BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148653.1 - phase: 0
(693 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum] 1143 0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ... 525 e-147
UniRef100_Q93Y69 Putative gag-pol [Oryza sativa] 462 e-128
UniRef100_Q40580 Integrase [Nicotiana tabacum] 437 e-121
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa... 431 e-119
UniRef100_Q6L974 GAG-POL [Vitis vinifera] 416 e-115
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum] 413 e-114
UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris] 385 e-105
UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris] 385 e-105
UniRef100_Q60D74 Putative polyprotein [Oryza sativa] 380 e-104
UniRef100_Q6L5D6 Putative polyprotein [Oryza sativa] 375 e-102
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana] 374 e-102
UniRef100_Q7XWL1 OSJNBa0052O21.5 protein [Oryza sativa] 363 7e-99
UniRef100_Q75G47 Putative polyprotein [Oryza sativa] 362 2e-98
UniRef100_Q5W7A0 Putative polyprotein [Oryza sativa] 362 2e-98
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa] 358 3e-97
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa] 358 4e-97
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa] 357 5e-97
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa] 357 7e-97
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa] 357 7e-97
>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 1143 bits (2956), Expect = 0.0
Identities = 525/694 (75%), Positives = 626/694 (89%), Gaps = 2/694 (0%)
Query: 1 MLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 60
+LEKTCCALAWAA+RLR YM++HTT LISKMDP+KYIFEKPALTGR+ARWQM+L+EYDI+
Sbjct: 1568 LLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQ 1627
Query: 61 YRSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWG 120
Y SQKAIKGSIL+D+LA QPIEDYQP+ F+FPDE+IMYLKMKDC EPL+ EGPDP+ +W
Sbjct: 1628 YTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDPDDKWT 1687
Query: 121 LIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKN 180
L+FDGAVN+ G+G+GA+++ P+GAH+PF+ARLTFD TNN AEYEACIMGIEEAIDLRIK
Sbjct: 1688 LMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKT 1747
Query: 181 LDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALAT 240
LDI+GDSALV+NQ+ G+W T P L+PY+DY RR+LTFF KV+L+H+PRDENQMADALAT
Sbjct: 1748 LDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMADALAT 1807
Query: 241 LSSMYQVNRWNEVPLIHIRHLERPAHVFAIEEVV-DDKPWFHDIKCFLQRQEYPLGASNK 299
LSSM +VN WN VP + + LERPA+VFA E VV D+KPW++DIK FL+ QEYP GAS
Sbjct: 1808 LSSMIKVNWWNHVPHVAVNRLERPAYVFAAESVVIDEKPWYYDIKNFLKTQEYPEGASKN 1867
Query: 300 DKKTLRRLSGNFFLN-GDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGPTMA 358
DKKTLRRL+G+F+LN D+LYKRNFDMVLLRC+D+ EAD+LM E+HEGSFGTH+ G MA
Sbjct: 1868 DKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEGSFGTHAGGHAMA 1927
Query: 359 KKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDMIGR 418
KK+LRAGYYWMTME+DC+K+A++C+KCQIYADR+HVPP+ LNV++SPWPF+MWGIDMIG+
Sbjct: 1928 KKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPWPFAMWGIDMIGK 1987
Query: 419 IEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITDNGT 478
IEP ASNGHRFILVAIDYFTKWVEAASYAN+TKQVV +FIK IICRYGVP RIITDNG+
Sbjct: 1988 IEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRYGVPERIITDNGS 2047
Query: 479 NLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPFA 538
NLNNKMMKELC DFKIEHHNSSPYRP+MNGAVEAANKNIKKI++KMVVTYKDWHEMLPFA
Sbjct: 2048 NLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVVTYKDWHEMLPFA 2107
Query: 539 LHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYDQLNLI 598
LHGYRTS+RTSTGATP+SLVYGMEAVLP+EVEIPS+RVL++ +L EAEW+++R+++L+LI
Sbjct: 2108 LHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAEWIRTRFNELSLI 2167
Query: 599 EEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKWTPNYEGPY 658
EE+R++ +CHGQLYQ+RMK AFD+KV PR ++ GDLVLK+IL D+RGKWTPNYEGPY
Sbjct: 2168 EERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDNRGKWTPNYEGPY 2227
Query: 659 VVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
VVKK +SGGA+ L TMDGE+ PVN+D VKKYF
Sbjct: 2228 VVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYF 2261
>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0433F09 [Oryza sativa]
Length = 2876
Score = 525 bits (1351), Expect = e-147
Identities = 285/714 (39%), Positives = 422/714 (58%), Gaps = 38/714 (5%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
+EK C AL +A K+LRHYM++H LI++ DPI+Y+ +P LTGR+ +W +L+ EYDI +
Sbjct: 2179 IEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLSQPVLTGRLGKWALLMMEYDITF 2238
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
QKAIKG LA+ LA P+ D P+ + PDEEI ++++ +W L
Sbjct: 2239 VPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTAELQE--------------QWEL 2284
Query: 122 IFDGA----VNVYGS-----GIGAIIVTPEGAHIPFT-ARLTFDCTNNIAEYEACIMGIE 171
FDGA +N G+ G G + TP+G I + + L +C+NN AEYEA I G+
Sbjct: 2285 YFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLL 2344
Query: 172 EAIDLRIKNLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDE 231
A+ + +++L +GDS L+I QI +E R P LVPY ARRL+ F +E+ H+PR +
Sbjct: 2345 LALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYYTVARRLMDKFEHIEVIHVPRSK 2404
Query: 232 NQMADALATLSSMYQVNRWNEVPLIHIRHLERPAHVFAIEEVV--------DDKPWFHDI 283
