BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148755.5 + phase: 0
(569 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa] 270 1e-70
UniRef100_Q8LMT3 Putative retroelement [Oryza sativa] 234 7e-60
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip... 196 1e-48
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip... 194 6e-48
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip... 194 8e-48
UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotra... 194 8e-48
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A... 186 1e-45
UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa] 184 5e-45
UniRef100_Q9XE45 Putative non-LTR retrolelement reverse transcri... 180 9e-44
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip... 178 3e-43
UniRef100_Q9SK98 Very similar to retrotransposon reverse transcr... 174 8e-42
UniRef100_Q9FYJ4 F17F8.5 [Arabidopsis thaliana] 173 1e-41
UniRef100_Q8LJX1 Putative reverse transcriptase [Sorghum bicolor] 173 1e-41
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 171 7e-41
UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis tha... 169 2e-40
UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa] 169 2e-40
UniRef100_O22220 Putative non-LTR retroelement reverse transcrip... 166 1e-39
UniRef100_Q9ZQG1 Putative non-LTR retroelement reverse transcrip... 166 2e-39
UniRef100_Q9SZ87 RNA-directed DNA polymerase-like protein [Arabi... 163 1e-38
UniRef100_Q9LDL8 Hypothetical protein AT4g08830 [Arabidopsis tha... 162 2e-38
>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
Length = 1026
Score = 270 bits (689), Expect = 1e-70
Identities = 175/531 (32%), Positives = 270/531 (49%), Gaps = 44/531 (8%)
Query: 15 GVGTRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNI 74
G+GT G+ +++ LQ+ADDT+ + + + ++ +L L E++SGLK+NFNKS V
Sbjct: 474 GLGTNGDNKIAILQYADDTIFLINDKLDHAKNLKYILCLFEQLSGLKINFNKSEVFCFGE 533
Query: 75 STSWLSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCF--WKPVLDRISARLSSWNNKYLS 132
+ + + CK G +P YLG+PI D++++ WK +++ +L W + S
Sbjct: 534 AKEKQDLYSNIFTCKVGSLPLKYLGIPI--DQKRILNKDWKLAENKMEHKLGCWQGRLQS 591
Query: 133 SGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVC 192
GGRLILL S LSS+P+Y +SF++ P G+ I+ K+ W + RK V W VC
Sbjct: 592 IGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGIRKYHLVNWPLVC 651
Query: 193 LPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY---GEIGGMVKEGGRH 249
P QGGLGV L N ++LGKW WR L ++ G W ++ A+Y + G+ + G
Sbjct: 652 SPRDQGGLGVLDLEAMNKAMLGKWIWR-LENEEGWWQEIIYAKYCSDKPLSGLRLKAG-- 708
Query: 250 SSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDL 309
SS +W+ + V+D F ++VGNG T FW D+WLG PL QF L+ +
Sbjct: 709 SSHFWQGVMEVKDD--------FFSFCTKIVGNGEKTLFWEDSWLGGKPLAIQFPSLYGI 760
Query: 310 AVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWL 369
+ K ++ D+ R G + +RR L + R+ VN + L +N +DK W
Sbjct: 761 VITKRITIADLNRKGID----CMKFRRDLHGDKLRDWRKIVNSWEGLNLVENCKDKLWWT 816
Query: 370 LDPILGYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVR 429
L +TV+ F ++ Q TS +W RVP K+ +F W ++++ T+ NL++
Sbjct: 817 LSKDGKFTVRS---FYRALKLQQTSFPNKKIWKFRVPLKIRIFIWFFTKNKILTKDNLLK 873
Query: 430 RYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQ-----GSVTQH 484
R + DN C C ETV HLF C +W ++ L + V GS Q
Sbjct: 874 R-GWRKGDNKC-QFCDKVETVQHLFFDCPLARLIWNIIACALNVKPVLSRQDLFGSWIQS 931
Query: 485 FIQFTNLAGMTRGSHDYLKIIWLACV-WAIWKERNN-CVFNNLASDPLSIV 533
+FT L I+ +A V W+IWK RN C L +DP+ +V
Sbjct: 932 MDKFTK----------NLVIVGIAAVLWSIWKCRNKACFERKLPNDPIELV 972
>UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]
Length = 764
Score = 234 bits (596), Expect = 7e-60
Identities = 171/539 (31%), Positives = 263/539 (48%), Gaps = 52/539 (9%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAA 83
L+HLQ+ADDT++ + N+ T++ +L E +SGLK+N+ KS + + A
Sbjct: 214 LTHLQYADDTILFMTNTEENIVTVKFLLYCYEAMSGLKINYQKSEIMVIGGDEMETQRVA 273
Query: 84 AVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSV 143
+ NC+ G +PF YLG+PI ++ ++I RL++W YLS GG+ IL+ S
Sbjct: 274 DLFNCQAGKMPFTYLGIPISMNKLTNADLDIPPNKIEKRLATWKCGYLSYGGKAILINSC 333
Query: 144 LSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGGLGVR 203
LSS+P+Y + + P G+ + ++SI + FW G E RK +KW+++C P GGLG
Sbjct: 334 LSSIPLYMMGVYLLPEGVHNKMDSIRARFFWEGLEKKRKYHMIKWEALCRPKEFGGLGFI 393
Query: 204 KLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY-GEIGGMVKEGGRHSSRWWRMICNVRD 262
+ N++LL KW +RL K +L+ +Y + GG + SS++W+ + V+
Sbjct: 394 DTRKMNIALLCKWIYRLESGKEDPCCVLLRNKYMKDGGGFFQSKAEESSQFWKGLHEVK- 452
Query: 263 GRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSVEDMVR 322
KW D VGNG+ T FW D W+G+ PLK Q+ ++ + +KE +V M
Sbjct: 453 -------KWMDLGSSYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADKEKTVSQMCL 505
Query: 323 AG-WEEGGGGWVWRRRLLAWEEEGVRECVNLLN---NIVLQDNIQDKWRWLLDPILGYTV 378
G W ++ RR L E + E +L N I L++ +D W L Y
Sbjct: 506 EGDW------YIELRRSLG--ERDLNEWNDLHNTPREIHLKEE-RDCIIWKLTKNGFYKA 556
Query: 379 KGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADN 438
K Y L+ G V V D+W +P KV + W +L+ R+ L ++ + N
Sbjct: 557 KTLYQALS--FGGVKDKVMQDLWRSSIPLKVKILFWLMLKGRIQAAGQL-KKMKWSGSPN 613
Query: 439 FCVGGCGIPETVDHLFIQCTSFGRVWYLVCH-----WLGIPCVFQGSVTQHFIQFTNLAG 493
