSTSQSSSSIQGNSQYPLTDYIFDECFSAGHKVFLAAITANDEP 982
Query: 884 KSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERH 943
K + EA K W AM E+ ALE TW +VDLP+ IG +W+YK K++ADG++ER+
Sbjct: 983 KHFKEAVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERY 1042
Query: 944 KARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQE 1003
KARLV +G NQIEG DY +T++PV K+TT+R ++ L + + W ++Q+DV+NAFLHGDL+E
Sbjct: 1043 KARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEE 1102
Query: 1004 DVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVK 1063
+VYM +PPG + + P++VC+L+KSLYGLKQA R W++KL+ L +IQ D+S F
Sbjct: 1103 EVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSY 1162
Query: 1064 KTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGI 1123
+LVYVDD+II G+ K L F +KDLG+LKYFLGIEV+ GI
Sbjct: 1163 SCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDGI 1222
Query: 1124 SLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTT 1183
L QRKY LD+++DSGT+ ++P TP + + L D P D +RRLVGRLLYL T
Sbjct: 1223 FLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHT 1282
Query: 1184 RPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWA 1243
RP++++ LSQF+ P +AH AA+R++RYLKG PG+G+ N + L+ + D+D+
Sbjct: 1283 RPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQ 1342
Query: 1244 GCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDI 1303
C TRRS+S LG S ISW+TKKQ TVS SS+EAEYRA++ A E++W+ LL+++
Sbjct: 1343 SCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKEL 1402
Query: 1304 HISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQV 1363
I+ L+CD+++A+ IAANPVFHERTKH+E DCH VR+ V+ GI+ V + +Q+
Sbjct: 1403 GITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQL 1462
Query: 1364 ADFFTKALLPKPFNILLSKMGLINIYQP 1391
AD FTKAL F L+SK+G+ N++ P
Sbjct: 1463 ADIFTKALGRNQFIYLMSKLGIQNLHTP 1490
>UniRef100_O23302 Retrovirus-related like polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 918 bits (2373), Expect = 0.0
Identities = 551/1537 (35%), Positives = 808/1537 (51%), Gaps = 269/1537 (17%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L +NKLGFING I P D + AW RCN +V +WL+NSV I Q++++ T +
Sbjct: 67 ALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGI 126
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W++L RF + D RI ++ ++ ++QGS + Y+T + LWEE ++ +P C+C
Sbjct: 127 WNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRNYVELPVCTCGR 186
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C C+A+ + + ++ +FL LN+ F R +L+L P+P++ + +++V Q+E
Sbjct: 187 -CECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAFNMVTQDERQR 245
Query: 184 ASLSSLSVSDDSSIQINASDVRKFQGR---GKNPSQPKPTRLCTFSNRTNHTVDFCYLKH 240
++ L+ D + Q N S + + + N +P +CT + HT+ CY H
Sbjct: 246 -NVKPLTRVDSVAFQ-NTSMINEDENAYVAAYNTVRPNQKPICTHCGKVGHTIQKCYKVH 303
Query: 241 GYPNVNK-------------------------------AQPRVNAVTHEDVDAGTSSSIG 269
GYP K AQP N++ +V A + G
Sbjct: 304 GYPPGMKTGNTGYTYKPNPQLHVQPRMPMMPQPRMQFPAQPYTNSMQKANVVAQVYAETG 363
Query: 270 -------------------------QGSSTSSNAGFSQEQLVQLASLLQ-QANLVVPASS 303
G + S F+ +Q+ Q+ S Q Q + PA+S
Sbjct: 364 AYPSEGYSQAPMMNPYGSYPMPHITHGGNNLSLQDFTPQQIEQMISQFQAQVQVPEPAAS 423
Query: 304 SSQASSNHISANPLISTT---ISAPESSSAGIIPKPSY---------------------- 338
SS S PL + + A S+S IIP PS
Sbjct: 424 SSNPS-------PLATVSEHGFMALTSTSGTIIPFPSTSLKYENNDLKFQNHTLSALQKF 476
Query: 339 -----WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSH 393
W++DSGA+ H+ +L+ F L +GTV T L +
Sbjct: 477 LPSDAWIIDSGASSHVCSDLAMFRE-----------------LKSVSGTVHITQKLILHN 519
Query: 394 VLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSC 453
VL+ P F NL+SV+ L +++S S HF C+IQ+ MIG + LY +
Sbjct: 520 VLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRLYHNLYILETENT 579
Query: 454 SSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSN 513
S S+ + +C ++ + LWH RLGH S L +
Sbjct: 580 SP----STSTPAACLFTGSV-------LNDGHLWHQRLGHPSSVVLQKL----------- 617
Query: 514 NKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSR 573
K L + S + AS F+L+HLDIWGP SI S+ G RYFLT+VDD +R
Sbjct: 618 -------------KRLAYISHNNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTR 664
Query: 574 FLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSC 633
WV +L++K +VS+ FI ++ TQF+ K IR+DN PE + HG++H SC
Sbjct: 665 TTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSC 724
Query: 634 VETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPY 693
TPQQN VERKHQHILNV RALLFQS +P +WS + AVFLINR+P+P+L+N+SPY
Sbjct: 725 AYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPY 784
Query: 694 FVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSRE 753
++ ++ P +L K FGCLC+ ST RTK PRAR +FLGY SG+KG+ + D++S
Sbjct: 785 ELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHS 844
Query: 754 IFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPIN----SPAIIDDILP 809
+ VSR+V F E P+ TS + F +S + P P++ P I +D L
Sbjct: 845 VTVSRNVVFKEHVFPF-KTSELLNKAVDMFPNS----ILPLPAPLHFVETMPLIDEDSLI 899
Query: 810 PSPPIN-------PPPPPPIP-VVSPASRTST--------------RQTTTPSYLQDYVC 847
P+ + +P ++ P+S T T R T PSYL +Y C
Sbjct: 900 PTTTDSRTADNHASSSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHC 959
Query: 848 NNI----------------------------HTSPYPINNYISHHNLSNNYSSFVMSLHT 879
+ + T+PYPI+ +S+ + S++ + +T
Sbjct: 960 SLVPSISTLPPTDSSIPIHPLPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAYNT 1019
Query: 880 TTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGS 939
TEPK++++A K + W + ELQA+E TW + LP + +GC+W++ +KY+ DG+
Sbjct: 1020 ETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGT 1079
Query: 940 IERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHG 999
+ER+KARLVA+G+ Q EG+D+ DT+SPVAKLT+ ++++ L++I W L Q+DV++AFLHG
Sbjct: 1080 VERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFLHG 1139
Query: 1000 DLQEDVYMLIPPGIKSN-----KPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQA 1054
DL E+++M +P G PN VC+L KS+YGLKQASR+WY++
Sbjct: 1140 DLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKR------------- 1186
Query: 1055 SSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGI 1114
F LVY+DDI+IA ++ E +K++L + FKIKDLG ++FLG+
Sbjct: 1187 --------------FVAALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFLGL 1232
Query: 1115 EVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLV 1174
+ KP S P D ++ L +D + +YR+L+
Sbjct: 1233 --------------------------LGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRKLI 1266