N ADALA L++ N ++ PA + I E V +++ W
Sbjct: 2405 NAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLELIPEEVNIIITNSAEEEDWRQPF 2464
Query: 284 KCFLQRQEYPLGASNKDKKTLRRLSGNFFLNGDILYKRNFDM-VLLRCVDKHEADLLMHE 342
+ + P +++ L+R ++ +LYKR++ VLLRCVD+ EA+ ++ E
Sbjct: 2465 LDYFKHGSLP--EDPVERRQLQRRLPSYIYKAGVLYKRSYGQEVLLRCVDRSEANRVLQE 2522
Query: 343 IHEGSFGTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVL 402
+H G G H SGP M + GYYW + ADC K AK C+ CQI+ + H PP L+
Sbjct: 2523 VHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPAPLHPT 2582
Query: 403 SSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHI 462
WPF WGID+IG I P +S GHRFIL A DYF+KW EA V V+ F++ HI
Sbjct: 2583 VPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKWAEAVPLREVKSSDVINFLERHI 2642
Query: 463 ICRYGVPSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQ 522
I R+GVP RI +DN ++ + + +KI+ + S+ Y PQ NG EA NK + KI++
Sbjct: 2643 IYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILK 2702
Query: 523 KMVVTY-KDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAE 581
K V + +DWH+ L AL YR ++RT T ATP+SLVYG EAVLP+E+++PS+RV + E
Sbjct: 2703 KTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVYGNEAVLPLEIQLPSLRVAIHDE 2762
Query: 582 LSEAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGD--LVLKKI 639
L++ E ++ R+ +L+ +EE+R+ AL + +LY++ M A+DK V R F++G+ LVL++
Sbjct: 2763 LTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRAYDKLVKQRVFRKGELVLVLRRP 2822
Query: 640 LTFQPDSRGKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYFV 693
+ +GK+ P +EGPYV+++AY GGA L G + P+N +KKYFV
Sbjct: 2823 IVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQPMPPINGRFLKKYFV 2876
>UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]
Length = 1262
Score = 462 bits (1188), Expect = e-128
Identities = 251/646 (38%), Positives = 371/646 (56%), Gaps = 40/646 (6%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
+EK C AL +A K+LRHYM++H LI+ +DPI+Y+ +P L GR+ +W +L+ E+DI Y
Sbjct: 633 IEKLCLALIFALKKLRHYMLTHQIQLIATVDPIRYVLSQPLLAGRLGKWALLMMEFDITY 692
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
QKA+KG LA+ LA P+ D P+ + PDE++ + + E W L
Sbjct: 693 VPQKAVKGQALAEFLAAHPVPDDSPLITELPDEDVFTI--------------ETEPSWEL 738
Query: 122 IFDGAVNVYG---------SGIGAIIVTPEGAHIPFT-ARLTFDCTNNIAEYEACIMGIE 171
FDGA +G G + TP+G I + + L +C+NN AEYEA I G+
Sbjct: 739 CFDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLL 798
Query: 172 EAIDLRIKNLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDE 231
A+ + ++++ +YGDS L++ QI +E LVPY ARRL+ F +E+ H+PR
Sbjct: 799 LALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPYYSAARRLMEMFGHIEVMHVPRSR 858
Query: 232 NQMADALATLSSMY--------QVN---RWNEVPLIHIRHLERPAHVFAIEEVVDDKPWF 280
N ADALA L++ QVN RW ++ + E +D W
Sbjct: 859 NAPADALAKLAAALVLPQGGPTQVNVEERWLLPAVLELLPNEYEVDTVMAAAAKEDD-WR 917
Query: 281 HDIKCFLQRQEYPLGASNKDKKTLRRLSGNFFLNGDILYKRNFDM-VLLRCVDKHEADLL 339
+ + P ++ +++ L+R ++ + Y+R++ VLLRCVD+ EAD
Sbjct: 918 VPFLNYFRHGSLP--DNSVERRQLQRRLPSYVYKSGVSYRRSYGQEVLLRCVDRLEADKA 975
Query: 340 MHEIHEGSFGTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTAL 399
+ E+H G G H SGP M + AGYYW + ADC K AK C+ CQI+ D H+PP L
Sbjct: 976 LQEVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLKVAKSCHGCQIHGDFKHLPPVPL 1035
Query: 400 NVLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 459
+ WPF WGID+IG I+P +S GHRFI DYF+KW EA S V V+ F++
Sbjct: 1036 HPTVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAITDYFSKWAEAVSLREVKTDNVISFLE 1095
Query: 460 NHIICRYGVPSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKK 519
HII R+GVP RI +DNG + M+ +KI + S+ Y PQ NG +EA NK + K
Sbjct: 1096 RHIIYRFGVPHRISSDNGKAFKSHKMQRFIAKYKIRWNYSTGYYPQANGMIEAFNKTLGK 1155
Query: 520 IIQKMVVTY-KDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLM 578
I++K+V + +DWH+ L AL YR ++RT T TP+SLVYG EAVLP+EVE+PS+RV +
Sbjct: 1156 ILKKVVNRHRRDWHDHLFEALWAYRVTVRTPTQCTPYSLVYGSEAVLPLEVEVPSLRVAI 1215
Query: 579 EAELSEAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKV 624
E+++ E V+ R+ +L+ +EE R+ A+ + +LY++ M A++K V
Sbjct: 1216 HEEITQDEQVRLRFQELDTLEEGRLQAVQNLELYRQNMVRAYNKLV 1261
>UniRef100_Q40580 Integrase [Nicotiana tabacum]
Length = 382
Score = 437 bits (1124), Expect = e-121
Identities = 199/343 (58%), Positives = 268/343 (78%), Gaps = 2/343 (0%)
Query: 351 HSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSM 410
H +G ++KK+LRAGY+WMTME DC ++ ++C++CQIYAD + VPP LN S+PWPF+
Sbjct: 26 HMNGFVLSKKILRAGYFWMTMETDCIRYVQKCHQCQIYADMMRVPPNKLNATSAPWPFAA 85
Query: 411 WGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPS 470
WG+D+IG IEP ASN H+FILVAIDYFTKWVEAASY VTK+VV F+++ I+CR+ VP
Sbjct: 86 WGMDIIGPIEPTASNWHKFILVAIDYFTKWVEAASYKVVTKKVVTDFVRDCIVCRFEVPE 145
Query: 471 RIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKD 530
IITDN NL++ +MK +CD FKI+H NS+ Y PQMNG VEAANKNIKKI++KMV +K+
Sbjct: 146 SIITDNAANLHSALMKAMCDTFKIKHKNSTAYMPQMNGVVEAANKNIKKILRKMVDNHKE 205
Query: 531 WHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQS 590
WHE LPFAL GY T + TS GATP+ LVY EAV+ +EVEI S+R++ E LS+AEW++S
Sbjct: 206 WHEKLPFALLGYCTIVCTSIGATPYLLVYSTEAVIHVEVEITSLRIIQEDVLSDAEWIRS 265
Query: 591 RYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKW 650
RY+QL+LI+ KR+ +CHGQLY RM AF+K+V PR+F G LVLK+I Q +++GK+