+ CG E VDHL +C +W C+ W IP S + ++ N+
Sbjct: 614 CKL--CGQTEDVDHLMFRCHISQFMW--CCYRDAFGWDNIP-----SSREDLLEKLNI-- 662
Query: 494 MTRGSHDYLKIIWLACV----WAIWKERNNCVFN-NLASDPLSIVERVKLFSFLWLSSN 547
D K + LAC+ WAIW RN+ VFN L SDP + KLF F + N
Sbjct: 663 ----QKDGQKSVLLACLAAGTWAIWLMRNDWVFNGKLTSDPSHLPP--KLFLFFYSGDN 715
>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 196 bits (499), Expect = 1e-48
Identities = 153/544 (28%), Positives = 244/544 (44%), Gaps = 43/544 (7%)
Query: 20 GEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNISTSW 78
G ++HLQFADD+L + + N + ++ V + E SG K+N KSM+T G + S
Sbjct: 828 GAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGST 887
Query: 79 LSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLI 138
S+ +L YLGLP +K ++ ++DR+ R S+W+ ++LS G+ I
Sbjct: 888 QSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEI 947
Query: 139 LLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQG 198
+LKSV ++PVY +S FK P GI+S IES+ +W R I WV W + +G
Sbjct: 948 MLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEG 1007
Query: 199 GLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY-GEIGGMVKEGGRHSSRWWRMI 257
GLG R L +FN +LL K WRL+ N L+ RV+KARY ++ + + + S W
Sbjct: 1008 GLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGW--- 1064
Query: 258 CNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSV 317
++ DG LL R ++G+G+N DN + P + +N E +
Sbjct: 1065 ASLLDGIALL-----KKGTRHLIGDGQNIRIGLDNIVDSHPPR---------PLNTEETY 1110
Query: 318 EDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVN-----LLNNIVL-QDNIQDKWRWLLD 371
++M E G + + W++ + + V+ ++ I L + DK W +
Sbjct: 1111 KEMTINNLFERKGSYYF------WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1164
Query: 372 PILGYTVKGTYCFLTNMEGQVTSGVG---------FDVWHRRVPSKVSLFAWRLLQDRVA 422
YTV+ Y LT+ + +W+ + K+ F WR L +A
Sbjct: 1165 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALA 1224
Query: 423 TRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVT 482
T L R + D C E+++H C W+L L +
Sbjct: 1225 TTERLTTRGM--RIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIRNQLMSNDFE 1282
Query: 483 QHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFL 542
++ N T S D+ K++ + +W IWK RNN VFN P V K +
Sbjct: 1283 ENISNILNFVQDTTMS-DFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHD 1341
Query: 543 WLSS 546
WL++
Sbjct: 1342 WLNA 1345
>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1344
Score = 194 bits (493), Expect = 6e-48
Identities = 154/550 (28%), Positives = 250/550 (45%), Gaps = 58/550 (10%)
Query: 21 EVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNISTS-- 77
+V ++HL FADDTL++ + + + L ++SG +N NKS +T G N+
Sbjct: 651 KVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIK 710
Query: 78 -WLSEAAAV-LNCKTGLIPFMYLGLP--IGGDERKLCFWKPVLDRISARLSSWNNKYLSS 133
W+ + + L TG YLGLP + G +R L + + +++ +RL+ W K LS
Sbjct: 711 DWIKSRSGISLEGGTG----KYLGLPECLSGSKRDLFGF--IKEKLQSRLTGWYAKTLSQ 764
Query: 134 GGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCL 193
GG+ +LLKS+ +LPVY +S FK P + + ++ +W + RKI W+ W + L
Sbjct: 765 GGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTL 824
Query: 194 PMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVK--EGGRHSS 251
P QGG G + L FN +LL K WR+L +K L+ RV ++RY + G R S
Sbjct: 825 PKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSY 884
Query: 252 RWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAV 311
W ++ GR LL+ +R V+GNG+ TF W D WL D + +R + V
Sbjct: 885 AWRSILF----GRELLM-----QGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINV 935
Query: 312 N-KECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDN----IQDKW 366
+ K + D W R L W++ I+L+ +D +
Sbjct: 936 DLKVSQLIDPTSRNWNLN-----MLRDLFPWKDV----------EIILKQRPLFFKEDSF 980
Query: 367 RWLLDPILGYTVKGTYCFLTN-------MEGQVTSGVG--FD-VWHRRVPSKVSLFAWRL 416
WL Y+VK Y FL+ E +V V FD +W+ K+ +F W+
Sbjct: 981 CWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKA 1040
Query: 417 LQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCV 476
L + L R + +D+ C+ ET++H+ +C +VW + H
Sbjct: 1041 LHGAIPVEDRLRTRGI--RSDDGCLMCDTENETINHILFECPLARQVW-AITHLSSAGSE 1097
Query: 477 FQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERV 536
F SV + + +L H +L+ + +W +WK RN +F S ++V++
Sbjct: 1098 FSNSVYTNMSRLIDLTQQNDLPH-HLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKA 1156
Query: 537 KLFSFLWLSS 546
W S+
Sbjct: 1157 YEAYHEWFSA 1166
>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 194 bits (492), Expect = 8e-48
Identities = 153/544 (28%), Positives = 242/544 (44%), Gaps = 43/544 (7%)
Query: 20 GEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNISTSW 78
G ++HLQFADD+L + + N + ++ V + E SG K+N KSM+T G + S
Sbjct: 1054 GAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGST 1113
Query: 79 LSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLI 138
S +L YLGLP +K ++ ++DR+ R S+W+ ++LS G+ I
Sbjct: 1114 QSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEI 1173
Query: 139 LLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQG 198
+LKSV ++PVY +S FK P GI+S IES+ +W R I WV W + +G
Sbjct: 1174 MLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEG 1233