Query: 1175 GRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINL 1234
GRLLYL TRPDIT+ QLSQF+S P+ H AA +VLRY+K PG+GL + + I L
Sbjct: 1267 GRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICL 1326
Query: 1235 QGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQ 1294
GFSDADWA C DTRRSISG C +LG SLISW++KKQ SRSS+E+EYR++A ATCE+
Sbjct: 1327 NGFSDADWAACKDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEII 1386
Query: 1295 WILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKL 1354
W+ LL+D+HI L+CDN+SALH + NPVFHERTKH+EIDCH VR++++AG LK
Sbjct: 1387 WLQQLLKDLHIPLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKA 1446
Query: 1355 LPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
L V +++Q AD TKAL P PF+ LL +M L +++ P
Sbjct: 1447 LHVPTENQHADILTKALHPGPFHHLLRQMSLSSLFLP 1483
>UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 872 bits (2252), Expect = 0.0
Identities = 519/1471 (35%), Positives = 795/1471 (53%), Gaps = 139/1471 (9%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L ++ K GF++G IP P + W N L+ SW+ ++ + I D A ++
Sbjct: 53 ALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDL 112
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W +++RFS + + +++ + KQ +V Y+ ++ +W+ + S+RP+ C C
Sbjct: 113 WEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNINSYRPLRICKCGR 172
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEES- 181
C C + +R +D + Q+L GLN+ +F +R+ + PLP L +VY++V QEE
Sbjct: 173 -CICNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLEEVYNIVRQEEDM 231
Query: 182 -NNASLSSLSVSDDSSIQINASDVRK------FQGRGKNPSQPKPTRLCTFSNRTNHTVD 234
NN S S++ + A V+ + N + + +LCT NR H+ +
Sbjct: 232 VNNRS------SNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKKLCTHCNRGGHSPE 285
Query: 235 FCYLKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGS-STSSNAGFSQEQLVQLASL-- 291
C++ GYP +PR + ++ S+S G+G N G + V +
Sbjct: 286 NCFVLIGYPEWWGDRPRGKS------NSNGSTSRGRGRFGPGFNGGQPRPTYVNVVMTGP 339
Query: 292 ---LQQANLVVPASSSSQASSNHISA--------NPLISTTISAPESSSAGIIPKPSYWL 340
+ N V+ S S N S S + +G + W+
Sbjct: 340 FPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNAGRSDNKSNAHETQSGTCSLFTSWI 399
Query: 341 LDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAF 400
LD+GA+ H++ NL S + PV + L + + GTV S+ L V Y
Sbjct: 400 LDTGASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKEL 459
Query: 401 THNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFS 460
+LISV ++ + HC+ + T + IG K+ +G S C +
Sbjct: 460 ESDLISVGQMMDE---------NHCVDRTTRMVTRIG--KRENG------SFCFRGMENA 502
Query: 461 SVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNK---DV 517
+ H S LWH RLGH S + ++LL ++SS + +V
Sbjct: 503 AAVHTSVKAPFD-------------LWHRRLGHASDK---IVNLLPRELLSSGKEILENV 546
Query: 518 CDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWV 577
CD C AK F S + + +F+L+H D+WGP S G RYFLTIVDD+SR +WV
Sbjct: 547 CDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWV 606
Query: 578 ILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASH-GIIHQKSCVET 636
L+ K+E H+ +FI +++ QF K +R+DNG EF+ Y H GI H+ SCV T
Sbjct: 607 YLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCVGT 666
Query: 637 PQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVL 696
P QNGRVERKH+HILN+ RAL FQS LP FW IL A +LINR P+ +L +SPY +L
Sbjct: 667 PHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEML 726
Query: 697 HHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFV 756
+ P + +VFG LCYA K R+R+ +F+GY G KG+ L+D++ ++ FV
Sbjct: 727 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 786
Query: 757 SRHVTFHETFLPY---------------------------PHT-------------SLST 776
SR V F ET PY P T +++T
Sbjct: 787 SRDVIFQETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEATVGPNVAT 846
Query: 777 TP-----NWEYFSSSNFSDVSN-QPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPASR 830
P N E S S F +S+ P +S D+ P++ P PI + R
Sbjct: 847 GPIIPEINQESSSPSEFVSLSSLDPFLASSTVQTADL-----PLSSTTPAPIQL-----R 896
Query: 831 TSTRQTTTPSYLQDYVCNNI----------HTSPYPINNYISHHNLSNNYSSFVMSLHTT 880
S+RQT P L+++V N + +S YPI Y+ H ++++ +F+ ++
Sbjct: 897 RSSRQTQKPMKLKNFVTNTVSVESISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAG 956
Query: 881 TEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSI 940
EP +Y EA W++AM E+++L T+ +V+LP + +G +W+YK+KY +DG+I
Sbjct: 957 MEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAI 1016
Query: 941 ERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGD 1000
ER+KARLV G Q EG+DY +T++PVAK++T+RL + +++ +WH+HQ+DV+NAFLHGD
Sbjct: 1017 ERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGD 1076
Query: 1001 LQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSL 1060
L+E+VYM +P G + + P++VC+L KSLYGLKQA R W+ KL+S L + + Q+ SD+SL
Sbjct: 1077 LKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSL 1136
Query: 1061 FVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSK 1120
F F +LVYVDD+II+G KS L++ F +KDLG LKYFLGIEV+ +
Sbjct: 1137 FSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNA 1196
Query: 1121 LGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYL 1180
G L QRKY LD++++ G + ++P + P + + KL +SP +D YRRLVGRL+YL
Sbjct: 1197 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 1256
Query: 1181 NTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDA 1240
TRP++++ L+QF+ P Q H AA+RV+RYLK PG+G+ S++ + G+ D+
Sbjct: 1257 VVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 1316
Query: 1241 DWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLL 1300
D+A C TRRS++G LG++ ISW+TKKQ TVSRSS+EAEYRA+A T EL W+ +L
Sbjct: 1317 DYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVL 1376
Query: 1301 QDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQ 1360
D+ +S + ++ D++SA+ ++ NPV HERTKH+E+DCH +R+ + GI+ V S
Sbjct: 1377 YDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSH 1436
Query: 1361 DQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
Q+AD TKAL K L K+G+++++ P
Sbjct: 1437 KQLADILTKALGEKEVRYFLRKLGILDVHAP 1467
>UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 815 bits (2106), Expect = 0.0
Identities = 514/1412 (36%), Positives = 757/1412 (53%), Gaps = 102/1412 (7%)
Query: 8 KNKLGFINGVIPIP----DADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
K G+++G +P + D ++ WE N + +W+ N V SI + Y+TA EV
Sbjct: 35 KKMWGYVSGTYVVPKNTEEGDTVSIDTWEANNAKIITWINNYVEHSIGTQLAKYETAKEV 94
