BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149210.5 + phase: 0 
         (128 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9FJF4 Arabidopsis thaliana genomic DNA, chromosome 5,...    64  8e-10
UniRef100_Q6ZJ98 Hypothetical protein OJ1734_E04.2 [Oryza sativa]      52  4e-06
UniRef100_Q9LTJ1 Similarity to unknown protein [Arabidopsis thal...    45  3e-04
UniRef100_Q7XLC7 OSJNBa0070C17.22 protein [Oryza sativa]               42  0.003
UniRef100_Q9LKA7 Gb|AAC80581.1 [Arabidopsis thaliana]                  39  0.026
UniRef100_O95983 Methyl-CpG binding protein 3 [Homo sapiens]           38  0.045
UniRef100_Q7XWX3 OSJNBb0058J09.3 protein [Oryza sativa]                38  0.059
UniRef100_Q9Z2D8 Methyl-CpG binding protein 3 [Mus musculus]           37  0.100
UniRef100_Q9SNC0 Hypothetical protein F12A12.100 [Arabidopsis th...    37  0.13
UniRef100_Q8LCG6 Hypothetical protein [Arabidopsis thaliana]           37  0.13
UniRef100_Q6EQ81 Hypothetical protein P0453B09.50 [Oryza sativa]       36  0.17
UniRef100_Q6TGX7 Methyl-CpG binding domain protein 3 [Brachydani...    35  0.50
UniRef100_Q6IQ79 Methyl-CpG binding domain protein 3a [Brachydan...    35  0.50
UniRef100_Q8L791 Hypothetical protein At5g52230 [Arabidopsis tha...    35  0.50
UniRef100_Q9LTJ8 Arabidopsis thaliana genomic DNA, chromosome 5,...    35  0.50
UniRef100_Q6EPE3 Hypothetical protein B1151D08.6 [Oryza sativa]        34  0.84
UniRef100_Q94IQ7 Putative methyl-binding domain protein MBD108 [...    34  0.84
UniRef100_UPI0000436BAF UPI0000436BAF UniRef100 entry                  33  1.1
UniRef100_Q8AYP2 Methyl-CpG binding protein MBD3 [Xenopus laevis]      33  1.1
UniRef100_Q7XWP5 OSJNBa0072D08.3 protein [Oryza sativa]                33  1.1

>UniRef100_Q9FJF4 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10
           [Arabidopsis thaliana]
          Length = 306

 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 3   RSMDVEMEHLNLNRNVMNLREKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIE 62
           RS+     +L  +RN +  + + LQ          +PDGW+VE++PR S+ +HIDR YIE
Sbjct: 147 RSLVSVERYLRESRNSIEQQLRVLQNRRGHSKDFRLPDGWIVEEKPRRSS-SHIDRSYIE 205

Query: 63  PHTGQKFRSLVSVQRYL 79
           P TG KFRS+ +V+RYL
Sbjct: 206 PGTGNKFRSMAAVERYL 222



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)

Query: 22  REKELQIVVQSPSK-VEVPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLN 80
           R K+    V+  SK   +P GW VE+ PR  N ++ID+YY+E  TG++FRSLVSV+RYL 
Sbjct: 99  RTKQDHCGVEYASKGFRLPRGWSVEEVPR-KNSHYIDKYYVERKTGKRFRSLVSVERYLR 157

Query: 81  GGETGDYLPTQRIISENNNNVSSNF 105
             E+ + +  Q  + +N    S +F
Sbjct: 158 --ESRNSIEQQLRVLQNRRGHSKDF 180



 Score = 53.9 bits (128), Expect = 8e-07
 Identities = 28/65 (43%), Positives = 39/65 (59%), Gaps = 1/65 (1%)

Query: 22 REKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNG 81
          RE +LQI   +    ++  GW V  RPR SN   +D Y+IEP TG++F SL ++ R+L  
Sbjct: 15 RETQLQIADPTSFCGKIMPGWTVVNRPRSSNNGVVDTYFIEPGTGRQFSSLEAIHRHL-A 73

Query: 82 GETGD 86
          GE  D
Sbjct: 74 GEVND 78


>UniRef100_Q6ZJ98 Hypothetical protein OJ1734_E04.2 [Oryza sativa]
          Length = 422