Query: 199 GLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY-GEIGGMVKEGGRHSSRWWRMI 257
GLG R L +FN +LL K WRL+ N L+ RV+KARY ++ + + + S W
Sbjct: 1234 GLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGW--- 1290
Query: 258 CNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSV 317
++ DG LL R ++G+G+N DN + P + +N E +
Sbjct: 1291 ASLLDGIALL-----KKGTRHLIGDGQNIRIGLDNIVDSHPPR---------PLNTEETY 1336
Query: 318 EDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVN-----LLNNIVL-QDNIQDKWRWLLD 371
++M E G + + W++ + + V+ ++ I L + DK W +
Sbjct: 1337 KEMTINNLFERKGSYYF------WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1390
Query: 372 PILGYTVKGTYCFLTNMEGQVTSGVG---------FDVWHRRVPSKVSLFAWRLLQDRVA 422
YTV+ Y LT+ + +W+ + K+ F WR L +A
Sbjct: 1391 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALA 1450
Query: 423 TRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVT 482
T L R + D C E+++H C W L L +
Sbjct: 1451 TTERLTTRGM--RIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFE 1508
Query: 483 QHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFL 542
++ N T S D+ K++ + +W IWK RNN VFN P V K +
Sbjct: 1509 ENISNILNFVQDTTMS-DFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHD 1567
Query: 543 WLSS 546
WL++
Sbjct: 1568 WLNA 1571
>UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotransposon Karma DNA,
complete sequence [Oryza sativa]
Length = 1197
Score = 194 bits (492), Expect = 8e-48
Identities = 153/548 (27%), Positives = 246/548 (43%), Gaps = 64/548 (11%)
Query: 27 LQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAAAVL 86
+Q+ADDTL+I +V +R+ LL K +GL++NF KS + ++I S S + +L
Sbjct: 684 IQYADDTLVICRAEEDDVLALRSTLLQFSKATGLQINFAKSTMISLHIDRSKESSLSELL 743
Query: 87 NCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSVLSS 146
CK +P YLGLP+ + +P++ ++ + L+ W LS RLIL+ +VLSS
Sbjct: 744 QCKLESLPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQAERLILVNAVLSS 803
Query: 147 LPVYFLSFFKAPTGIISSIESIFKKKFWGGCEV-SRKIAWVKWDSVCLPMSQGGLGVRKL 205
+PVY +S FK P +I +I+ + FW G + S V WD VC +GGLG++ L
Sbjct: 804 VPVYAMSAFKLPPKVIEAIDKRRRAFFWTGDDTCSGAKCLVAWDEVCTAKEKGGLGIKSL 863
Query: 206 GEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKEGGRHSSRWWRMICNVRDGRG 265
N +LL K + L D +S W I DGR
Sbjct: 864 KTQNEALLLKRLFNLFSD--------------------------NSSWTNWIWKEFDGRS 897
Query: 266 LLVG-----KW--FDDNIRRV-------VGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAV 311
LL W F + + +G+G T FW+D W G++ L QF LF +
Sbjct: 898 LLKSLPLGQHWSVFQKLLPELFKITTVHIGDGSRTSFWHDRWTGNMTLAAQFESLFSHST 957
Query: 312 NKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLD 371
+ +VE ++ G + + RL + + ++E +L N L + + L+
Sbjct: 958 DDLATVEQILSFGIYD-----ILTPRLSSAAQNDLQELQTILQNFSLTNESDTR----LN 1008
Query: 372 PILGYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRY 431
LG T L + G + F +W R+P K+ LFAW L++DR++T+ NL+++
Sbjct: 1009 NRLGNLTTKTIYDLRSPPGFPSPNWKF-IWDCRMPLKIKLFAWLLVRDRLSTKLNLLKKK 1067
Query: 432 VLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNL 491
++Q A C ET DHL C + + W + + T++ Q
Sbjct: 1068 IVQTAT--CDICSTTDETADHLSFNCP------FAISFWQALHIQPIINETKYLSQLKAP 1119
Query: 492 AGM-TRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVAS 550
A + TR + + ++ C W +W R++ VF S ++R S LW +
Sbjct: 1120 ATIPTR----HFQSFFMLCFWVLWNHRHDVVFRGRPPSIASCLQRGISESSLWAETFTPD 1175
Query: 551 FPFGFHDW 558
F W
Sbjct: 1176 DRFVIDVW 1183
>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 186 bits (473), Expect = 1e-45
Identities = 152/523 (29%), Positives = 243/523 (46%), Gaps = 41/523 (7%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNISTSWLSEA 82
+SHL FADD+L + + I +L E VSG ++NF+KS + G + S ++
Sbjct: 460 VSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADI 519
Query: 83 AAVLNCKTGLIPFMYLGLP--IGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILL 140
+L YLGLP +GG + K+ + V DR+ +R++ W+ K+LS GG+ +++
Sbjct: 520 KLILGIHNLGGMGSYLGLPESLGGSKTKVFSF--VRDRLQSRINGWSAKFLSKGGKEVMI 577
Query: 141 KSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGGL 200
KSV ++LP Y +S F+ P I S + S K +W SR + W+ WD +C S GGL
Sbjct: 578 KSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGL 637
Query: 201 GVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKEGGRHS-SRWWRMICN 259
G R + +FN +LL K WRL+ + L+ +V K RY + +S S WR + +
Sbjct: 638 GFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMIS 697
Query: 260 VRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKF-QFSRLFDLAVNKECSVE 318
R LV K + + VG+G + W D W +P +F + ++ V+ V+
Sbjct: 698 ARS----LVYK----GLIKRVGSGASISVWNDPW---IPAQFPRPAKYGGSIVDPSLKVK 746
Query: 319 DMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVL-QDNIQDKWRWLLDPILGYT 377
++ + W LL +E E V L++ + + N++D W YT
Sbjct: 747 SLIDSRSN------FWNIDLL--KELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYT 798
Query: 378 VKGTYCFLTNMEGQVTSGVGFD-------VWHRRVPSKVSLFAWRLLQDRVATRTNLVRR 430
VK Y + T+ +G D +W + P K+ F W++L V NL +R
Sbjct: 799 VKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKR 858
Query: 431 YVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTN 490
+L D CV E+++H QC ++W L P +F + F +
Sbjct: 859 GIL--CDKGCVSCGASEESINHTLFQCHPARQIWAL-SQIPTAPGIFPSN--SIFTNLDH 913
