BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149211.1 + phase: 0
(141 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O23192 Hypothetical protein C7A10.430 [Arabidopsis tha... 123 8e-28
UniRef100_Q9FUA4 SPATULA [Arabidopsis thaliana] 123 8e-28
UniRef100_Q5ULY0 Basic helix-loop-helix protein [Fragaria ananassa] 118 3e-26
UniRef100_Q5VRS4 Basic helix-loop-helix protein SPATULA-like [Or... 117 5e-26
UniRef100_Q6K844 Hypothetical protein OJ1548_F12.19 [Oryza sativa] 108 2e-23
UniRef100_Q948F6 Putative SPATULA [Oryza sativa] 108 3e-23
UniRef100_Q680B1 Putative bHLH transcription factor [Arabidopsis... 105 2e-22
UniRef100_Q8LFU9 Hypothetical protein [Arabidopsis thaliana] 104 4e-22
UniRef100_Q9FHA2 Emb|CAB16798.1 [Arabidopsis thaliana] 104 4e-22
UniRef100_O80536 Phytochrome-interacting factor 3 [Arabidopsis t... 100 7e-21
UniRef100_Q8GZM7 Putative bHLH transcription factor [Arabidopsis... 97 6e-20
UniRef100_Q9SL63 Hypothetical protein At2g20180 [Arabidopsis tha... 97 6e-20
UniRef100_Q6AT90 Hypothetical protein OSJNBa0069I13.9 [Oryza sat... 97 8e-20
UniRef100_Q8GRJ1 Transcription factor BHLH9-like protein [Oryza ... 97 1e-19
UniRef100_Q8W2F3 Phytochrome-interacting factor 4 [Arabidopsis t... 95 4e-19
UniRef100_Q7Y1V4 BP-5 protein [Oryza sativa] 94 6e-19
UniRef100_Q7FA23 OSJNBa0058K23.6 protein [Oryza sativa] 94 8e-19
UniRef100_Q84LH8 PIF3 like basic Helix Loop Helix protein [Arabi... 93 1e-18
UniRef100_Q8S3D7 Putative bHLH transcription factor [Arabidopsis... 93 1e-18
UniRef100_Q9LYT0 Hypothetical protein F17J16_110 [Arabidopsis th... 93 1e-18
>UniRef100_O23192 Hypothetical protein C7A10.430 [Arabidopsis thaliana]
Length = 415
Score = 123 bits (309), Expect = 8e-28
Identities = 63/74 (85%), Positives = 68/74 (91%)
Query: 25 ELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDE 84
E PSSK+ P RSSSKR RAAE HNLSEKRRRS+INEK+KALQ+LIPNSNKTDKASMLDE
Sbjct: 179 EAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDE 238
Query: 85 AIEYLKQLQLQVQV 98
AIEYLKQLQLQVQ+
Sbjct: 239 AIEYLKQLQLQVQM 252
>UniRef100_Q9FUA4 SPATULA [Arabidopsis thaliana]
Length = 373
Score = 123 bits (309), Expect = 8e-28
Identities = 63/74 (85%), Positives = 68/74 (91%)
Query: 25 ELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDE 84
E PSSK+ P RSSSKR RAAE HNLSEKRRRS+INEK+KALQ+LIPNSNKTDKASMLDE
Sbjct: 179 EAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDE 238
Query: 85 AIEYLKQLQLQVQV 98
AIEYLKQLQLQVQ+
Sbjct: 239 AIEYLKQLQLQVQM 252
>UniRef100_Q5ULY0 Basic helix-loop-helix protein [Fragaria ananassa]
Length = 298
Score = 118 bits (295), Expect = 3e-26
Identities = 68/99 (68%), Positives = 76/99 (76%), Gaps = 6/99 (6%)
Query: 16 FGLKNDEGSELPSSKAAPPP--RSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNS 73
+ +++EG E +AA RSSSKRSRAAE HNLSEKRRRS+INEK+KALQNLIPNS
Sbjct: 115 YDCESEEGLEALVEEAAVKSGGRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNS 174
Query: 74 NKTDKASMLDEAIEYLKQLQLQVQVSFLSLKMNNQTLKH 112
NKTDKASMLDEAIEYLKQLQLQVQ+ L M N H
Sbjct: 175 NKTDKASMLDEAIEYLKQLQLQVQM----LSMRNGMSLH 209
>UniRef100_Q5VRS4 Basic helix-loop-helix protein SPATULA-like [Oryza sativa]
Length = 315
Score = 117 bits (293), Expect = 5e-26
Identities = 67/95 (70%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
Query: 23 GSELPSSKAAPPPR--SSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKAS 80
GS P + A PR S SKRSRAAE HNLSEKRRRSKINEK+KALQ+LIPNSNKTDKAS
Sbjct: 81 GSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS 140
Query: 81 MLDEAIEYLKQLQLQVQVSFLSLKMNNQTLKHVKY 115
MLDEAIEYLKQLQLQVQ+ L M N + Y
Sbjct: 141 MLDEAIEYLKQLQLQVQM----LSMRNGVYLNPSY 171
>UniRef100_Q6K844 Hypothetical protein OJ1548_F12.19 [Oryza sativa]
Length = 110
Score = 108 bits (271), Expect = 2e-23