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 31/74 (41%), Positives = 42/74 (55%), Gaps = 8/74 (10%)

Query: 38  VPDGWLVEQRPRPSNPN-HIDRYYIEPHTGQKFRSLVSVQRYLNGGETGDYL--PTQRII 94
           +PDGW  E RPR +  N   D YYI+P +G +FRSL  V R+L  G+    +  P +R I
Sbjct: 343 LPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTI 402

Query: 95  S-----ENNNNVSS 103
                 EN ++VSS
Sbjct: 403 QDPCTIENQSHVSS 416


>UniRef100_Q9LTJ1 Similarity to unknown protein [Arabidopsis thaliana]
          Length = 225

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 32  SPSKVEVPDGWLVEQRPRPSNPN--HIDRYYIEPHTGQKFRSLVSVQRYLNGG 82
           +P    +P GW VE + R S      +D+YY EP+TG+KFRS   V  YL  G
Sbjct: 75  APGDNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHG 127


>UniRef100_Q7XLC7 OSJNBa0070C17.22 protein [Oryza sativa]
          Length = 438

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/54 (40%), Positives = 29/54 (52%), Gaps = 3/54 (5%)

Query: 33 PSKVEVPDGWLVEQRPRPSNPNHI---DRYYIEPHTGQKFRSLVSVQRYLNGGE 83
          P+   +P GWL E RPR +        D +YI+P    +FRS   VQRYL  G+
Sbjct: 30 PAGEGLPHGWLKEYRPRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGD 83


>UniRef100_Q9LKA7 Gb|AAC80581.1 [Arabidopsis thaliana]
          Length = 1145

 Score = 38.9 bits (89), Expect = 0.026
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 1   MNRSMDVEMEHLNLNRNVMNLREKE--LQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDR 58
           +N    V    L +++  + +  KE    ++ +   KV     W +E+R R +   H+D 
Sbjct: 213 LNNGSKVSPNELIMSKTCLKIDPKEDPRPLLYKYVCKVLTAARWKIEKRERSAGRKHVDT 272

Query: 59  YYIEPHTGQKFRSLVSVQRYLNG 81
           +YI P  G+KFR   S  + L G
Sbjct: 273 FYISPE-GRKFREFGSAWKALGG 294


>UniRef100_O95983 Methyl-CpG binding protein 3 [Homo sapiens]
          Length = 291

 Score = 38.1 bits (87), Expect = 0.045
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P GW  E+ PR S  +  H D +Y  P +G+KFRS   + RYL G     T D+   + 
Sbjct: 11  LPQGWEREEVPRRSGLSAGHRDVFYYSP-SGKKFRSKPQLARYLGGSMDLSTFDFRTGKM 69

Query: 93  IISENNNN 100
           ++S+ N +
Sbjct: 70  LMSKMNKS 77


>UniRef100_Q7XWX3 OSJNBb0058J09.3 protein [Oryza sativa]
          Length = 385

 Score = 37.7 bits (86), Expect = 0.059
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 38  VPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGETGDYLPTQRIISEN 97
           +P GW++E R    N N + ++Y+ P  G +  S   V  Y+N  E   +       +  
Sbjct: 125 LPKGWIIEVRAGGKNMNKMYKFYVYPPAGVRLFSKEDVLLYINKSEITGFDTNGECDTRT 184

Query: 98  NNNVSSNFTF 107
            +N+ +N  F
Sbjct: 185 KDNILANVEF 194



 Score = 35.4 bits (80), Expect = 0.29
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 23  EKELQIVVQSPSKVE-----VPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQR 77
           +KE+Q  V+   + E     +PDGW++E      +   I RYY  P +G  F     V +
Sbjct: 25  KKEIQQDVEDLEEEEERPGWLPDGWIMEVYQ--GDDGTIYRYYTSPISGLTFTMKSEVLQ 82

Query: 78  YLNGGETGDYLPTQRIISEN---NNNVSSNFTFT 108
           YL  G    +L ++   ++N   NN+V  + T T
Sbjct: 83  YLFSGMDERFLESKNCAADNQLINNSVYVSPTMT 116


>UniRef100_Q9Z2D8 Methyl-CpG binding protein 3 [Mus musculus]
          Length = 285