Query: 491 LAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIV 533
L D W+ +W IWK RN VF N+ DP+ I+
Sbjct: 914 LFWRIPSGVDSAPYPWI--IWYIWKARNEKVFENVDKDPMEIL 954
>UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]
Length = 593
Score = 184 bits (468), Expect = 5e-45
Identities = 141/454 (31%), Positives = 213/454 (46%), Gaps = 38/454 (8%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAA 83
LS LQ+ADDT++ E + + ++ VL E++SGLK+NF+KS + + E A
Sbjct: 127 LSILQYADDTILFMEHDLEDAKNLKLVLSAFERLSGLKINFHKSELLCFGKAIEVEREYA 186
Query: 84 AVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSV 143
+ CKTG YLGLP+ + WK V +R RL SW K LS GGRL+L+ SV
Sbjct: 187 LLFGCKTGSYTLKYLGLPMHYRKLSNKDWKEVEERFQKRLGSWKGKLLSVGGRLVLINSV 246
Query: 144 LSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGGLGVR 203
LSSL +Y LSFF+ P GII ++ + FW E +K +W +C P GGLG++
Sbjct: 247 LSSLAMYMLSFFEVPKGIIKKLDYYRSRFFWQSDEHKKKYRLARWSVLCKPKECGGLGIQ 306
Query: 204 KLGEFNLSL---LGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKEGGRHSSRWWRMICNV 260
L N L L K W+ L+ K L + + M + R S +W + V
Sbjct: 307 NLEVQNKCLLRGLAKLVWQNLLRKKYLAKKTI---------MQVQKQRGDSHFWTGLMGV 357
Query: 261 RDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSVEDM 320
+D F + +G FW D WLG+ L+ + L++L NK V +
Sbjct: 358 KD--------TFSSFGSFKLQDGLQIRFWEDCWLGNQSLEKIYPSLYNLVRNKNVVVAKV 409
Query: 321 VRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGYTVKG 380
+ E +RR ++ + E V + +I L+ +D++ W +TV
Sbjct: 410 L----ERVPLNVSFRRAIIGDNLKAWHEIVANVVDINLRGQ-KDRFTWDASKNGTFTVNS 464
Query: 381 TYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFC 440
Y L M G V F +W R+P K+ +F W L + + T+ NL +R + + C
Sbjct: 465 MYKKL--MFGNVIPRQSF-IWKLRLPLKIKIFLWYLKEGVILTKDNLAKRR-WKGSLRCC 520
Query: 441 VGGCGIPETVDHLFIQC-------TSFGRVWYLV 467
C ET+ +LF C T + R+W L+
Sbjct: 521 F--CRSHETIQYLFFDCPMVIFRGTHWARLWSLL 552
>UniRef100_Q9XE45 Putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 180 bits (457), Expect = 9e-44
Identities = 128/464 (27%), Positives = 211/464 (44%), Gaps = 45/464 (9%)
Query: 18 TRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTS 77
++G +LSH+ FADD ++ E S +R IR VL SG KV+ KS + S +
Sbjct: 195 SQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIF---FSEN 251
Query: 78 WLSEAAAVLNCKTGLIPFM----YLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSS 133
+ +++ ++G+ YLG+P+ + +L++++ RL+ W ++LS
Sbjct: 252 VSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSL 311
Query: 134 GGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCL 193
GR+ L K+VLSS+PV+ +S P + ++ + + WG RK + W VC
Sbjct: 312 AGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCK 371
Query: 194 PMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYG----EIGGMVKEGGRH 249
P S+GGLG+RK + N +LL K WRL+ D + LW R+++ Y G K
Sbjct: 372 PRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYRVQDVRDGAWTKVRSVC 431
Query: 250 SSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDL 309
SS W + +R+ +++ + V+G+GR FW D WL ++PL +L
Sbjct: 432 SSTWRSVALGMRE---VVI-----PGLSWVIGDGREILFWMDKWLTNIPLA-------EL 476
Query: 310 AVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNI------- 362
V + AGW +G RR + W+ + ++ N + LQ +
Sbjct: 477 LVQEP-------PAGW-KGMRARDLRRNGIGWDMATIAPYISSYNRLQLQSFVLDDITGA 528
Query: 363 QDKWRWLLDPILGYTVKGTYCFLTNMEGQVTSGVGF--DVWHRRVPSKVSLFAWRLLQDR 420
+D+ W + V TY FLT E F VW P +V LF W + Q
Sbjct: 529 RDRISWGESQDGRFKVSTTYSFLTRDEAPRQDMKRFFDRVWSVTAPERVRLFLWLVAQQA 588
Query: 421 VATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVW 464
+ T RR++ + C G E++ H+ C + +W
Sbjct: 589 IMTNQERHRRHL--STTTICQVCKGAKESIIHVLRDCPAMEGIW 630
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 178 bits (452), Expect = 3e-43
Identities = 153/537 (28%), Positives = 240/537 (44%), Gaps = 48/537 (8%)
Query: 1 MMKTSVLSNLFQPYGVGTRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGL 60
+++ SV ++P V G +LSH+ FADD ++ E S +R IR VL + SG
Sbjct: 517 LIEASVGKREWKPIAVSCGGS-KLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQ 575
Query: 61 KVNFNKSMVT---GVNISTSWLSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLD 117
KV+ KS + V+ L + + C L YLG+PI + VL+
Sbjct: 576 KVSLEKSKIFFSHNVSREMEQLISEESGIGCTKEL--GKYLGMPILQKRMNKETFGEVLE 633
Query: 118 RISARLSSWNNKYLSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGC 177
R+SARL+ W + LS GR+ L K+VLSS+PV+ +S P + +++ + WG
Sbjct: 634 RVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGST 693
Query: 178 EVSRKIAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYG 237
+K + W +C P ++GG+G+R + N +L+ K WRLL DK LW RV++ +Y
Sbjct: 694 MEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY- 752
Query: 238 EIGGM-----VKEGGRHSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDN 292
++GG+ +K R SS W + +R+ VG W V G+G FW D
Sbjct: 753 KVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVG-W-------VPGDGCTIRFWLDR 804
Query: 293 WLGDVPLKFQFSRLFDLAVNKECSVEDM-VRAGWEEGGGGWVWRRRLLAWEEEGVRECVN 351
WL P L +L + E + V A + G GW L E R ++
Sbjct: 805 WLLQEP-------LVELGTDMIPEGERIKVAADYWLPGSGWNLEILGLYLPETVKRRLLS 857
Query: 352 LLNNIVLQDNIQDKWRWLLDPILGYTVKGTYCFLTNMEGQVTSGVGF--DVWHRRVPSKV 409
++ + L + + W+ D +TV+ Y L G + F +W P +V
Sbjct: 858 VVVQVFLGNGDEISWKGTQDG--AFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERV 915