Sbjct: 266 RYEQLSLIDGKRV--VCHGQLYHNRMSRAFNKRVKPRQFASGQLVLKRIFPHQDEAKGKF 323
Query: 651 TPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYFV 693
+PN++GPY+V + +GG + L +DGE +P+N+D VK+Y+V
Sbjct: 324 SPNWQGPYMVHRVLTGGTLILAEIDGEVWPKPINSDVVKRYYV 366
>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
Length = 1580
Score = 431 bits (1108), Expect = e-119
Identities = 249/694 (35%), Positives = 375/694 (53%), Gaps = 51/694 (7%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
+EK C L ++ RLRHY++S+ +I K D +KY+ P L GRI +W L+E+D+ Y
Sbjct: 928 VEKLCLCLYFSCTRLRHYLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRY 987
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
S KAIKG +A+ + D+ D+ I +++ W L
Sbjct: 988 ESPKAIKGQAIANFIV------------DYRDDSIGSVEVVP---------------WTL 1020
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+V +G GIG +I++P GA F + TNN AEYEA + G++ ++ +
Sbjct: 1021 FFDGSVCTHGCGIGLVIISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTI 1080
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+I GDS LVI+Q+ GE+E ++ L+ Y + + L+ F V L H+ R++N A+ LA
Sbjct: 1081 EIMGDSLLVISQLAGEYECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQG 1140
Query: 242 SSMYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGASNKDK 301
+S Y+ + I+H++ V ++ W + + +LQ S
Sbjct: 1141 ASGYK---------LMIKHVQIEVAVITADD------WRYYVYQYLQ------DPSQSAS 1179
Query: 302 KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGPTMAKKM 361
+ LR + + L D LY R D VLL+C+ +A + + E+HEG GTH S M +
Sbjct: 1180 RKLRYKALKYILLDDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLL 1239
Query: 362 LRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDMIGRIEP 421
AGY+W TM DC+++ K C CQ + P +A+N + PWPF WGIDMIG I P
Sbjct: 1240 RCAGYFWPTMLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINP 1299
Query: 422 KASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITDNGTNLN 481
+S GH+FILVA DYFTKWVEA V ++F++ HII R G+P I TD G+
Sbjct: 1300 PSSKGHKFILVATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFV 1359
Query: 482 NKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTY-KDWHEMLPFALH 540
+ + D I+ NSSPY Q NG EA+NK++ K+I++ + Y + WH L AL
Sbjct: 1360 SDEFIQFADSMGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALW 1419
Query: 541 GYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYDQLNLIEE 600
YR + S P+ LVY +A+LP EV I S R ++ +L+ E+ D+ + +
Sbjct: 1420 SYRMACHGSIQVPPYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQ 1479
Query: 601 KRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTF-QPDSR-GKWTPNYEGPY 658
R+ AL ++R+ ++KKV P++F EG+L+ K IL DS+ GKW+PN+EGP+
Sbjct: 1480 SRLRALAKVIKDKERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPF 1539
Query: 659 VVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
+ K S GA LQ +DGE R +N +KKY+
Sbjct: 1540 QIHKVVSKGAYMLQGLDGEVYDRALNGKYLKKYY 1573
>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
Length = 1027
Score = 416 bits (1070), Expect = e-115
Identities = 247/697 (35%), Positives = 371/697 (52%), Gaps = 38/697 (5%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
+E AL AA++LR Y +H +++ P++ I KP LTGR+ +W + LSE+ IE+
Sbjct: 362 MELISLALRSAAQKLRPYFQAHPVIVLTDQ-PLRNILHKPDLTGRMLQWAIELSEFGIEF 420
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + ++KG ++AD + ++ +P EG + W L
Sbjct: 421 QPRLSMKGQVMADFV------------------------LEYSRKPGQHEGSRKKEWWTL 456
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
DGA GSG+G ++ +P G H+ RL F +NN AEYEA + G++ A+ L + L
Sbjct: 457 RVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKL 516
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
I+ DS LV+ + E+E + + Y R L F + + I R +N+ ADALA +
Sbjct: 517 RIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALAGI 576
Query: 242 SSMYQVNRWNEVPLIHIRHLERPAHVFAIEEV----VDDKPWFHDIKCFLQRQEYPLGAS 297
++ + +P IH++ + + DD+ W +DI +++ P
Sbjct: 577 AASLSIKEAILLP-IHVQTNPSVSEISICSTTEAPQADDQEWMNDITEYIRTGTLP--GD 633
Query: 298 NKDKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGPTM 357
K +R + F L G LYKR+F LRC+ EA ++ E+HEG +G HS G ++
Sbjct: 634 PKQAHKVRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNHSGGRSL 693
Query: 358 AKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDMIG 417
A + GYYW TM+ + + KRC KCQ YA H+P T L +S PWPF+ WG+D++
Sbjct: 694 AHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQWGMDIV- 752
Query: 418 RIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITDNG 477
R P A +F+LVA DYF+KWVEA +YA+ + V KF+ +IICR+G+P II DNG
Sbjct: 753 RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQTIIADNG 812
Query: 478 TNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYK-DWHEMLP 536
++ + C + I + S+P PQ NG EA NK + ++K + K W E LP
Sbjct: 813 PQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGKWVEELP 872
Query: 537 FALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYDQLN 596
L YRT+ TG TPF+L YGM+AV+PIE+ +P+I A+ S+A R L+
Sbjct: 873 GVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLGR--NLD 929
Query: 597 LIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPD-SRGKWTPNYE 655
+E R SA YQ+R +++KV PR K G LVL+K + GK+ N+E
Sbjct: 930 WTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGKFQANWE 989
Query: 656 GPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
