BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149039.3 + phase: 0 /pseudo
         (2185 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 1105  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   517  e-144
UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]                      450  e-124
UniRef100_Q40580 Integrase [Nicotiana tabacum]                        422  e-116
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                  421  e-115
UniRef100_Q6L974 GAG-POL [Vitis vinifera]                             416  e-114
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   414  e-113
UniRef100_Q7XL20 OSJNBa0079M09.11 protein [Oryza sativa]              389  e-106
UniRef100_Q60D74 Putative polyprotein [Oryza sativa]                  389  e-106
UniRef100_Q8S0W5 Putative polyprotein [Oryza sativa]                  389  e-106
UniRef100_Q65WT1 Putative polyprotein [Oryza sativa]                  387  e-105
UniRef100_Q6L5D6 Putative polyprotein [Oryza sativa]                  387  e-105
UniRef100_Q65WT8 Putative polyprotein [Oryza sativa]                  385  e-104
UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris]       385  e-104
UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris]       385  e-104
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      382  e-104
UniRef100_Q5W7A0 Putative polyprotein [Oryza sativa]                  377  e-102
UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa]               371  e-100
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          370  e-100
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               370  e-100

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 1105 bits (2859), Expect = 0.0
 Identities = 508/718 (70%), Positives = 620/718 (85%), Gaps = 8/718 (1%)

Query: 1469 AIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVV 1528
            AIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK  +
Sbjct: 1551 AIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPAL 1610

Query: 1529 TGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKD 1588
            TG++ARWQ++L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMYLK KD
Sbjct: 1611 TGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKD 1670

Query: 1589 CEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEY 1648
            C+EPL++EGPDP+ KW L+FDGAVN  G G+GAV+++P+G H+PF+AR+ F+ TNN AEY
Sbjct: 1671 CKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEY 1730

Query: 1649 EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVE 1708
            EACI GIEEAID+RIK LDI+GDSALV+NQ+ G+W T+   LIPYRDY RR+LT+F KV+
Sbjct: 1731 EACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVK 1790

Query: 1709 LHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVD 1768
            L+H+PRDENQMADALATLSSM +VN WN VP + V RLERP++VFA   V       V+D
Sbjct: 1791 LYHVPRDENQMADALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESV-------VID 1843

Query: 1769 YKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLD-GDILYKRNYDMVLLRCVDEH 1827
             KPWYYDIK FL ++EYP GASK DKKTLRRL   F L+  D+LYKRN+DMVLLRC+D  
Sbjct: 1844 EKPWYYDIKNFLKTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRP 1903

Query: 1828 EAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHV 1887
            EA+ LM +VH+G+F THA GH M++KLLRAGYYWM ME DC+++ARKCHKCQIYAD++HV
Sbjct: 1904 EADMLMQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHV 1963

Query: 1888 PPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVV 1947
            PP  LNV++SPWPF+MWGIDMIG+IEP ASNGH FILVAIDYFTKWVEAASY N+TKQVV
Sbjct: 1964 PPSPLNVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVV 2023

Query: 1948 AKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATN 2007
             +FIK  IICRYGVP +IITDNG+NLNN +++ LC++FKIEHHNSSPYRP+MNGAVEA N
Sbjct: 2024 TRFIKKEIICRYGVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAAN 2083

Query: 2008 KNIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2067
            KNIK+IV+KMV TYKDWHEMLP+ALHGYRT+VR+STGATP+SLVYGMEAVLP+EVEIPSL
Sbjct: 2084 KNIKKIVRKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSL 2143

Query: 2068 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKVGEL 2127
            RV+++ KL EAEW ++R+++L+LIEE+R+  V  GQ YQ RMK AFD+KV PR +++G+L
Sbjct: 2144 RVLLDVKLDEAEWIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDL 2203

Query: 2128 VLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
            VLKR +    D RGKWTPNYEGPYVVKK FSGGAL+LT MDG + P+PVN+D+VKKYF
Sbjct: 2204 VLKRILPPGTDNRGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYF 2261



 Score =  154 bits (390), Expect = 2e-35
 Identities = 99/320 (30%), Positives = 152/320 (46%), Gaps = 9/320 (2%)

Query: 3   QLRTELASLREELAKAHDAMTALLAAQEQPAPVVSAAANVIPTATTDPRFTMPPGYPYGL 62
           Q++TELA +R  +A+    M  +   QE+   +V     V P     P   +P G P   
Sbjct: 3   QVQTELAEMRANMAQFMHMMQGVAQGQEELRALVQRQEAVTPP----PNQALPEGNPVHD 58

Query: 63  PPYYTANTGAGTSGTTSNG-PISGANLTP--VSTALTQAATTVTEPIVNTVPQFVHANAH 119
            P           G    G  + G  + P   +  +  A      PIV+         + 
Sbjct: 59  TPAAAIPVNNYAVGEELMGIRVDGQPIAPDAANARVIHAPARNRIPIVDRQEDLFTMFSE 118

Query: 120 RGSIATTGTMEERMEELAKELRREIKANRGNGDSIKTQDLCLVSKVDVPKKFKVPEFDKY 179
              I       +R  +   E  R ++     G  +   ++ LV  + +P KFK P FDKY
Sbjct: 119 DEDIPGRNDARDRKVDALAEKIRAMECQNSLGFDVT--NMGLVEGLRIPYKFKAPSFDKY 176

Query: 180 NGLTCPQNHIVKYVRKMSNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKDDVHTFDELAAA 239
           NG +CP+ H+  Y RK+S Y D++ + ++ FQDSL   + +WY  L  D +  + +L  A
Sbjct: 177 NGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKSDSIRCWRDLGEA 236

Query: 240 FKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTL 299
           F   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+T  F+ TL
Sbjct: 237 FLRQYKHNMDMAPSRTQLQSLCQKSNESFKEYAQRWRELAARVQPPMLERELTDMFIGTL 296

Query: 300 KKDYVERMIIAAPNNFSEMV 319
           +  +++RM      +FS++V
Sbjct: 297 QGVFMDRMGSCPFGSFSDVV 316



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 26/51 (50%), Positives = 38/51 (73%), Gaps = 2/51 (3%)

Query: 1421 NFEFPVHDAE--NEEDDDIPYEITRLLEQEGRAIQPHQEEIEIINFGIPTA 1469
            +F+ P++ AE  +EED ++P E+ RLL+QE R IQPHQEE+E++N G   A
Sbjct: 1121 DFDNPIYQAEEESEEDCELPAELVRLLKQEERVIQPHQEELEVVNLGTEDA 1171


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  517 bits (1331), Expect = e-144
 Identities = 290/751 (38%), Positives = 423/751 (55%), Gaps = 36/751 (4%)

Query: 1449 GRAIQPHQEEIEIINFGIPTAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNH 1508
            G  +  H +E      G   A YYLS+     E  Y+ +EK C AL +A K+LRHY++ H
Sbjct: 2147 GALLAQHNDE------GKEVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLAH 2200

Query: 1509 TTWLISRMDPIKYIFEKAVVTGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDD 1568
               LI+R DPI+Y+  + V+TG++ +W +L+ EYDI F  QKAIKG  LA+ LA  P+ D
Sbjct: 2201 QIQLIARADPIRYVLSQPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMPD 2260

Query: 1569 YQPIEFDFPDEEIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGA----VNAYGK-----GI 1619
              P+  + PDEEI   + ++              +W L FDGA    +N  G      G 
Sbjct: 2261 DSPLIANLPDEEIFTAELQE--------------QWELYFDGASRKDINPDGTPRRRAGA 2306

Query: 1620 GAVIVSPQGHHIPFTARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQ 1678
            G V  +PQG  I  +  +L E C+NN AEYEA IFG+  A+ M ++ L  +GDS L+I Q
Sbjct: 2307 GLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQ 2366

Query: 1679 IKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV 1738
            I   +E    +L+PY   ARRL+  F  +E+ H+PR +N  ADALA L++       N  
Sbjct: 2367 INNIYEVRKPELVPYYTVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPA 2426

Query: 1739 PIIKVQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLR 1798
             I+  +R   P+ +  I + ++    N  + + W      +      P      +++ L+
Sbjct: 2427 QIVVEERWLLPAVLELIPEEVNIIITNSAEEEDWRQPFLDYFKHGSLPE--DPVERRQLQ 2484