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W LQ F++ + + L + I L Q + S+ ++++ M LW++LA + +C
Sbjct: 95 WDHLQRLFTQSNFAKQYQLENDIRALHQKNMSIQEFYSAMTDLWDQLALTESVELKAC-- 152
Query: 124 PCRCEASKVAKIHRNEDQ-IMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
A I R E Q ++QFLT L F +R +L PLPS++ V S ++ EE
Sbjct: 153 --------GAYIERREQQRLVQFLTALRSDFEGLRGSILHRSPLPSVDSVVSELLAEEIR 204
Query: 183 NASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGY 242
S S + S+ + A + F P C+F + H C
Sbjct: 205 LQSYSEKGILSASNPSVLAVPSKPFSNHQNKPYTRVGFDECSFCKQKGHWKAQC------ 258
Query: 243 PNVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQANLVVPAS 302
P++ + A S S Q ++ S G+ A++ ++ P +
Sbjct: 259 -------PKLR----QQNQAWKSGSQSQSNAHRSPQGYKPPHH-NTAAVASPGSITDPNT 306
Query: 303 SSSQASSNHISANP--LISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSFY 360
+ Q +S P + +++I SS+GI S W+LDSGA+ H+S + S F+S
Sbjct: 307 LAEQFQK-FLSLQPQAMSASSIGQLPHSSSGI--SHSEWVLDSGASHHMSPDSSSFTSVS 363
Query: 361 RIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHF 420
+ + V + T + + G+V T + L +V P NL S+ ++C+S Y + F
Sbjct: 364 PLSSIPVMTADGTPMPLAGVGSV-VTLHLSLPNVYLIPKLKLNLASIGQICDSGDYLVMF 422
Query: 421 TSAHCIIQDTMSLKMIGLAKQLDGLYKY----TPSSCSSNSVFSSVSHKSCNVVATISCN 476
+ + C +QD S K+IG ++ +GLY P ++ +V S S
Sbjct: 423 SGSFCCVQDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLSL--------- 473
Query: 477 SSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCDL-----CHFAKHKHLPF 531
SSSS LWH RLGH+S RL ++ + + N CD+ C AK LPF
Sbjct: 474 SSSSF---YLWHSRLGHVSSSRLRFLA----STGALGNLKTCDISDCSGCKLAKFSALPF 526
Query: 532 NSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVI 591
N S S +S+ F+L+H D+WGP +++ G RY+++ +DDH+R+ WV L+K ++E
Sbjct: 527 NRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEIYA 586
Query: 592 NFITMIQTQFHITPKFIRTDNGPEFMLSTF---YASHGIIHQKSCVETPQQNGRVERKHQ 648
F +I+TQ K R D G E+ + F A G IHQ SC +TP+QNG ERKH+
Sbjct: 587 AFRALIKTQHSAVIKCFRCDLGGEYTSNKFCQMLALDGTIHQTSCTDTPEQNGVAERKHR 646
Query: 649 HILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKV 708
HI+ R+LL + + FW A+L AV LIN +P+ SP+ L+ +P + F+V
Sbjct: 647 HIVETARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLSPFEKLYGHVPDYSSFRV 706
Query: 709 FGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTF--HETF 766
FGC + R KL R+ +FLGY G KG+ +D +++++VS HV F H F
Sbjct: 707 FGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQKLYVSHHVVFLEHIPF 766
Query: 767 LPYPHTSLSTTPN----WEYFSSSNFSDVSNQPTPI--NSPAIIDDILPPSPPIN---PP 817
P T+ S T + + FS + +D S I ++ A +L +P +
Sbjct: 767 FSIPSTTHSLTKSDLIHIDPFSEDSGNDTSPYVRSICTHNSAGTGTLLSGTPEASFSSTA 826
Query: 818 PPPPIPVVSPASRTSTR---QTTTPSYLQDYVCNNIHTSPYPINNYISHHNLSNNYSSFV 874
P +V P R S R T P + Y C S++++SF+
Sbjct: 827 PQASSEIVDPPPRQSIRIRKSTKLPDFA--YSC------------------YSSSFTSFL 866
Query: 875 MSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKY 934
+H EP SY EA +QAM EL AL KT TW LV LP +GCRW+YK+K
Sbjct: 867 AYIHCLFEPSSYKEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKT 926
Query: 935 HADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNN 994
++DGSIER+KARLVAKGY+Q G+DY +T++P+AK+TTIR +IA++SI WH+ QLDV N
Sbjct: 927 NSDGSIERYKARLVAKGYSQQYGMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKN 986
Query: 995 AFLHGDLQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQA 1054
AFL+GDLQE+VYM PPGI S+ VCKL+K+LYGLKQA R W+EK + V+S ++ +
Sbjct: 987 AFLNGDLQEEVYMAPPPGI-SHDSGYVCKLKKALYGLKQAPRAWFEKFSIVISSLGFVSS 1045
Query: 1055 SSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGI 1114
S D +LF+K T + IL +YVDD+II GD + + +K+ L F++KDLG L+YFLGI
Sbjct: 1046 SHDSALFIKCTDAGRIILSLYVDDMIITGDDIDGISVLKTELARRFEMKDLGYLRYFLGI 1105
Query: 1115 EVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLV 1174
EVA+S G L Q KY ++L + D+K V TP + + + D YR +V
Sbjct: 1106 EVAYSPRGYLLSQSKYVANILERARLTDNKTVDTPIEVNARYSSSDGLPLIDPTLYRTIV 1165
Query: 1175 GRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINL 1234
G L+YL T PDI + +SQF++ PT H A LR+LRYL+G + L SS+ L
Sbjct: 1166 GSLVYLTITHPDIAYAVHVVSQFVASPTTIHWAAVLRILRYLRGTVFQSLLLSSTSSLEL 1225
Query: 1235 QGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQ 1294
+ +SDAD R+S++G C FLG+SLISW++KKQ VS+SS+EAEY A+AS T E+
Sbjct: 1226 RAYSDADHGSDPTDRKSVTGFCIFLGDSLISWKSKKQSIVSQSSTEAEYCAMASTTKEIV 1285
Query: 1295 WILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKL 1354
W +LL D+ IS L +YCDNQS++ IA N VFHERTKH+EIDCH+ R ++ G + L
Sbjct: 1286 WSRWLLADMGISFSHLTPMYCDNQSSIQIAHNSVFHERTKHIEIDCHLTRHHLKHGTIAL 1345
Query: 1355 LPVSSQDQVADFFTKALLPKPFNILLSKMGLI 1386
V S Q+ADFFTKA F L+ K+ ++
Sbjct: 1346 PFVPSSLQIADFFTKAHSISRFCFLVGKLSML 1377
>UniRef100_Q9FX79 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 795 bits (2053), Expect = 0.0
Identities = 399/869 (45%), Positives = 567/869 (64%), Gaps = 33/869 (3%)
Query: 509 IISSNNKDV--CDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLT 566
I + NK + CD+C AK K L + S + F+LLH+D+WGP S + G+ YFLT
Sbjct: 555 IFKTKNKGLLHCDICQRAKQKKLTYPSRHNICLAPFDLLHIDVWGPFSEPTQEGYHYFLT 614
Query: 567 IVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHG 626
IVDDH+R WV L+K K++V T +FITM++TQ+ K +R+DN PE Y G
Sbjct: 615 IVDDHTRVTWVYLMKYKSDVLTIFPDFITMVETQYDTKVKAVRSDNAPELKFEELYRRKG 674
Query: 627 IIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPI 686
I+ SC ETP+QN VERKHQHILNV RALLFQS++P S+W IL AVF+INR P+P+
Sbjct: 675 IVAYHSCPETPEQNSVVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPV 734
Query: 687 LHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTL 746
+ N++ + +L ++P K FGCLCYAST R K + RAR FLGY SG+KG+ L
Sbjct: 735 ISNKTLFEMLTKKVPDYTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKL 794
Query: 747 YDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDD 806
D++S IF+SR+V F+E P+ T P N+ + + P I D
Sbjct: 795 LDLESHTIFISRNVVFYEDLFPF-----KTKP------------AENEESSVFFPHIYVD 837
Query: 807 ILPPSPPINPPPPPPIPVVS----PASRTSTRQTTTPSYLQDYVCNNIHTSP-YPINNYI 861
+P P P+ S PA + ++R + P+YL+DY CN++ +S +PI+ +
Sbjct: 838 ----RNDSHPSQPLPVQETSASNVPAEKQNSRVSRPPAYLKDYHCNSVTSSTDHPISEVL 893
Query: 862 SHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNI 921
S+ +LS+ Y F+ +++ EP +YA+A + W AM +E+ ALE GTW + LP
Sbjct: 894 SYSSLSDPYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPVGK 953
Query: 922 KPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSS 981
