
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149131.14 + phase: 0
(28 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q51616 , complete genome [Plasmid ColE1] 41 0.010
>UniRef100_Q51616 , complete genome [Plasmid ColE1]
Length = 59
Score = 40.8 bits (94), Expect = 0.010
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 3 YFLLTHLCGISHRIWCTLSTICSDAA 28
+FLLTHLCGISH W T TI +DAA
Sbjct: 12 HFLLTHLCGISHPAWRTFHTIRTDAA 37
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.337 0.140 0.519
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,486,647
Number of Sequences: 2790947
Number of extensions: 622870
Number of successful extensions: 1990
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1989
Number of HSP's gapped (non-prelim): 1
length of query: 28
length of database: 848,049,833
effective HSP length: 4
effective length of query: 24
effective length of database: 836,886,045
effective search space: 20085265080
effective search space used: 20085265080
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC149131.14