Query: 1799 RLTSRFLLDGDILYKRNYDM-VLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRA 1857
            R    ++    +LYKR+Y   VLLRCVD  EA +++ +VH G    H +G  M   +   
Sbjct: 2485 RRLPSYIYKAGVLYKRSYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLV 2544

Query: 1858 GYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKAS 1917
            GYYW  +  DC + A+ CH CQI+ +  H PP  L+     WPF  WGID+IG I P +S
Sbjct: 2545 GYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSS 2604

Query: 1918 NGHHFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNV 1977
             GH FIL A DYF+KW EA     V    V  F++ +II R+GVP +I +DN     +  
Sbjct: 2605 RGHRFILTATDYFSKWAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQK 2664

Query: 1978 VQALCEEFKIEHHNSSPYRPQMNGAVEATNKNIKRIVQKMVTTY-KDWHEMLPYALHGYR 2036
            +    E++KI+ + S+ Y PQ NG  EA NK + +I++K V  + +DWH+ L  AL  YR
Sbjct: 2665 IYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYR 2724

Query: 2037 TTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRM 2096
             TVR+ T ATP+SLVYG EAVLPLE+++PSLRV +  +L++ E  + R+ +L+ +EE+R+
Sbjct: 2725 VTVRTPTQATPYSLVYGNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERL 2784

Query: 2097 DAVARGQSYQARMKTAFDKKVHPREFKVGE--LVLKRRISQQPDPRGKWTPNYEGPYVVK 2154
             A+   + Y+  M  A+DK V  R F+ GE  LVL+R I      +GK+ P +EGPYV++
Sbjct: 2785 GALQNLELYRQNMVRAYDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIE 2844

Query: 2155 KAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
            +A+ GGA  L    G +   P+N   +KKYF
Sbjct: 2845 QAYDGGAYQLIDHQGSQPMPPINGRFLKKYF 2875


>UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]
          Length = 1262

 Score =  450 bits (1158), Expect = e-124
 Identities = 249/683 (36%), Positives = 378/683 (54%), Gaps = 36/683 (5%)

Query: 1449 GRAIQPHQEEIEIINFGIPTAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNH 1508
            G  +  H +E      G   A YYLS+     E  Y+ +EK C AL +A K+LRHY++ H
Sbjct: 601  GALLAQHNDE------GKEVACYYLSRTMVGAERNYSPIEKLCLALIFALKKLRHYMLTH 654

Query: 1509 TTWLISRMDPIKYIFEKAVVTGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDD 1568
               LI+ +DPI+Y+  + ++ G++ +W +L+ E+DI +  QKA+KG  LA+ LA  P+ D
Sbjct: 655  QIQLIATVDPIRYVLSQPLLAGRLGKWALLMMEFDITYVPQKAVKGQALAEFLAAHPVPD 714

Query: 1569 YQPIEFDFPDEEIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGK---------GI 1619
              P+  + PDE++  +++    EP           W L FDGA               G 
Sbjct: 715  DSPLITELPDEDVFTIET----EP----------SWELCFDGASRTENDRDGTPRKRAGA 760

Query: 1620 GAVIVSPQGHHIPFTARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQ 1678
            G V  +PQG  I  +  +L E C+NN AEYEA IFG+  A+ M ++ + +YGDS L++ Q
Sbjct: 761  GLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIVQQ 820

Query: 1679 IKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV 1738
            I   +E    +L+PY   ARRL+  F  +E+ H+PR  N  ADALA L++   +      
Sbjct: 821  INDIYEVLKQELVPYYSAARRLMEMFGHIEVMHVPRSRNAPADALAKLAAALVLPQGGPT 880

Query: 1739 PIIKVQRLERPSHVFAIGDV--IDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKT 1796
             +   +R   P+ +  + +   +D           W      +      P  +   +++ 
Sbjct: 881  QVNVEERWLLPAVLELLPNEYEVDTVMAAAAKEDDWRVPFLNYFRHGSLPDNSV--ERRQ 938

Query: 1797 LRRLTSRFLLDGDILYKRNYDM-VLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLL 1855
            L+R    ++    + Y+R+Y   VLLRCVD  EA++ + +VH G    H +G  M   + 
Sbjct: 939  LQRRLPSYVYKSGVSYRRSYGQEVLLRCVDRLEADKALQEVHHGVCGGHQSGPKMYHSIR 998

Query: 1856 RAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPK 1915
             AGYYW  +  DC + A+ CH CQI+ D  H+PP  L+     WPF  WGID+IG I+P 
Sbjct: 999  LAGYYWPEIMADCLKVAKSCHGCQIHGDFKHLPPVPLHPTVPAWPFEAWGIDVIGPIDPP 1058

Query: 1916 ASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNN 1975
            +S GH FI    DYF+KW EA S   V    V  F++ +II R+GVP +I +DNG    +
Sbjct: 1059 SSRGHRFIFAITDYFSKWAEAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFKS 1118

Query: 1976 NVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKNIKRIVQKMVTTY-KDWHEMLPYALHG 2034
            + +Q    ++KI  + S+ Y PQ NG +EA NK + +I++K+V  + +DWH+ L  AL  
Sbjct: 1119 HKMQRFIAKYKIRWNYSTGYYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALWA 1178

Query: 2035 YRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEK 2094
            YR TVR+ T  TP+SLVYG EAVLPLEVE+PSLRV +  ++++ E  + R+ +L+ +EE 
Sbjct: 1179 YRVTVRTPTQCTPYSLVYGSEAVLPLEVEVPSLRVAIHEEITQDEQVRLRFQELDTLEEG 1238

Query: 2095 RMDAVARGQSYQARMKTAFDKKV 2117
            R+ AV   + Y+  M  A++K V
Sbjct: 1239 RLQAVQNLELYRQNMVRAYNKLV 1261


>UniRef100_Q40580 Integrase [Nicotiana tabacum]
          Length = 382

 Score =  422 bits (1085), Expect = e-116
 Identities = 196/342 (57%), Positives = 261/342 (76%), Gaps = 2/342 (0%)

Query: 1844 HATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSM 1903
            H  G  +S+K+LRAGY+WM ME DC ++ +KCH+CQIYAD + VPP+ LN  S+PWPF+ 
Sbjct: 26   HMNGFVLSKKILRAGYFWMTMETDCIRYVQKCHQCQIYADMMRVPPNKLNATSAPWPFAA 85

Query: 1904 WGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPS 1963
            WG+D+IG IEP ASN H FILVAIDYFTKWVEAASY  VTK+VV  F+++ I+CR+ VP 
Sbjct: 86   WGMDIIGPIEPTASNWHKFILVAIDYFTKWVEAASYKVVTKKVVTDFVRDCIVCRFEVPE 145

Query: 1964 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKNIKRIVQKMVTTYKD 2023
             IITDN  NL++ +++A+C+ FKI+H NS+ Y PQMNG VEA NKNIK+I++KMV  +K+
Sbjct: 146  SIITDNAANLHSALMKAMCDTFKIKHKNSTAYMPQMNGVVEAANKNIKKILRKMVDNHKE 205

Query: 2024 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQS 2083
            WHE LP+AL GY T V +S GATP+ LVY  EAV+ +EVEI SLR+I E  LS+AEW +S
Sbjct: 206  WHEKLPFALLGYCTIVCTSIGATPYLLVYSTEAVIHVEVEITSLRIIQEDVLSDAEWIRS 265

Query: 2084 RYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKW 2143
            RY+QL+LI+ KR+  V  GQ Y  RM  AF+K+V PR+F  G+LVLKR    Q + +GK+
Sbjct: 266  RYEQLSLIDGKRV--VCHGQLYHNRMSRAFNKRVKPRQFASGQLVLKRIFPHQDEAKGKF 323

Query: 2144 TPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
            +PN++GPY+V +  +GG LIL  +DG   P P+N+D+VK+Y+
Sbjct: 324  SPNWQGPYMVHRVLTGGTLILAEIDGEVWPKPINSDVVKRYY 365


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score =  421 bits (1083), Expect = e-115
 Identities = 190/261 (72%), Positives = 233/261 (88%)

Query: 1469 AIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVV 1528
            AIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK  +
Sbjct: 1553 AIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPAL 1612

Query: 1529 TGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKD 1588
            TG++ARWQ++L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMYLK KD
Sbjct: 1613 TGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVKD 1672

Query: 1589 CEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEY 1648
            CEEPL++EGPDP+ KW L+FDGAVN  G G+GAV+++P+G HIPF+AR+ F+ TNN AEY
Sbjct: 1673 CEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAEY 1732

