BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148762.6 + phase: 0
(93 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8GW32 Hypothetical protein [Arabidopsis thaliana] 132 3e-30
UniRef100_Q9LJX1 DNA-binding protein-like [Arabidopsis thaliana] 120 6e-27
UniRef100_Q9FLE9 DNA-binding protein-like [Arabidopsis thaliana] 120 8e-27
UniRef100_Q8L919 DNA-binding protein-like [Arabidopsis thaliana] 118 3e-26
UniRef100_Q9LXG5 Hypothetical protein F8M21_50 [Arabidopsis thal... 118 3e-26
UniRef100_Q9CA64 Putative DNA-binding protein; 54988-54618 [Arab... 117 7e-26
UniRef100_Q9STU2 Hypothetical protein T23J7.40 [Arabidopsis thal... 93 1e-18
UniRef100_Q8LNC7 Hypothetical protein OSJNBa0044A10.22 [Oryza sa... 90 1e-17
UniRef100_Q6YUX0 DNA binding protein-like [Oryza sativa] 88 6e-17
UniRef100_Q9FSQ4 Putative DNA binding protein [Oryza sativa] 82 2e-15
UniRef100_Q9X6M7 M protein [Streptococcus pyogenes] 38 0.053
UniRef100_Q7ZVT3 Zgc:55668 [Brachydanio rerio] 37 0.15
UniRef100_Q7XKR7 OSJNBa0038P21.14 protein [Oryza sativa] 35 0.34
UniRef100_Q6ZCV8 BHLH transcription factor-like [Oryza sativa] 35 0.34
UniRef100_Q8GZV6 Hypothetical protein OJ1017C11.10 [Oryza sativa] 35 0.58
UniRef100_Q5VR96 Putative TA1 protein [Oryza sativa] 34 0.76
UniRef100_Q6JAH4 B1-2 [Sorghum bicolor] 34 0.99
UniRef100_Q67Y05 Putative bHLH transcription factor [Arabidopsis... 34 0.99
UniRef100_Q9SRT2 F21O3.5 protein [Arabidopsis thaliana] 34 0.99
UniRef100_UPI0000437ACE UPI0000437ACE UniRef100 entry 33 1.3
>UniRef100_Q8GW32 Hypothetical protein [Arabidopsis thaliana]
Length = 94
Score = 132 bits (331), Expect = 3e-30
Identities = 71/93 (76%), Positives = 80/93 (85%), Gaps = 1/93 (1%)
Query: 1 MSSRRS-RQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNL 59
MSSRRS R + GS+RISDDQI DLV KL+ L+PE+R RRSDKV ASKVLQETCNYIRNL
Sbjct: 1 MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60
Query: 60 QREVDDLSLRLSQLLATIDSDSAEASIIRSLLN 92
REVDDLS RLS+LLA+ D +SAEA+IIRSLLN
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLLN 93
>UniRef100_Q9LJX1 DNA-binding protein-like [Arabidopsis thaliana]
Length = 92
Score = 120 bits (302), Expect = 6e-27
Identities = 68/92 (73%), Positives = 76/92 (81%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRR-SDKVPASKVLQETCNYIRNL 59
MS+RRSRQ S S RISDDQ+IDLV KLRQ +PEI RR SDKV ASKVLQETCNYIR L
Sbjct: 1 MSNRRSRQTSNAS-RISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKL 59
Query: 60 QREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
REVD+LS RLSQLL ++D DS EA++IRSLL
Sbjct: 60 HREVDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91
>UniRef100_Q9FLE9 DNA-binding protein-like [Arabidopsis thaliana]
Length = 92
Score = 120 bits (301), Expect = 8e-27
Identities = 66/92 (71%), Positives = 78/92 (84%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEI-RNRRSDKVPASKVLQETCNYIRNL 59
MS+RRSRQ S + RISD+Q+IDLV KLRQ++PEI + RRSDK ASKVLQETCNYIRNL
