BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149205.5 + phase: 0 /pseudo
         (738 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]              306  2e-81
UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]                 271  5e-71
UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]              258  6e-67
UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcrip...   234  5e-60
UniRef100_Q75GM6 Putative non-LTR retroelement reverse transcrip...   231  8e-59
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip...   229  2e-58
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip...   229  3e-58
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A...   228  5e-58
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip...   228  5e-58
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha...   227  1e-57
UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]                       225  3e-57
UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcrip...   224  5e-57
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip...   224  9e-57
UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]        223  1e-56
UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]                      223  2e-56
UniRef100_O22220 Putative non-LTR retroelement reverse transcrip...   221  5e-56
UniRef100_Q9SLE9 Putative non-LTR retroelement reverse transcrip...   221  8e-56
UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]              218  7e-55
UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis tha...   217  9e-55
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip...   216  2e-54

>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
          Length = 1026

 Score =  306 bits (783), Expect = 2e-81
 Identities = 187/576 (32%), Positives = 296/576 (50%), Gaps = 40/576 (6%)

Query: 169 VKDMQILDGILIANEVVDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWR 228
           +K+  I++G++I +EV++   + K+  +LFKVDFEKAYD V+  ++  +++   FP  W 
Sbjct: 352 LKNRFIMEGVVILHEVLNSIHQKKQSGILFKVDFEKAYDKVNWVFIYRMLKAKGFPDQWC 411

Query: 229 KWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNL 288
            WI + +     ++ VN      F  H+GLRQGDPLSP LF +AAE L +L++   EN+L
Sbjct: 412 DWIMKVVMGGKVAVKVNDQIGSFFKTHKGLRQGDPLSPLLFNLAAEALTLLVQRAEENSL 471

Query: 289 FKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV 348
            +G      N + +  LQ+ADDT+ L      + + L+ +L LF ++SGLK+NFNKS + 
Sbjct: 472 IEGLGTNGDNKIAI--LQYADDTIFLINDKLDHAKNLKYILCLFEQLSGLKINFNKSEVF 529

Query: 349 GVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCF 408
                +      +++  CKVG +   YLG+ I         W+   + ++ +L  WQ   
Sbjct: 530 CFGEAKEKQDLYSNIFTCKVGSLPLKYLGIPIDQKRILNKDWKLAENKMEHKLGCWQGRL 589

Query: 409 LSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSS 468
            S GGRL+LL S L+S+P+Y +SF++ P G+   I+    +F W+  +  RK   + W  
Sbjct: 590 QSIGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGIRKYHLVNWPL 649

Query: 469 VCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEE----ARRLEVG 524
           VC  ++ GGLGV  L   N A++ KW WR L +  G+W  ++ A+Y  +      RL+ G
Sbjct: 650 VCSPRDQGGLGVLDLEAMNKAMLGKWIWR-LENEEGWWQEIIYAKYCSDKPLSGLRLKAG 708

Query: 525 GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARL 584
               S +W+ V ++KD         F    +K+VG+G  TLFW D WLG  P   +F  L
Sbjct: 709 S---SHFWQGVMEVKDD--------FFSFCTKIVGNGEKTLFWEDSWLGGKPLAIQFPSL 757

Query: 585 FDLTTNKMCTVADMYRLGWE--------EGGDAWVWRRRLWAWEEECRSLLDNVRLRLNV 636
           + +   K  T+AD+ R G +         G     WR+ + +WE         + L  N 
Sbjct: 758 YGIVITKRITIADLNRKGIDCMKFRRDLHGDKLRDWRKIVNSWE--------GLNLVENC 809

Query: 637 LDRWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
            D+  W       +TVR  Y+ L    ++     ++ +W  +VPL  + I  W   K+++
Sbjct: 810 KDKLWWTLSKDGKFTVRSFYRALKLQQTSF---PNKKIWKFRVPLK-IRIFIWFFTKNKI 865

Query: 697 PTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
            TK NL +R   +   N C   C   E+  HLF  C
Sbjct: 866 LTKDNLLKRGWRKGD-NKC-QFCDKVETVQHLFFDC 899


>UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]
          Length = 764

 Score =  271 bits (693), Expect = 5e-71
 Identities = 173/567 (30%), Positives = 284/567 (49%), Gaps = 31/567 (5%)

Query: 173 QILDGILIANEVVDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
           Q LDG++I +EV+ E KK KK  ++FK+DFEKAYD V   +L  V+ K  F   W +W+K
Sbjct: 92  QNLDGVVILHEVLHELKKEKKSGIIFKLDFEKAYDKVQWSFLFDVLHKKGFSDRWIQWVK 151

Query: 233 ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
                   ++ +NG   D F  +RG+RQGDPLSP LF + A+ L+ ++ +  +       
Sbjct: 152 MATIGGKMAVNINGEVKDFFKTYRGVRQGDPLSPLLFNLVADALSEMLNNAKQ--AVPHL 209

Query: 293 VVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLVGVNI 352
           V G      ++HLQ+ADDT+L    +  N+  ++ +L  +  MSGLK+N+ KS ++ +  
Sbjct: 210 VPGG-----LTHLQYADDTILFMTNTEENIVTVKFLLYCYEAMSGLKINYQKSEIMVIGG 264

Query: 353 GESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFG 412
            E      A + NC+ GK+ F YLG+ I  +    A  +   + I+ RL+ W+  +LS+G
Sbjct: 265 DEMETQRVADLFNCQAGKMPFTYLGIPISMNKLTNADLDIPPNKIEKRLATWKCGYLSYG 324

Query: 413 GRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLK 472
           G+ +L+ S L+S+P+Y +  +  P G+ + ++S+  +FFW G E  RK   I W ++C  
Sbjct: 325 GKAILINSCLSSIPLYMMGVYLLPEGVHNKMDSIRARFFWEGLEKKRKYHMIKWEALCRP 384

Query: 473 KEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARR-LEVGGRSVSSW 531
           KEFGGLG    R+ N+AL+ KW +RL   +      +L  +Y ++     +      S +
Sbjct: 385 KEFGGLGFIDTRKMNIALLCKWIYRLESGKEDPCCVLLRNKYMKDGGGFFQSKAEESSQF 444