K +GC+W+YK+K +ADGS+ER+KARLVAKGY Q EGLDY DT+SPVAKLTT++L+IA+++
Sbjct: 954 KAVGCKWVYKIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAA 1013
Query: 982 IHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASR 1036
W L QLD++NAFL+G L E++YM +PPG + PN VC+L+KSLYGLKQASR
Sbjct: 1014 AKGWSLSQLDISNAFLNGSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLKKSLYGLKQASR 1073
Query: 1037 KWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVL 1096
+WY K + L + Q+S DH+LF +K+ +S+ +LVYVDDIIIA E ++ L
Sbjct: 1074 QWYLKFSESLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRDAL 1133
Query: 1097 DASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKL 1156
S K++DLG L+YFLG+E+A + GIS+CQRKY L+LLA++G + K S P + + KL
Sbjct: 1134 QRSSKLRDLGTLRYFLGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKL 1193
Query: 1157 HQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYL 1216
Q+ D YR+LVG+L+YL TRPDIT+ +L QF S P H A +++ YL
Sbjct: 1194 SQEDGELIDDAEHYRKLVGKLMYLTFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYL 1253
Query: 1217 KGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSR 1276
KG G+GLF+ N + L GF+D+D++ C D+R+ +G C FLG SL++W++KKQ +S
Sbjct: 1254 KGTVGQGLFYSANVDLKLSGFADSDFSSCSDSRKLTTGYCMFLGTSLVAWKSKKQEVISM 1313
Query: 1277 SSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHL 1336
SS+EAEY+A++ A E+ W+ +LL+D+ I + VLYCDN +A+HIA NPVFHERTKH+
Sbjct: 1314 SSAEAEYKAMSMAVREMMWLRFLLEDLWIDVSEASVLYCDNTAAIHIANNPVFHERTKHI 1373
Query: 1337 EIDCHIVREKVQAGILKLLPVSSQDQVAD 1365
E D H +REK+ G+++ L V +++Q+AD
Sbjct: 1374 ERDYHHIREKIILGLIRTLHVRTENQLAD 1402
Score = 198 bits (503), Expect = 1e-48
Identities = 138/472 (29%), Positives = 223/472 (47%), Gaps = 28/472 (5%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L KNK+ FI+G P P+ + W RCN +V+SW++NSV+ I +I+ +D A ++
Sbjct: 86 ALDAKNKIAFIDGSCPRPEEGNHLLRIWSRCNSMVKSWILNSVNREIYGSILSFDDAAQI 145
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W+DL RF + R L I +L+QGS ++ Y+T +K L + L C C
Sbjct: 146 WNDLHNRFHMTNLPRTFQLVQQIQDLRQGSMNLSTYYTTLKTLRDNLDGAEASVPCHCCK 205
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEE--- 180
CE+ AK + N +I++FL GLN+++SI+R Q+++ PLP L +VY+++ Q++
Sbjct: 206 KSTCESQIFAKSNVNRGRIIKFLAGLNEKYSIIRGQIIMKKPLPDLAEVYNILDQDDSQR 265
Query: 181 --SNNASLSSLSVS-DDSSIQINASDVRKFQGRGKNPSQPKPTR-LCTFSNRTNHTVDFC 236
SNN + ++ V+ DD AS Q Q K + +C+ T HT + C
Sbjct: 266 QFSNNVASAAFQVTKDDVQPGALASSSNMPQPGMLGAVQKKDKKSICSHYGYTGHTSERC 325
Query: 237 YLKHGYP-----NVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASL 291
Y HGYP + + A S+ Q + S N E L+ S
Sbjct: 326 YKLHGYPVGWKKGKSFYEKIAQASQSSQAPKPNSAVTAQVTGNSQNTPAGLESLIGNMSK 385
Query: 292 LQQANLVVPASSSSQASSNHISANPLIST--------TISAPESSSAGIIP------KPS 337
Q NL+ SS Q +S ++ P+ ++ T S+ S GI+
Sbjct: 386 DQIQNLIALFSSQLQPASPVLNTAPMSTSHNNDPSGITFSSSTFSFIGILTVSETEMTHG 445
Query: 338 YWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYS 397
W++DSGA H+ F + +V+LP T + V G ++ ++ L +VLY
Sbjct: 446 TWIVDSGATHHVCHVKDMFLNLDTSVQHHVNLPTGTTIRVGGVGNIAVNADLILKNVLYI 505
Query: 398 PAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIG--LAKQLDGLYK 447
P F NL+SV+ L + + F C++ D IG L + G++K
Sbjct: 506 PEFRLNLLSVSALTTDIGARVVFDPTCCVVHDLTKGSTIGSDLLTDVLGIFK 557
>UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]
Length = 1358
Score = 790 bits (2040), Expect = 0.0
Identities = 493/1396 (35%), Positives = 742/1396 (52%), Gaps = 120/1396 (8%)
Query: 22 DADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEVWHDLQERFSKVDRIRIAN 81
+ D +A WE+ + + S L S+ + + T + VW + ++ D R +
Sbjct: 56 EEDAKAKAQWEKVDAQLCSLLWRSIDFKLMPLFRPFQTCYTVWEKARALYTN-DISRFYD 114
Query: 82 LRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIHPCRCEASKVAKIHRNEDQ 141
+ S + NLK+ + Y +++A+ EE + P+ + + HR
Sbjct: 115 VISRLTNLKKQESDMSTYLGQVQAVMEEFDTLMPVTT----------NVEKQQEHRQTLF 164
Query: 142 IMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNNASLSSLSVSDDSSIQINA 201
++ L GL VR Q+L +P++++++S +++ + + S + DSSI +
Sbjct: 165 LVLTLAGLPPDHDSVRDQILASPTVPTIDELFSRLLRLAAPPSHKVVSSPTVDSSILASQ 224
Query: 202 SDVRK----FQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYPNVNK--AQPRVNAV 255
+ ++ + R KP C+ ++ HT D CY+ HG P N
Sbjct: 225 TFEKRTYQSMENRRGGGRFGKPRSKCSHCHKPGHTRDICYILHGPPPSYDPIVLKEYNEF 284
Query: 256 THEDVDAGTSSSIGQGSST---SSNAGFSQ---EQLVQLASLLQQANLVVPASSSSQASS 309
TS + G+ S+NA +Q ++ +Q + Q + VV + + +
Sbjct: 285 LRNRASKQTSPPVAYGAQPNQPSNNAHIAQTEYDEFLQYRANKQTSPQVVSVAQPDVSVA 344
Query: 310 NHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSF-YRIPPVYVS 368
+ A S+T+ W++DSGA++HIS N S S Y ++
Sbjct: 345 GNSFACVSQSSTLGT--------------WVMDSGASDHISGNKSLLSDIVYSQSLPAIT 390
Query: 369 LPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQ 428
L N + G S+ L VLY P NL SV++L ++L S+ F ++Q
Sbjct: 391 LANGIQTKPKGVGKAKPLSSVTLDSVLYVPGSPFNLASVSRLTKALHCSITFFDDFFLMQ 450
Query: 429 DTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWH 488
D + +MIG + GLY T SSNS+ +C++ S L H
Sbjct: 451 DRSTGQMIGTGHESQGLYYLT----SSNSL------AACSIT-----------DSPDLIH 489
Query: 489 FRLGHLSHQRLHSMSLLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHASTN-FELLHL 547
RLGH S +L M P++ S + D C+ C KH F+ S S + F L+H
Sbjct: 490 KRLGHSSLSKLQKM---VPSLSSLSTLD-CESCQLGKHTRATFSRSTEGRSESIFSLVHS 545
Query: 548 DIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKF 607
DIWGP ++S G RYF++ +DD+S+ WV L+K ++E+ + +F IQ QF ++ +
Sbjct: 546 DIWGPSRVSSTLGFRYFVSFIDDYSKCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRT 605
Query: 608 IRTDNGPEFMLSTF--YASH-GIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLP 664
R+DN E++ S F + +H GIIHQ +C TPQQNG ERK++H++ R LL +S +P
Sbjct: 606 FRSDNALEYLSSQFREFMTHQGIIHQTTCPYTPQQNGVAERKNRHLIETARTLLLESNVP 665
Query: 665 PSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLF----KVFGCLCYASTLQS 720
FW A+L + +LINR+P+ + NQ P+ +L P +L+ +VFG C+ L
Sbjct: 666 LRFWGDAVLTSCYLINRMPSSSIQNQVPHSIL---FPQSHLYPIPPRVFGSTCFVHNLAP 722
Query: 721 HRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNW 780
+ KL PRA K +FLGY KG+ Y +S VTF E+
Sbjct: 723 GKDKLAPRALKCVFLGYSRVQKGYRCYSHDLHRYLMSADVTFFES--------------Q 768
Query: 781 EYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPS 840
Y++SSN DVS +LP P P+P ++ TST P
Sbjct: 769 PYYTSSNHPDVSM-------------VLPI------PQVLPVPTFVESTVTSTSPVVVPP 809
Query: 841 YLQDYVCNNIHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSY--AEASKHDCWKQA 898