Query: 1649 EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVE 1708
            EACI GIEEAID+RIK LDIYGDSALV+NQ+ G+W T+   LIPYRDY RR+LT+F KV 
Sbjct: 1733 EACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVR 1792

Query: 1709 LHHIPRDENQMADALATLSSM 1729
            L+H+PRDENQMADALATLSSM
Sbjct: 1793 LYHVPRDENQMADALATLSSM 1813



 Score =  149 bits (377), Expect = 7e-34
 Identities = 100/330 (30%), Positives = 156/330 (46%), Gaps = 28/330 (8%)

Query: 3   QLRTELASLREELAKAHDAMTALLAAQEQPAPVVSAAANVIPTATTDPRFTMPPGYPYG- 61
           Q++ ELA ++  +A+  + M  +   QE+   +V      IP     P    P G P   
Sbjct: 3   QVQAELAEMKANMAQFMNMMQGVAQGQEELRALVQRQEAAIPPVNHAP----PEGGPVNG 58

Query: 62  -----LPPYYTANTGAGTSGTTSNGPISGANLTPVSTALTQAATTVTEPIVNTVP----- 111
                  P      G    G   NG        P++  +  A   V  P  N  P     
Sbjct: 59  NNVAAAVPINNYAVGDELGGIRINGQ-------PIAPDVANARA-VRAPARNPAPIVDRQ 110

Query: 112 --QFVHANAHRGSIATTGTMEERMEELAKELRREIKANRGNGDSIKTQDLCLVSKVDVPK 169
              F   +     +      + +++ LA+++R     N    D     ++ LV  + +P 
Sbjct: 111 EDMFSLLSEDEDVLGRVDERDRKVDALAEKIRAMECQNSLGFD---VTNMGLVEGLRIPY 167

Query: 170 KFKVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKDD 229
           KFK P FDKYNG +CP+ H+  Y RK+S Y D++ + ++ FQDSL   + +WY  L +D 
Sbjct: 168 KFKAPSFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKRDS 227

Query: 230 VHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEE 289
           +  + +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E 
Sbjct: 228 IRCWKDLGEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRELAARVQPPMLER 287

Query: 290 EMTQTFLKTLKKDYVERMIIAAPNNFSEMV 319
           E+T  F+ TL+  +++RM      +FS++V
Sbjct: 288 ELTDMFIGTLQGVFMDRMGSCPFVSFSDVV 317



 Score = 55.1 bits (131), Expect = 2e-05
 Identities = 26/51 (50%), Positives = 36/51 (69%), Gaps = 2/51 (3%)

Query: 1421 NFEFPVHDAE--NEEDDDIPYEITRLLEQEGRAIQPHQEEIEIINFGIPTA 1469
            +F  P++ AE  +EED ++P E+ RLL QE R IQPHQEE+E++N G   A
Sbjct: 1123 DFGNPIYQAEEESEEDCELPAELVRLLRQEERVIQPHQEELEVVNLGTEDA 1173


>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
          Length = 1027

 Score =  416 bits (1070), Expect = e-114
 Identities = 249/718 (34%), Positives = 380/718 (52%), Gaps = 38/718 (5%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            IYY+S+   D ETRY+ +E    AL  AA++LR Y   H   +++   P++ I  K  +T
Sbjct: 345  IYYVSRALADVETRYSKMELISLALRSAAQKLRPYFQAHPVIVLTDQ-PLRNILHKPDLT 403

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W + LSE+ I F+ + ++KG ++AD +          +E+               
Sbjct: 404  GRMLQWAIELSEFGIEFQPRLSMKGQVMADFV----------LEYS-------------- 439

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
             +P   EG      W L  DGA  + G G+G ++ SP G H+    R+ F  +NN AEYE
Sbjct: 440  RKPGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYE 499

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
            A + G++ A+ + +  L I+ DS LV+  ++ E+E   A++  Y    R  L  FT+  +
Sbjct: 500  AILSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTI 559

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
              I R +N+ ADALA +++   +     +PI  VQ     S +     +         D 
Sbjct: 560  EKIKRADNRRADALAGIAASLSIKEAILLPI-HVQTNPSVSEI----SICSTTEAPQADD 614

Query: 1770 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDEHEA 1829
            + W  DI +++ +   P G  KQ  K +R   +RF L G  LYKR++    LRC+   EA
Sbjct: 615  QEWMNDITEYIRTGTLP-GDPKQAHK-VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEA 672

Query: 1830 EQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 1889
            + ++ ++H+G +  H+ G +++ +    GYYW  M+ +   + ++C KCQ YA   H+P 
Sbjct: 673  QYVLAELHEGIYGNHSGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPS 732

Query: 1890 HALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAK 1949
              L  IS PWPF+ WG+D++ R  P A     F+LVA DYF+KWVEA +Y +   + V K
Sbjct: 733  TTLKSISGPWPFAQWGMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTK 791

Query: 1950 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKN 2009
            F+  NIICR+G+P  II DNG   ++   +  C E  I +  S+P  PQ NG  EATNK 
Sbjct: 792  FVWKNIICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKT 851

Query: 2010 IKRIVQKMVTTYK-DWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLR 2068
            +   ++K +   K  W E LP  L  YRTT    TG TPF+L YGM+AV+P+E+ +P++ 
Sbjct: 852  LITALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIW 911

Query: 2069 VIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKVGELV 2128
                AK S+A     R   L+  +E R  A  R   YQ R    +++KV PR  K G LV
Sbjct: 912  T-NAAKQSDANMQLGR--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLV 968

Query: 2129 LKRRISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
            L++      +   GK+  N+EGPY+V KA   GA  L  +DG  L  P N   +K+Y+
Sbjct: 969  LRKFFENTTEVGAGKFQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  414 bits (1064), Expect = e-113
 Identities = 243/719 (33%), Positives = 378/719 (51%), Gaps = 59/719 (8%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            ++YLS++  + ETRY+ +EK C  L ++  RLRHYL+++   +I + D +KY+    ++ 
Sbjct: 911  VFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRHYLLSNECTVICKADVVKYMLSAPILK 970

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G+I +W   L+E+D+ +++ KAIKG  +A+ +             D+ D+ I        
Sbjct: 971  GRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV------------DYRDDSI-------- 1010

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                   G      W L FDG+V  +G GIG VI+SP+G    F   I    TNN AEYE
Sbjct: 1011 -------GSVEVVPWTLFFDGSVCTHGCGIGLVIISPRGACFEFAYTIKPYATNNQAEYE 1063

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
            A + G++   ++    ++I GDS LVI+Q+ GE+E  +  LI Y +  + L+  F  V L
Sbjct: 1064 AVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEYECKNDTLIVYNEKCQELMREFRLVTL 1123

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+ R++N  A+ LA  +S +++       +IK  ++E                  V+  
Sbjct: 1124 KHVSREQNIEANDLAQGASGYKL-------MIKHVQIEVA----------------VITA 1160

Query: 1770 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDEHEA 1829
              W Y + Q+L         S+   + LR    +++L  D LY R  D VLL+C+   +A
Sbjct: 1161 DDWRYYVYQYLQD------PSQSASRKLRYKALKYILLDDELYYRTIDGVLLKCLSTDQA 1214

Query: 1830 EQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 1889
            +  + +VH+G   TH + H M   L  AGY+W  M  DC+++ + C  CQ +      P 
Sbjct: 1215 KVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPTMLEDCFRYYKGCQDCQKFGAIQRAPA 1274

Query: 1890 HALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAK 1949
             A+N I  PWPF  WGIDMIG I P +S GH FILVA DYFTKWVEA     V      +
Sbjct: 1275 SAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFILVATDYFTKWVEAIPLKKVDSGDAIQ 1334

Query: 1950 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKN 2009
            F++ +II R G+P  I TD G+   ++      +   I+  NSSPY  Q NG  EA+NK+
Sbjct: 1335 FVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFADSMGIKLLNSSPYYAQANGQAEASNKS 1394

Query: 2010 IKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLR 2068
            + +++++ ++ Y + WH  L  AL  YR     S    P+ LVY  +A+LP EV I S R
Sbjct: 1395 LIKLIKRKISDYPRQWHTRLAEALWSYRMACHGSIQVPPYKLVYRHKAILPWEVRIGSRR 1454