Sbjct: 1 MSNRRSRQSSS-APRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL 59
Query: 60 QREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
REVD+LS RLSQLL ++D DS EA++IRSLL
Sbjct: 60 NREVDNLSERLSQLLESVDEDSPEAAVIRSLL 91
>UniRef100_Q8L919 DNA-binding protein-like [Arabidopsis thaliana]
Length = 92
Score = 118 bits (296), Expect = 3e-26
Identities = 67/92 (72%), Positives = 75/92 (80%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRR-SDKVPASKVLQETCNYIRNL 59
MS+RRSRQ S S RISDDQ+IDLV KLRQ +PEI RR SDKV AS VLQETCNYIR L
Sbjct: 1 MSNRRSRQTSNAS-RISDDQMIDLVSKLRQFLPEIHERRRSDKVSASXVLQETCNYIRKL 59
Query: 60 QREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
REVD+LS RLSQLL ++D DS EA++IRSLL
Sbjct: 60 HREVDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91
>UniRef100_Q9LXG5 Hypothetical protein F8M21_50 [Arabidopsis thaliana]
Length = 94
Score = 118 bits (296), Expect = 3e-26
Identities = 65/92 (70%), Positives = 77/92 (83%), Gaps = 2/92 (2%)
Query: 2 SSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIR-NRRSDKVPASKVLQETCNYIRNLQ 60
SSRRSRQ S S+RISDDQI DL+ KLRQ +PEIR NRRS+ V ASKVLQETCNYIRNL
Sbjct: 3 SSRRSRQASS-SSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLN 61
Query: 61 REVDDLSLRLSQLLATIDSDSAEASIIRSLLN 92
+E DDLS RL+QLL +ID +S +A++IRSL+N
Sbjct: 62 KEADDLSDRLTQLLESIDPNSPQAAVIRSLIN 93
>UniRef100_Q9CA64 Putative DNA-binding protein; 54988-54618 [Arabidopsis thaliana]
Length = 93
Score = 117 bits (293), Expect = 7e-26
Identities = 65/95 (68%), Positives = 83/95 (86%), Gaps = 4/95 (4%)
Query: 1 MSSRRSR-QQSGGSTRISDDQIIDLVCKLRQLVPEIRN-RRSDKVPASKVLQETCNYIRN 58
MS RRSR +QS G++RIS+DQI DL+ KL+QL+PE+R+ RRSDKV A++VLQ+TCNYIRN
Sbjct: 1 MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60
Query: 59 LQREVDDLSLRLSQLLATIDSDSAEASIIRSLLNQ 93
L REVDDLS RLS+LLA +SD+A+A++IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLA--NSDTAQAALIRSLLTQ 93
>UniRef100_Q9STU2 Hypothetical protein T23J7.40 [Arabidopsis thaliana]
Length = 78
Score = 93.2 bits (230), Expect = 1e-18
Identities = 52/79 (65%), Positives = 66/79 (82%), Gaps = 3/79 (3%)
Query: 16 ISDDQIIDLVCKLRQLVPEI-RNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
I+D+QI DLV +L +L+PE+ NRRS KV AS+VLQETC+YIRNL +EVDDLS RLSQLL
Sbjct: 2 ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLL 61
Query: 75 ATIDSDSAEASIIRSLLNQ 93
+ +DSA+A++IRSLL Q
Sbjct: 62 ES--TDSAQAALIRSLLMQ 78
>UniRef100_Q8LNC7 Hypothetical protein OSJNBa0044A10.22 [Oryza sativa]
Length = 88
Score = 90.1 bits (222), Expect = 1e-17
Identities = 50/93 (53%), Positives = 70/93 (74%), Gaps = 8/93 (8%)
Query: 1 MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRR--SDKVPASKVLQETCNYIRN 58
MS RR+ S RI+DD+I +L+ KL+ L+PE RR + + PA+K+L+E C+YI++
Sbjct: 1 MSGRRA------SGRITDDEINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYIKS 54
Query: 59 LQREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