L H P P + + + L ++P + EA H W+QA
Sbjct: 810 LL------TYHRRPRP--TLVPDDSCHAPDPAPTADLPPPSQPLALQKGEALSHSGWRQA 861
Query: 899 MQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGL 958
M E+ AL K+GTW+LV LP+ +GCRW+Y VK DG ++R KARLVAKGY QI GL
Sbjct: 862 MVDEMSALHKSGTWELVSLPAGKSTVGCRWVYAVKIGPDGQVDRLKARLVAKGYTQIFGL 921
Query: 959 DYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGI--KSN 1016
DY DT++PVAK+ ++RL ++++++ +W LHQLD+ NAFLHGDL+E+VYM PPG +
Sbjct: 922 DYSDTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQPPGFVAQGE 981
Query: 1017 KPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTI-LLVY 1075
+ VC+L++SLYGLKQ+ R W+ K ++V+ ++ +DHS+F + ++ S I L+VY
Sbjct: 982 SSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSRCIYLVVY 1041
Query: 1076 VDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLL 1135
VDDI+I G+ T +K L F+ KDLG+LKYFLGIEVA S+ GI + QRKY LD+L
Sbjct: 1042 VDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIEVAQSRSGIVISQRKYALDIL 1101
Query: 1136 ADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLS 1195
++G + +PV TP D ++KL ++ YRRLVG+L YL TRPDI+F +S
Sbjct: 1102 EETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGKLNYLTVTRPDISFPVSVVS 1161
Query: 1196 QFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQ 1255
QF++ P +H A +R+LRY+K PG+GL F ++ G++DADWAG RRS SG
Sbjct: 1162 QFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGYTDADWAGSPSDRRSTSGY 1221
Query: 1256 CFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYC 1315
C +G +L+SW++KKQ V+RSS+E+EYRA+A+ATCEL WI LL ++ L C
Sbjct: 1222 CVLVGGNLVSWKSKKQNVVARSSAESEYRAMATATCELVWIKQLLGELKFGKVDKMELVC 1281
Query: 1316 DNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKP 1375
DNQ+ALHIA+NPVFHERTKH+EIDCH VREK+ +G + V S DQ+AD FTK+L
Sbjct: 1282 DNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIVTKFVKSNDQLADIFTKSLTCPR 1341
Query: 1376 FNILLSKMGLINIYQP 1391
N + +K+G ++Y P
Sbjct: 1342 INYICNKLGTYDLYAP 1357
>UniRef100_O23741 SLG-Sc and SLA-Sc genes and Melmoth retrotransposon sequence
[Brassica oleracea]
Length = 1131
Score = 751 bits (1939), Expect = 0.0
Identities = 429/1136 (37%), Positives = 639/1136 (55%), Gaps = 81/1136 (7%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L KNK+GF++G + PD D W RCN +V+SWL+NSVS I ++I+ + A ++
Sbjct: 47 ALDAKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADI 106
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF + R NL I +LKQGS S+ DY+T +K LW+ L S
Sbjct: 107 WRDLHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDYYTTLKTLWDNLESVDEPDT----- 161
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
PC C ++ + + +I++FL GLND ++I+R Q+++ LPSL +VY+++ Q++S
Sbjct: 162 PCVCGNAEKLQKKVDRAKIVKFLAGLNDSYAIIRRQIIMKKVLPSLVEVYNILDQDDSQK 221
Query: 184 ASLSSLS-----VSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYL 238
++++ VS++ + + + Q G N +P +C+F NR H + CY
Sbjct: 222 GFSTAITPAAFNVSENVPPPMAEAGICYVQ-TGPNKGRP----ICSFCNRVGHIAERCYK 276
Query: 239 KHGYP----NVNKAQPRVNAVTH-EDVDAGTSSS---IGQGSSTSSN--AGFSQEQLVQL 288
KHG+P + K+Q + + + V A S S GQ T + S+EQL Q
Sbjct: 277 KHGFPPGFVSKYKSQSSGDRLQKPKQVAAQVSFSPPNSGQSPMTMDHLVGNHSKEQLQQF 336
Query: 289 ASLL--QQANLVV---PASSSSQASSNH-ISANPLISTTISAPESSSAGIIPKPSYWLLD 342
+L Q N+ + ASSS Q N IS NP I S + + W++D
Sbjct: 337 IALFSSQLPNVTMGSNEASSSKQPMDNSGISFNPTTLVFIGLLTVSRHTLANET--WIID 394
Query: 343 SGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTH 402
SGA H+ + S ++S V+LPN V + G V + L +VLY P F
Sbjct: 395 SGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIVQLNEHITLHNVLYIPEFRL 454
Query: 403 NLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSV 462
NL+S++ L + + F + C IQD IG +++ LY S
Sbjct: 455 NLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYVLDVKS---------- 504
Query: 463 SHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-CDLC 521
S N V IS LWH RLGH S+ RL +S N D C +C
Sbjct: 505 SPMKINAVVDIS-----------LWHKRLGHPSYTRLDKISEALGTTKHKNKGDAHCHVC 553
Query: 522 HFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLK 581
H AK K L ++S + +F+LLH+D+WGP S+ ++ G++YFLTIVDDHSR W+ LL+
Sbjct: 554 HLAKQKKLSYSSQNHICTASFQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATWIYLLQ 613
Query: 582 SKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNG 641
SK++V F+ I+TQ++ K +R DN PE + + GI+ SC ET +QN
Sbjct: 614 SKSDVLHIFPTFVNQIETQYNTKIKSVRRDNAPELSFTELFKEKGIVSYHSCPETLEQNS 673
Query: 642 RVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLP 701
+ERKHQH+LNV RAL+FQS++P +W +L A FLINR P+P+L N+SPY VL + P
Sbjct: 674 VLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAP 733
Query: 702 ALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVT 761
+ + FGCLCY ST R K PR+R +FLGY SG+KG+ L D++S +I++SR+VT
Sbjct: 734 QYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVT 793
Query: 762 FHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPPPPP 821
FHE P + +F P + P+ PSP I+ P
Sbjct: 794 FHEDIFPMAKHQKMDESSLHFF-----------PPKVTVPS------APSPNIS---SSP 833
Query: 822 IPVVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINNYISHHNLSNNYSSFVMSLHTTT 881
+SP + S RQ T P++L+D+ C ++H S YPI++ +S+ +S+++ +++ S+
Sbjct: 834 FSTLSP--QISKRQRTVPAHLKDFHCYSVHDSAYPISSTLSYSQISSHHLAYINSITNIP 891
Query: 882 EPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIE 941
P+SYAE + W ++ EL A+E+ TW +V LP K IGCRW++ +K++ADG++E
Sbjct: 892 IPQSYAEVRQSKEWTESADKELDAMEENDTWDVVPLPKGKKAIGCRWVHTLKFNADGTLE 951
Query: 942 RHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDL 1001
R K+RLV KGY Q EGLDY +T+SPVAK+ T++L++ + + W LHQLD++NAFL+G+L
Sbjct: 952 RRKSRLVGKGYTQKEGLDYIETFSPVAKMATVKLLLKVGASKKWFLHQLDISNAFLNGEL 1011
Query: 1002 QEDVYMLIPPGIKSNK----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSD 1057
E++YM +P G K PN VCKL+KS+YGLKQASR+W++K ++ L + +A D
Sbjct: 1012 DEEIYMKLPEGYAERKGDLPPNAVCKLKKSIYGLKQASRQWFKKFSTSLFQLGFQKAHGD 1071
Query: 1058 HSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLG 1113
H+LFV++T + F +LVYVDDI+IA +KS L + FK++DLG LKYF G
Sbjct: 1072 HTLFVRQTENDFVAVLVYVDDIVIASTDDAVAVKLKSDLKSFFKLRDLGSLKYFFG 1127
>UniRef100_Q94LA8 Polyprotein, putative [Arabidopsis thaliana]
Length = 1459
Score = 714 bits (1842), Expect = 0.0
Identities = 483/1467 (32%), Positives = 721/1467 (48%), Gaps = 169/1467 (11%)
Query: 15 NGVIPIPDADDLNRAA--------WERCNHLVQSWLINSVSDSIAQTIVFYDTAFEVWHD 66
N V+ P+ +N W+R + L+ S LI ++S ++ + + ++W