Identities = 55/73 (75%), Positives = 63/73 (85%)
Query: 28 SSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIE 87
S + P R KRSRAAE HNLSEKRRRS+INEK+KALQ+LIPNS+KTDKASMLD+AIE
Sbjct: 17 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIE 76
Query: 88 YLKQLQLQVQVSF 100
YLKQLQLQVQ+ +
Sbjct: 77 YLKQLQLQVQMIY 89
>UniRef100_Q948F6 Putative SPATULA [Oryza sativa]
Length = 298
Score = 108 bits (270), Expect = 3e-23
Identities = 55/71 (77%), Positives = 62/71 (86%)
Query: 28 SSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIE 87
S + P R KRSRAAE HNLSEKRRRS+INEK+KALQ+LIPNS+KTDKASMLD+AIE
Sbjct: 17 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIE 76
Query: 88 YLKQLQLQVQV 98
YLKQLQLQVQ+
Sbjct: 77 YLKQLQLQVQM 87
>UniRef100_Q680B1 Putative bHLH transcription factor [Arabidopsis thaliana]
Length = 210
Score = 105 bits (263), Expect = 2e-22
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 36 RSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 95
R+S KRS A+FHNLSEK+RRSKINEK+KALQ LIPNSNKTDKASMLDEAIEYLKQLQLQ
Sbjct: 86 RNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 145
Query: 96 VQ 97
VQ
Sbjct: 146 VQ 147
>UniRef100_Q8LFU9 Hypothetical protein [Arabidopsis thaliana]
Length = 210
Score = 104 bits (260), Expect = 4e-22
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 36 RSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 95
R+S KR+ A+FHNLSEK+RRSKINEK+KALQ LIPNSNKTDKASMLDEAIEYLKQLQLQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 145
Query: 96 VQ 97
VQ
Sbjct: 146 VQ 147
>UniRef100_Q9FHA2 Emb|CAB16798.1 [Arabidopsis thaliana]
Length = 210
Score = 104 bits (260), Expect = 4e-22
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 36 RSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 95
R+S KR+ A+FHNLSEK+RRSKINEK+KALQ LIPNSNKTDKASMLDEAIEYLKQLQLQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 145
Query: 96 VQ 97
VQ
Sbjct: 146 VQ 147
>UniRef100_O80536 Phytochrome-interacting factor 3 [Arabidopsis thaliana]
Length = 524
Score = 100 bits (249), Expect = 7e-21
Identities = 52/71 (73%), Positives = 59/71 (82%), Gaps = 2/71 (2%)
Query: 30 KAAPPPRSS--SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIE 87
K A P R+ SKRSR+AE HNLSE+RRR +INEK++ALQ LIPN NK DKASMLDEAIE
Sbjct: 328 KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 387
Query: 88 YLKQLQLQVQV 98
YLK LQLQVQ+
Sbjct: 388 YLKSLQLQVQI 398
>UniRef100_Q8GZM7 Putative bHLH transcription factor [Arabidopsis thaliana]
Length = 478
Score = 97.4 bits (241), Expect = 6e-20
Identities = 49/82 (59%), Positives = 62/82 (74%)
Query: 24 SELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLD 83
S +K A +S+KRSRAAE HNLSE++RR +INE++KALQ LIP NK+DKASMLD
Sbjct: 265 SRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLD 324
Query: 84 EAIEYLKQLQLQVQVSFLSLKM 105
EAIEY+K LQLQ+Q+ + M
Sbjct: 325 EAIEYMKSLQLQIQMMSMGCGM 346
>UniRef100_Q9SL63 Hypothetical protein At2g20180 [Arabidopsis thaliana]
Length = 490
Score = 97.4 bits (241), Expect = 6e-20
Identities = 49/82 (59%), Positives = 62/82 (74%)
Query: 24 SELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLD 83
S +K A +S+KRSRAAE HNLSE++RR +INE++KALQ LIP NK+DKASMLD
Sbjct: 265 SRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLD 324
Query: 84 EAIEYLKQLQLQVQVSFLSLKM 105
EAIEY+K LQLQ+Q+ + M
Sbjct: 325 EAIEYMKSLQLQIQMMSMGCGM 346
>UniRef100_Q6AT90 Hypothetical protein OSJNBa0069I13.9 [Oryza sativa]
Length = 505
Score = 97.1 bits (240), Expect = 8e-20
Identities = 49/68 (72%), Positives = 56/68 (82%)
Query: 38 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 97
SSKRSR AE HNLSE+RRR +INEK++ALQ LIPN NK DKASML+EAIEYLK LQLQVQ
Sbjct: 330 SSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 389