L REVDDLS RLS+L+AT+DS+S +A IIRSLL
Sbjct: 55 LHREVDDLSERLSELMATMDSNSPQADIIRSLL 87
>UniRef100_Q6YUX0 DNA binding protein-like [Oryza sativa]
Length = 88
Score = 87.8 bits (216), Expect = 6e-17
Identities = 48/91 (52%), Positives = 66/91 (71%), Gaps = 5/91 (5%)
Query: 1 MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQ 60
MSSRRS + S IS+++I +L+ KL+ L+P R R S + +K+L+ETCNYI++L
Sbjct: 1 MSSRRSSRGS-----ISEEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLH 55
Query: 61 REVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
REVDDLS RLS L+AT+D +S A IIRS+L
Sbjct: 56 REVDDLSDRLSDLMATMDHNSPGAEIIRSIL 86
>UniRef100_Q9FSQ4 Putative DNA binding protein [Oryza sativa]
Length = 104
Score = 82.4 bits (202), Expect = 2e-15
Identities = 50/101 (49%), Positives = 70/101 (68%), Gaps = 11/101 (10%)
Query: 2 SSRRSRQQSGGS----------TRISDDQIIDLVCKLRQLVPEIRNRR-SDKVPASKVLQ 50
SSRRSR + GS T IS+DQI +L+ KL+ L+PE + R + + A++VLQ
Sbjct: 3 SSRRSRSRRAGSSVPSSSSSSRTSISEDQIAELLSKLQALLPESQARNGAHRGSAARVLQ 62
Query: 51 ETCNYIRNLQREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
ETC+YIR+L +EVD+LS L+QLLA+ D S +A++IRSLL
Sbjct: 63 ETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLL 103
>UniRef100_Q9X6M7 M protein [Streptococcus pyogenes]
Length = 270
Score = 38.1 bits (87), Expect = 0.053
Identities = 20/79 (25%), Positives = 38/79 (47%)
Query: 5 RSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVD 64
++ +QS + QI DLV K +L E+ D+ ++V++ + LQ ++D
Sbjct: 187 KAEEQSNEQLEFKNQQIADLVGKKAELEMELAKAEEDRATYNRVIEGAKRELTELQAKLD 246
Query: 65 DLSLRLSQLLATIDSDSAE 83
+ L+ A +D+ AE
Sbjct: 247 ETKQELANQQAQLDASKAE 265
>UniRef100_Q7ZVT3 Zgc:55668 [Brachydanio rerio]
Length = 627
Score = 36.6 bits (83), Expect = 0.15
Identities = 19/48 (39%), Positives = 29/48 (59%)
Query: 24 LVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLS 71
L L+ L+ +I+ + S VP K+LQET + ++ QRE+ D RLS
Sbjct: 394 LQADLKALLGKIKVKNSVTVPQEKILQETSDKLQRQQRELQDTQQRLS 441
>UniRef100_Q7XKR7 OSJNBa0038P21.14 protein [Oryza sativa]
Length = 262
Score = 35.4 bits (80), Expect = 0.34
Identities = 22/67 (32%), Positives = 42/67 (61%), Gaps = 4/67 (5%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R+ ++I + + L+ LVP N+ + K + +L E NY+++LQR+V+ LS++L+ +
Sbjct: 96 RVRRERISERMKLLQSLVPGC-NKITGK---ALMLDEIINYVQSLQRQVEFLSMKLATMN 151
Query: 75 ATIDSDS 81
+D DS
Sbjct: 152 PQLDFDS 158
>UniRef100_Q6ZCV8 BHLH transcription factor-like [Oryza sativa]
Length = 365
Score = 35.4 bits (80), Expect = 0.34
Identities = 26/78 (33%), Positives = 43/78 (54%), Gaps = 10/78 (12%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R+ ++I + + L+ LVP S + +L E NY+++LQR+V+ LS++LS +
Sbjct: 192 RLRREKISERMKLLQDLVPGC----SKVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVN 247
Query: 75 ATIDSDSAEASIIRSLLN 92
ID D I SL+N
Sbjct: 248 PRIDLD------IESLVN 259
>UniRef100_Q8GZV6 Hypothetical protein OJ1017C11.10 [Oryza sativa]
