BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149197.4 - phase: 0
(204 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6L3X8 Hypothetical protein [Solanum demissum] 83 5e-15
UniRef100_O65407 Hypothetical protein F18E5.40 [Arabidopsis thal... 74 3e-12
UniRef100_Q6L3U7 Putative RNase H domain containing protein [Sol... 66 6e-10
UniRef100_Q5XWN7 Hypothetical protein [Solanum tuberosum] 66 6e-10
UniRef100_Q655G6 Hypothetical protein P0009H10.11 [Oryza sativa] 63 5e-09
UniRef100_Q6K204 Hypothetical protein B1469H02.35 [Oryza sativa] 62 9e-09
UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like... 62 1e-08
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip... 60 5e-08
UniRef100_Q9SI81 F23N19.5 [Arabidopsis thaliana] 58 2e-07
UniRef100_Q5Z8I2 Hypothetical protein P0622F03.7 [Oryza sativa] 58 2e-07
UniRef100_Q9ZUY7 Putative reverse transcriptase [Arabidopsis tha... 58 2e-07
UniRef100_Q8H8C0 Hypothetical protein OJ1134F05.9 [Oryza sativa] 58 2e-07
UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcrip... 57 2e-07
UniRef100_O80790 Putative non-LTR retroelement reverse transcrip... 57 3e-07
UniRef100_Q9LNS0 F1L3.4 [Arabidopsis thaliana] 53 6e-06
UniRef100_Q9LQJ0 F28G4.15 protein [Arabidopsis thaliana] 53 6e-06
UniRef100_Q9SHY0 F1E22.12 [Arabidopsis thaliana] 53 6e-06
UniRef100_Q9LDL8 Hypothetical protein AT4g08830 [Arabidopsis tha... 51 2e-05
UniRef100_Q9FXC8 F12A21.24 [Arabidopsis thaliana] 49 6e-05
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 49 6e-05
>UniRef100_Q6L3X8 Hypothetical protein [Solanum demissum]
Length = 1155
Score = 82.8 bits (203), Expect = 5e-15
Identities = 57/185 (30%), Positives = 89/185 (47%), Gaps = 6/185 (3%)
Query: 19 ILKAFNVSIHPPRSMLVKEVLWSPPIHSWIKGNCVGAFASGKAACGGIFRNRLGQFLGCF 78
I + F+VSI+ V V W P + K N G+ +G+ GGI RN LGQ + F
Sbjct: 974 INQIFDVSINHKN---VIRVNWIKPPTMFAKLNTDGSCVNGRCGGGGILRNALGQVIMAF 1030
Query: 79 AEGLSYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWN 138
L G S +AE + ++ + N ETDS+L+ +A + +PW++
Sbjct: 1031 TIKLGEGTSSWAEAMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVK 1090
Query: 139 NCQIIISNMNFLASHIYREGNSCADVLANIGLTLD---TYVYYYSLPLQVRSDYVKNRLG 195
Q ++ F+ +H RE N AD LA+I L+ D + Y +LP V+ +R+
Sbjct: 1091 KIQKMVEEHGFIINHCLREANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMN 1150
Query: 196 WPSFR 200
P+FR
Sbjct: 1151 LPTFR 1155
>UniRef100_O65407 Hypothetical protein F18E5.40 [Arabidopsis thaliana]
Length = 229
Score = 73.6 bits (179), Expect = 3e-12
Identities = 42/136 (30%), Positives = 70/136 (50%), Gaps = 3/136 (2%)
Query: 37 EVLWSPPIHSWIKGNCVGAFA-SGKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGA 95
+V+W P + IK N G+ G+A+ GG+FRN +FL ++E + S AE
Sbjct: 60 KVVWKKPENGRIKLNFDGSRGREGQASIGGVFRNHKAEFLLGYSESIGEATSTMAEFAAL 119
Query: 96 MRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRW-NNCQIIISNM-NFLASH 153
R +E A + WLE D+ +++ + + N+ N ++++ + N + SH
Sbjct: 120 KRGLELALENGLTDLWLEGDAKIIMDIISRRGRLRCEKTNKHVNYIKVVMPELNNCVLSH 179
Query: 154 IYREGNSCADVLANIG 169
+YREGN AD LA +G
Sbjct: 180 VYREGNRVADKLAKLG 195
>UniRef100_Q6L3U7 Putative RNase H domain containing protein [Solanum demissum]
Length = 722
Score = 65.9 bits (159), Expect = 6e-10