Query: 98 VSFLSLKM 105
+ + M
Sbjct: 390 MMSMGTGM 397
>UniRef100_Q8GRJ1 Transcription factor BHLH9-like protein [Oryza sativa]
Length = 417
Score = 96.7 bits (239), Expect = 1e-19
Identities = 47/82 (57%), Positives = 63/82 (76%)
Query: 21 DEGSELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKAS 80
D SE+ ++ +R+RAAE HNLSE+RRR +INEKL+ALQ L+P+ NKTDKAS
Sbjct: 206 DSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKAS 265
Query: 81 MLDEAIEYLKQLQLQVQVSFLS 102
+LDEAIEYLK LQ+QVQ+ +++
Sbjct: 266 ILDEAIEYLKSLQMQVQIMWMT 287
>UniRef100_Q8W2F3 Phytochrome-interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 94.7 bits (234), Expect = 4e-19
Identities = 46/68 (67%), Positives = 59/68 (86%)
Query: 38 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 97
S++RSRAAE HNLSE+RRR +INE++KALQ LIP+ +KTDKAS+LDEAI+YLK LQLQ+Q
Sbjct: 252 SNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
Query: 98 VSFLSLKM 105
V ++ M
Sbjct: 312 VMWMGSGM 319
>UniRef100_Q7Y1V4 BP-5 protein [Oryza sativa]
Length = 335
Score = 94.0 bits (232), Expect = 6e-19
Identities = 48/79 (60%), Positives = 63/79 (78%), Gaps = 2/79 (2%)
Query: 29 SKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNL--IPNSNKTDKASMLDEAI 86
++ P ++++RSRAAE HNLSE+RRR +INEK++ALQ L IP+ NKTDKASMLDEAI
Sbjct: 152 ARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAI 211
Query: 87 EYLKQLQLQVQVSFLSLKM 105
EYLK LQLQ++V ++ M
Sbjct: 212 EYLKSLQLQLRVMWMGSGM 230
>UniRef100_Q7FA23 OSJNBa0058K23.6 protein [Oryza sativa]
Length = 181
Score = 93.6 bits (231), Expect = 8e-19
Identities = 44/60 (73%), Positives = 53/60 (88%)
Query: 39 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQV 98
++RSR+AEFHN SE+RRR +INEKLKALQ L+PN KTDK SMLDEAI+YLK LQLQ+Q+
Sbjct: 9 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 68
>UniRef100_Q84LH8 PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
Length = 444
Score = 92.8 bits (229), Expect = 1e-18
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 38 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 97
S++RSRAAE HNLSE+RRR +INE++KALQ LIP+ ++TDKAS+LDEAI+YLK LQ+Q+Q
Sbjct: 251 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
Query: 98 VSFLSLKM 105
V ++ M
Sbjct: 311 VMWMGSGM 318
>UniRef100_Q8S3D7 Putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 92.8 bits (229), Expect = 1e-18
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 38 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 97
S++RSRAAE HNLSE+RRR +INE++KALQ LIP+ ++TDKAS+LDEAI+YLK LQ+Q+Q
Sbjct: 251 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
Query: 98 VSFLSLKM 105
V ++ M
Sbjct: 311 VMWMGSGM 318
>UniRef100_Q9LYT0 Hypothetical protein F17J16_110 [Arabidopsis thaliana]
Length = 442
Score = 92.8 bits (229), Expect = 1e-18
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 38 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 97
S++RSRAAE HNLSE+RRR +INE++KALQ LIP+ ++TDKAS+LDEAI+YLK LQ+Q+Q
Sbjct: 251 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
Query: 98 VSFLSLKM 105
V ++ M
Sbjct: 311 VMWMGSGM 318
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,363,373
Number of Sequences: 2790947
Number of extensions: 7832107
Number of successful extensions: 42938
Number of sequences better than 10.0: 1935
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 901
Number of HSP's that attempted gapping in prelim test: 41535
Number of HSP's gapped (non-prelim): 2046
length of query: 141
length of database: 848,049,833
effective HSP length: 117
effective length of query: 24
effective length of database: 521,509,034
effective search space: 12516216816
effective search space used: 12516216816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC149211.1