Query: 2069 VIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKVGELV 2128
              ++  L+  E+     D+   + + R+ A+A+    + R+   ++KKV P++F  GEL+
Sbjct: 1455 TELQNDLTADEYSNLMADEREDLVQSRLRALAKVIKDKERVTRHYNKKVVPKDFSEGELI 1514

Query: 2129 LK--RRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
             K    I  +    GKW+PN+EGP+ + K  S GA +L  +DG      +N   +KKY+
Sbjct: 1515 WKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKGAYMLQGLDGEVYDRALNGKYLKKYY 1573


>UniRef100_Q7XL20 OSJNBa0079M09.11 protein [Oryza sativa]
          Length = 2028

 Score =  389 bits (999), Expect = e-106
 Identities = 240/738 (32%), Positives = 376/738 (50%), Gaps = 51/738 (6%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 1319 VYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGT 1377

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W + LSE+D+ F+ + AIK   LAD +A              P  E + +     
Sbjct: 1378 GRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWT-----------PAPETVSIPEAST 1426

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
            +   + +     + W + FDG+++  G G G  ++SP G  + +  R+ F  TNNMAEYE
Sbjct: 1427 DPSQLPQ----TAHWVMQFDGSLSLQGAGAGVTLISPNGDVLRYLVRLDFRATNNMAEYE 1482

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
              + G+  A  + I+ L + GDS LV+NQ+  E+     ++  Y    RR+  +F  +EL
Sbjct: 1483 GLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIEL 1542

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPS--------------HVFAI 1755
             H+PR +N +AD L+ L+S    +     P    +RL +PS              H   +
Sbjct: 1543 RHVPRRDNMIADELSRLAS----SRAQTPPGAFEERLTQPSARPDPSGETDAPDRHPRPV 1598

Query: 1756 GDVIDQAGENV---VDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILY 1812
            G       E+V   +    W  +I+ +L  +  P    ++  + ++R++ R++L    LY
Sbjct: 1599 GVQASGPEESVPSSLRLIAWISEIQTYLTDKTLPE--DREGSERVQRISKRYVLVEGTLY 1656

Query: 1813 KRNYDMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHA 1872
            +R  + +LL+C+ + +  +L+ D+H+G    H+   T+  K  R G+YW    +D     
Sbjct: 1657 RRAANGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLV 1716

Query: 1873 RKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTK 1932
            R+C  CQ +A +IH P  AL +I   WPF++WG+D++G  + +A  G  ++ VAID FTK
Sbjct: 1717 RRCRACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFK-RAPGGFEYLYVAIDKFTK 1775

Query: 1933 WVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNS 1992
            W EA     + K    KFIK  I  R+GVP++IITDNGT   + +    CE+  I+   +
Sbjct: 1776 WPEAYPVVKIDKHSALKFIK-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGIKLCFA 1834

Query: 1993 SPYRPQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSSTGATP 2047
            SP  P+ NG VE  N  I K +  K     K     W E LP  L   RTT   +TG TP
Sbjct: 1835 SPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETP 1894

Query: 2048 FSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQA 2107
            F LVYG EAVLP E+ + S R  M     EA+  Q R D L+ +EE+R  A  R   YQ 
Sbjct: 1895 FFLVYGAEAVLPSELTLRSPRATM---YCEADQDQLRRDDLDYLEERRRRAALRAARYQQ 1951

Query: 2108 RMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHM 2167
             ++    + V  R   V +LVL+R   Q      K +P +EGPY V      G++ L   
Sbjct: 1952 SLRRYHQRHVRARSLCVDDLVLRR--VQTRAGLSKLSPIWEGPYRVIGVPRPGSVRLATG 2009

Query: 2168 DGVELPNPVNADIVKKYF 2185
            DG ELPNP N + +++++
Sbjct: 2010 DGTELPNPWNIEHLRRFY 2027


>UniRef100_Q60D74 Putative polyprotein [Oryza sativa]
          Length = 1869

 Score =  389 bits (998), Expect = e-106
 Identities = 246/751 (32%), Positives = 375/751 (49%), Gaps = 59/751 (7%)

Query: 1443 RLLEQEGRAIQPHQEEIEIINFGIPTAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1502
            RL E+  R   P +E+    +  +   +Y++S+   D +TRY   +K   A+  A+++LR
Sbjct: 1169 RLGEERPRDAAPSEEDRP--HRKVQRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLR 1226

Query: 1503 HYLVNHTTWLISRMDPIKYIFEKAVVTGKIARWQVLLSEYDIVFKTQKAIKGSILADHLA 1562
            HY   H   +++   P+  I      TG++ +W + LSE+D+ F+ + AIK   LAD +A
Sbjct: 1227 HYFQAHRVTVVTSY-PLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVA 1285

Query: 1563 YQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLIDEGPDP---NSKWGLVFDGAVNAYGKGI 1619
                          P  E++ +       P    GP      + W + FDG+++  G G 
Sbjct: 1286 EWT-----------PAPELVSV-------PEASSGPSQLPHTAHWVMQFDGSLSLQGAGA 1327

Query: 1620 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1679
            G  + SP G  + +  R+ F  TNNMAEYE  + G+  A  + I+ L + GDS LV+NQ+
Sbjct: 1328 GVTLTSPSGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIRRLLVLGDSQLVVNQV 1387

Query: 1680 KGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVP 1739
              E+     ++  Y    RR+  +F  +EL H+PR +N MAD L+ L+S    +     P
Sbjct: 1388 CKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNMMADELSRLAS----SRAQTPP 1443

Query: 1740 IIKVQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRR 1799
                +RL +PS + A                 W  +I+ +L  +  P    ++  + + R
Sbjct: 1444 GAFEERLAQPSALIA-----------------WIAEIQAYLTDKTLP--EDREGSERVHR 1484

Query: 1800 LTSRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGY 1859
            ++ R++L    LY+R  + +LL+C+   +   L+ D+H+G    H+   T+  K  R G+
Sbjct: 1485 ISKRYVLVEGTLYRRAANGILLKCIPREQGVVLLADIHEGECGAHSASRTLVGKAFRQGF 1544

Query: 1860 YWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNG 1919
            YW    +D     R+C  CQ +A +IH P  AL  I   WPF++WG+ ++G    +A  G
Sbjct: 1545 YWPTALNDAVDLVRRCRACQFHAKQIHQPAQALQTIPLSWPFAVWGLHILGPFR-RAPGG 1603

Query: 1920 HHFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQ 1979
              ++ VAID FTKW EA     + K    KFIK  I  R+GVP++IITDNGT   + +  
Sbjct: 1604 FEYLYVAIDKFTKWPEAYPVVKIDKHSALKFIK-GITARFGVPNRIITDNGTQFTSELFG 1662

Query: 1980 ALCEEFKIEHHNSSPYRPQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHG 2034
              CE+  I+   +SP  P+ NG VE  N  I K +  K     K     W E LP  L  
Sbjct: 1663 DYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWA 1722

Query: 2035 YRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEK 2094
             RTT   +TG TPF LVYG EAVLP E+ + S R  M     EA+  Q R D L+ +EE+
Sbjct: 1723 NRTTPSRATGETPFFLVYGAEAVLPSELTLKSPRATM---YCEADQDQLRRDDLDYLEER 1779

Query: 2095 RMDAVARGQSYQARMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVK 2154
            R  A  R   YQ  ++      V  R   V +LVL+R   Q      K +P +EGPY V 
Sbjct: 1780 RRRAALRAARYQQSLRRYHQCHVRARSLCVDDLVLRR--VQTRAGLSKLSPMWEGPYRVV 1837

Query: 2155 KAFSGGALILTHMDGVELPNPVNADIVKKYF 2185
                 G++ L   DG ELPNP N + +++++
Sbjct: 1838 GVPRPGSIRLATGDGTELPNPWNIEHLRRFY 1868



 Score = 45.1 bits (105), Expect = 0.025
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 168 PKKFKVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHCFQDSLMEDAAEWYTSLSK 227
           P +F+    +KY+G   P   +  Y   +     +D +M + F  +L   A  W  +L  
Sbjct: 107 PPRFRPTIAEKYDGSVNPAEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPP 166

Query: 228 DDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRW 275
             VH++++L   F  ++   T  +P  E  L ++ ++ +ES R Y QR+
Sbjct: 167 ASVHSWEDLCQQFTMNFQ-GTYPRPGEEADLHAVQRRDDESLRSYIQRF 214