Sbjct: 60 NSVVIPPETTTINSVVSANPSFTLWKRQDKLIFSALIGAISPAVQSLVSRATNSSQIWST 119
Query: 67 LQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIHPCR 126
L ++K I LR I L +G+K++ +Y ++LA
Sbjct: 120 LNNTYAKPSYGHIKQLRQQIQRLTKGTKTIDEYVQSHTTRLDQLAI-------------- 165
Query: 127 CEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNNASL 186
+ K +E+Q+ L GL +++ V Q+ D P++ +++ ++ ES S
Sbjct: 166 -----LGKPMEHEEQVEHILKGLPEEYKTVVDQIEGKDNTPTITEIHERLINHESKLLS- 219
Query: 187 SSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYPNVN 246
+ S + NA R F + T +N TN
Sbjct: 220 DEVPPSSSFPMSANAVQQRNFNNNCNQNQHKNRYQGNTHNNNTN---------------T 264
Query: 247 KAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQANLVVPASSSSQ 306
+QP T+ T S G S + QL ++ +PASSS
Sbjct: 265 NSQPS----TYNKSGQRTFKPYLGKCQICSVQGHSARRCPQLQAMQ------LPASSS-- 312
Query: 307 ASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSFYRIPP-V 365
A S P + I +P +++ WLLDSGA HI+ +L+ S
Sbjct: 313 AHSPFTPWQPRANLAIGSPYAANP--------WLLDSGATHHITSDLNALSLHQPYNGGE 364
Query: 366 YVSLPNKTCVLVQYAGTVSFTS---NFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTS 422
YV + + T + ++ G+ S + L VLY P NLISV +LC + S+ F
Sbjct: 365 YVMIADGTGLTIKQTGSTFLPSQNRDLALHKVLYVPDIRKNLISVYRLCNTNQVSVEFFP 424
Query: 423 AHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSSSSIP 482
A ++D + ++ + D LY++ ++ + ++F+S S K+ T+S
Sbjct: 425 ASFQVKDLNTGTLLLQGRTKDDLYEWPVTNPPATALFTSPSPKT-----TLSS------- 472
Query: 483 SNALWHFRLGHLSHQRLHSMSLLY--PNIISSNNKDVCDLCHFAKHKHLPFNSSISHAST 540
WH RLGH S L+++ + P ++S+NK C C K LPF +S H+S+
Sbjct: 473 ----WHSRLGHPSASILNTLLSKFSLPVSVASSNKTSCSDCLINKSHKLPFATSSIHSSS 528
Query: 541 NFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQ 600
E + D+W I S ++Y+L +VD ++R+ W+ L+ K++V I F +++ +
Sbjct: 529 PLEYIFTDVWTS-PIISHDNYKYYLVLVDHYTRYTWLYPLQQKSQVKATFIAFKALVENR 587
Query: 601 FHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLF 659
F + + +DNG EF+ L F S+GI H S TP+ NG ERKH+HI+ G LL
Sbjct: 588 FQAKIRTLYSDNGGEFIALRDFLVSNGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLT 647
Query: 660 QSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQ 719
Q+ +P +W+YA AV+LINR+PTP+L QSP+ L P +VFGCLC+
Sbjct: 648 QASVPREYWTYAFATAVYLINRMPTPVLCLQSPFQKLFGSSPNYQRLRVFGCLCFPWLRP 707
Query: 720 SHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPY---------- 769
R KL+ R+++ +FLGY + D+ + ++ SRHV F E+ P+
Sbjct: 708 YTRNKLEERSKRCVFLGYSLTQTAYLCLDVDNNRLYTSRHVMFDESTYPFAASIREQSQS 767
Query: 770 -----PHTSLSTTPNWEYFSSS---------------------NFSDVS----NQPTPIN 799
P +S S++P F S N S VS PTP +
Sbjct: 768 SLVTPPESSSSSSPANSGFPCSVLRLQSPPASSPETPSPPQQQNDSPVSPRQTGSPTPSH 827
Query: 800 SPAIIDDILPPSPPI-------------------NP------PPPPPIPVVSPAS----R 830
+ D L PSP + NP P P P P +P+S R
Sbjct: 828 HSQVRDSTLSPSPSVSNSEPTAPHENGPEPEAQSNPNSPFIGPLPNPNPETNPSSSIEQR 887
Query: 831 TSTRQTTT---PSYLQDYVCNNIHTSPYPINNYISHHNLSNNYS--------SFVMSLHT 879
+ TTT P+ +N + P P NN+ NN + + ++
Sbjct: 888 PVDKSTTTALPPNQTTIAATSNSRSQP-PKNNHQMKTRSKNNITKPKTKTSLTVALTQPH 946
Query: 880 TTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGS 939
+EP + +A K W+ AM E A ++ TW LV +GCRW++K+KY +G
Sbjct: 947 LSEPNTVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPPNPTQHLVGCRWVFKLKYLPNGL 1006
Query: 940 IERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHG 999
I+++KARLVAKG+NQ G+DY +T+SPV K TTIR+V+ ++ NW L QLDVNNAFL G
Sbjct: 1007 IDKYKARLVAKGFNQQYGVDYAETFSPVIKATTIRVVLDVAVKKNWPLKQLDVNNAFLQG 1066
Query: 1000 DLQEDVYMLIPPG-IKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDH 1058
L E+VYM PPG + ++P+ VC+L+K++YGLKQA R WY +L L + ++ + +D
Sbjct: 1067 TLTEEVYMAQPPGFVDKDRPSHVCRLRKAIYGLKQAPRAWYMELKQHLLNIGFVNSLADT 1126
Query: 1059 SLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAH 1118
SLF+ ++ LLVYVDDII+ G + + S L F IKD L YFLGIE
Sbjct: 1127 SLFIYSHGTTLLYLLVYVDDIIVTGSDHKSVSAVLSSLAERFSIKDPTDLHYFLGIEATR 1186
Query: 1119 SKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLL 1178
+ G+ L QRKY DLLA +D+KPV+TP +S KL D YR +VG L
Sbjct: 1187 TNTGLHLMQRKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQ 1246
Query: 1179 YLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFS 1238
YL TRPDI F +LSQF+ QPT H AA RVLRYL G G+F +S I+L FS
Sbjct: 1247 YLAFTRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFS 1306
Query: 1239 DADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILY 1298
DADWAG S + +LG + ISW +KKQ VSRSS+E+EYRA+A+A E++W+
Sbjct: 1307 DADWAGDSADYVSTNAYVIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCS 1366
Query: 1299 LLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVS 1358
LL ++HI P P ++CDN A +I ANPVFH R KH+ +D H VR +Q+ L++ VS
Sbjct: 1367 LLTELHIRLPHGPTIFCDNIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVS 1426
Query: 1359 SQDQVADFFTKALLPKPFNILLSKMGL 1385
+ DQ+AD TK+L F SK+G+
Sbjct: 1427 TNDQLADALTKSLSRPHFLSARSKIGV 1453
>UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa]
Length = 1688
Score = 696 bits (1797), Expect = 0.0
Identities = 426/1111 (38%), Positives = 605/1111 (54%), Gaps = 73/1111 (6%)
Query: 327 SSSAGIIPKPSY-WLLDSGANEHISCNLSFFSSFYRIPP-VYVSLPNKTCVLVQYAGTVS 384
SS + + P S W+LDSGA+ H+S + S+ +S + V N T V + G++S
Sbjct: 171 SSISTVTPIASQPWILDSGASFHMSFDDSWLTSCRLVKNGATVHTANGTLCKVTHQGSIS 230
Query: 385 FTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLA---KQ 441
+ F + +V P + NLISV +L ++ + + F C +QD + +IG K+
Sbjct: 231 -SPQFTVPNVSLVPKLSMNLISVGQLTDTNCF-VGFDDTSCFVQDRHTGAVIGTGHRQKR 288
Query: 442 LDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHS 501
GLY S S+S N + S S++ S WH RLGHL RL
Sbjct: 289 SCGLYILDSLSLPSSST---------NTPSVYSPMCSTACKSFPQWHHRLGHLCGSRL-- 337
Query: 502 MSLLYPNIISSNNKD---VCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASV 558
+L+ ++ S D VC C K LP+ SS S +S F+L+H D+WG S
Sbjct: 338 ATLINQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSK 397
Query: 559 HGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFML 618
GH Y++ VDD+SR+ W+ +K ++++ + +F MI TQF + R+D+G E+M
Sbjct: 398 GGHNYYVIFVDDYSRYTWIYFMKHRSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGEYMS 457
Query: 619 STF---YASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHA 675
+ F S G + Q SC QNG ERKH+HI+ R LL S +P FW+ AI A
Sbjct: 458 NAFREFLVSQGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAISTA 517
Query: 676 VFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFL 735
V+LIN P+ L +SP VL P + +VFGC CY RTKL ++ + +FL