Query: 532 WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLTTNK 591
           WK + ++K         W     S  VG+G  T FW D W+G+ P   ++  ++ +  +K
Sbjct: 445 WKGLHEVKK--------WMDLGSSYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADK 496

Query: 592 MCTVADMYRLG-WEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQ---WDPDTI 647
             TV+ M   G W       +  R L  W +     L N    +++ +      W     
Sbjct: 497 EKTVSQMCLEGDWYIELRRSLGERDLNEWND-----LHNTPREIHLKEERDCIIWKLTKN 551

Query: 648 DVYTVRGVYQILTTSVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRLPTKTNLQRRDC 707
             Y  + +YQ L+       V  D  +W   +PL  V I+ W +LK R+     L++   
Sbjct: 552 GFYKAKTLYQALSFGGVKDKVMQD--LWRSSIPLK-VKILFWLMLKGRIQAAGQLKK--- 605

Query: 708 LQATVNTCVSGCGIAESASHLFLHCEV 734
           ++ + +     CG  E   HL   C +
Sbjct: 606 MKWSGSPNCKLCGQTEDVDHLMFRCHI 632


>UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]
          Length = 593

 Score =  258 bits (658), Expect = 6e-67
 Identities = 179/560 (31%), Positives = 276/560 (48%), Gaps = 27/560 (4%)

Query: 175 LDGILIANEVVDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIKEC 234
           ++G +I +E + E  K KK+ ++ K+DFEKAYD VD  +L   ++   F   W KWI + 
Sbjct: 1   MEGAIILHETLHEMHKRKKDGVILKLDFEKAYDKVDWKFLQQTLRMKGFEPRWCKWIDQV 60

Query: 235 ISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGYVV 294
           +   + ++ VN    + F   +GLRQGDPLSP LF + A+ L VL++   E+    G + 
Sbjct: 61  VRGGSVAVKVNDEIGNFFQTKKGLRQGDPLSPLLFNLVADMLAVLIQRTSEHGKIHGVIP 120

Query: 295 GASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLVGVNIGE 354
              +  + S LQ+ADDT+L  E    + + L+ VL+ F  +SGLK+NF+KS L+      
Sbjct: 121 HLVDDGL-SILQYADDTILFMEHDLEDAKNLKLVLSAFERLSGLKINFHKSELLCFGKAI 179

Query: 355 SWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFGGR 414
               E A +  CK G     YLGL +         W+ V    + RL  W+   LS GGR
Sbjct: 180 EVEREYALLFGCKTGSYTLKYLGLPMHYRKLSNKDWKEVEERFQKRLGSWKGKLLSVGGR 239

Query: 415 LVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLKKE 474
           LVL+ SVL+SL +Y LSFF+ P GII  ++   ++FFW+  E  +K     WS +C  KE
Sbjct: 240 LVLINSVLSSLAMYMLSFFEVPKGIIKKLDYYRSRFFWQSDEHKKKYRLARWSVLCKPKE 299

Query: 475 FGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV-GGRSVSSWWK 533
            GGLG++     NL + +K   R L      W  +L  +Y  +   ++V   R  S +W 
Sbjct: 300 CGGLGIQ-----NLEVQNKCLLRGLAKL--VWQNLLRKKYLAKKTIMQVQKQRGDSHFWT 352

Query: 534 EVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLTTNKMC 593
            +  +KD         F    S  + DG    FW D WLG+    + +  L++L  NK  
Sbjct: 353 GLMGVKD--------TFSSFGSFKLQDGLQIRFWEDCWLGNQSLEKIYPSLYNLVRNKNV 404

Query: 594 TVAD-MYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQWDPDTIDVYTV 652
            VA  + R+         +    L AW E   +++D + LR    DR+ WD      +TV
Sbjct: 405 VVAKVLERVPLNVSFRRAIIGDNLKAWHEIVANVVD-INLR-GQKDRFTWDASKNGTFTV 462

Query: 653 RGVYQILTTSVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRLPTKTNLQRRDCLQATV 712
             +Y+ L   +   ++     +W  ++PL  + I  W L +  + TK NL +R   + ++
Sbjct: 463 NSMYKKL---MFGNVIPRQSFIWKLRLPLK-IKIFLWYLKEGVILTKDNLAKRR-WKGSL 517

Query: 713 NTCVSGCGIAESASHLFLHC 732
             C   C   E+  +LF  C
Sbjct: 518 RCCF--CRSHETIQYLFFDC 535


>UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score =  234 bits (598), Expect = 5e-60
 Identities = 179/591 (30%), Positives = 281/591 (47%), Gaps = 64/591 (10%)

Query: 174 ILDGILIANEVVDE--AKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWI 231
           I D ILIA+E++     KK  +  +  K+D  KA+D ++ G+++A+M++M F   W  WI
Sbjct: 2   ITDNILIAHELIHSLHTKKLVQPFVATKLDITKAFDKIEWGFIEAIMKQMGFSEKWCNWI 61

Query: 232 KECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKG 291
             CI+TTT SIL+NG P       RG+RQGDP+SP+L+++  EGL+ L+++ ++     G
Sbjct: 62  MTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQLHG 121

Query: 292 YVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS-LLVGV 350
           +   + N   +SHL FA D+L+  + +      L  VL L+ + SG  VNF KS +L G 
Sbjct: 122 FKA-SRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGK 180

Query: 351 NIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLS 410
            +      + + +L     +    YLGL       K   +  +  T+  ++  W +  LS
Sbjct: 181 GLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLLS 240

Query: 411 FGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVC 470
             G+ VL+KS++T++P Y++S F  P  +I  I S    F+W  ++   KI W+AWS + 
Sbjct: 241 PAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLN 300

Query: 471 LKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS 530
             K+ GGL +R L++FN+AL++K  WR+L        RV  A+Y  + R L+    S SS
Sbjct: 301 DPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSS 360