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 5 NSKLSASSSITEFTILKAFNVSIHPPRSMLV----KEVLWSPPIHSWIKGNCVGAFASGK 60
N K+S + F I ++ ++ S+ K V W+ P + +K N G+F+SG
Sbjct: 327 NLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGN 386
Query: 61 AACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVV 120
A G I R+ + + F+ S ++ AE A I + + ++N +LE DS LVV
Sbjct: 387 AGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVV 446
Query: 121 QAFKNSAIVPWQVRNRWNNCQIIISNMNFLASHIYREGNSCADVLA 166
+N +++ + +++ MN +H YRE N AD LA
Sbjct: 447 DMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVADALA 492
>UniRef100_Q5XWN7 Hypothetical protein [Solanum tuberosum]
Length = 1095
Score = 65.9 bits (159), Expect = 6e-10
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 5 NSKLSASSSITEFTILKAFNVSIHPPRSMLV----KEVLWSPPIHSWIKGNCVGAFASGK 60
N K+S + F I ++ ++ S+ K V W+ P + +K N G+F+SG
Sbjct: 505 NLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGN 564
Query: 61 AACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVV 120
A G I R+ + + F+ S ++ AE A I + + ++N +LE DS LVV
Sbjct: 565 AGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVV 624
Query: 121 QAFKNSAIVPWQVRNRWNNCQIIISNMNFLASHIYREGNSCADVLA 166
+N +++ + +++ MN +H YRE N AD LA
Sbjct: 625 DMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVADALA 670
>UniRef100_Q655G6 Hypothetical protein P0009H10.11 [Oryza sativa]
Length = 240
Score = 62.8 bits (151), Expect = 5e-09
Identities = 43/137 (31%), Positives = 62/137 (44%), Gaps = 8/137 (5%)
Query: 39 LWSPPIHSWIKGNCVGA--FASGKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGAM 96
+W P W+K N G+ ++G A+ GG++R+ G FL +AE + S AEL
Sbjct: 78 IWRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALR 137
Query: 97 RSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIISNM----NFLAS 152
R +E A W W E DS VV + A V Q C+ I + + + S
Sbjct: 138 RGLELAVRNGWRRVWAEGDSKAVVDVVCDRADV--QSEEDLRLCREIAALLPQLDDMAVS 195
Query: 153 HIYREGNSCADVLANIG 169
H+ R GN A A +G
Sbjct: 196 HVRRGGNKVAHGFAELG 212
>UniRef100_Q6K204 Hypothetical protein B1469H02.35 [Oryza sativa]
Length = 212
Score = 62.0 bits (149), Expect = 9e-09
Identities = 42/136 (30%), Positives = 60/136 (43%), Gaps = 8/136 (5%)
Query: 40 WSPPIHSWIKGNCVGA--FASGKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGAMR 97
W P WIK N G+ A+ A+ GG++R+ G F+ +AE + S AEL R
Sbjct: 51 WRKPEAGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLGYAERIGRATSSVAELAALRR 110
Query: 98 SIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIISNM----NFLASH 153
+E W W E DS VV + A V + C+ I + + + SH
Sbjct: 111 GLELVVRNGWRRVWAEGDSKTVVDVVCDRANV--RSEEDLRQCREIAALLPLIDDMAVSH 168
Query: 154 IYREGNSCADVLANIG 169
+YR GN A A +G
Sbjct: 169 VYRSGNKVAHGFARLG 184
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 61.6 bits (148), Expect = 1e-08
Identities = 48/167 (28%), Positives = 74/167 (43%), Gaps = 4/167 (2%)
Query: 33 MLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGNSLFA 90
++ + + W P W+ N GA G+A GG+ R+ G +L FA + ++ A
Sbjct: 501 LVERMIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLA 560
Query: 91 ELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIIS-NMNF 149
EL G + A + W LE DS LVV ++ + C IS +
Sbjct: 561 ELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIV 620