Sbjct: 518 VYLINMQPSSSLQGRSPGEVLFGSPPRYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFL 577
Query: 736 GYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQP 795
GY KG+ YD +R I +SR VTF E P+ ++S + + E +S +F + P
Sbjct: 578 GYSLEHKGYRCYDPSARRIRISRDVTFDEN-KPFFYSSTNQPSSPE--NSISFLYLPPIP 634
Query: 796 TPINSPAIIDDILPPSPPINP--------PPPPPIPVVSPAS------------------ 829
+P + P+ I P PI P PPPPP P SP S
Sbjct: 635 SPESLPS--SPITPSPSPIPPSVPSPTYVPPPPPSPSPSPVSPPPSHIPASSSPPHVPST 692
Query: 830 ------------RTSTRQTTTPSY--LQDYVCNNIHTSPYPINNYISHHNL-SNNYSSFV 874
R + PS L+D C+ +SP P N + L + N FV
Sbjct: 693 ITLDTFPFHYSRRPKIPNESQPSQPTLEDPTCSVDDSSPAPRYNLRARDALRAPNRDDFV 752
Query: 875 MSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKY 934
+ + EP +Y EA WK AM EL ALE+T TW +V LPS+ PI C+W+YKVK
Sbjct: 753 VGV--VFEPSTYQEAIVLPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCKWVYKVKT 810
Query: 935 HADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNN 994
+DG +ER+KARLVA+G+ Q G DY +T++PVA +TT+R +IA+++ +W + Q+DV N
Sbjct: 811 KSDGQVERYKARLVARGFQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTISQMDVKN 870
Query: 995 AFLHGDLQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQA 1054
AFLHGDL E+VYM PPG+++ P V +L+++LYGLKQA R W+ + +SV+ + +
Sbjct: 871 AFLHGDLHEEVYMHPPPGVEA-PPGHVFRLRRALYGLKQAPRAWFARFSSVVLAAGFSPS 929
Query: 1055 SSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGI 1114
D +LF+ +S T+LL+YVDD++I GD L ++K L F + DLG L YFLGI
Sbjct: 930 DHDPALFIHTSSRGRTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGI 989
Query: 1115 EVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLV 1174
EV + G L Q +Y DLLA SG DS+ +TP + ++L D YR LV
Sbjct: 990 EVTSTVDGYYLSQHRYIEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLV 1049
Query: 1175 GRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINL 1234
G L+YL TRPDI + LSQF+S P H+ LRVLRYL+G + LF+ +S + L
Sbjct: 1050 GSLVYLTVTRPDIAYAVHILSQFVSAPISVHYGHLLRVLRYLRGTTTQCLFYAASSPLQL 1109
Query: 1235 QGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQ 1294
+ FSD+ WA RRS++G C FLG SL++W++KKQ VSRSS+EAE RALA+ T E+
Sbjct: 1110 RAFSDSTWASDPIDRRSVTGYCIFLGTSLLTWKSKKQTAVSRSSTEAELRALATTTSEIV 1169
Query: 1295 WILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKL 1354
W+ +LL D +SC L CDN A+ IA +P+ HE TKH+ +D R Q + L
Sbjct: 1170 WLRWLLADFGVSCDVPTPLLCDNTGAIQIANDPIKHELTKHIGVDASFTRSHCQQSTIAL 1229
Query: 1355 LPVSSQDQVADFFTKALLPKPFNILLSKMGL 1385
V S+ QVADFFTKA + + L K+ +
Sbjct: 1230 HYVPSELQVADFFTKAQTREHHRLHLLKLNV 1260
>UniRef100_Q5XWK9 Gag-pol polyprotein-like [Solanum tuberosum]
Length = 1212
Score = 696 bits (1795), Expect = 0.0
Identities = 429/1280 (33%), Positives = 661/1280 (51%), Gaps = 133/1280 (10%)
Query: 8 KNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEVWHDL 67
K G+I+G P P D W+ + V +W++ S+ I + Y T +W L
Sbjct: 32 KELWGYIDGSDPAP-TDATKLGEWKIKDARVMTWILGSIDPLIVLNLRPYKTVKAMWDYL 90
Query: 68 QERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELAS--HRPIPNCSCIHPC 125
Q+ +++ + R L I N QG V DYF+ + LW E + IP
Sbjct: 91 QKVYNQDNSARRFQLEYEIANYSQGGLFVQDYFSGFQNLWAEFTDIVYAKIPT------- 143
Query: 126 RCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNNAS 185
E+ V + + + QFL L F +R+ ++ DP PSL+ + +++EE +
Sbjct: 144 --ESLSVIQAVHEQSKRDQFLMKLRSDFESIRSNLMNRDPSPSLDVCFRELLREEQRLVT 201
Query: 186 LSSLSVSDDSSIQINASDVRKFQGRGKNPSQPK--------------PTRLCTFSNRTNH 231
+ +D ++ A +G+G++ S+ + + + + H
Sbjct: 202 QNVFKKENDVTVAFAAQG----KGKGRDMSRTQCYSCKEYGHIASNCSKKFYNYCKQQGH 257
Query: 232 TVDFCYLKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASL 291
+ C ++ +N Q R+N T ++ SS+GQ V +
Sbjct: 258 IIKECPMRPQNRRINAFQARINGSTDDN------SSLGQ---------------VLTPEM 296
Query: 292 LQQANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISC 351
+QQ ++V A S+ N +++N +W++DSGA+ H++
Sbjct: 297 VQQ--MIVSAFSALGLQGNDVTSN----------------------FWIVDSGASNHMTN 332
Query: 352 NLSFFSSFYRIP-PVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKL 410
+ S + + P + + N + + + G ++ T +V SP + +LISV +L
Sbjct: 333 STSILKNVRKYQGPSQIQIANGSNLPITKVGDITPT----FKNVFVSPKLSTSLISVGQL 388
Query: 411 CESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVV 470
++ + ++F+ C++QD +S +I ++ L+ H S V
Sbjct: 389 VDN-NCDVNFSRNGCLVQDQVSGTIIAKGPKVGRLFPI---------------HFSIPPV 432
Query: 471 ATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-----CDLCHFAK 525
+ +C S++S +WH RLGH + L +S ++ + NK C C K
Sbjct: 433 LSFACTSTAS--KTEVWHKRLGHPNSVVLSHIS--NSGLLGNKNKFSVASIDCSTCKLGK 488
Query: 526 HKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAE 585
K LPF + S A+ F+++H D+WG I S +YF+T +DD+SRF WV L+SK+E
Sbjct: 489 SKTLPFPNFGSRATKCFDVIHSDVWGISPIISHAHFKYFMTFIDDYSRFTWVYFLRSKSE 548
Query: 586 VSTHVINFITMIQTQFHITPKFIRTDNGPEFM---LSTFYASHGIIHQKSCVETPQQNGR 642
V + F+ I+TQF K +R+D+G E+M F GI+ Q SC TPQQNG
Sbjct: 549 VFSMFKTFLAYIETQFSTCIKLLRSDSGGEYMSYEFKKFLLDKGIVSQHSCPYTPQQNGV 608
Query: 643 VERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPA 702
ERK++H+L+V R LL +S +P +W A+ AV+LINR+P+ +L+ +SPYF L+HQ P
Sbjct: 609 AERKNRHLLDVTRTLLIESSVPSKYWVEALSTAVYLINRLPSKVLNLESPYFRLYHQNPN 668
Query: 703 LNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTF 762
+ F FGC+C+ S KL ++ K F+GY + KGF YD S + +SR+V F
Sbjct: 669 YSDFHTFGCVCFVHLPPSQCNKLSVQSTKCAFMGYSTSQKGFICYDPCSHKFRISRNVVF 728
Query: 763 HET--FLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPPPP 820
E F P S +P F D+S+ + + P P N PPP
Sbjct: 729 FENQYFFPTIVDLSSVSP-----LLPTFEDLSSSFKRFKPGFVYERRRPTLPYPNTDPPP 783
Query: 821 PIPVVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINNYISHHNLSNNYSSFVMSLHTT 880
T P + N+ + P + + + N+ F +L
Sbjct: 784 E---------------TAPQLESE---NSSRSGPLEPTRRSTRVSRTPNWYGFSSTLSNI 825
Query: 881 TEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSI 940
+ P Y++ASKH+CW++AM+ EL AL++ TW +V PSN++PIGC+W+Y +K H+DG++
Sbjct: 826 SVPSCYSQASKHECWQKAMEEELLALKENDTWDIVSCPSNVRPIGCKWVYSIKLHSDGTL 885
Query: 941 ERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGD 1000
+R+KARLV G Q G+DY +T++PVAK+TT+R +IA+++ NW L+Q DV NAFLHGD
Sbjct: 886 DRYKARLVVLGNRQEYGVDYEETFAPVAKMTTVRTIIAIAASQNWSLYQKDVKNAFLHGD 945
Query: 1001 LQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSL 1060
L+ED+YM PP + S+ + VCKL++SLYGLKQA R W++K S L + + D SL
Sbjct: 946 LKEDIYMKPPPDLFSSPTSDVCKLKRSLYGLKQAPRAWFDKFRSTLLQFSFELSKYDSSL 1005