Length = 776
Score = 34.7 bits (78), Expect = 0.58
Identities = 22/66 (33%), Positives = 41/66 (61%), Gaps = 4/66 (6%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R ++I + + L+ LVP N+ + K + +L E NY+++LQR+V+ LS++LS +
Sbjct: 644 RFRREKINERMKLLQDLVPGC-NKITGK---AMMLDEIINYVQSLQRQVEFLSMKLSTIS 699
Query: 75 ATIDSD 80
++SD
Sbjct: 700 PELNSD 705
>UniRef100_Q5VR96 Putative TA1 protein [Oryza sativa]
Length = 437
Score = 34.3 bits (77), Expect = 0.76
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R+ ++I + + L+ LVP V +L E NY+++LQR+V+ LS++L+ +
Sbjct: 276 RVRREKISERMKYLQDLVPGCSKVTGKAV----MLDEIINYVQSLQRQVEFLSMKLASVN 331
Query: 75 ATID 78
T+D
Sbjct: 332 PTLD 335
>UniRef100_Q6JAH4 B1-2 [Sorghum bicolor]
Length = 585
Score = 33.9 bits (76), Expect = 0.99
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 13 STRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQ 72
S R ++I ++ L+ LVP I V + +L ET Y++ LQR V + L S+
Sbjct: 389 SERKRREKINEMFLILKSLVPSIHKAMKIHVDKASILTETIAYLKELQRRVQE--LESSR 446
Query: 73 LLATIDSDSAEASIIRSLLNQ 93
L T + + R + N+
Sbjct: 447 ELTTPSETTTRTTRPRGISNE 467
>UniRef100_Q67Y05 Putative bHLH transcription factor [Arabidopsis thaliana]
Length = 456
Score = 33.9 bits (76), Expect = 0.99
Identities = 21/64 (32%), Positives = 40/64 (61%), Gaps = 4/64 (6%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R+ ++I + + L+ LVP N+ + K + +L E NY+++LQR+V+ LS++LS +
Sbjct: 274 RVRREKISERMKLLQDLVPGC-NKVTGK---ALMLDEIINYVQSLQRQVEFLSMKLSSVN 329
Query: 75 ATID 78
+D
Sbjct: 330 TRLD 333
>UniRef100_Q9SRT2 F21O3.5 protein [Arabidopsis thaliana]
Length = 456
Score = 33.9 bits (76), Expect = 0.99
Identities = 21/64 (32%), Positives = 40/64 (61%), Gaps = 4/64 (6%)
Query: 15 RISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLSQLL 74
R+ ++I + + L+ LVP N+ + K + +L E NY+++LQR+V+ LS++LS +
Sbjct: 274 RVRREKISERMKLLQDLVPGC-NKVTGK---ALMLDEIINYVQSLQRQVEFLSMKLSSVN 329
Query: 75 ATID 78
+D
Sbjct: 330 TRLD 333
>UniRef100_UPI0000437ACE UPI0000437ACE UniRef100 entry
Length = 406
Score = 33.5 bits (75), Expect = 1.3
Identities = 18/48 (37%), Positives = 28/48 (57%)
Query: 24 LVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQREVDDLSLRLS 71
L L+ L+ +I+ + S V K+LQET + ++ QRE+ D RLS
Sbjct: 354 LQADLKALLGKIKVKNSVTVSQEKILQETSDKLQRQQRELQDTQQRLS 401
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.130 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,232,928
Number of Sequences: 2790947
Number of extensions: 3598729
Number of successful extensions: 15621
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 15515
Number of HSP's gapped (non-prelim): 139
length of query: 93
length of database: 848,049,833
effective HSP length: 69
effective length of query: 24
effective length of database: 655,474,490
effective search space: 15731387760
effective search space used: 15731387760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148762.6