 Score = 37.0 bits (84), Expect = 0.100
 Identities = 23/68 (33%), Positives = 37/68 (53%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P GW  E+ PR S  +  H D +Y  P +G+KFRS   + RYL G     T D+   + 
Sbjct: 11  LPQGWEREEVPRRSGLSAGHRDVFYYSP-SGKKFRSKPQLARYLGGSMDLSTFDFRTGKM 69

Query: 93  IISENNNN 100
           ++++ N +
Sbjct: 70  LMNKMNKS 77


>UniRef100_Q9SNC0 Hypothetical protein F12A12.100 [Arabidopsis thaliana]
          Length = 182

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 20/47 (42%), Positives = 25/47 (52%), Gaps = 2/47 (4%)

Query: 38 VPDGWLVEQRPRPSNPNH--IDRYYIEPHTGQKFRSLVSVQRYLNGG 82
          +P  W  E R R S      +D++Y EP TG+KFRS   V  YL  G
Sbjct: 35 LPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81


>UniRef100_Q8LCG6 Hypothetical protein [Arabidopsis thaliana]
          Length = 182

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 20/47 (42%), Positives = 25/47 (52%), Gaps = 2/47 (4%)

Query: 38 VPDGWLVEQRPRPSNPNH--IDRYYIEPHTGQKFRSLVSVQRYLNGG 82
          +P  W  E R R S      +D++Y EP TG+KFRS   V  YL  G
Sbjct: 35 LPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81


>UniRef100_Q6EQ81 Hypothetical protein P0453B09.50 [Oryza sativa]
          Length = 293

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 23/65 (35%), Positives = 30/65 (45%), Gaps = 2/65 (3%)

Query: 29  VVQSPSKVEV-PDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGETGDY 87
           ++  P K EV P GW +E   R       D+YY       KFRS   VQ +L+ G+    
Sbjct: 151 ILVHPRKDEVDPTGWDIENHLRNDQKTK-DKYYRHKDYNHKFRSKPEVQYFLDTGKAAGA 209

Query: 88  LPTQR 92
            P QR
Sbjct: 210 TPIQR 214


>UniRef100_Q6TGX7 Methyl-CpG binding domain protein 3 [Brachydanio rerio]
          Length = 273

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P+GW +E+  R S  +    D YY  P TG+KFRS   + RYL       + D+   + 
Sbjct: 11  LPNGWKMEEVTRKSGLSAGKSDVYYFSP-TGKKFRSKPQLVRYLGKSMDLSSFDFRTGKM 69

Query: 93  IISENNNN 100
           ++S+ N N
Sbjct: 70  LMSKLNKN 77


>UniRef100_Q6IQ79 Methyl-CpG binding domain protein 3a [Brachydanio rerio]
          Length = 273

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P+GW +E+  R S  +    D YY  P TG+KFRS   + RYL       + D+   + 
Sbjct: 11  LPNGWKMEEVTRKSGLSAGKSDVYYFSP-TGKKFRSKPQLVRYLGKSMDLSSFDFRTGKM 69

Query: 93  IISENNNN 100
           ++S+ N N
Sbjct: 70  LMSKLNKN 77


>UniRef100_Q8L791 Hypothetical protein At5g52230 [Arabidopsis thaliana]
          Length = 746

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 16/63 (25%), Positives = 31/63 (48%), Gaps = 2/63 (3%)

Query: 27 QIVVQSPSKVEVPDGWL--VEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGET 84
          +++V+  +   +P+GW+  +E   R       D ++I+P +   F+S     RY+  G  
Sbjct: 28 KVIVEKSAAQGLPEGWIKKLEITNRSGRKTRRDPFFIDPKSEYIFQSFKDASRYVETGNI 87

Query: 85 GDY 87
          G Y
Sbjct: 88 GHY 90


>UniRef100_Q9LTJ8 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19
          [Arabidopsis thaliana]
          Length = 746

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 16/63 (25%), Positives = 31/63 (48%), Gaps = 2/63 (3%)

Query: 27 QIVVQSPSKVEVPDGWL--VEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGET 84
          +++V+  +   +P+GW+  +E   R       D ++I+P +   F+S     RY+  G  
Sbjct: 28 KVIVEKSAAQGLPEGWIKKLEITNRSGRKTRRDPFFIDPKSEYIFQSFKDASRYVETGNI 87