Query: 150 LASHIYREGNSCADVLANIGLTLD-TYVYYYSLPLQVRSDYVKNRLG 195
+H+YRE N AD LAN TL ++ S P V S +++ +G
Sbjct: 621 RITHVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSILLEDVMG 667
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 59.7 bits (143), Expect = 5e-08
Identities = 47/147 (31%), Positives = 62/147 (41%), Gaps = 4/147 (2%)
Query: 30 PRSMLVKEVL-WSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGN 86
P + V+ ++ W P W+K GA G AA GG RN G++LG FA +
Sbjct: 1052 PNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCA 1111
Query: 87 SLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQ-IIIS 145
+ AEL GA + A K + L+ D LVV + CQ
Sbjct: 1112 APLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTR 1171
Query: 146 NMNFLASHIYREGNSCADVLANIGLTL 172
+ SH+YRE N AD LAN TL
Sbjct: 1172 DWLVRVSHVYREANRLADGLANYAFTL 1198
>UniRef100_Q9SI81 F23N19.5 [Arabidopsis thaliana]
Length = 233
Score = 57.8 bits (138), Expect = 2e-07
Identities = 48/157 (30%), Positives = 65/157 (40%), Gaps = 7/157 (4%)
Query: 31 RSMLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGNSL 88
RS + ++V WS P W K N GA G A GG RN G++ CF L+ G L
Sbjct: 56 RSRMERQVRWSKPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEW--CFGFALNIGRCL 113
Query: 89 --FAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIIS- 145
AEL G + A + LE DS +VV + + C +S
Sbjct: 114 APLAELWGVYYGLFMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSR 173
Query: 146 NMNFLASHIYREGNSCADVLANIGLTLDTYVYYYSLP 182
+ H+YRE N AD LAN L + ++ P
Sbjct: 174 DWIVRIGHVYREANRLADGLANYAFDLPLGYHAFASP 210
>UniRef100_Q5Z8I2 Hypothetical protein P0622F03.7 [Oryza sativa]
Length = 217
Score = 57.8 bits (138), Expect = 2e-07
Identities = 44/151 (29%), Positives = 71/151 (46%), Gaps = 15/151 (9%)
Query: 26 SIHPPRSMLVKEVLWSPPIHSWIKGNCVGAF---ASGKAACGGIFRNRLGQFLGCFAEGL 82
S PP + + V W+PP H W+K N G+ SG+A+ GG+ R+ G+ L FAE
Sbjct: 32 SFSPPTRITL--VRWTPPRHGWVKLNFDGSVHNDGSGRASIGGVIRDDHGRVLLAFAERT 89
Query: 83 SYGNSLFAELCGAMRSIEFAQSKSWNN-FWLETDSMLVVQAFK----NSAIVPWQVRN-R 136
+ E +R ++ A WN+ +E D + +V+ + ++ I P + +
Sbjct: 90 PHATIGVVEARALIRGLQLALDHGWNDRLLVEGDDLTLVRLLRCESTHTRIPPAMLDDIL 149
Query: 137 WNNCQIIISNMNFLASHIYREGNSCADVLAN 167
W ++ S H YREGN AD L +
Sbjct: 150 W----LLDSFRVCEVQHAYREGNQVADALCH 176
>UniRef100_Q9ZUY7 Putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 57.8 bits (138), Expect = 2e-07
Identities = 48/153 (31%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 38 VLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGA 95
+ WS P W K N GA G A+ GG+ R+ G + G FA + ++ AEL G
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203
Query: 96 MRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIIS-NMNFLASHI 154
+ A + +E DS +VV K + C IS + SH+
Sbjct: 204 YYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHV 263
Query: 155 YREGNSCADVLANIGLTLDTYVYYYSLPLQVRS 187
YRE N AD LAN Y +SLPL S
Sbjct: 264 YREANRLADGLAN---------YAFSLPLGFHS 287
>UniRef100_Q8H8C0 Hypothetical protein OJ1134F05.9 [Oryza sativa]
Length = 210
Score = 57.8 bits (138), Expect = 2e-07
Identities = 42/136 (30%), Positives = 63/136 (45%), Gaps = 6/136 (4%)
Query: 40 WSPPIHSWIKGNCVGAF--ASGKAACGGIFRNRLGQFLGCFAEGLSYG--NSLFAELCGA 95