>UniRef100_Q8S0W5 Putative polyprotein [Oryza sativa]
          Length = 2030

 Score =  389 bits (998), Expect = e-106
 Identities = 238/734 (32%), Positives = 374/734 (50%), Gaps = 43/734 (5%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 1321 VYFISETLRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGT 1379

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W + LSE+D+ F+ + AIK   LAD +A     ++ P     P+   M   S + 
Sbjct: 1380 GRVVKWAIELSEFDLHFEPRHAIKSQALADFVA-----EWTPA----PETVSMPEASTNL 1430

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
             +          + W + FDG+++  G G G  + SP G  + +  R+ F  TNNMAEYE
Sbjct: 1431 SQL------PQTAHWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRATNNMAEYE 1484

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
              + G+  A  + I+ L + GDS LV+NQ+  E+     ++  Y    RR+  +F  +EL
Sbjct: 1485 GLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMNAYVRQVRRMERHFDGIEL 1544

Query: 1710 HHIPRDENQMADALATLSSM------------FRVNHWNDVPIIKVQRLERPSHVFAI-G 1756
             H+PR +N +AD L+ L+S                      P+ +    +RP     +  
Sbjct: 1545 RHVPRRDNMIADELSRLASSRAQTPPGAFEERLTQPSARPNPLGETDAPDRPPRAVGVQA 1604

Query: 1757 DVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNY 1816
              ++ +  N +    W  +I+ +L  +  P    +Q  + ++R++ R++L    LY+R  
Sbjct: 1605 SGLEGSAPNSLRLIAWISEIQTYLTDKTLPE--DRQGSERVQRISKRYVLVEGTLYRRAA 1662

Query: 1817 DMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCH 1876
            + +LL+C+ + +  +L+ D+H+G    H+   T+  K  R G+YW    +D     R+C 
Sbjct: 1663 NGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRRCR 1722

Query: 1877 KCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEA 1936
             CQ +A +IH P  AL +I   WPF++WG+D++G  + +A  G  ++ VAID FTKW EA
Sbjct: 1723 ACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFK-RALGGFEYLYVAIDKFTKWPEA 1781

Query: 1937 ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYR 1996
                 + K    KFIK  I  R+GVP++IITDNGT   + +    CE+  I+   +SP  
Sbjct: 1782 YPVVKIDKHSALKFIK-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPAH 1840

Query: 1997 PQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSSTGATPFSLV 2051
            P+ NG VE  N  I K +  K     K     W E LP  L   RTT   +TG TPF LV
Sbjct: 1841 PRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLV 1900

Query: 2052 YGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKT 2111
            YG EAVLP E+ + S R  M     EA+  Q R D L+ +EE+R  A  R   YQ  ++ 
Sbjct: 1901 YGAEAVLPSELTLRSPRATM---YCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRR 1957

Query: 2112 AFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVE 2171
               + V  R   V +LVL+R   Q      K +P +EGPY V      G++ L   DG E
Sbjct: 1958 YHQRHVRARSLCVDDLVLRR--VQTRAGLSKLSPIWEGPYRVIGVPRPGSVRLATGDGTE 2015

Query: 2172 LPNPVNADIVKKYF 2185
            LPNP N + +++++
Sbjct: 2016 LPNPWNIEHLRRFY 2029


>UniRef100_Q65WT1 Putative polyprotein [Oryza sativa]
          Length = 1992

 Score =  387 bits (994), Expect = e-105
 Identities = 244/743 (32%), Positives = 375/743 (49%), Gaps = 61/743 (8%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 1283 VYFVSEALRDAKTRYPQAQKMLYAVLMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGT 1341

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W + LSE+D+ F+ + AIK   LAD +A     ++ P        E+    S+  
Sbjct: 1342 GRVVKWAIELSEFDLHFEPRHAIKSQALADFVA-----EWTPAPEPVSIPEVNSDPSQ-- 1394

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                    P     W + FDG+++  G G G  + SP G  + +  R+ F  TNNMAEYE
Sbjct: 1395 --------PPHTGHWVMQFDGSLSLQGAGAGVTLTSPTGDVLRYLDRLDFRATNNMAEYE 1446

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
              + G+  A  + I+ L + GDS LV+NQ+  E+     ++  Y    RR+  +F  +EL
Sbjct: 1447 GLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMEHHFDGIEL 1506

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+PR +N +AD L+ L+S    +     P    +RL +PS   A  D + + G  V D 
Sbjct: 1507 RHVPRRDNMIADELSRLAS----SRAQTPPGAFEERLTQPS---ARPDPLGETG--VPDR 1557

Query: 1770 KP----------------------WYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLD 1807
             P                      W  +I+ +L  +  P    ++  + ++R++ R++L 
Sbjct: 1558 PPRPVGVQASGPEGSAPSSLRLIAWISEIQAYLTDKTLPE--DREGSERVQRISKRYVLV 1615

Query: 1808 GDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHD 1867
               LY+R  + +LL+C+ + +  +L+ D+H+G    H+   T+  K  R G+YW    +D
Sbjct: 1616 EGTLYRRAANGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALND 1675

Query: 1868 CYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAI 1927
                 R+C  CQ +A +IH P  AL +I   WPF++WG+D++G    +A  G  ++ VAI
Sbjct: 1676 AVDLVRRCRACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFR-RAPGGFEYLYVAI 1734

Query: 1928 DYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKI 1987
            D FTKW EA     + K    KFIK  I  R+GVP++IITDNGT   + +    CE+  I
Sbjct: 1735 DKFTKWPEAYPVIKIDKHSALKFIK-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGI 1793

Query: 1988 EHHNSSPYRPQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSS 2042
            +   +SP  P+ NG VE  N  I K +  K     K     W E LP  L   RTT   +
Sbjct: 1794 KLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRA 1853

Query: 2043 TGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARG 2102
            TG TPF LVYG EAVLP E+ + S R  M     EA+  Q R D L+ +EE+R  A  R 
Sbjct: 1854 TGETPFFLVYGAEAVLPSELTLRSPRATM---YCEADQDQLRRDDLDYLEERRRRAALRA 1910

Query: 2103 QSYQARMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGAL 2162
              YQ  ++    + V  R   V +LVL+R   Q      K +P +EGPY V      G++
Sbjct: 1911 ARYQQSLRRYHQRHVRARSLCVDDLVLRR--VQTRAGLSKLSPMWEGPYRVVGVPRPGSI 1968

Query: 2163 ILTHMDGVELPNPVNADIVKKYF 2185
             L   DG ELPNP N + +++++
Sbjct: 1969 RLATGDGTELPNPWNIEHLRRFY 1991


>UniRef100_Q6L5D6 Putative polyprotein [Oryza sativa]
          Length = 1514

 Score =  387 bits (994), Expect = e-105
 Identities = 239/724 (33%), Positives = 367/724 (50%), Gaps = 62/724 (8%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 844  VYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGT 902

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ RW + LSE+D+ F+ + AIK   LAD +A     ++ P               +  
Sbjct: 903  GRVVRWAIELSEFDLRFEPRHAIKSQALADFVA-----EWTPAP-------------EPV 944

Query: 1590 EEPLIDEGPDP---NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMA 1646
              P    GP      + W + FDG+++  G G G  + SP G  + +  R+ F  TNNMA
Sbjct: 945  SAPEASSGPTQLPHTAYWVMQFDGSLSLQGAGAGVTLTSPSGDVLRYLVRLDFRATNNMA 1004

Query: 1647 EYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTK 1706
            EYE  + G+  A  + I+ L + GDS LV+NQ+  E++    ++  Y    RR+  +F +
Sbjct: 1005 EYEGLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYQCSDPQMDAYVRQVRRMERHFDR 1064

Query: 1707 VELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENV 1766
            +EL H+PR +N +AD L+ L+S                R + P   F      ++  + +
Sbjct: 1065 IELRHVPRRDNAVADELSRLAS---------------SRAQTPPGAFE-----ERLAQPL 1104

Query: 1767 VDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDE 1826
            +    W  +I+ +L  +  P    ++  + +RR++ R++L    LY+R  + VLL+C+  
Sbjct: 1105 I---AWITEIQAYLADKTLPE--DREGSERVRRISKRYVLVEGTLYRRAANGVLLKCIPR 1159

Query: 1827 HEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIH 1886
             +  +L+ DVH+G    H+   T+  K  R G+YW    +D     R+C  CQ +A + H
Sbjct: 1160 EQGVELLADVHEGECGAHSVSRTLVGKAFRQGFYWPTALNDAVDLVRRCRACQFHARQTH 1219