GPY+V KA GA LQ +DG L RP N +K+Y+
Sbjct: 990 GPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026
>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 413 bits (1062), Expect = e-114
Identities = 187/244 (76%), Positives = 223/244 (90%)
Query: 1 MLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 60
+LEKTCCALAWAA+RLR YM++HTT LISKMDP+KYIFEKPALTGR+ARWQM+L+EYDI+
Sbjct: 1570 LLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQ 1629
Query: 61 YRSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWG 120
Y SQKAIKGSIL+D+LA QPIEDYQP+ F+FPDE+IMYLK+KDC+EPL+ EGPDP+ +W
Sbjct: 1630 YTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWT 1689
Query: 121 LIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKN 180
L+FDGAVN+ G+G+GA+++ P+GAHIPF+ARLTFD TNN AEYEACIMGIEEAIDLRIK
Sbjct: 1690 LMFDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKT 1749
Query: 181 LDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALAT 240
LDIYGDSALV+NQ+ G+W T P L+PY+DY RR+LTFF KV L+H+PRDENQMADALAT
Sbjct: 1750 LDIYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALAT 1809
Query: 241 LSSM 244
LSSM
Sbjct: 1810 LSSM 1813
>UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 385 bits (989), Expect = e-105
Identities = 240/702 (34%), Positives = 376/702 (53%), Gaps = 54/702 (7%)
Query: 1 MLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 60
+LEK A+ AA++LR Y +HT ++S P++ +K +GR+ RW + LSE+++E
Sbjct: 108 LLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKALQKLDTSGRLLRWAVELSEFEVE 166
Query: 61 YRSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWG 120
Y+ + AIK LAD + ++ + +EE +P W
Sbjct: 167 YKPRTAIKAQALADFI----------VEASYEEEE------------------EPVGVWK 198
Query: 121 LIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKN 180
L DG+ GSG G I+ +PEG F + F +NN AEYEA I GI+ + K
Sbjct: 199 LAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASNNEAEYEAAIAGIKMCMAADAKK 256
Query: 181 LDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALAT 240
+ + DS LV +QI GE+E R P + Y + L +E+ +PR +N ADAL+
Sbjct: 257 IRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQLISLEVVLVPRADNSQADALSK 316
Query: 241 LSS--MYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGASN 298
L+S + +NR V ++ R +++ + V K W+ DI QEY L
Sbjct: 317 LASSTLQDLNRTVMVEVMEQRSIDKAERINC---VTAQKEWYDDI------QEYKLTGKL 367
Query: 299 KDKKTL----RRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSG 354
D +T+ +R S + + LYKR+ LLRC + E M E EG G H G
Sbjct: 368 PDDQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRCTSESEKLPAMEEAPEGICGNHIGG 427
Query: 355 PTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGID 414
++ +++R G YW TM DC ++ K+C KCQ +A ++ P L + +P PF+ WG+D
Sbjct: 428 KALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKFAPVMNQPANDLCPILNPIPFAQWGMD 487
Query: 415 MIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIIT 474
++G AS G ++++VA+DYFTKW+EA + + V FI +II R+G+P I+
Sbjct: 488 ILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKFIKARQVRSFIWKNIITRFGIPQCIVF 546
Query: 475 DNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKD-WHE 533
D+GT + +K+ C +FKI+ +++ PQ NG EAANK I +QK + +K W +
Sbjct: 547 DHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGLWAD 606
Query: 534 MLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVL-MEAELSEAEWVQSRY 592
++P L RT+ + +TG +PFSL +G EAV+PIEV +PS RV + E++E Q
Sbjct: 607 LVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNE----QLMR 662
Query: 593 DQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTF-QPDSRGKWT 651
+ L+ + E R+ A + RM ++++V R EGDLVL++ + + GK+T
Sbjct: 663 EALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDLVLRRTAAVGKGNVHGKFT 722
Query: 652 PNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYFV 693
N+EGPY + + + G+ L T++GE L+ N D +KKYFV
Sbjct: 723 ANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYFV 764
>UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 385 bits (989), Expect = e-105
Identities = 240/702 (34%), Positives = 376/702 (53%), Gaps = 54/702 (7%)
Query: 1 MLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 60
+LEK A+ AA++LR Y +HT ++S P++ +K +GR+ RW + LSE+++E
Sbjct: 108 LLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKALQKLDTSGRLLRWAVELSEFEVE 166
Query: 61 YRSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWG 120
Y+ + AIK LAD + ++ + +EE +P W
Sbjct: 167 YKPRTAIKAQALADFI----------VEASYEEEE------------------EPVGVWK 198
Query: 121 LIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKN 180
L DG+ GSG G I+ +PEG F + F +NN AEYEA I GI+ + K
Sbjct: 199 LAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASNNEAEYEAAIAGIKMCMAADAKK 256
Query: 181 LDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALAT 240
+ + DS LV +QI GE+E R P + Y + L +E+ +PR +N ADAL+
Sbjct: 257 IRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQLISLEVVLVPRADNSQADALSK 316
Query: 241 LSS--MYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGASN 298
L+S + +NR V ++ R +++ + V K W+ DI QEY L
Sbjct: 317 LASSTLQDLNRTVMVEVMEQRSIDKAERINC---VTAQKEWYDDI------QEYKLTGKL 367
Query: 299 KDKKTL----RRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSG 354
D +T+ +R S + + LYKR+ LLRC + E M E EG G H G
Sbjct: 368 PDDQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRCTSESEKLPAMEEAPEGICGNHIGG 427