Query: 85 GDY 87
          G Y
Sbjct: 88 GHY 90


>UniRef100_Q6EPE3 Hypothetical protein B1151D08.6 [Oryza sativa]
          Length = 254

 Score = 33.9 bits (76), Expect = 0.84
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 33  PSKVEV-PDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGE 83
           P K EV PDGW+VE   R       D+YY       KFRS   V+ +L+ G+
Sbjct: 171 PRKHEVDPDGWVVEIHLRNDQKTK-DKYYRHKDYNHKFRSKPEVKSFLDTGK 221


>UniRef100_Q94IQ7 Putative methyl-binding domain protein MBD108 [Zea mays]
          Length = 297

 Score = 33.9 bits (76), Expect = 0.84
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 30  VQSPSKVEVPDGWLVEQRPR-PSNPNHIDRYYIEPHTGQKFRSLVSVQRYL 79
           +  P+  + P GW  + R R        D YY  P TG+K RSLV V R+L
Sbjct: 133 IDKPNIAQPPHGWERQIRIRGEGGTKFADVYYTSP-TGRKLRSLVEVDRFL 182


>UniRef100_UPI0000436BAF UPI0000436BAF UniRef100 entry
          Length = 762

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 10  EHLNLNRNVMNLR---EKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEPH 64
           E L  N++V+N R    KE +I++QS  +++ PD +L         P H D  Y  PH
Sbjct: 490 EALQTNQSVINQRFMENKEKEIILQSALEIDQPDHFLQYMSRVKDPPVHQDSLYPGPH 547


>UniRef100_Q8AYP2 Methyl-CpG binding protein MBD3 [Xenopus laevis]
          Length = 283

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/68 (33%), Positives = 34/68 (49%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P GW  E+  R S  +    D YY  P +G+KFRS   + RYL       T D+   + 
Sbjct: 11  LPQGWKKEEVTRRSGLSAGKSDVYYYSP-SGKKFRSKPQLARYLGNSMDLSTFDFRTGKM 69

Query: 93  IISENNNN 100
           ++S+ N N
Sbjct: 70  LMSKINKN 77


>UniRef100_Q7XWP5 OSJNBa0072D08.3 protein [Oryza sativa]
          Length = 505

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 21/85 (24%), Positives = 40/85 (46%), Gaps = 4/85 (4%)

Query: 13 NLNRNVMNLREKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSL 72
          ++  N    ++K+ +++ + P  +  PDGW++E R    +  +I RYY  P +G  F + 
Sbjct: 17 SVEANEAEEKDKDAEVLEELPDWL--PDGWIMEVRC--GDNGNIYRYYTSPVSGYTFSTK 72

Query: 73 VSVQRYLNGGETGDYLPTQRIISEN 97
          +    YL        L +Q    +N
Sbjct: 73 METLHYLFSEMDERVLESQACADDN 97



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 15/46 (32%), Positives = 24/46 (51%)

Query: 38  VPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGE 83
           +PDGW +E R        + ++Y+   TG +F S  +V  Y N G+
Sbjct: 106 LPDGWAIEVRAGGKKMEKMYKFYVHLPTGMRFLSKENVLLYSNEGK 151



 Score = 32.0 bits (71), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (49%), Gaps = 3/59 (5%)

Query: 38  VPDGWLVEQRPRPSNPN-HIDRYYIEPHTGQKFRSLVSVQRYLNGGETGD--YLPTQRI 93
           +P+GW+ E   R  N     D YY +P +   FR+L SV  YL  G+     Y+P + +
Sbjct: 180 LPEGWVKEIIFRKCNDGIRKDPYYTDPVSRHVFRTLKSVINYLETGQITKHAYIPRRSV 238


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.320    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236,082,732
Number of Sequences: 2790947
Number of extensions: 10004811
Number of successful extensions: 22614
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 22572
Number of HSP's gapped (non-prelim): 62
length of query: 128
length of database: 848,049,833
effective HSP length: 104
effective length of query: 24
effective length of database: 557,791,345
effective search space: 13386992280
effective search space used: 13386992280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)