Query: 1887 VPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQV 1946
             P  AL  I   WPF++WG+D++GR    A  G  ++ VA+D FTKW EA     + K  
Sbjct: 1220 QPAQALQTIPLSWPFAVWGLDILGR----APGGFEYLYVAVDKFTKWPEAYPVIKIDKHS 1275

Query: 1947 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAT 2006
              KFI+  I  R+GVP++IITDNGT   + +    CE+  I+   +SP  P+ NG VE  
Sbjct: 1276 ALKFIR-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPTHPRSNGQVERA 1334

Query: 2007 NKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2061
            N  I K +  K     K     W E LP  L   RTT   +TG TPF LVYG EAVLP E
Sbjct: 1335 NAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSE 1394

Query: 2062 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPRE 2121
            + + S RV M     EA+  Q R D L+ +EE+R  A  R   YQ  ++    + V  R 
Sbjct: 1395 LTLRSPRVTM---YCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRARS 1451

Query: 2122 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2181
              V +LVL+R   Q      K +P +EGPY V      G++ L   DG ELPNP N + +
Sbjct: 1452 LCVDDLVLRR--VQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHL 1509

Query: 2182 KKYF 2185
             +++
Sbjct: 1510 CRFY 1513


>UniRef100_Q65WT8 Putative polyprotein [Oryza sativa]
          Length = 2027

 Score =  385 bits (988), Expect = e-104
 Identities = 243/743 (32%), Positives = 374/743 (49%), Gaps = 61/743 (8%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 1318 VYFVSEALRDAKTRYPQAQKMLYAVLMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGT 1376

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W + LSE+D+ F+ + AIK   LAD +A     ++ P        E+    S+  
Sbjct: 1377 GRVVKWTIELSEFDLHFEPRHAIKSQALADFVA-----EWTPAPEPVSIPEVNSDPSQ-- 1429

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                    P     W + FDG+++  G G G  + SP G  + +  R+ F  TNNMAEYE
Sbjct: 1430 --------PPYTGHWVMQFDGSLSLQGAGAGVTLTSPTGDVLRYLVRLDFRATNNMAEYE 1481

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
              + G+  A  + I+ L + GDS LV+NQ+  E+     ++  Y    RR+  +F  +EL
Sbjct: 1482 GLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIEL 1541

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+PR +N +AD L+ L+S    +     P    +RL +PS   A  D + + G  V D 
Sbjct: 1542 RHVPRRDNMIADELSRLAS----SRAQTPPGAFEERLTQPS---ARPDPLGETG--VPDR 1592

Query: 1770 KP----------------------WYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLD 1807
             P                      W  +I+ +L  +  P    ++  + ++R++ R++L 
Sbjct: 1593 PPRPVGVQASGPEGSAPSSLRLIAWISEIQAYLTDKTLPE--DREGSERVQRISKRYVLV 1650

Query: 1808 GDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHD 1867
               LY+R  + +LL+C+ + +  +L+ D+H+G    H+   T+  K  R G+YW    +D
Sbjct: 1651 EGTLYRRAANGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALND 1710

Query: 1868 CYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAI 1927
                 R+C  CQ +A +IH P  AL +I   WPF++WG+D++G    +A  G  ++ VAI
Sbjct: 1711 AVDLVRRCRACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFR-RAPGGFEYLYVAI 1769

Query: 1928 DYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKI 1987
            D FTKW EA     + K    KFIK  I  R+GVP++IITDNGT   + +    CE+  I
Sbjct: 1770 DKFTKWPEAYPVIKIDKHSALKFIK-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGI 1828

Query: 1988 EHHNSSPYRPQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSS 2042
            +   +SP  P+ NG VE  N  I K +  K     K     W E LP  L   RTT   +
Sbjct: 1829 KLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPVVLWANRTTPSRA 1888

Query: 2043 TGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARG 2102
            T  TPF LVYG EAVLP E+ + S R  M     EA+  Q R D L+ +EE+R  A  R 
Sbjct: 1889 TRETPFFLVYGAEAVLPSELTLRSPRATM---YCEADQDQLRRDDLDYLEERRRRAALRA 1945

Query: 2103 QSYQARMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGAL 2162
              YQ  ++    + V  R   V +LVL+R   Q      K +P +EGPY V      G++
Sbjct: 1946 ARYQQSLRRYHQRHVRARSLCVDDLVLRR--VQTRAGLSKLSPMWEGPYRVIGVPRPGSI 2003

Query: 2163 ILTHMDGVELPNPVNADIVKKYF 2185
             L   DG ELPNP N + +++++
Sbjct: 2004 RLATGDGTELPNPWNIEHLRRFY 2026



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 49/225 (21%), Positives = 90/225 (39%), Gaps = 28/225 (12%)

Query: 67  TANTGAGTSGTTSN--------GPISGANLTPVSTALTQAATTVTEPIVNTVPQFVHANA 118
           T  +GA T+G+ S+          +  +  TP ST  T+      +    ++ +    N 
Sbjct: 129 TKASGAATTGSASSRRRARRAAAAVRRSAATPSSTPSTREDLRGEQDARASIER--RRND 186

Query: 119 HRGSIATTGTMEERMEELAKELRREIKANRGNGDSIKTQD-------LCLVSKVDVPKKF 171
              + AT G    R+           +  RGN  S+           +  +  V  P +F
Sbjct: 187 RSAAHATEGASSSRVSP---------RHGRGNQPSVPPVGGVGCRAFVASLRNVRWPPRF 237

Query: 172 KVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKDDVH 231
           +    +KY+G   P   +  Y   +     +D +M + F  +L   A  W  +L    VH
Sbjct: 238 RPTIAEKYDGSVNPAEFLQVYTTGIEAAGGDDRVMANFFPMTLKGQARGWLMNLPPASVH 297

Query: 232 TFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRW 275
           ++++L   F  ++   T  +P  E  L ++ ++ +ES R Y QR+
Sbjct: 298 SWEDLCQQFTMNFQ-GTYPRPGEEADLHAVQRRDDESLRSYIQRF 341


>UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  385 bits (988), Expect = e-104
 Identities = 237/732 (32%), Positives = 389/732 (52%), Gaps = 56/732 (7%)

Query: 1459 IEIINFGIPTAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDP 1518
            +E I   +P  IY++S    + E RY +LEK   A+  AA++LR Y   HT  ++S   P
Sbjct: 83   VERIKTQLP--IYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HP 139

Query: 1519 IKYIFEKAVVTGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPD 1578
            ++   +K   +G++ RW V LSE+++ +K + AIK   LAD +          +E  + +
Sbjct: 140  LEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEE 189

Query: 1579 EEIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARIL 1638
            EE                  +P   W L  DG+    G G G ++ SP+G+   F   I 
Sbjct: 190  EE------------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIK 229

Query: 1639 FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYAR 1698
            F+ +NN AEYEA I GI+  +    K + +  DS LV +QI+GE+E     +  Y    +
Sbjct: 230  FKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIK 289

Query: 1699 RLLTYFTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIG 1756
             L      +E+  +PR +N  ADAL+ L+S  +  +N    V +++ + +++   +    
Sbjct: 290  DLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC-- 347

Query: 1757 DVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNY 1816
                     V   K WY DI+++ L+ + P    +   K ++R +  +++    LYKR+ 
Sbjct: 348  ---------VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSD 396

Query: 1817 DMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCH 1876
               LLRC  E E    M +  +G    H  G  +S +++R G YW  M  DC ++ +KC 
Sbjct: 397  SYPLLRCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCD 456

Query: 1877 KCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEA 1936
            KCQ +A  ++ P + L  I +P PF+ WG+D++G     AS G  +++VA+DYFTKW+EA
Sbjct: 457  KCQKFAPVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEA 515

Query: 1937 ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYR 1996
                 +  + V  FI  NII R+G+P  I+ D+GT  + + ++  C EFKI+  +++   
Sbjct: 516  EPTKFIKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCH 575

Query: 1997 PQMNGAVEATNKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGME 2055
            PQ NG  EA NK I   +QK +  +K  W +++P  L   RTT + +TG +PFSL +G E
Sbjct: 576  PQSNGQAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAE 635

Query: 2056 AVLPLEVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFD 2114
            AV+P+EV +PS RV   + +++E    Q   + L+ + E R+ A  +  + + RM   ++
Sbjct: 636  AVVPIEVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYN 691