Query: 410 SLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCH 469
+F W + Q+ + T VRR++ + A C G ET+ H+ C + +W +
Sbjct: 916 RVFIWLVSQNVIMTNVERVRRHLSENA--ICSVCNGAEETILHVLRDCPAMEPIWRRLLP 973
Query: 470 WLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLAC----VWAIWKERNNCVF 522
F S+ + FTN+ D +K IW +W WK R VF
Sbjct: 974 LRRHHEFFSQSLLEWL--FTNM--------DPVKGIWPTLFGMGIWWAWKWRCCDVF 1020
>UniRef100_Q9SK98 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 174 bits (440), Expect = 8e-42
Identities = 153/547 (27%), Positives = 243/547 (43%), Gaps = 53/547 (9%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNISTSWLSEA 82
+ HL FADD+L I + + V ++++L +G +N KS +T G + T +E
Sbjct: 524 IHHLLFADDSLFICKANKDEVVVLQSILGAYGAATGQIINLAKSSITFGSKVETVKKAEI 583
Query: 83 AAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKS 142
L YLGLP K+ + R+ ++LSSW +K LS GG+ I+LK+
Sbjct: 584 QTCLGIFKEGDASTYLGLPECFSGSKIEMLDYIKVRLKSKLSSWFSKSLSQGGKEIMLKA 643
Query: 143 VLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGGLGV 202
V ++PV+ +S FK P +++ S +W + RKI W+ W+ +CLP GGLG
Sbjct: 644 VAMAMPVFAMSCFKLPKTTCTNLASAMADFWWSANDHQRKIHWLSWEKLCLPKEHGGLGF 703
Query: 203 RKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMV-KEGGRHSSRWWRMICNVR 261
R +G FN +LL K WRLL + L+ R++K+RY +G + + G S WR I + R
Sbjct: 704 RDIGLFNQALLAKQAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGR 763
Query: 262 D--GRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSVED 319
D RGL+ + VGNG++ W D WL D L+ + + + +N + V D
Sbjct: 764 DLLCRGLV----------KRVGNGKSIRVWIDYWLDDNGLRAPWIK--NPIINVDLLVSD 811
Query: 320 MV---RAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGY 376
++ + W RL EE+ + V + ++ D W W + Y
Sbjct: 812 LIDYEKRDW-----------RLDKLEEQFFPDDVVKIRENRPVVSLDDFWIWKHNKSGDY 860
Query: 377 TVKGTYCFLTNME-GQVT---------SGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTN 426
+VK Y +N GQV + + VW + K+ +F W++L +
Sbjct: 861 SVKLGYWLASNQNLGQVAIEAMMQPSLNDLKTQVWKLQTEPKIKVFLWKVLSGAIPVVDL 920
Query: 427 LVRRYVLQAADNFCVGGCGIP-ETVDHLFIQCTSFGRVWYLV---CHWLGIPCVFQGSVT 482
L Y D+ C CG E++ H+ C+ +VW + LG C GSV
Sbjct: 921 L--SYRGMKLDSRC-QTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFEC---GSVY 974
Query: 483 QHFIQF-TNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSF 541
+ F N + W+ +W IWK RN F L + +V+
Sbjct: 975 ANLYHFLINRDNLKWPVELRRSFPWI--IWRIWKNRNLFFFEGKRFTVLETILKVRKDVE 1032
Query: 542 LWLSSNV 548
W ++ V
Sbjct: 1033 DWFAAQV 1039
>UniRef100_Q9FYJ4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 173 bits (439), Expect = 1e-41
Identities = 141/529 (26%), Positives = 226/529 (42%), Gaps = 54/529 (10%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAA 83
L+HL FADD +++ + ++ I V K SGL+++ KS + +S E A
Sbjct: 345 LTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIA 404
Query: 84 AVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSV 143
A G +P YLGLP+ + P+L++I R+++W ++ S GR L+KSV
Sbjct: 405 AKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSV 464
Query: 144 LSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGGLGVR 203
L S+ ++L+ F+ P I I+ + W G E+S A + WD VC P ++GGLG+R
Sbjct: 465 LWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLR 524
Query: 204 KLGEFNLSLLGKWCWRLLVDKNGLW------YRVLKARYGEIGGMVKEGGRHSSRWWRMI 257
L E N K WR++ + N LW Y + K + K+ S WR I
Sbjct: 525 NLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSL----KQSTSMGSWIWRKI 580
Query: 258 CNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWL--GDVPLKFQFSRLFDLAVNKEC 315
+RD V K F R VGNG + FWYD+W G + DL + +E
Sbjct: 581 LKIRD-----VAKSFS---RVEVGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREA 632
Query: 316 SVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNI--------VLQDNIQDK-- 365
SV D W RR R +LLN I + + +D
Sbjct: 633 SVAD-------------AWTRR------SRRRHRTSLLNEIEEMMAYQRIHHSDAEDTVL 673
Query: 366 WRWLLDPIL-GYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATR 424
WR D ++ + T+ + V+ G VW R K +L W + +R+ T
Sbjct: 674 WRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKG--VWFRHATPKYALCTWLAIHNRLPTG 731
Query: 425 TNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQH 484
+++ + CV +T++HLF C+ VW + GI + H
Sbjct: 732 DRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAK--GIWKTRYSTRWSH 789
Query: 485 FIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIV 533
+ + R + I+ A ++ +W+ERN + + P +++
Sbjct: 790 LLTHISTHFQDRVEGFLTRYIFQATIYHVWRERNGRRHDAAPNTPATVI 838
>UniRef100_Q8LJX1 Putative reverse transcriptase [Sorghum bicolor]
Length = 1998
Score = 173 bits (438), Expect = 1e-41
Identities = 140/510 (27%), Positives = 232/510 (45%), Gaps = 50/510 (9%)
Query: 27 LQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAAAVL 86
+Q+ADDTLII E + +++++ + +GLKVN KSM+ +N+ L A
Sbjct: 1490 IQYADDTLIIAEGDTRQLLILKSIINTFSEATGLKVNLQKSMMLPINMDEERLDTLARTF 1549
Query: 87 NCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSVLSS 146
C G PF YLGLP+G + + ++P++++ ARL S +LS GRL L +V ++
Sbjct: 1550 GCSKGSFPFTYLGLPLGITKPTIQDYQPLINKCEARLGSVAT-FLSEAGRLELTNAVFTA 1608
Query: 147 LPVYFLSFFKAPTGIISSIESIFKKKFWGGCEV-SRKIAWVKWDSVCLPMSQGGLGVRKL 205
LP +++ P +I I+ K W G + +RK W VC P ++GGLGV +