Query: 531 W-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFN--RRFARLFDL 587
           + WK    I  G      G     +  + G+G+N   W D WL   P N  R      D 
Sbjct: 361 YAWK---SILHGTKLISRG-----LKYIAGNGNNIQLWKDNWL---PLNPPRPPVGTCDS 409

Query: 588 TTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEE--CRSLLDNVRLRLNVL-------- 637
             +++  V+D+   G                W E+  C+ +  N    +  +        
Sbjct: 410 IYSQL-KVSDLLIEG---------------RWNEDLLCKLIHQNDIPHIRAIRPSITGAN 453

Query: 638 DRWQWDPDTIDVYTVRGVYQIL-------------TTSVSNTIVKTDELVWHKQVPLN*V 684
           D   W       Y+V+  Y +L                VS   V T+  +W +  P   +
Sbjct: 454 DAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQTVFTN--IWKQNAPPK-I 510

Query: 685 SIVAWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIA-ESASHLFLHCEV 734
               WR   + LPT  NL+RR  +  T +TC   CG A E  +HL   C V
Sbjct: 511 KHFWWRSAHNALPTAGNLKRRRLI--TDDTC-QRCGEASEDVNHLLFQCRV 558


>UniRef100_Q75GM6 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 1614

 Score =  231 bits (588), Expect = 8e-59
 Identities = 134/412 (32%), Positives = 211/412 (50%), Gaps = 10/412 (2%)

Query: 174  ILDGILIANEVVDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIKE 233
            IL+G +I +EV+ E  +   E ++ K+DFEKAYD V   +L  VM +  FP  W  WIK 
Sbjct: 1176 ILEGCVIIHEVLHEMNRKNLEGIILKIDFEKAYDKVSWDFLIEVMVRKGFPSKWVNWIKT 1235

Query: 234  CISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGYV 293
            C+      I +NG  TD F   RGLRQGDPLSP LF + ++ L  ++ S     +  G V
Sbjct: 1236 CVMGGRVCININGERTDFFRTFRGLRQGDPLSPLLFNLISDALAAMLDSAKREGVLSGLV 1295

Query: 294  VGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLVGVNIG 353
                    ++HLQ+ADDT+L        + A + +L  F EM+ LKVN++KS +  + + 
Sbjct: 1296 PDIFPG-GITHLQYADDTVLFVANDDKQIVATKFILYCFEEMAVLKVNYHKSEIFTLGLS 1354

Query: 354  ESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFGG 413
            ++     A + NC VG+    YLGL IG D      ++ +   ++ RL+ W +  LS  G
Sbjct: 1355 DNDTNRVAMMFNCPVGQFPMKYLGLPIGPDKILNLGFDFLGQKLEKRLNSWGN-NLSHAG 1413

Query: 414  RLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLKK 473
            R V + + L+S+P YA+ F++ P G+     S+  +++W  +    K   + W  +   K
Sbjct: 1414 RAVQINTCLSSIPSYAMCFYQLPEGVHQKFGSIRGRYYWARNRLKGKYHMVKWEDLAFPK 1473

Query: 474  EFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSSWWK 533
            ++GGLG    R  N AL++KW  ++  +       +L  +Y ++    +   R  S +WK
Sbjct: 1474 DYGGLGFTETRRMNTALLAKWIMKIESEDDSLCIELLRRKYLQDGGFFQCKERYASQFWK 1533

Query: 534  EVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLF 585
             +  I+  +        +G V + VGDGS+  FW D W G  P    F  +F
Sbjct: 1534 GLLNIRRWLS-------LGSVWQ-VGDGSHISFWRDVWWGQCPLRTLFPAIF 1577


>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  229 bits (584), Expect = 2e-58
 Identities = 168/549 (30%), Positives = 264/549 (47%), Gaps = 35/549 (6%)

Query: 174  ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
            I D ++IA+EV+   K  K   K  +  K D  KAYD V+  +L+  M+   F   W  W
Sbjct: 702  INDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGW 761

Query: 231  IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
            I   + +   S+L+NGSP    +  RG+RQGDPLSP+LF++  + L+ L+     +   +
Sbjct: 762  IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 821

Query: 291  GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
            G  +G + +  ++HLQFADD+L   + +  N +AL+ V  ++   SG K+N  KS++  G
Sbjct: 822  GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFG 880

Query: 350  VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
              +  S   +   +L          YLGL      +K   +E ++  +K R S W + FL
Sbjct: 881  SRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFL 940

Query: 410  SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
            S  G+ ++LKSV  ++PVYA+S FK P GI+S IESL   F+W  + + R I W+AW  +
Sbjct: 941  SPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRL 1000

Query: 470  CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
               K+ GGLG R L +FN AL++K  WRL+      + RV+ ARY ++   L+   R   
Sbjct: 1001 QYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQ 1060

Query: 530  SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
            S+ W   A + DG+    +G        L+GDG N     D  +   P       L    
Sbjct: 1061 SYGW---ASLLDGIALLKKG-----TRHLIGDGQNIRIGLDNIVDSHPPR----PLNTEE 1108

Query: 589  TNKMCTVADMYRLGWEEGGDAWVW--RRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDPD 645
            T K  T+ +++    E  G  + W   +     ++     +  + L +    D+  W+ +
Sbjct: 1109 TYKEMTINNLF----ERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1164

Query: 646  TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
            T   YTVR  Y +LT   S  I         +     +W+  + +  +    WR L   L
Sbjct: 1165 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPI-MPKLKHFLWRALSQAL 1223

Query: 697  PTKTNLQRR 705
             T   L  R
Sbjct: 1224 ATTERLTTR 1232


>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  229 bits (583), Expect = 3e-58
 Identities = 168/549 (30%), Positives = 263/549 (47%), Gaps = 35/549 (6%)

Query: 174  ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
            I D ++IA+EV+   K  K   K  +  K D  KAYD V+  +L+  M+   F   W  W
Sbjct: 928  INDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGW 987

Query: 231  IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
            I   + +   S+L+NGSP    +  RG+RQGDPLSP+LF++  + L+ L+     +   +
Sbjct: 988  IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 1047

Query: 291  GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
            G  +G + +  ++HLQFADD+L   + +  N +AL+ V  ++   SG K+N  KS++  G
Sbjct: 1048 GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFG 1106