Query: 2115 KKVHPREFKVGELVLKRRIS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELP 2173
            ++V  R    G+LVL+R  +  + +  GK+T N+EGPY + +  + G+  L  ++G  L 
Sbjct: 692  RRVRHRPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLK 751

Query: 2174 NPVNADIVKKYF 2185
            N  NAD++KKYF
Sbjct: 752  NSFNADVLKKYF 763


>UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  385 bits (988), Expect = e-104
 Identities = 237/732 (32%), Positives = 389/732 (52%), Gaps = 56/732 (7%)

Query: 1459 IEIINFGIPTAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDP 1518
            +E I   +P  IY++S    + E RY +LEK   A+  AA++LR Y   HT  ++S   P
Sbjct: 83   VERIKTQLP--IYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HP 139

Query: 1519 IKYIFEKAVVTGKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPD 1578
            ++   +K   +G++ RW V LSE+++ +K + AIK   LAD +          +E  + +
Sbjct: 140  LEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEE 189

Query: 1579 EEIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARIL 1638
            EE                  +P   W L  DG+    G G G ++ SP+G+   F   I 
Sbjct: 190  EE------------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIK 229

Query: 1639 FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYAR 1698
            F+ +NN AEYEA I GI+  +    K + +  DS LV +QI+GE+E     +  Y    +
Sbjct: 230  FKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIK 289

Query: 1699 RLLTYFTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIG 1756
             L      +E+  +PR +N  ADAL+ L+S  +  +N    V +++ + +++   +    
Sbjct: 290  DLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC-- 347

Query: 1757 DVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNY 1816
                     V   K WY DI+++ L+ + P    +   K ++R +  +++    LYKR+ 
Sbjct: 348  ---------VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSD 396

Query: 1817 DMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCH 1876
               LLRC  E E    M +  +G    H  G  +S +++R G YW  M  DC ++ +KC 
Sbjct: 397  SYPLLRCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCD 456

Query: 1877 KCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEA 1936
            KCQ +A  ++ P + L  I +P PF+ WG+D++G     AS G  +++VA+DYFTKW+EA
Sbjct: 457  KCQKFAPVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEA 515

Query: 1937 ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYR 1996
                 +  + V  FI  NII R+G+P  I+ D+GT  + + ++  C EFKI+  +++   
Sbjct: 516  EPTKFIKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCH 575

Query: 1997 PQMNGAVEATNKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGME 2055
            PQ NG  EA NK I   +QK +  +K  W +++P  L   RTT + +TG +PFSL +G E
Sbjct: 576  PQSNGQAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAE 635

Query: 2056 AVLPLEVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFD 2114
            AV+P+EV +PS RV   + +++E    Q   + L+ + E R+ A  +  + + RM   ++
Sbjct: 636  AVVPIEVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYN 691

Query: 2115 KKVHPREFKVGELVLKRRIS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELP 2173
            ++V  R    G+LVL+R  +  + +  GK+T N+EGPY + +  + G+  L  ++G  L 
Sbjct: 692  RRVRHRPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLK 751

Query: 2174 NPVNADIVKKYF 2185
            N  NAD++KKYF
Sbjct: 752  NSFNADVLKKYF 763


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  382 bits (981), Expect = e-104
 Identities = 248/727 (34%), Positives = 366/727 (50%), Gaps = 47/727 (6%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            I+Y SK   + ETRY ++EK   A+  +A++LR Y  +HT  +++   P++        +
Sbjct: 1147 IFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQ-PLRVALHSPSQS 1205

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G++ +W V LSEYDI F+ + A+K  +LAD L   PL   +        EE         
Sbjct: 1206 GRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEE--------- 1256

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                          W L  DG+ +A G GIG  +VSP    +  + R+ F  TNN+AEYE
Sbjct: 1257 --------------WSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYE 1302

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
              I G+  A  M+I  +  + DS L+  Q+ GE+E  + K+  Y    + +   F   +L
Sbjct: 1303 VLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKL 1362

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVP-IIKVQRLERPS-----HVFAIGDVIDQAG 1763
              IPR +N  ADALA L+    +   +D+  II V+ +++PS      V  +  +     
Sbjct: 1363 SKIPRGDNAPADALAALA----LTSDSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNA 1418

Query: 1764 ENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRL---TSRFLLDGDILYKRNYDMVL 1820
             +  D   W  +I+ +L     P      DK T RRL    +++ L  + L K +    +
Sbjct: 1419 PDPADPTDWRVEIRDYLSDGTLP-----SDKWTARRLRIKAAKYTLMKEHLLKVSAFGAM 1473

Query: 1821 LRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQI 1880
            L C+   E  ++M + H+G    H+ G  ++ KL + G+YW  M  DC     KC +CQ 
Sbjct: 1474 LNCLHGTEINEIMKETHEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQR 1533

Query: 1881 YADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYT 1940
            +A  IH P   L    +P+PF  W +D++G +   AS    FILV  DYFTKWVEA SY 
Sbjct: 1534 HAPTIHQPTELLRAGVAPYPFMRWAMDIVGPMP--ASRQKRFILVMTDYFTKWVEAESYA 1591

Query: 1941 NVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 2000
             +    V  F+   IICR+G+P +IITDNG+   +   +  C  +KI  + S+P  PQ N
Sbjct: 1592 TIRANDVQNFVWKFIICRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGN 1651

Query: 2001 GAVEATNKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLP 2059
            G  EATNK I   ++K +   K  W + L   L  YRTT RS+T  TPF+  YGMEA+ P
Sbjct: 1652 GQAEATNKTILSGLKKRLDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAP 1711

Query: 2060 LEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHP 2119
             EV   SLR  M  K  E    +   D+L+ +EE R  A+ R Q+YQ      +++KVH 
Sbjct: 1712 AEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHN 1770

Query: 2120 REFKVGELVLKRRISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNA 2178
            R F VG+LVL++      +   GK   N+EG Y V K    G   L  M G  +P   N+
Sbjct: 1771 RHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNS 1830

Query: 2179 DIVKKYF 2185
              +K+Y+
Sbjct: 1831 MHLKRYY 1837



 Score = 43.1 bits (100), Expect = 0.095
 Identities = 27/113 (23%), Positives = 51/113 (44%), Gaps = 4/113 (3%)

Query: 175 EFDKYNGLTCPQNHIVKY---VRKMSNYKDN-DSLMIHCFQDSLMEDAAEWYTSLSKDDV 230
           + + YNG   P+  +  +   + +     DN D+     F + L   A  W++ L  + +
Sbjct: 220 KLESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSI 279

Query: 231 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARIT 283
            +F +L ++F  HY      + +   L S+SQ  +ES R +  R++     IT
Sbjct: 280 DSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNIT 332


>UniRef100_Q5W7A0 Putative polyprotein [Oryza sativa]
          Length = 1207

 Score =  377 bits (968), Expect = e-102
 Identities = 241/739 (32%), Positives = 367/739 (49%), Gaps = 62/739 (8%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            +Y++S+   D +TRY   +K   A+  A+++LRHY   H   +++   P+  I      T
Sbjct: 507  VYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQTHRVTVVTSY-PLGQILHNREGT 565

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLA-YQPLDDYQPIEFDFPDEEIMYLKSKD 1588
            G++ +W + LSE+D+ F+ + AIK   LAD +A + P  +  P+                
Sbjct: 566  GRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPE--PVSI-------------- 609

Query: 1589 CEEPLIDEGPDP---NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNM 1645
               P    GP      + W + FDG+++  G G G  + SP G  + +  R+ F  TNNM
Sbjct: 610  ---PEASSGPSQLPHTAYWVMQFDGSLSLQGAGAGVTLTSPSGDVLKYLVRLDFRATNNM 666

Query: 1646 AEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFT 1705
            AEYE  + G+  A  + I+ L + GDS LV+NQ+  E++    ++  Y    RR+  +F 
Sbjct: 667  AEYEGLLAGLRVAAGLGIRRLLVLGDSQLVVNQVSKEYQCSDPQMDAYVRQVRRMERHFD 726

Query: 1706 KVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGEN 1765
             +EL H+PR +N +AD L+ L+S    +     P    +RL +PS         D  GE 
Sbjct: 727  GIELRHVPRRDNAVADELSRLAS----SRAQTPPGAFEERLAQPS------ARPDPLGET 776