W P W+K N G+ A+G A+ GG FR+ G F+ +AE + G +S AEL
Sbjct: 47 WRKPEVGWMKLNFDGSRNDATGAASIGGAFRDHEGAFVAGYAERMIVGGASSFTAELAAL 106
Query: 96 MRSIEFAQSKSWNNFWLETDSMLVVQAFKNSA-IVPWQVRNRWNNCQIIISNMNFLA-SH 153
R +E A W W E DS VV A + + R + ++ ++ +A SH
Sbjct: 107 RRGLELAARYGWRRVWAEGDSRAVVDVVHGRAGVRSEEDRRQCGEIAALLPALDGVAVSH 166
Query: 154 IYREGNSCADVLANIG 169
+ R+ N A A +G
Sbjct: 167 LCRDENKVAHGFAKLG 182
>UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 57.4 bits (137), Expect = 2e-07
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 7/182 (3%)
Query: 16 EFTILKAFNVSIHPPRSMLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQ 73
E I AF S + + V W P W+K N GA G A GG+ R+ G
Sbjct: 129 EVAIANAFVKGNEVRVSRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGA 188
Query: 74 FLGCFAEGLSYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQV 133
++G FA + ++ AEL G + A + LE DS +VV +
Sbjct: 189 WIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPL 248
Query: 134 RNRWNNCQIIISNMNFL-ASHIYREGNSCADVLANIGLTLDTYVYYYSLPLQVRSDYVKN 192
C +S + SH+YRE N AD LAN +L ++ L+ R D V +
Sbjct: 249 SFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLHL----LESRPDVVSS 304
Query: 193 RL 194
L
Sbjct: 305 IL 306
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 57.0 bits (136), Expect = 3e-07
Identities = 45/148 (30%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 28 HPPRSMLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYG 85
H R+ + + + W P W+K GA G AA G N G++LG FA +
Sbjct: 790 HVKRARVERMIRWKAPSDRWVKLTTDGASRGHQGLAAASGAILNLQGEWLGGFALNIGSC 849
Query: 86 NSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQ-III 144
++ AEL GA + A K + L DS LVV + CQ
Sbjct: 850 DAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQGFFT 909
Query: 145 SNMNFLASHIYREGNSCADVLANIGLTL 172
+ SH+YRE N AD LAN L
Sbjct: 910 RDWLVRVSHVYREANRLADGLANYAFFL 937
>UniRef100_Q9LNS0 F1L3.4 [Arabidopsis thaliana]
Length = 253
Score = 52.8 bits (125), Expect = 6e-06
Identities = 40/138 (28%), Positives = 59/138 (41%), Gaps = 3/138 (2%)
Query: 38 VLWSPPIHSWIKGNCVGAFASGK--AACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGA 95
+ WSPP W K N GA A GG+ R+ G + F+ + ++ AEL GA
Sbjct: 83 IAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGA 142
Query: 96 MRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIIS-NMNFLASHI 154
+ A + +E DS +VV + + C ++S + + SH+
Sbjct: 143 YYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHV 202
Query: 155 YREGNSCADVLANIGLTL 172
YRE N AD LAN L
Sbjct: 203 YREANRLADGLANYAFFL 220
>UniRef100_Q9LQJ0 F28G4.15 protein [Arabidopsis thaliana]
Length = 272
Score = 52.8 bits (125), Expect = 6e-06
Identities = 40/138 (28%), Positives = 59/138 (41%), Gaps = 3/138 (2%)
Query: 38 VLWSPPIHSWIKGNCVGAFASGK--AACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGA 95
+ WSPP W K N GA A GG+ R+ G + F+ + ++ AEL GA
Sbjct: 102 IAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGA 161
Query: 96 MRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIIS-NMNFLASHI 154
+ A + +E DS +VV + + C ++S + + SH+
Sbjct: 162 YYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHV 221
Query: 155 YREGNSCADVLANIGLTL 172
YRE N AD LAN L
Sbjct: 222 YREANRLADGLANYAFFL 239