Query: 350  VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
              +  S       +L          YLGL      +K   +E ++  +K R S W + FL
Sbjct: 1107 SRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFL 1166

Query: 410  SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
            S  G+ ++LKSV  ++PVYA+S FK P GI+S IESL   F+W  + + R I W+AW  +
Sbjct: 1167 SPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRL 1226

Query: 470  CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
               K+ GGLG R L +FN AL++K  WRL+      + RV+ ARY ++   L+   R   
Sbjct: 1227 QYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQ 1286

Query: 530  SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
            S+ W   A + DG+    +G        L+GDG N     D  +   P       L    
Sbjct: 1287 SYGW---ASLLDGIALLKKG-----TRHLIGDGQNIRIGLDNIVDSHPPR----PLNTEE 1334

Query: 589  TNKMCTVADMYRLGWEEGGDAWVW--RRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDPD 645
            T K  T+ +++    E  G  + W   +     ++     +  + L +    D+  W+ +
Sbjct: 1335 TYKEMTINNLF----ERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1390

Query: 646  TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
            T   YTVR  Y +LT   S  I         +     +W+  + +  +    WR L   L
Sbjct: 1391 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPI-MPKLKHFLWRALSQAL 1449

Query: 697  PTKTNLQRR 705
             T   L  R
Sbjct: 1450 ATTERLTTR 1458


>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  228 bits (581), Expect = 5e-58
 Identities = 170/575 (29%), Positives = 271/575 (46%), Gaps = 37/575 (6%)

Query: 174 ILDGILIANEVVDEAKKT---KKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
           I D ILIA E+    +     K + +  K D  KAYD V+  +++A+++KM F   W  W
Sbjct: 330 ISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISW 389

Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
           I  CI+T    +L+NG P       RGLRQGDPLSP+LF++  E L   ++     NL  
Sbjct: 390 IMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLIT 449

Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLL-VG 349
           G  V A+ S  VSHL FADD+L   + +      +  +L  +  +SG ++NF+KS +  G
Sbjct: 450 GIKV-ATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFG 508

Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGL--SIGGDPRKLAFWEPVVSTIKTRLSGWQSC 407
             + +S   +   +L       +  YLGL  S+GG   K+  +  V   +++R++GW + 
Sbjct: 509 HKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSF--VRDRLQSRINGWSAK 566

Query: 408 FLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWS 467
           FLS GG+ V++KSV  +LP Y +S F+ P  I S + S   KF+W  + D+R + W+AW 
Sbjct: 567 FLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWD 626

Query: 468 SVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLE-VGGR 526
            +C  K  GGLG R + +FN AL++K  WRL+      + +V   RY  ++  L+ +   
Sbjct: 627 KLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSY 686

Query: 527 SVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL-GDVPFNRRFARLF 585
           S S  W+ +   +  V       + G + K VG G++   W D W+    P   ++    
Sbjct: 687 SPSYGWRSMISARSLV-------YKGLI-KRVGSGASISVWNDPWIPAQFPRPAKYGGSI 738

Query: 586 DLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDP 644
              + K+ ++ D          + W        ++ E   L+  + +   N+ D   W  
Sbjct: 739 VDPSLKVKSLID-------SRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHF 791

Query: 645 DTIDVYTVRGVYQIL-------TTSVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRLP 697
                YTV+  Y          TT +   +      +W  Q P   +    W++L   +P
Sbjct: 792 TKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPK-LRHFLWQILSGCVP 850

Query: 698 TKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
              NL++R  L      CVS     ES +H    C
Sbjct: 851 VSENLRKRGIL--CDKGCVSCGASEESINHTLFQC 883


>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1344

 Score =  228 bits (581), Expect = 5e-58
 Identities = 165/584 (28%), Positives = 279/584 (47%), Gaps = 53/584 (9%)

Query: 174  ILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
            I D IL+A+E++   +   +  KE + FK D  KAYD V+  +L+ +M  + F   W  W
Sbjct: 524  ISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISW 583

Query: 231  IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
            I  C+++ + S+L+NG P       RG+RQGDPLSP LF++  E L  ++    +     
Sbjct: 584  IMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKIT 643

Query: 291  GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
            G +      V V+HL FADDTLL+ + +      L   L+ + ++SG  +N NKS +  G
Sbjct: 644  G-IQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFG 702

Query: 350  VNIG---ESWLLEAASV-LNCKVGKILFLYLGLS--IGGDPRKLAFWEPVVSTIKTRLSG 403
             N+    + W+   + + L    GK    YLGL   + G  R L  +  +   +++RL+G
Sbjct: 703  KNVDIQIKDWIKSRSGISLEGGTGK----YLGLPECLSGSKRDLFGF--IKEKLQSRLTG 756

Query: 404  WQSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISW 463
            W +  LS GG+ VLLKS+  +LPVY +S FK P  +   + ++   F+W   +  RKI W
Sbjct: 757  WYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHW 816

Query: 464  IAWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV 523
            ++W  + L K+ GG G + L+ FN AL++K  WR+L ++G  + RV  +RY   +  L  
Sbjct: 817  LSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSA 876

Query: 524  GGRSVSSW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGD----VPFN 578
               S  S+ W+ +   ++          +  +  ++G+G  T  W D+WL D     P N
Sbjct: 877  TRGSRPSYAWRSILFGRE--------LLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLN 928

Query: 579  RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLD 638
            RR     DL   K+  + D     W          R L+ W++    ++   R      D
Sbjct: 929  RRRFINVDL---KVSQLIDPTSRNWNLN-----MLRDLFPWKDV--EIILKQRPLFFKED 978

Query: 639  RWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDEL----------VWHKQVPLN*VSIVA 688
             + W      +Y+V+  Y+ L+  V + + +  ++          +W+       + I  
Sbjct: 979  SFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPK-IRIFL 1037

Query: 689  WRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
            W+ L   +P +  L+ R     + + C+      E+ +H+   C
Sbjct: 1038 WKALHGAIPVEDRLRTRGI--RSDDGCLMCDTENETINHILFEC 1079