Sbjct: 1609 LPTFYMCTLAIPKSVIHKIDKFRKHCLWRGNGINARKPPKAAWKLVCKPKNEGGLGVIDI 1668
Query: 206 GEFNLSLLGKWCWRLLVDKNGLWYRVLKARY---GEIGGMVKEGGRHSSRWWRMICNVRD 262
+ N +LL K + K+ W +++ ++ G++ G +++G S WWR I + D
Sbjct: 1669 EKQNEALLMKNLDKFFNKKDTPWVQMIWDKHYAKGKLPGQIRKG----SFWWRDILKLLD 1724
Query: 263 GRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKECSVEDMVR 322
+ + ++ ++ G G + FW D W G L+ + LF +K S +++
Sbjct: 1725 -------PYKEMSLIQMKG-GESIVFWQDKW-GMQKLRLEMPELFSFVQHKFLSAAEVL- 1774
Query: 323 AGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNI-----QDKWRWLLDPILGYT 377
G E+ R L E + L I DN+ QD+W++ G
Sbjct: 1775 -GQED-----FTRLLQLPISETAFHQLQQLTTRI---DNLERTQEQDQWKYK----WGNN 1821
Query: 378 VKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAAD 437
T + M Q V +W K +F W L++DR++T N+++R +Q
Sbjct: 1822 FSATKAYSELMGHQQIHEVHKWIWKSFCQPKHKVFFWLLIKDRLST-CNILKRKNMQLQS 1880
Query: 438 NFCVGGC--GIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMT 495
CV C ET HLF+ C + W L+ + F +T HF N
Sbjct: 1881 YNCV-LCLQNSEETTSHLFLHCAYARQCWQLLDMDIPPNSDFP-EITDHFKHGFN----- 1933
Query: 496 RGSHDYLKIIWLACVWAIWKERNNCVFNNL 525
+ + + + WAIW RNN +F +
Sbjct: 1934 ---NQFFMVTTILLCWAIWSTRNNLIFRGI 1960
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 171 bits (432), Expect = 7e-41
Identities = 145/535 (27%), Positives = 241/535 (44%), Gaps = 63/535 (11%)
Query: 19 RGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEK---VSGLKVNFNKSMVT-GVNI 74
RG +SHL FADD++ + +N + ++ ++E+ SG +VN+ KS + G +I
Sbjct: 671 RGAPPISHLLFADDSMFYCK---VNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHI 727
Query: 75 STSWLSEAAAVLNCKTGLI----PFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKY 130
S E ++ K G+ +YLGLP K+ + DR+ ++ W + +
Sbjct: 728 S----EERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNF 783
Query: 131 LSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDS 190
LS GG+ ILLK+V +LP Y +S FK P I IES+ + +W + R + W W
Sbjct: 784 LSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCH 843
Query: 191 VCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKE--GGR 248
+ P + GGLG +++ FN++LLGK WR++ +K+ L +V K+RY + G R
Sbjct: 844 LSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSR 903
Query: 249 HSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKF-----QF 303
S W ++ + + L+ IR V+GNG W D W+G P K +
Sbjct: 904 PSFAW----KSIYEAQVLI-----KQGIRAVIGNGETINVWTDPWIGAKPAKAAQAVKRS 954
Query: 304 SRLFDLAVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQ 363
+ A N V+D++ G W W L + + N+L +
Sbjct: 955 HLVSQYAANSIHVVKDLLL----PDGRDWNWNLVSLLFPDNTQE---NILALRPGGKETR 1007
Query: 364 DKWRWLLDPILGYTVKGTYCFLTNMEGQVTS----------GVGFDVWHRRVPSKVSLFA 413
D++ W Y+VK Y +T + Q + + +W VP K+ F
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFL 1067
Query: 414 WRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGI 473
WR + + ++ +NL R++ A + CV ETV+HL +C F R+ + +
Sbjct: 1068 WRCVNNCLSVASNLAYRHL--AREKSCVRCPSHGETVNHLLFKC-PFARLTWAISPLPAP 1124
Query: 474 P------CVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVF 522
P +F+ H + + + H L I W+ +W +WK RN+ VF
Sbjct: 1125 PGGEWAESLFR---NMHHVLSVHKSQPEESDHHAL-IPWI--LWRLWKNRNDLVF 1173
>UniRef100_Q9M1N9 Hypothetical protein T18B22.50 [Arabidopsis thaliana]
Length = 762
Score = 169 bits (429), Expect = 2e-40
Identities = 135/473 (28%), Positives = 211/473 (44%), Gaps = 41/473 (8%)
Query: 6 VLSNLFQPY-GVGTRG------EVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVS 58
VLS L G+G G + L+HL FADD +I+ + ++ I V L K S
Sbjct: 226 VLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWS 285
Query: 59 GLKVNFNKSMVTGVNISTSWLSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDR 118
GLK++ KS + +S++ ++ + G +P YLGLP+ + P++++
Sbjct: 286 GLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQ 345
Query: 119 ISARLSSWNNKYLSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCE 178
I R+ SW++++LS GR L+ S++ S ++LS F+ P I IE + W G
Sbjct: 346 IRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTN 405
Query: 179 VSRKIAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARY-- 236
++ K A + W+ VC P S+GGLG+R L E N K WR++ + LW + ++
Sbjct: 406 LNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLK 465
Query: 237 GEIGGMVKEGGRHSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNW--L 294
EI +VKE S W+ I R V K F + VGNG +T FW+D+W L
Sbjct: 466 REIFWIVKENANLGSWIWKKILKYRG-----VAKRF---CKAEVGNGESTSFWFDDWSLL 517
Query: 295 GDVPLKFQFSRLFDLAVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEE--EGVRECVNL 352
G + D+ +++ SV D W RRR +E + E ++
Sbjct: 518 GRLIDVAGIRGTIDMGISRTMSVAD-----------AWTSRRRRHHRQEILNTIEEVLST 566
Query: 353 LNNIVLQDNIQDKWRWLLDPIL---GYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKV 409
+ Q Q + W + ++ K T+ +L +V G VW K
Sbjct: 567 QHQKRTQQQQQGRVLWKGKNDIYKDKFSTKNTWNYLRTTSNEVAWHKG--VWFPHATPKY 624
Query: 410 SLFAWRLLQDRVATRTNLVRRYVLQAAD-NFCVGGCGIPETVDHLFIQCTSFG 461
S W DR+AT +++ + D FC G ET DHLF G
Sbjct: 625 SFCLWLAAHDRLATGARMIKWNRGETGDCTFCRQGI---ETRDHLFFMQLHIG 674
>UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]
Length = 1509
Score = 169 bits (429), Expect = 2e-40
Identities = 144/520 (27%), Positives = 230/520 (43%), Gaps = 51/520 (9%)