Query: 355 PTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGID 414
++ +++R G YW TM DC ++ K+C KCQ +A ++ P L + +P PF+ WG+D
Sbjct: 428 KALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKFAPVMNQPANDLCPILNPIPFAQWGMD 487
Query: 415 MIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIIT 474
++G AS G ++++VA+DYFTKW+EA + + V FI +II R+G+P I+
Sbjct: 488 ILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKFIKARQVRSFIWKNIITRFGIPQCIVF 546
Query: 475 DNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKD-WHE 533
D+GT + +K+ C +FKI+ +++ PQ NG EAANK I +QK + +K W +
Sbjct: 547 DHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGLWAD 606
Query: 534 MLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVL-MEAELSEAEWVQSRY 592
++P L RT+ + +TG +PFSL +G EAV+PIEV +PS RV + E++E Q
Sbjct: 607 LVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNE----QLMR 662
Query: 593 DQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTF-QPDSRGKWT 651
+ L+ + E R+ A + RM ++++V R EGDLVL++ + + GK+T
Sbjct: 663 EALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDLVLRRTAAVGKGNVHGKFT 722
Query: 652 PNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYFV 693
N+EGPY + + + G+ L T++GE L+ N D +KKYFV
Sbjct: 723 ANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYFV 764
>UniRef100_Q60D74 Putative polyprotein [Oryza sativa]
Length = 1869
Score = 380 bits (976), Expect = e-104
Identities = 233/698 (33%), Positives = 357/698 (50%), Gaps = 49/698 (7%)
Query: 3 EKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYR 62
+K A+ A+++LRHY +H +++ P+ I TGR+ +W + LSE+D+ +
Sbjct: 1212 QKMLYAILMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGTGRVVKWAIELSEFDLHFE 1270
Query: 63 SQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDP---ESRW 119
+ AIK LAD +A P E++ + P GP + W
Sbjct: 1271 PRHAIKSQALADFVAEWT-----------PAPELVSV-------PEASSGPSQLPHTAHW 1312
Query: 120 GLIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIK 179
+ FDG++++ G+G G + +P G + + RL F TNN+AEYE + G+ A L I+
Sbjct: 1313 VMQFDGSLSLQGAGAGVTLTSPSGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIR 1372
Query: 180 NLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALA 239
L + GDS LV+NQ+ E+ P + Y RR+ F+ +EL H+PR +N MAD L+
Sbjct: 1373 RLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNMMADELS 1432
Query: 240 TLSSMYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGASNK 299
L+S +R P L +P+ + A W +I+ +L + P +
Sbjct: 1433 RLAS----SRAQTPPGAFEERLAQPSALIA---------WIAEIQAYLTDKTLP--EDRE 1477
Query: 300 DKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGPTMAK 359
+ + R+S + L LY+R + +LL+C+ + + +L+ +IHEG G HS+ T+
Sbjct: 1478 GSERVHRISKRYVLVEGTLYRRAANGILLKCIPREQGVVLLADIHEGECGAHSASRTLVG 1537
Query: 360 KMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDMIGRI 419
K R G+YW T D +RC CQ +A +IH P AL + WPF++WG+ ++G
Sbjct: 1538 KAFRQGFYWPTALNDAVDLVRRCRACQFHAKQIHQPAQALQTIPLSWPFAVWGLHILGPF 1597
Query: 420 EPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITDNGTN 479
+A G ++ VAID FTKW EA + K +KFIK I R+GVP+RIITDNGT
Sbjct: 1598 R-RAPGGFEYLYVAIDKFTKWPEAYPVVKIDKHSALKFIKG-ITARFGVPNRIITDNGTQ 1655
Query: 480 LNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTY-----KDWHEM 534
+++ + C+D I+ +SP P+ NG VE AN I K ++ W E
Sbjct: 1656 FTSELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEE 1715
Query: 535 LPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYDQ 594
LP L RT+ +TG TPF LVYG EAVLP E+ + S R M EA+ Q R D
Sbjct: 1716 LPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLKSPRATM---YCEADQDQLRRDD 1772
Query: 595 LNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKWTPNY 654
L+ +EE+R A YQ+ ++ V R DLVL+++ T K +P +
Sbjct: 1773 LDYLEERRRRAALRAARYQQSLRRYHQCHVRARSLCVDDLVLRRVQT--RAGLSKLSPMW 1830
Query: 655 EGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
EGPY V G++ L T DG EL P N + +++++
Sbjct: 1831 EGPYRVVGVPRPGSIRLATGDGTELPNPWNIEHLRRFY 1868
>UniRef100_Q6L5D6 Putative polyprotein [Oryza sativa]
Length = 1514
Score = 375 bits (963), Expect = e-102
Identities = 232/698 (33%), Positives = 355/698 (50%), Gaps = 54/698 (7%)
Query: 3 EKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYR 62
+K A+ A+++LRHY +H +++ P+ I TGR+ RW + LSE+D+ +
Sbjct: 862 QKMLYAILMASRKLRHYFQAHRVTVVTSY-PLGQILHNREGTGRVVRWAIELSEFDLRFE 920
Query: 63 SQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDP---ESRW 119
+ AIK LAD +A ++ P + P GP + W
Sbjct: 921 PRHAIKSQALADFVA-----EWTPAP-------------EPVSAPEASSGPTQLPHTAYW 962
Query: 120 GLIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIK 179
+ FDG++++ G+G G + +P G + + RL F TNN+AEYE + G+ A L I+
Sbjct: 963 VMQFDGSLSLQGAGAGVTLTSPSGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIR 1022
Query: 180 NLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALA 239
L + GDS LV+NQ+ E++ P + Y RR+ F+++EL H+PR +N +AD L+
Sbjct: 1023 RLLVLGDSQLVVNQVCKEYQCSDPQMDAYVRQVRRMERHFDRIELRHVPRRDNAVADELS 1082
Query: 240 TLSSMYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGASNK 299
L+S +R P L +P W +I+ +L + P +
Sbjct: 1083 RLAS----SRAQTPPGAFEERLAQPLIA-----------WITEIQAYLADKTLP--EDRE 1125
Query: 300 DKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGPTMAK 359
+ +RR+S + L LY+R + VLL+C+ + + L+ ++HEG G HS T+