>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
          Length = 851

 Score =  227 bits (578), Expect = 1e-57
 Identities = 167/549 (30%), Positives = 267/549 (48%), Gaps = 35/549 (6%)

Query: 174 ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
           I D ++IA+E++   K  K   K  +  K D  KAYD V+  +L+  M+   F   W  W
Sbjct: 167 INDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGW 226

Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
           I   + +   S+L+NGSP    S  RG+RQGDPLSP+LF++  + L+ L+K    +   +
Sbjct: 227 IMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIR 286

Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
           G  +G + +  ++HLQFADD+L   + +  N +AL+ V  ++   SG K+N  KSL+  G
Sbjct: 287 GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFG 345

Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
             +  S      ++LN         YLGL      +K   +  ++  +K R + W + FL
Sbjct: 346 SRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFL 405

Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
           S  G+ +LLKSV  ++PVYA+S FK P GI+S IESL   F+W  + + R I W+AW  +
Sbjct: 406 SPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRL 465

Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
              K+ GGLG R L +FN AL++K  WR++      + RV+ ARY ++   ++   RS  
Sbjct: 466 QYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQ 525

Query: 530 SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
           S+ W   + +  G+    +G        ++GDG       D  +   P          L 
Sbjct: 526 SYGW---SSLLSGIALLRKG-----TRYVIGDGKTIRLGIDNVVDSHPPR-------PLL 570

Query: 589 TNKMCTVADMYRLGWEEGGDAWVW-RRRLWAW-EEECRSLLDNVRLRL-NVLDRWQWDPD 645
           T++      +  L ++  G +  W   +L  + ++     +  + L   +  DR  W  +
Sbjct: 571 TDEQHNGLSLDNL-FQHRGHSRCWDNAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYN 629

Query: 646 TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
           +   YTVR  Y + T   SNTI         V     +W+  + +  +    WR+L   L
Sbjct: 630 STGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLKTKIWNLPI-MPKLKHFLWRILSKAL 688

Query: 697 PTKTNLQRR 705
           PT   L  R
Sbjct: 689 PTTDRLTTR 697


>UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  225 bits (574), Expect = 3e-57
 Identities = 167/565 (29%), Positives = 261/565 (45%), Gaps = 57/565 (10%)

Query: 169  VKDMQILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
            V +  I D IL+A+E+V   K   +   E +  K D  KAYD V+  YL +++  + F L
Sbjct: 507  VSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHL 566

Query: 226  LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
             W  WI  C+S+ T S+L+N  P     L RGLRQGDPLSPFLF++  EGL  L+     
Sbjct: 567  KWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQW 626

Query: 286  NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
                +G +  + N  +V HL FADD+L L + S      L+ +L ++   +G  +N NKS
Sbjct: 627  EGALEG-IQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINLNKS 685

Query: 346  LLV-GVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGW 404
             +  G  + E       + L          YLGL       K+     +   +K +L  W
Sbjct: 686  SITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKLDVW 745

Query: 405  QSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWI 464
             +  LS GG+ VLLKSV  ++PV+A+S FK P      +ES    F+W   + +RKI W 
Sbjct: 746  FTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIHWQ 805

Query: 465  AWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVG 524
            +W  +CL K+ GGLG R ++ FN AL++K  WRLL        R+L +RY +    L+  
Sbjct: 806  SWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAA 865

Query: 525  -GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFAR 583
              +  S  W+ +   ++ + +         + K VGDG++   W D W+ D  F   + +
Sbjct: 866  LSQRPSFGWRSILFGRELLSKG--------LQKRVGDGASLFVWIDPWIDDNGFRAPWRK 917

Query: 584  --LFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLL----DNVRLR---- 633
              ++D+T      +                   R   W+EE    L    D +R++    
Sbjct: 918  NLIYDVTLKVKALL-----------------NPRTGFWDEEVLHDLFLPEDILRIKAIKP 960

Query: 634  -LNVLDRWQWDPDTIDVYTVRGVYQILTTSVSNTI------------VKTDELVWHKQVP 680
             ++  D + W  +    ++V+  Y +   + S  +            +KT   VW+ Q  
Sbjct: 961  VISQADFFVWKLNKSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQ--VWNLQTD 1018

Query: 681  LN*VSIVAWRLLKDRLPTKTNLQRR 705
               + I  W++L   LP   NL  R
Sbjct: 1019 PK-IKIFLWKVLSGILPVAENLNGR 1042


>UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 1652

 Score =  224 bits (572), Expect = 5e-57
 Identities = 138/397 (34%), Positives = 209/397 (51%), Gaps = 11/397 (2%)

Query: 174  ILDGILIANEVVDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIKE 233
            I++G++I +E + E  K KK  ++ K+DFEKAYD VD  +L   ++   F   W  WI  
Sbjct: 1265 IMEGVVILHETLHELHKKKKNGVILKLDFEKAYDKVDWKFLQQSLRMKGFSSKWCDWIDS 1324

Query: 234  CISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGYV 293
             +   + ++ VN      F   +GLRQGDPLSP LF +  + L +L++   +   FKG V
Sbjct: 1325 IVRGGSVAVKVNDEIGSYFQTRKGLRQGDPLSPILFNLVVDMLAILIQRAKDQGRFKGVV 1384

Query: 294  VGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLVGVNIG 353
                ++ + S LQ+ADDT+L  +      R L+ VL+ F ++S LK+NF KS L      
Sbjct: 1385 PHLVDNGL-SILQYADDTILFMDHDLDEARDLKLVLSTFEKLSSLKINFYKSELFCYGKA 1443

Query: 354  ESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFGG 413
            +    E   +  C      F YLG+ +         W+ V   I+ +LS W+  FLS GG
Sbjct: 1444 KDVEHEYVKLFGCDTEDYPFKYLGIRMHHKRINNKDWQGVEERIQKKLSSWKGKFLSVGG 1503

Query: 414  RLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLKK 473
            RLVL+ SVL++L ++ LSFF+ P GI+  ++   ++FFW+  E  +K     WS +C  K
Sbjct: 1504 RLVLINSVLSNLAIFMLSFFEIPKGILKKLDYYRSRFFWQCDEHKKKYRLARWSVLCKPK 1563