Query: 19 RGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSW 78
+G +SHL FADD+LI+ + + ++ +L + E+ SG +N +KS V + +TS
Sbjct: 872 QGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM-FSPNTSS 930
Query: 79 LSEAA--AVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGR 136
L + A A LN + YLGLP+ + + + +RI R+ W K LS G+
Sbjct: 931 LEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGK 990
Query: 137 LILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMS 196
IL+K+V +P + + F+ + I + K +W E K+ W+ W+ + LP +
Sbjct: 991 EILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKN 1050
Query: 197 QGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVK-EGGRHSSRWWR 255
GGLG R + FNL++L K WRL+ D + L RVL+A+Y +G + + + S WR
Sbjct: 1051 MGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWR 1110
Query: 256 MICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAVNKEC 315
I +GL V + + VG+G W D W +P + + N
Sbjct: 1111 SI-----QKGLRV---LQNGMIWRVGDGSKINIWADPW---IPRGWSRKPMTPRGANLVT 1159
Query: 316 SVEDMVRAGWEEGGGGWVWRRRLLA---WEEEGVRECVNLLNNIVLQDNIQDKWRWLLDP 372
VE+++ + G W LL+ WEE+ V + +I + ++D W D
Sbjct: 1160 KVEELI----DPYTG--TWDEDLLSQTFWEED-----VAAIKSIPVHVEMEDVLAWHFDA 1208
Query: 373 ILGYTVKGTYCFLTNMEGQVTS----GV-----GFD-----VWHRRVPSKVSLFAWRLLQ 418
+TVK Y ME + + GV G D +W VP K+ F WR+
Sbjct: 1209 RGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCH 1268
Query: 419 DRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQ 478
+ +A R NL R + D CV E HLF +C +VW +
Sbjct: 1269 NTLALRANLHHRGM--DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ------ALNLEEL 1320
Query: 479 GSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERN 518
S+ + N+ + + + C+W WKERN
Sbjct: 1321 RSMLEQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERN 1360
>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 166 bits (421), Expect = 1e-39
Identities = 147/547 (26%), Positives = 235/547 (42%), Gaps = 56/547 (10%)
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT---GVNISTS-WL 79
++HL FADDTL+I + S L I L +SG +N KS +T VN T W+
Sbjct: 405 VNHLLFADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKSAITFGAKVNEETKQWI 464
Query: 80 SEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLIL 139
+ + +T YLGLP K + + +++ +RLS W K LS GG+ IL
Sbjct: 465 MNRSGI---QTEGGTGKYLGLPECFQGSKQVLFGFIKEKLQSRLSGWYAKTLSQGGKDIL 521
Query: 140 LKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQGG 199
LKS+ + PVY ++ F+ + + + S+ +W + +KI W+ + LP GG
Sbjct: 522 LKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKKIHWIGAQKLMLPKFLGG 581
Query: 200 LGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVK--EGGRHSSRWWRMI 257
G + L FN +LL K RL D + L ++LK+RY + +G R S W ++
Sbjct: 582 FGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDFLSATKGTRPSYAWQSIL 641
Query: 258 CNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWL-GDVPLKFQFSRLFDLAVNKECS 316
GR LLV +++++GNG NT+ W DNW+ D P + + ++ K
Sbjct: 642 Y----GRELLV-----SGLKKIIGNGENTYVWMDNWIFDDKPRRPESLQIMVDIQLKVSQ 692
Query: 317 VEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGY 376
+ D W R L W+E + ++ + QD + W Y
Sbjct: 693 LIDPFSRNWNLN-----MLRDLFPWKE------IQIICQQRPMASRQDSFCWFGTNHGLY 741
Query: 377 TVKGTY----------CFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTN 426
TVK Y F E + + +W+ K+ +F W++L+ VA
Sbjct: 742 TVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWNLNSAPKIKVFLWKVLKGAVAVEDR 801
Query: 427 LVRRYVLQAADNFCVGGCGI----PETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVT 482
L R VL GC + ET++H+ QC +VW L + G
Sbjct: 802 LRTRGVL------IEDGCSMCPEKNETLNHILFQCPLARQVWALT----PMQSPNHGFGD 851
Query: 483 QHFIQFTNLAGMTRGSH--DYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFS 540
F ++ G + +L+ + +W +WK RN +F + S LSIV +
Sbjct: 852 SIFTNVNHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLSIVGKALEDC 911
Query: 541 FLWLSSN 547
WL ++
Sbjct: 912 KEWLKAH 918
>UniRef100_Q9ZQG1 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 166 bits (420), Expect = 2e-39
Identities = 131/451 (29%), Positives = 201/451 (44%), Gaps = 48/451 (10%)
Query: 115 VLDRISARLSSWNNKYLSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFW 174
+ D++ +RLS W + LS GG+ ILLK+V ++ VY +S FK ++ S +W
Sbjct: 544 IKDKLKSRLSGWFARTLSLGGKEILLKAVAMAMQVYAMSCFKLTKTTCKNLTSAMSDFWW 603
Query: 175 GGCEVSRKIAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKA 234
E RK WV W+ +CL GGLG R + FN +LL K WR+L + L+ R K+
Sbjct: 604 NALEHKRKTHWVSWEKLCLAKESGGLGFRDIESFNQALLAKQSWRILQYPSFLFARFFKS 663
Query: 235 RYGEIGGMVKE--GGRHSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDN 292
RY + ++ G R S C++ GR LL +R+ VGNG++ W D
Sbjct: 664 RYFDDEEFLEADLGVRPS----YACCSILFGRELLA-----KGLRKEVGNGKSLNVWMDP 714
Query: 293 WLGDV----PLKFQFSRLFDLAVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRE 348
W+ D+ PL+ FS DL VN + ED W+R LL EE
Sbjct: 715 WIFDIAPRLPLQRHFSVNLDLKVNDLINFEDR------------CWKRDLL--EELFYPT 760
Query: 349 CVNLLNNIVLQDNIQDKWRWLLDPILGYTVKGTY--CFLTNMEGQV--------TSGVGF 398
V L+ N+ D W WL Y+VK Y F +N + T+G+
Sbjct: 761 DVELITKRNPVVNMDDFWVWLHAKTGEYSVKSGYWLAFQSNKLDLIQQANLLPSTNGLKE 820
Query: 399 DVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCT 458