Sbjct: 1126 GSERVRRISKRYVLVEGTLYRRAANGVLLKCIPREQGVELLADVHEGECGAHSVSRTLVG 1185
Query: 360 KMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDMIGRI 419
K R G+YW T D +RC CQ +A + H P AL + WPF++WG+D++GR
Sbjct: 1186 KAFRQGFYWPTALNDAVDLVRRCRACQFHARQTHQPAQALQTIPLSWPFAVWGLDILGR- 1244
Query: 420 EPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITDNGTN 479
A G ++ VA+D FTKW EA + K +KFI+ I R+GVP+RIITDNGT
Sbjct: 1245 ---APGGFEYLYVAVDKFTKWPEAYPVIKIDKHSALKFIRG-ITARFGVPNRIITDNGTQ 1300
Query: 480 LNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTY-----KDWHEM 534
+++ + C+D I+ +SP P+ NG VE AN I K ++ W E
Sbjct: 1301 FTSELFGDYCEDMGIKLCFASPTHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEE 1360
Query: 535 LPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYDQ 594
LP L RT+ +TG TPF LVYG EAVLP E+ + S RV M EA+ Q R D
Sbjct: 1361 LPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRSPRVTM---YCEADQDQLRRDD 1417
Query: 595 LNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKWTPNY 654
L+ +EE+R A YQ+ ++ + V R DLVL+++ T K +P +
Sbjct: 1418 LDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQT--RAGLSKLSPMW 1475
Query: 655 EGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
EGPY V G++ L T DG EL P N + + +++
Sbjct: 1476 EGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLCRFY 1513
>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 374 bits (961), Expect = e-102
Identities = 241/710 (33%), Positives = 362/710 (50%), Gaps = 53/710 (7%)
Query: 1 MLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 60
++EK A+ +A++LR Y SHT +++ P++ P+ +GR+ +W + LSEYDI+
Sbjct: 1163 VIEKAALAVVTSARKLRPYFQSHTIAVLTDQ-PLRVALHSPSQSGRMTKWAVELSEYDID 1221
Query: 61 YRSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWG 120
+R + A+K +LAD L P++ + EE W
Sbjct: 1222 FRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEE-----------------------WS 1258
Query: 121 LIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKN 180
L DG+ + GSGIG +V+P + + RL F TNN+AEYE I G+ A ++I
Sbjct: 1259 LYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITT 1318
Query: 181 LDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALAT 240
+ + DS L+ Q++GE+E ++ + Y + + F +L IPR +N ADALA
Sbjct: 1319 IHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAA 1378
Query: 241 LSSMYQVNRWNEVPLIHIRHLERPA--HVFAIEEV-----------VDDKPWFHDIKCFL 287
L+ + +P + +++P+ A+E V D W +I+ +L
Sbjct: 1379 LALTSDSDLRRIIP---VESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYL 1435
Query: 288 QRQEYPLGASNKDKKTLRRL---SGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIH 344
P DK T RRL + + L + L K + +L C+ E + +M E H
Sbjct: 1436 SDGTLP-----SDKWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETH 1490
Query: 345 EGSFGTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSS 404
EG+ G HS G +A K+ + G+YW TM +DC +C +CQ +A IH P L +
Sbjct: 1491 EGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVA 1550
Query: 405 PWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIIC 464
P+PF W +D++G + AS RFILV DYFTKWVEA SYA + V F+ IIC
Sbjct: 1551 PYPFMRWAMDIVGPMP--ASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIIC 1608
Query: 465 RYGVPSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKM 524
R+G+P IITDNG+ + + C +KI + S+P PQ NG EA NK I ++K
Sbjct: 1609 RHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKR 1668
Query: 525 VVTYKD-WHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELS 583
+ K W + L L YRT+ R++T TPF+ YGMEA+ P EV S+R M +
Sbjct: 1669 LDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNP 1728
Query: 584 EAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQ 643
E + D+L+ +EE R +ALC Q YQ +++KVH R F GDLVL+K+
Sbjct: 1729 ELN-DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENT 1787
Query: 644 PD-SRGKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
+ + GK N+EG Y V K G L TM G + R N+ +K+Y+
Sbjct: 1788 AEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837
>UniRef100_Q7XWL1 OSJNBa0052O21.5 protein [Oryza sativa]
Length = 1888
Score = 363 bits (933), Expect = 7e-99
Identities = 231/719 (32%), Positives = 355/719 (49%), Gaps = 57/719 (7%)
Query: 3 EKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYR 62
+K + ++++LRHY +H +++ P+ I TGR+ RW + LSE+D+ +
Sbjct: 1197 QKMLYTILMSSRKLRHYFQAHRVTVVTSY-PLGQILHNREGTGRVVRWAIELSEFDLRFE 1255
Query: 63 SQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDP---ESRW 119
+ AIK LAD +A ++ P + P GP + W
Sbjct: 1256 PRHAIKSQALADFVA-----EWTPAP-------------EPVSAPEASSGPSQLPHTAYW 1297
Query: 120 GLIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIK 179
+ FDG++++ G+G +++P G + + L F TNN+AEYE + G+ A L I+
Sbjct: 1298 VMQFDGSLSLQGAGARVTLISPSGDVLRYLVHLDFRATNNMAEYEGLLAGLRVAAGLGIR 1357
Query: 180 NLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALA 239
L + GDS LV+NQ+ E+ P + Y RR+ F+ +EL H+PR +N +AD L+
Sbjct: 1358 RLLVLGDSLLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNAVADELS 1417
Query: 240 TLSSMYQVN------------RWNEVPLIHIRHLERPAHVFAI-----EEVVDDKP---- 278
L+S VPL ERP + E P
Sbjct: 1418 RLASSRAQTPPGAFEERLAQPSARPVPLGETDAPERPPRPVGVQASGPEGSAPSSPRLIA 1477
Query: 279 WFHDIKCFLQRQEYPLGASNKDKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADL 338
W +I+ +L + P ++ +RR+S + ILY+R + VLL+C+ + +