Query: 474  EFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGG-RSVSSWW 532
            E GGLG++ L   N  L+SKW ++ LI+  G W  +L  +Y  +    +V      S +W
Sbjct: 1564 ECGGLGIQNLEIQNKCLLSKWLYK-LINEEGVWQDILRNKYLTKKTITQVEKCPGDSHFW 1622

Query: 533  KEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFD 569
              +  ++D        +F G   K VGDGS   FW D
Sbjct: 1623 AGLMGVRD-------VFFKGGAFK-VGDGSQIRFWED 1651


>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  224 bits (570), Expect = 9e-57
 Identities = 167/596 (28%), Positives = 272/596 (45%), Gaps = 59/596 (9%)

Query: 169  VKDMQILDGILIANEVV---DEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
            VK   I D ILIA+E++       K  +E +  K D  KAYD V+  +L+  M+ + F  
Sbjct: 541  VKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFAD 600

Query: 226  LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
             W + I EC+ +    +L+NG+P  E    RGLRQGDPLSP+LF+I  E L  +++S  +
Sbjct: 601  HWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQ 660

Query: 286  NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
             N   G  V A  +  +SHL FADD++   + +   +  +  ++  ++  SG +VN+ KS
Sbjct: 661  KNQITGLKV-ARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKS 719

Query: 346  -LLVGVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGW 404
             +  G +I E         L  +      +YLGL       K+A    +   +  ++ GW
Sbjct: 720  SIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGW 779

Query: 405  QSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWI 464
            QS FLS GG+ +LLK+V  +LP Y +S FK P  I   IES+  +F+W+  ++ R + W 
Sbjct: 780  QSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWK 839

Query: 465  AWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLE-- 522
            AW  +   K  GGLG + +  FN+AL+ K  WR++ ++     +V  +RY  ++  L   
Sbjct: 840  AWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAP 899

Query: 523  VGGRSVSSW---WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFN- 578
            +G R   +W   ++    IK G            +  ++G+G     W D W+G  P   
Sbjct: 900  LGSRPSFAWKSIYEAQVLIKQG------------IRAVIGNGETINVWTDPWIGAKPAKA 947

Query: 579  ----RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRL 634
                +R   +     N +  V D+      +G D        W W        DN +  +
Sbjct: 948  AQAVKRSHLVSQYAANSIHVVKDLL---LPDGRD--------WNWNLVSLLFPDNTQENI 996

Query: 635  NVL--------DRWQWDPDTIDVYTVRGVYQILTTSVSN----------TIVKTDELVWH 676
              L        DR+ W+      Y+V+  Y ++T  ++           ++    + +W 
Sbjct: 997  LALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWK 1056

Query: 677  KQVPLN*VSIVAWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
              VP   +    WR + + L   +NL  R    A   +CV      E+ +HL   C
Sbjct: 1057 LDVPPK-IHHFLWRCVNNCLSVASNLAYRHL--AREKSCVRCPSHGETVNHLLFKC 1109


>UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]
          Length = 1509

 Score =  223 bits (569), Expect = 1e-56
 Identities = 173/586 (29%), Positives = 270/586 (45%), Gaps = 52/586 (8%)

Query: 174  ILDGILIANEVVDEAKKTKKELL---LFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
            I D ILIA E+    +  +   +    FK+D  KAYD V+  +L  +M K+ F   W   
Sbjct: 747  ISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNL 806

Query: 231  IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
            I +C+ST T  I VNG  ++ FS  RGLRQGDPLSP+LF++ AEG + L+    E     
Sbjct: 807  IMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLH 866

Query: 291  GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS-LLVG 349
            G  +    +  VSHL FADD+L+L   +    + L+ +L ++ E SG  +N +KS ++  
Sbjct: 867  GIRI-CQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFS 925

Query: 350  VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
             N          + LN +       YLGL +     +   +  +   I  R+ GW+   L
Sbjct: 926  PNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLL 985

Query: 410  SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
            S  G+ +L+K+V   +P +A+  F+    +   I  +  K++W   E + K+ W++W+ +
Sbjct: 986  SRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKL 1045

Query: 470  CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARY---GEEARRLEVGGR 526
             L K  GGLG R +  FNLA+++K  WRL+ D      RVL A+Y   G+  R  +    
Sbjct: 1046 TLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTS-- 1103

Query: 527  SVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL----GDVPFNRRFA 582
            +VS  W+ + K   G+     G     +   VGDGS    W D W+       P   R A
Sbjct: 1104 NVSYTWRSIQK---GLRVLQNG-----MIWRVGDGSKINIWADPWIPRGWSRKPMTPRGA 1155

Query: 583  RLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQW 642
             L      K+  + D Y   W+E   +  +      WEE+  + + ++ + + + D   W
Sbjct: 1156 NL----VTKVEELIDPYTGTWDEDLLSQTF------WEEDV-AAIKSIPVHVEMEDVLAW 1204

Query: 643  DPDTIDVYTVRGVYQIL-----------TTSVSNTIVKTDEL---VWHKQVPLN*VSIVA 688
              D    +TV+  Y++               VSN     D+    +W   VP   +    
Sbjct: 1205 HFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVP-GKIKHFL 1263

Query: 689  WRLLKDRLPTKTNLQRRDCLQATVNTCVSGCG-IAESASHLFLHCE 733
            WR+  + L  + NL  R      V+T    CG   E A HLF  C+
Sbjct: 1264 WRMCHNTLALRANLHHRG---MDVDTRCVMCGRYNEDAGHLFFKCK 1306


>UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  223 bits (567), Expect = 2e-56
 Identities = 142/427 (33%), Positives = 216/427 (50%), Gaps = 16/427 (3%)

Query: 169 VKDMQILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
           V +  I D IL+A+E+V   K   +   E +  K D  KAYD V+  YL +++  + F L
Sbjct: 504 VSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHL 563

Query: 226 LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
            W  WI  C+S+ T S+L+N  P     L RGLRQGDPLSPFLF++  EGL  L+     
Sbjct: 564 KWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQW 623