VW + K+ +F WR+L + ++RR + + D C E+ +H+ C+
Sbjct: 821 QVWSTKSSPKIKMFLWRILSAALPVADQIIRRGM--SIDPRCQICGDEGESTNHVLFTCS 878
Query: 459 SFGRVWYLVCHWLGIPCV---FQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWK 515
+VW L G+P FQ + IQF D +K W +W +WK
Sbjct: 879 MARQVWAL----SGVPTPEFGFQNASIFANIQFLFELKKMILVPDLVKRSWPWVLWRLWK 934
Query: 516 ERNNCVFNNLASDPLSIVERVKLFSFLWLSS 546
RN F+ + PL+ + +++ + W +
Sbjct: 935 NRNKLFFDGITFCPLNSIVKIQEDTLEWFQA 965
>UniRef100_Q9SZ87 RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 163 bits (412), Expect = 1e-38
Identities = 148/550 (26%), Positives = 238/550 (42%), Gaps = 63/550 (11%)
Query: 19 RGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSW 78
RG +++HL FADDT+ + + + +L E SG +N KS +T + +
Sbjct: 612 RGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQD 671
Query: 79 LSEAAAV---LNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGG 135
+ + ++ + G+ YLGLP RK + ++DRI R SW+ ++LSS G
Sbjct: 672 IKRRVKLSLRIDNEGGI--GKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAG 729
Query: 136 RLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPM 195
+ ILLK+VLSS+P Y + FK P + I+S+ + +W RK+AWV WD + LP+
Sbjct: 730 KQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPI 789
Query: 196 SQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMV--KEGGRHSSRW 253
++GGLG R++ K WR+L + + L RVL +Y + +S
Sbjct: 790 NEGGLGFREIE-------AKLSWRILKEPHSLLSRVLLGKYCNTSSFMDCSASPSFASHG 842
Query: 254 WRMICNVRDGRGLLVGKWFDDNIRR----VVGNGRNTFFWYDNWLGDVPLKFQFSRLFDL 309
W RG+L G+ D +R+ +G G + W + WL P Q
Sbjct: 843 W---------RGILAGR---DLLRKGLGWSIGQGDSINVWTEAWLS--PSSPQTPIGPPT 888
Query: 310 AVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWL 369
NK+ SV D++ + + R+ L +E++ + +N L +QD WL
Sbjct: 889 ETNKDLSVHDLICHDVKSWNVEAI-RKHLPQYEDQIRKITINAL-------PLQDSLVWL 940
Query: 370 LDPILGYTVKGTYCFLTNMEGQVTSGVGF----DVWHRRVPSKVSLFAWRLLQDRVATRT 425
YT K Y L + S + F ++W KV F W+ ++ +
Sbjct: 941 PVKSGEYTTKTGYA-LAKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVGE 999
Query: 426 NLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHF 485
L RR + A+ C CG E+ HL + C +VW L P +F S H
Sbjct: 1000 ALSRRNI--EAEVTC-KRCGQTESSLHLMLLCPYAKKVWELA------PVLFNPSEATHS 1050
Query: 486 IQFTNLAGMTR-------GSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKL 538
L R G WL +W +WK RN +F+N + +V + L
Sbjct: 1051 SVALLLVDAKRMVALPPTGLGSAPLYPWL--LWHLWKARNRLIFDNHSCSEEGLVLKAIL 1108
Query: 539 FSFLWLSSNV 548
+ W+ + +
Sbjct: 1109 DARAWMEAQL 1118
>UniRef100_Q9LDL8 Hypothetical protein AT4g08830 [Arabidopsis thaliana]
Length = 947
Score = 162 bits (411), Expect = 2e-38
Identities = 148/539 (27%), Positives = 226/539 (41%), Gaps = 91/539 (16%)
Query: 18 TRGEVRLSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVT-GVNIST 76
++G ++SH+ FADD ++ E S +R IR +L SG KV+ +KS + N+S
Sbjct: 347 SQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSR 406
Query: 77 SWLSEAAAVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGR 136
+ K+ YLG+PI + VL+R+S+RL+ W + LS GR
Sbjct: 407 DLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGR 466
Query: 137 LILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMS 196
L L KSVLS +P++ +S P + ++ + + G +K+ V WD VCLP S
Sbjct: 467 LTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPKS 526
Query: 197 QGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKEGGRHSSRWWRM 256
+GGLG+R N +L+ K WRL+ D+ LW R+L+++Y +G ++E SRW
Sbjct: 527 EGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKY-RVG--LREVVSRGSRW--- 580
Query: 257 ICNVRDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLKFQFSRLFDLAV----- 311
VVGNGR+ FW DNWL L + AV
Sbjct: 581 ----------------------VVGNGRDILFWSDNWL-------SHEALINRAVIEIPN 611
Query: 312 -NKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECVNLLNNI----VLQDNI---Q 363
KE V+D+ W G L W+ + + ++ + V+ D++ +
Sbjct: 612 SEKELRVKDL----WANG----------LGWKLDKIEPYISYHTRLELAAVVVDSVTGAR 657
Query: 364 DKWRWLLDPILGYTVKGTYCFLT-NMEGQVTSGVGFD-VWHRRVPSKVSLFAWRLLQDRV 421
D+ W +TVK Y LT + + + FD +W +V F W + V
Sbjct: 658 DRLSWGYSADGVFTVKSAYRLLTEDHDPRPNMAAFFDRLWRVVALERVKTFLWHIGDTSV 717
Query: 422 ATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSV 481
C GG ET+ H+ C S +W + F GS+
Sbjct: 718 C---------------QVCKGG---DETILHVLKDCPSIAGIWRRLVQVQRSYDFFNGSL 759
Query: 482 TQHFIQFTNLAGMTRGSHDYL-KIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLF 539
+ NL GM Y ++ VW WK R VF + +RVK F
Sbjct: 760 FGWL--YVNL-GMKNAETGYAWATLFAIVVWWSWKWRCGYVFGEVG----KCRDRVKFF 811
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.326 0.142 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,040,725,354
Number of Sequences: 2790947
Number of extensions: 45829901
Number of successful extensions: 137008
Number of sequences better than 10.0: 453
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 135752
Number of HSP's gapped (non-prelim): 840
length of query: 569
length of database: 848,049,833
effective HSP length: 133
effective length of query: 436
effective length of database: 476,853,882
effective search space: 207908292552
effective search space used: 207908292552
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)
Medicago: description of AC148755.5