Query: 1061 FVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSK 1120
F++KTS+S +LLVYVDDIII G + T ++ L SF +KDLG L YFLG+EV +
Sbjct: 1006 FLRKTSTSCVLLLVYVDDIIITGTDSSLITCLQQQLKDSFHMKDLGTLTYFLGLEVHNVA 1065
Query: 1121 LGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYL 1180
G+ L Q KY DL++ +G S V TP + ++K ++ D +R+LVG L YL
Sbjct: 1066 SGVFLNQHKYTQDLISLAGLQVSSSVDTPLEMNVKYRREEGDLLPDPTIFRQLVGSLNYL 1125
Query: 1181 NTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDA 1240
TRPDI+F QQ+SQF+ P H A ++RYL G RGLFFP S I L FSD+
Sbjct: 1126 TITRPDISFAVQQVSQFMQAPRHLHLVAVCHIIRYLLGTSTRGLFFPSGSPIRLNAFSDS 1185
Query: 1241 DWAGCLDTRRSISGQCFFLG 1260
DWAGC DTRRS+SG C FLG
Sbjct: 1186 DWAGCPDTRRSVSGWCMFLG 1205
>UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 675 bits (1741), Expect = 0.0
Identities = 414/1193 (34%), Positives = 610/1193 (50%), Gaps = 114/1193 (9%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L K K GFING I P D+ + W+ N ++ W+ S+ + T+ F A ++
Sbjct: 59 ALQAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQL 118
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W +L++RFS +++ + +++ + +Q + V+DY+ + LWEE ++PI C C
Sbjct: 119 WSELKQRFSVGNKVHVHQIKTQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKC-G 177
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
C C A+ R E++I QF+ GL+D +F + ++ +DP PSL ++YS VV+EE
Sbjct: 178 LCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQR 237
Query: 183 NASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTR--LCTFSNRTNHTVDFCYLKH 240
AS+ + + GR + R LC+ R+ H C+
Sbjct: 238 LASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIV 297
Query: 241 GYPNVNKAQPRVNAVTHEDVDAGTSSSIGQG--SSTSSNAGFSQEQLVQLASLLQQANLV 298
G+P+ R N SSS G+G SS S+N+G + Q+ + +
Sbjct: 298 GFPDW--WTERTNG------GGRGSSSRGRGGRSSGSNNSGRGRGQVTAAHATTSNLSPF 349
Query: 299 VPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSS 358
+ + N T+ G + +LD+GA+ H++ LS ++
Sbjct: 350 PEFTPDQLRVITQMIQNKNNGTSDKLSGKMKLGDV------ILDTGASHHMTGQLSLLTN 403
Query: 359 FYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSL 418
IP V + GT + LS+VLY PA +LISV+KL + +
Sbjct: 404 IVTIPSCSVGFADGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLA 463
Query: 419 HFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSS 478
FT C++QD S +IG ++ DG+Y T + AT + +
Sbjct: 464 LFTDTICVLQDRFSRTLIGTGEERDGVYYLTDA-------------------ATTTVHKV 504
Query: 479 SSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHA 538
+ALWH RLGH S L S+ L + S +++ CD+C AK F S + +
Sbjct: 505 DITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRS-CDVCFRAKQTREVFPDSSNKS 563
Query: 539 STNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQ 598
+ F L+H D+WGP + S G YFLTIVDD SR +W LL +K+EV + + NF+ +
Sbjct: 564 TDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTE 623
Query: 599 TQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRAL 657
QF + K IR+DNG EFM LS+++ GI+HQ SCV TPQQNGRVERKH+HILNV RAL
Sbjct: 624 KQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRAL 683
Query: 658 LFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYAST 717
LFQ+ LP FW A++ A +LINR P+ I + SPY +LH P + +VFG CYA
Sbjct: 684 LFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHR 743
Query: 718 LQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPY-------- 769
+ + K R+R IF+GY G KG+ +YD+ + E VSR V F E PY
Sbjct: 744 VTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTI 803
Query: 770 ----------------PHTSLSTTPNWEYFSS------SNFSDVSNQ-PTPINSPAIIDD 806
P T+L + E + S +N S+ + TP + P +DD
Sbjct: 804 YTPPVTCPITYDEDWLPFTTLEDRGSDENYLSDPPVCVTNVSESDTEHDTPQSLPTPVDD 863
Query: 807 ILPPSPPINPPPPP--------PIPVVSPASRTST------------RQTTTPSYLQDYV 846
L PS + P P P VSP + +T RQ P+ L+DY+
Sbjct: 864 PLSPSTSVTPTQTPTNSSSSTSPSTNVSPPQQDTTPIIENTPPRQGKRQVQQPARLKDYI 923
Query: 847 CNNIHTSP----------------------YPINNYISHHNLSNNYSSFVMSLHTTTEPK 884
N +P YP+ +YIS S + F+ ++ EPK
Sbjct: 924 LYNASCTPNTPHVLSPSTSQSSSSIQGNLQYPLTDYISDECFSAGHKVFLAAITANDEPK 983
Query: 885 SYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHK 944
+ E K W AM E+ ALE TW +VDLP+ IG +W+YK K++ADG++ER+K
Sbjct: 984 HFKEDVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYK 1043
Query: 945 ARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQED 1004
ARLV +G NQIEG DY +T++PV K+TT+R ++ L + + W ++Q+DV+NAFLHGDL+E+
Sbjct: 1044 ARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEE 1103
Query: 1005 VYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKK 1064
VYM +PPG + + P++VC+L+KSLYGLKQA R W++KL+ L +IQ D+S F
Sbjct: 1104 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYS 1163
Query: 1065 TSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVA 1117
+LVYVDD+II G+ K L F +KDLG+LKYFLGIEV+
Sbjct: 1164 CKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVS 1216
Score = 191 bits (485), Expect = 1e-46
Identities = 97/225 (43%), Positives = 146/225 (64%)
Query: 1167 IPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFF 1226
+ ++ +GR + F+ ++S+ P +AH AA+R++RYLKG PG+G+
Sbjct: 1188 VQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDAPREAHLEAAMRIVRYLKGSPGQGILL 1247
Query: 1227 PRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRAL 1286
N + L+ + D+D+ C TRRS+S LG S ISW+TKKQ TVS SS+EAEYRA+
Sbjct: 1248 SANKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAM 1307
Query: 1287 ASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREK 1346
+ A E++W+ LL+++ I+ L+CD+++A+ IAANPVFHERTKH+E DCH VR+
Sbjct: 1308 SVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSVRDA 1367
Query: 1347 VQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
V+ GI+ V + +Q+AD FTKAL F L+SK+G+ N++ P
Sbjct: 1368 VRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHTP 1412
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,325,965,993
Number of Sequences: 2790947
Number of extensions: 99779277
Number of successful extensions: 501778
Number of sequences better than 10.0: 2994
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 1397
Number of HSP's that attempted gapping in prelim test: 471319
Number of HSP's gapped (non-prelim): 11031
length of query: 1391
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1251
effective length of database: 457,317,253
effective search space: 572103883503
effective search space used: 572103883503
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)
Medicago: description of AC149471.17