Query: 286 NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
               +G +  + N  +V HL FADD+L L + S      L+ +L ++   +G  +N NKS
Sbjct: 624 EGALEG-IQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINLNKS 682

Query: 346 LLV-GVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGW 404
            +  G  + E       + L          YLGL       K+     +   +K +L  W
Sbjct: 683 SITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKLDVW 742

Query: 405 QSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWI 464
            +  LS GG+ VLLKSV  ++PV+A+S FK P      +ES    F+W   + +RKI W 
Sbjct: 743 FTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIHWQ 802

Query: 465 AWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVG 524
           +W  +CL K+ GGLG R ++ FN AL++K  WRLL        R+L +RY +    L+  
Sbjct: 803 SWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAA 862

Query: 525 -GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFAR 583
             +  S  W+ +   ++ + +         + K VGDG++   W D W+ D  F   + +
Sbjct: 863 LSQRPSFGWRSILFGRELLSKG--------LQKRVGDGASLFVWIDPWIDDNGFRAPWRK 914

Query: 584 --LFDLT 588
             ++D+T
Sbjct: 915 NLIYDVT 921


>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score =  221 bits (564), Expect = 5e-56
 Identities = 160/589 (27%), Positives = 269/589 (45%), Gaps = 53/589 (8%)

Query: 169 VKDMQILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
           V +  + D I++A+E+V   +   K  K+ ++FK D  KAYD V+  +L  ++  + F  
Sbjct: 270 VAERLVSDNIILAHEIVHNLRTNEKISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNS 329

Query: 226 LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
            W  W+  C+S+ + S+L+NG P    + HRGLRQGDPLSPFLF++  E L  ++    +
Sbjct: 330 TWINWMMACVSSVSYSVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEK 389

Query: 286 NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
                G     +    V+HL FADDTLL+ + S      +   L+ +  +SG  +N  KS
Sbjct: 390 IGKISGIQFNGTGP-SVNHLLFADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKS 448

Query: 346 LLV-GVNIGE---SWLLEAASV-LNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTR 400
            +  G  + E    W++  + +      GK    YLGL       K   +  +   +++R
Sbjct: 449 AITFGAKVNEETKQWIMNRSGIQTEGGTGK----YLGLPECFQGSKQVLFGFIKEKLQSR 504

Query: 401 LSGWQSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRK 460
           LSGW +  LS GG+ +LLKS+  + PVYA++ F+    + + + S+   F+W   +D +K
Sbjct: 505 LSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKK 564

Query: 461 ISWIAWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARR 520
           I WI    + L K  GG G + L+ FN AL++K   RL  D      ++L +RY   +  
Sbjct: 565 IHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDF 624

Query: 521 LE-VGGRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL-GDVPFN 578
           L    G   S  W+ +   ++          V  + K++G+G NT  W D W+  D P  
Sbjct: 625 LSATKGTRPSYAWQSILYGRE--------LLVSGLKKIIGNGENTYVWMDNWIFDDKPRR 676

Query: 579 RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLD 638
               ++      K+  + D +   W          R L+ W+E    ++   R   +  D
Sbjct: 677 PESLQIMVDIQLKVSQLIDPFSRNWNLN-----MLRDLFPWKE--IQIICQQRPMASRQD 729

Query: 639 RWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDE----------LVWH-KQVPLN*VSIV 687
            + W      +YTV+  Y + +  V   + K  E           +W+    P   + + 
Sbjct: 730 SFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWNLNSAPK--IKVF 787

Query: 688 AWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIA----ESASHLFLHC 732
            W++LK  +  +  L+ R  L         GC +     E+ +H+   C
Sbjct: 788 LWKVLKGAVAVEDRLRTRGVL------IEDGCSMCPEKNETLNHILFQC 830


>UniRef100_Q9SLE9 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score =  221 bits (562), Expect = 8e-56
 Identities = 163/581 (28%), Positives = 267/581 (45%), Gaps = 47/581 (8%)

Query: 174  ILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
            I D ILIA+E+V   +   K  KE ++FK D  KAYD V+  +L  ++  + F   W  W
Sbjct: 498  ISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEILVALGFNDKWISW 557

Query: 231  IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
            I  C+++ T S+L+NG      +  RG+RQGDP+SPFLF++  E L  +++    +    
Sbjct: 558  IMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISPFLFVLCTEALIHILQQAENSKKVS 617

Query: 291  GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
            G     S   V +HL F DDT L+   + ++   +   L+ +  +SG  +N  KS +  G
Sbjct: 618  GIQFNGSGPSV-NHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISGQLINVEKSSITFG 676

Query: 350  VNIGES---WLLEAASV-LNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQ 405
            V + E    W+   + + L    GK    YLGL       K   +  +   +++ LSGW 
Sbjct: 677  VKVDEDTKRWIKNRSGIHLEGGTGK----YLGLPENLSGSKQDLFGYIKEKLQSHLSGWY 732

Query: 406  SCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIA 465
               LS GG+ +LLKS+  +LPVY ++ F+ P G+ + + S+   F+W   E + KI WI 
Sbjct: 733  DKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSNKIHWIG 792

Query: 466  WSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV-G 524
               + L K  GG G + L+ FN AL++K  WRL  D      ++  +RY      L    
Sbjct: 793  GKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQ 852

Query: 525  GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARL 584
            G   S  W+ +   ++ +         G + +L+G+G  T  W D+WL D   +RR   L
Sbjct: 853  GTRPSYTWRSILYGRELLN--------GGLKRLIGNGEQTNVWIDKWLFD-GHSRRPMNL 903

Query: 585  FDLTT--NKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQW 642
              L     K+  + D     W         ++    + E+   L+ + R  ++  D + W
Sbjct: 904  HSLMNIHMKVSHLIDPLTRNWN-------LKKLTELFHEKDVQLIMHQRPLISSEDSYCW 956

Query: 643  DPDTIDVYTVRGVYQILTTSVSNTIVKTDEL----------VWH-KQVPLN*VSIVAWRL 691
                  +YTV+  Y+  +      + K  ++          VW  + VP   + +  W+ 
Sbjct: 957  AGTNNGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPK--IKVFMWKA 1014