Query: 1766 VVDYKP--------------WYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDIL 1811
                +P              W  +I+ +L  +  P    ++  + ++R++ R++L    L
Sbjct: 777  DAPERPLRPGSAPSSLRLIAWIAEIQAYLADKTLP--EDREGSERVQRISKRYVLVEGTL 834

Query: 1812 YKRNYDMVLLRCVDEHEAEQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQH 1871
            Y+   + VLL C+   +  +L+  +H+G    H+   T+  K  R G+YW    +D    
Sbjct: 835  YRHAANGVLLECIPREQGVELLAAIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDL 894

Query: 1872 ARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFT 1931
             R+C  CQ +A + H P  AL  I   WPF+ WG+D++ R   +A  G  ++ VAID FT
Sbjct: 895  VRQCRACQFHAKQTHQPAQALQTIPLSWPFADWGLDIL-RPFIRAPGGFEYLYVAIDKFT 953

Query: 1932 KWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHN 1991
            KW EA     + K    KFI+  I  R+GVP++IITDNGT   + +    CE+  I+   
Sbjct: 954  KWPEAYPVIKIDKHSALKFIR-GITARFGVPNRIITDNGTQFTSELFGDYCEDMGIKLCF 1012

Query: 1992 SSPYRPQMNGAVEATNKNI-KRIVQKMVTTYK----DWHEMLPYALHGYRTTVRSSTGAT 2046
            +SP  P+ NG VE  N  I K +  K     K     W E LP  L   RTT   +TG T
Sbjct: 1013 ASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGET 1072

Query: 2047 PFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQ 2106
            PF LVYG EAVLP EV + S R  M     EA+  Q R D L+ +EE+R  A  R   YQ
Sbjct: 1073 PFFLVYGAEAVLPSEVTLRSPRATM---YCEADQDQLRRDDLDYLEERRRRAAIRAARYQ 1129

Query: 2107 ARMKTAFDKKVHPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTH 2166
              ++    + V  R   V +LVL+R   Q      K +P +EGPY V      G++ L  
Sbjct: 1130 QSLRRYHQRHVRARSLCVDDLVLRR--VQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLAT 1187

Query: 2167 MDGVELPNPVNADIVKKYF 2185
             DG ELPNP N + +++++
Sbjct: 1188 GDGTELPNPWNIEHLRRFY 1206


>UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa]
          Length = 1991

 Score =  371 bits (953), Expect = e-100
 Identities = 232/721 (32%), Positives = 357/721 (49%), Gaps = 44/721 (6%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            IY++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       
Sbjct: 1309 IYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREAN 1367

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +      
Sbjct: 1368 GRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH------ 1416

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                          W + FDG+    G G G V++SP G  + +   I F  ++N+AEYE
Sbjct: 1417 --------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYE 1462

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
            A + G+  AI + IKHL + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL
Sbjct: 1463 ALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLEL 1522

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+ R  N+ AD LA   S  R    +DV    V+ L  P+        +    +  +  
Sbjct: 1523 SHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQVAGTHDVAMVE 1578

Query: 1770 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDEHEA 1829
              W   + +FL S+E P    K + + + R +  ++L    LYK++   +L RCV   E 
Sbjct: 1579 ADWRESLIRFLTSQELP--QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEG 1636

Query: 1830 EQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 1889
             QL+ D+H G    HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1637 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1696

Query: 1890 HALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAK 1949
              L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1697 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1755

Query: 1950 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKN 2009
            F   +I+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE  N  
Sbjct: 1756 FF-ISIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1814

Query: 2010 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2064
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1815 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1874

Query: 2065 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKV 2124
             SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F V
Sbjct: 1875 ESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLV 1931

Query: 2125 GELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2184
            G+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1932 GDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 1989

Query: 2185 F 2185
            +
Sbjct: 1990 Y 1990



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 150 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHC 209
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M + 
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 210 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 268
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 269 REYAQRWRGAAARITPALDE 288
           R+Y +R+     +I+   D+
Sbjct: 532 RDYIRRFSEQRNKISDITDD 551


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  370 bits (949), Expect = e-100
 Identities = 233/721 (32%), Positives = 356/721 (49%), Gaps = 44/721 (6%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            IY++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       
Sbjct: 1330 IYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREAN 1388

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +      
Sbjct: 1389 GRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH------ 1437

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                          W + FDG+    G G G V++SP G  + +   I F  ++N+AEYE
Sbjct: 1438 --------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYE 1483

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
            A + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL
Sbjct: 1484 ALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLEL 1543

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+ R  N+ AD LA   S  R    +DV    V+ L  P+           A +  +  
Sbjct: 1544 SHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQAAGAHDVAMVE 1599

Query: 1770 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDEHEA 1829
              W   + +FL S+E P    K + + + R +  ++L    LYK++   +L RCV   E 
Sbjct: 1600 ADWREPLIRFLTSQELP--QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEG 1657

Query: 1830 EQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 1889
             QL+ D+H G    HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1658 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1717

Query: 1890 HALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAK 1949
              L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1718 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1776

Query: 1950 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKN 2009
            F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE  N  
Sbjct: 1777 FF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1835

Query: 2010 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2064
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1836 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEF 1895

Query: 2065 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKV 2124
             SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F V
Sbjct: 1896 ESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLV 1952

Query: 2125 GELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2184
            G+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1953 GDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 2010

Query: 2185 F 2185
            +
Sbjct: 2011 Y 2011



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 150 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHC 209
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M + 
Sbjct: 415 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 471

Query: 210 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 268
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 472 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 530

Query: 269 REYAQRWRGAAARITPALDE 288
           R+Y +R+     +I+   D+
Sbjct: 531 RDYIRRFSEQRNKISDITDD 550


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  370 bits (949), Expect = e-100
 Identities = 233/721 (32%), Positives = 357/721 (49%), Gaps = 44/721 (6%)

Query: 1470 IYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVT 1529
            IY++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I     V 
Sbjct: 1331 IYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREVN 1389

Query: 1530 GKIARWQVLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDC 1589
            G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +      
Sbjct: 1390 GRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH------ 1438

Query: 1590 EEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYE 1649
                          W + FDG+    G G G V++SP G  + +   I F  ++N+AEYE
Sbjct: 1439 --------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYE 1484

Query: 1650 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1709
            A + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL
Sbjct: 1485 ALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRKLEDKFDGLEL 1544

Query: 1710 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDY 1769
             H+ R  N+ AD LA   S  R    +DV    V+ L  P+        +    +  +  
Sbjct: 1545 SHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQVAGTHDAAMVE 1600

Query: 1770 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLTSRFLLDGDILYKRNYDMVLLRCVDEHEA 1829
              W   + +FL S+E P    K + + + R +  ++L    LYK++   +L RCV   E 
Sbjct: 1601 VDWREPLIRFLTSQELP--QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEG 1658

Query: 1830 EQLMHDVHDGTFRTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 1889
             QL+ D+H G    HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1659 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1718

Query: 1890 HALNVISSPWPFSMWGIDMIGRIEPKASNGHHFILVAIDYFTKWVEAASYTNVTKQVVAK 1949
              L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1719 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1777

Query: 1950 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEATNKN 2009
            F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE  N  
Sbjct: 1778 FF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1836

Query: 2010 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2064
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1837 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1896

Query: 2065 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAVARGQSYQARMKTAFDKKVHPREFKV 2124
             SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F V
Sbjct: 1897 ESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLV 1953

Query: 2125 GELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2184
            G+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1954 GDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 2011

Query: 2185 F 2185
            +
Sbjct: 2012 Y 2012



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 150 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMSNYKDNDSLMIHC 209
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M + 
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 210 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 268
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 269 REYAQRWRGAAARITPALDE 288
           R+Y +R+     +I+   D+
Sbjct: 532 RDYIRRFSEQRNKISDITDD 551


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.340    0.148    0.488 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,314,146,777
Number of Sequences: 2790947
Number of extensions: 135727096
Number of successful extensions: 540057
Number of sequences better than 10.0: 4411
Number of HSP's better than 10.0 without gapping: 3626
Number of HSP's successfully gapped in prelim test: 786
Number of HSP's that attempted gapping in prelim test: 526812
Number of HSP's gapped (non-prelim): 8210
length of query: 2185
length of database: 848,049,833
effective HSP length: 143
effective length of query: 2042
effective length of database: 448,944,412
effective search space: 916744489304
effective search space used: 916744489304
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 83 (36.6 bits)