Sbjct: 1478 WITEIQAYLADKTLPEDREGSER--VRRISKRYVQVEGILYRRAANGVLLKCIPREQGVE 1535
Query: 339 LMHEIHEGSFGTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTA 398
L+ +IHEG G HS+ T+ K R G+YW T D +RC CQ +A + H P A
Sbjct: 1536 LLADIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRRCRACQFHARQTHQPAQA 1595
Query: 399 LNVLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFI 458
L + WPF++WG+D++G +A G ++ VA+D FTKW EA + K +KFI
Sbjct: 1596 LQTIPLSWPFAVWGLDILGPFR-RAPGGFEYLYVAVDKFTKWPEAYPVIKIDKHSALKFI 1654
Query: 459 KNHIICRYGVPSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIK 518
+ I R+GVP+RIITDN T +++ + C+D I+ +SP P+ NG VE AN I
Sbjct: 1655 RG-ITARFGVPNRIITDNSTQFTSELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEIL 1713
Query: 519 KIIQKMVVTY-----KDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPS 573
K ++ W E LP L RT+ +TG TPF LVYG EAVLP E+ + S
Sbjct: 1714 KGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRS 1773
Query: 574 IRVLMEAELSEAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGD 633
RV M EA+ Q R D L+ +EE+R A YQ+ ++ + V R D
Sbjct: 1774 PRVTM---YFEADQDQLRRDDLDYLEERRRRAALRATRYQQSLRRYHQRHVRARSLCVDD 1830
Query: 634 LVLKKILTFQPDSRGKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
LVL+++ T K +P +EGPY V G++ L T DG EL P N + +++++
Sbjct: 1831 LVLRRVQT--RAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFY 1887
>UniRef100_Q75G47 Putative polyprotein [Oryza sativa]
Length = 1459
Score = 362 bits (930), Expect = 2e-98
Identities = 230/699 (32%), Positives = 358/699 (50%), Gaps = 53/699 (7%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
+EK A+ A+++LRHY +SH + S PI + + GRIA+W M L +D++Y
Sbjct: 805 VEKMIYAIVMASRKLRHYFLSHDITIPSTY-PIGEVLSNKEIAGRIAKWAMELLPFDLKY 863
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
S+ AIK +LA + ++ P + + +EE E W +
Sbjct: 864 TSRTAIKSQVLAKFVV-----EWTPTELEKKEEE--------------------EKPWTV 898
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
DGA N G+G A++ TP + ++ARL F TNN AEYE ++ + ++ L + L
Sbjct: 899 FSDGACNATGAGAAAVVKTPMKQTLKYSARLNFPSTNNTAEYEGVLLAMRKSRALGARRL 958
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
I DS LV + +E R + Y + AR F + + I R+EN AD L
Sbjct: 959 IIKTDSKLVAGHFSKTFEAREEIMTKYLEEARLNERHFLGITVKAITREENGEADELTKA 1018
Query: 242 SSMYQV--NRWNEVPLIHIRHLERPAH----VFAIEEVVDDKPWFHDIKCFLQRQEYPLG 295
++ Q N + E+ LE P++ V I+E + W I FL + P
Sbjct: 1019 AAAGQPLENSFFEI-------LEHPSYDKKEVICIQE--EGLDWRDPILKFLVSNKLP-- 1067
Query: 296 ASNKDKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGP 355
++ + ++ ++ + + LYK LL+CV K E ++ EIHEG G H +
Sbjct: 1068 EKEEEARRVQLMARKYKVIDGQLYKSGVTAPLLKCVTKEEGMQMVVEIHEGICGAHQAPR 1127
Query: 356 TMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDM 415
++A K++R G YW T+ D ++ K C CQ PP L + WPF WGID+
Sbjct: 1128 SVASKVIRQGIYWPTIMKDTEQYIKTCRACQKVGSSSKAPPKELQPIPPVWPFYRWGIDI 1187
Query: 416 IGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITD 475
+G + P+A RF++VAI+YF++W+EA + A +T + KF+ +IICR+G+P I+ D
Sbjct: 1188 VGPL-PRAKGDLRFVIVAIEYFSRWIEAEAVARITSAAMQKFVWKNIICRFGIPKEIVCD 1246
Query: 476 NGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMV--VTYKDWHE 533
NG ++ K+LC ++ + +S PQ NGAVE AN + + I+K + + W E
Sbjct: 1247 NGKQFESEKFKDLCQGLHLKINFASVGHPQTNGAVERANGKVVEAIKKRLEGSSKGKWPE 1306
Query: 534 MLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQSRYD 593
L L RT++ +TG TPF LVYG E + P EV + S RV+ E Q R
Sbjct: 1307 DLLSVLWALRTTVVWATGMTPFRLVYGDEPMTPSEVGVNSPRVIFYQEDE-----QGRKV 1361
Query: 594 QLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKWTPN 653
L +++E R+ AL + Y + + ++KKV PR +EGDLVLKK+L + GK
Sbjct: 1362 SLEMLDEIRVEALQKMEAYTEGTRKQYNKKVRPRNIEEGDLVLKKVL--NEVAVGKLESK 1419
Query: 654 YEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
+EGP++V+K GA L +DGEEL N ++KK++
Sbjct: 1420 WEGPFIVRKKMEIGAYKLAHLDGEELNHTWNAISLKKFY 1458
>UniRef100_Q5W7A0 Putative polyprotein [Oryza sativa]
Length = 1207
Score = 362 bits (930), Expect = 2e-98
Identities = 231/711 (32%), Positives = 356/711 (49%), Gaps = 50/711 (7%)
Query: 3 EKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYR 62
+K A+ A+++LRHY +H +++ P+ I TGR+ +W + LSE+D+ +
Sbjct: 525 QKMLYAILMASRKLRHYFQTHRVTVVTSY-PLGQILHNREGTGRVVKWAIELSEFDLHFE 583
Query: 63 SQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDP---ESRW 119
+ AIK LAD +A +P+ P GP + W
Sbjct: 584 PRHAIKSQALADFVAEWTPAP-EPVSI-----------------PEASSGPSQLPHTAYW 625
Query: 120 GLIFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIK 179
+ FDG++++ G+G G + +P G + + RL F TNN+AEYE + G+ A L I+
Sbjct: 626 VMQFDGSLSLQGAGAGVTLTSPSGDVLKYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIR 685
Query: 180 NLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALA 239
L + GDS LV+NQ++ E++ P + Y RR+ F+ +EL H+PR +N +AD L+
Sbjct: 686 RLLVLGDSQLVVNQVSKEYQCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNAVADELS 745
Query: 240 TLSS-------------MYQVNRWNEVPLIHIRHLERPAHVFAIEEVVDDKPWFHDIKCF 286
L+S + Q + + PL ERP + + W +I+ +
Sbjct: 746 RLASSRAQTPPGAFEERLAQPSARPD-PLGETDAPERPLRPGSAPSSLRLIAWIAEIQAY 804
Query: 287 LQRQEYPLGASNKDKKTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEG 346
L + P + + ++R+S + L LY+ + VLL C+ + + L+ IHEG
Sbjct: 805 LADKTLP--EDREGSERVQRISKRYVLVEGTLYRHAANGVLLECIPREQGVELLAAIHEG 862
Query: 347 SFGTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPW 406