Query: 692  LKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
            LK  L  +  L+ R     T + C+      E+ +HL   C
Sbjct: 1015 LKGALAVEDRLRSRGI--RTADGCLFCKEEIETINHLLFQC 1053


>UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]
          Length = 1662

 Score =  218 bits (554), Expect = 7e-55
 Identities = 139/401 (34%), Positives = 214/401 (52%), Gaps = 20/401 (4%)

Query: 176  DGILIANEVVDEAKKTKK---ELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
            D ++IA+E++   K  K+     +  K D  KAYD V+  +L+  M+   F   W KWI 
Sbjct: 930  DNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIM 989

Query: 233  ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
              + +   S+LVNG P       RG+RQGDPLSP+LF++ A+ LN L+K+ V     +G 
Sbjct: 990  GAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGI 1049

Query: 293  VVGASNSVV-VSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-GV 350
             +G  N V  V+HLQFADD+L   + +  N +AL+ V  ++   SG K+N +KS++  G 
Sbjct: 1050 RIG--NGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGS 1107

Query: 351  NIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLS 410
             +  +      ++L  +       YLGL      +K   +  ++  +K R S W + +LS
Sbjct: 1108 RVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLS 1167

Query: 411  FGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVC 470
              G+ ++LKSV  S+PVYA+S FK P  I+S IE+L   F+W  +   R+I WIAW  + 
Sbjct: 1168 PAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQ 1227

Query: 471  LKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS 530
              K+ GGLG R L +FN AL++K  WR++ +    + R++ ARY  E   L+   +   S
Sbjct: 1228 YSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQS 1287

Query: 531  W-WKEVAK----IKDG----VGEDDEG----WFVGKVSKLV 558
            + W  +      IK G    VG+   G    W    +S+LV
Sbjct: 1288 YGWTSMLAGLDVIKKGSRFIVGDGKTGSYRYWNAHLISQLV 1328


>UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis thaliana]
          Length = 1294

 Score =  217 bits (553), Expect = 9e-55
 Identities = 128/361 (35%), Positives = 199/361 (54%), Gaps = 7/361 (1%)

Query: 176  DGILIANEVVDEAKKTKK---ELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
            D ++IA+E++   K  K+     +  K D  KAYD V+  +L+  M+   F   W KWI 
Sbjct: 910  DNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIM 969

Query: 233  ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
              + +   S+LVNG P       RG+RQGDPLSP+LF++ A+ LN L+K+ V     +G 
Sbjct: 970  GAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGI 1029

Query: 293  VVGASNSVV-VSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-GV 350
             +G  N V  V+HLQFADD+L   + +  N +AL+ V  ++   SG K+N +KS++  G 
Sbjct: 1030 RIG--NGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGS 1087

Query: 351  NIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLS 410
             +  +      ++L  +       YLGL      +K   +  ++  +K R S W + +LS
Sbjct: 1088 RVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLS 1147

Query: 411  FGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVC 470
              G+ ++LKSV  S+PVYA+S FK P  I+S IE+L   F+W  +   R+I WIAW  + 
Sbjct: 1148 PAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQ 1207

Query: 471  LKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS 530
              K+ GGLG R L +FN AL++K  WR++ +    + R++ ARY  E   L+   +   S
Sbjct: 1208 YSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQS 1267

Query: 531  W 531
            +
Sbjct: 1268 Y 1268


>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  216 bits (550), Expect = 2e-54
 Identities = 172/575 (29%), Positives = 256/575 (43%), Gaps = 47/575 (8%)

Query: 175 LDGILIANEVVDEA--KKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
           +D I++  E V     KK +K  +L K+D EKAYD V   +L   ++       W   I 
Sbjct: 411 IDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIM 470

Query: 233 ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
             ++  + S+L NG  TD F   RGLRQGDPLSP+LF++  E L  L+++ V    +K  
Sbjct: 471 AGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPI 530

Query: 293 VVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV---G 349
            V    S + SH+ FADD +L  E S A +R +R VL  F E SG KV+  KS +     
Sbjct: 531 AVSCGGSKL-SHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHN 589

Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
           V+     L+   S + C   K L  YLG+ I         +  V+  +  RL+GW+   L
Sbjct: 590 VSREMEQLISEESGIGCT--KELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSL 647

Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
           S  GR+ L K+VL+S+PV+ +S    P   +  ++     F W  + + +K   ++W  +
Sbjct: 648 SLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKI 707

Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
           C  K  GG+G+R  R+ N AL++K  WRLL D+   W RV+  +Y       +VGG   +
Sbjct: 708 CKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-------KVGGVQDT 760

Query: 530 SW----------WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNR 579
           SW          W+ VA     V     GW       + GDG    FW DRWL   P   
Sbjct: 761 SWLKPQPRWSSTWRSVAVGLREVVVKGVGW-------VPGDGCTIRFWLDRWLLQEPLVE 813

Query: 580 RFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLD-NVRLRLNVLD 638
               +  +   +   VA  Y   W  G    +    L+  E   R LL   V++ L   D
Sbjct: 814 LGTDM--IPEGERIKVAADY---WLPGSGWNLEILGLYLPETVKRRLLSVVVQVFLGNGD 868

Query: 639 RWQWDPDTIDVYTVRGVYQILTTSVSN--TIVKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
              W       +TVR  Y +L   V +   +      +W K +    V +  W + ++ +
Sbjct: 869 EISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIW-KLITPERVRVFIWLVSQNVI 927

Query: 697 PTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLH 731
            T     RR   +  +      C +   A    LH
Sbjct: 928 MTNVERVRRHLSENAI------CSVCNGAEETILH 956


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.335    0.146    0.498 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,224,516,488
Number of Sequences: 2790947
Number of extensions: 51288755
Number of successful extensions: 164119
Number of sequences better than 10.0: 836
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 162220
Number of HSP's gapped (non-prelim): 1255
length of query: 738
length of database: 848,049,833
effective HSP length: 135
effective length of query: 603
effective length of database: 471,271,988
effective search space: 284177008764
effective search space used: 284177008764
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 79 (35.0 bits)