>UniRef100_Q9SHY0 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 52.8 bits (125), Expect = 6e-06
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 5/160 (3%)
Query: 25 VSIHPPRSMLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGL 82
V I PR + + + W P W+K N GA G A+ GG+ R+ G + G F+ +
Sbjct: 548 VGITQPR--VERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNI 605
Query: 83 SYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQ- 141
++ AEL G + FA K LE DS ++V K + C
Sbjct: 606 GRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHG 665
Query: 142 IIISNMNFLASHIYREGNSCADVLANIGLTLDTYVYYYSL 181
+ + H+YRE N AD LAN +L + + L
Sbjct: 666 FLQKDWLVRIVHVYREANRLADGLANYAFSLSLGFHSFDL 705
>UniRef100_Q9LDL8 Hypothetical protein AT4g08830 [Arabidopsis thaliana]
Length = 947
Score = 50.8 bits (120), Expect = 2e-05
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 31 RSMLVKEVLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGNSL 88
R+ + + V W PP W+K N GA G A GG+ R+ +G + G FA + ++
Sbjct: 832 RTRVERLVAWKPPDGEWVKLNTDGASRGNLGLATTGGVLRDGIGHWCGGFALDIGVCSAP 891
Query: 89 FAELCGAMRSIEFAQSKSWNNFWLETDSMLVV 120
AEL G + A + + LE DS LVV
Sbjct: 892 LAELWGVYYGLYMAWERRFTRVELEVDSELVV 923
>UniRef100_Q9FXC8 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 49.3 bits (116), Expect = 6e-05
Identities = 41/130 (31%), Positives = 56/130 (42%), Gaps = 10/130 (7%)
Query: 59 GKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSML 118
G A GG+ R+ G + G FA + ++ AEL G A +K+ LE DS L
Sbjct: 656 GLATAGGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLAWTKALTRVELEVDSEL 715
Query: 119 VVQAFKNSAIVPWQVRNRWNNCQIIIS-NMNFLASHIYREGNSCADVLANIGLTLDTYVY 177
VV K + C ++S + +H+YRE N AD LAN Y
Sbjct: 716 VVGFLKTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRLADGLAN---------Y 766
Query: 178 YYSLPLQVRS 187
+SLPL S
Sbjct: 767 AFSLPLGFHS 776
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 49.3 bits (116), Expect = 6e-05
Identities = 41/159 (25%), Positives = 69/159 (42%), Gaps = 8/159 (5%)
Query: 38 VLWSPPIHSWIKGNCVGAFAS--GKAACGGIFRNRLGQFLGCFAEGLSYGNSLFAELCGA 95
V W PP H W+K N GA++ G G + RN G+ L L S+ A
Sbjct: 1213 VKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEA 1272
Query: 96 MRSIEFAQSK-SWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIISNMNFLA-SH 153
+R + S+ ++ E+DS +V +N +P + R + + ++ + +
Sbjct: 1273 LRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIP-SLAPRIQDIRNLLRHFEEVKFQF 1331
Query: 154 IYREGNSCADVLANIGLTLDTYVYYYSLPLQVRSDYVKN 192
REGN+ AD A L+L + Y + D++KN
Sbjct: 1332 TRREGNNVADRTARESLSL---MNYDPKMYSITPDWIKN 1367
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.135 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 336,032,264
Number of Sequences: 2790947
Number of extensions: 12815542
Number of successful extensions: 25148
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 25094
Number of HSP's gapped (non-prelim): 69
length of query: 204
length of database: 848,049,833
effective HSP length: 121
effective length of query: 83
effective length of database: 510,345,246
effective search space: 42358655418
effective search space used: 42358655418
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 72 (32.3 bits)
Medicago: description of AC149197.4