G HS+ T+ K R G+YW T D ++C CQ +A + H P AL + W
Sbjct: 863 ECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRQCRACQFHAKQTHQPAQALQTIPLSW 922
Query: 407 PFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRY 466
PF+ WG+D++ R +A G ++ VAID FTKW EA + K +KFI+ I R+
Sbjct: 923 PFADWGLDIL-RPFIRAPGGFEYLYVAIDKFTKWPEAYPVIKIDKHSALKFIRG-ITARF 980
Query: 467 GVPSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKKIIQKMVV 526
GVP+RIITDNGT +++ + C+D I+ +SP P+ NG VE AN I K ++
Sbjct: 981 GVPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTF 1040
Query: 527 TY-----KDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAE 581
W E LP L RT+ +TG TPF LVYG EAVLP EV + S R M
Sbjct: 1041 NILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSEVTLRSPRATM--- 1097
Query: 582 LSEAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILT 641
EA+ Q R D L+ +EE+R A YQ+ ++ + V R DLVL+++ T
Sbjct: 1098 YCEADQDQLRRDDLDYLEERRRRAAIRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQT 1157
Query: 642 FQPDSRGKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
K +P +EGPY V G++ L T DG EL P N + +++++
Sbjct: 1158 --RAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFY 1206
>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
Length = 1986
Score = 358 bits (919), Expect = 3e-97
Identities = 219/702 (31%), Positives = 356/702 (50%), Gaps = 48/702 (6%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
++K + ++L HY H+ +++ P+ + GRIA+W + L DI +
Sbjct: 1321 VQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISF 1379
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + +IK LAD +A ++ + D P E+I + W +
Sbjct: 1380 KPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------------------WTM 1414
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+ + G+G G ++++P G + + + F ++N+AEYEA + G+ AI L IK L
Sbjct: 1415 HFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRL 1474
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+ GDS LV+NQ+ EW ++ Y+ R+L F+ +EL H+ R N+ AD LA
Sbjct: 1475 IVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANF 1534
Query: 242 SSMYQVNRWNEVPLIH-----IRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGA 296
S + ++V + H + H + + V+ + W FL QE P
Sbjct: 1535 GSKREAAP-SDVFVEHLYTPTVPHKDTTQDADTHDVVMVEADWREPFIRFLSSQELP--- 1590
Query: 297 SNKDK-KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGP 355
+KD+ + + R S + ++ LYK++ +L RCV E L+ +IH G G H++
Sbjct: 1591 QDKDEAERISRRSKLYVMHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAAR 1650
Query: 356 TMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDM 415
T+ K R G++W T +D K + C CQ +A +IH+P L + WPF++WG+DM
Sbjct: 1651 TIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDM 1710
Query: 416 IGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITD 475
+G + KA G+ + VAID F+KW+EA +T F N I+ R+GVP+RIITD
Sbjct: 1711 VGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITD 1768
Query: 476 NGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKD 530
NGT + K+ C+DF I+ +S P NG VE AN I ++ ++
Sbjct: 1769 NGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGK 1828
Query: 531 WHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQS 590
W + LP L RT+ +TG +PF LVYG EA+LP EVE S+R E + +
Sbjct: 1829 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEED 1885
Query: 591 RYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKW 650
R D L+ +EE R +AL Y + ++ ++ V R F GDLVL+KI T + R K
Sbjct: 1886 RVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKL 1943
Query: 651 TPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
+P +EGP+++ + G+ L+ DG + N + +++++
Sbjct: 1944 SPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1985
>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
Length = 2012
Score = 358 bits (918), Expect = 4e-97
Identities = 220/702 (31%), Positives = 354/702 (50%), Gaps = 48/702 (6%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
++K + ++L HY H+ +++ P+ I GRIA+W + L DI +
Sbjct: 1347 VQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISF 1405
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + +IK LAD +A + +C E E + W +
Sbjct: 1406 KPRISIKSQALADFVA----------------------EWTECQEDTPAENME---HWTM 1440
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+ + G+G G ++++P G + + + F ++N+AEYEA + G+ AI L IK L
Sbjct: 1441 HFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRL 1500
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+ GDS LV+NQ+ EW ++ Y+ R+L F+ +EL H+ R N+ AD LA
Sbjct: 1501 IVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANF 1560
Query: 242 SSMYQVNRWNEVPLIH-----IRHLERPAHVFAIEEVVDDKPWFHDIKCFLQRQEYPLGA 296
S + ++V + H + H + A + + + W + FL QE P
Sbjct: 1561 GSKREAAP-SDVFVEHLYSPTVPHKDATQAAGAHDVAMVEADWREPLIRFLTSQELP--- 1616
Query: 297 SNKDK-KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHSSGP 355
+KD+ + + R S + L+ LYK++ +L RCV E L+ +IH G G H++
Sbjct: 1617 QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAAR 1676
Query: 356 TMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWGIDM 415
T+ K R G++W T +D K + C CQ +A +IH+P L + WPF++WG+DM
Sbjct: 1677 TIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDM 1736
Query: 416 IGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRIITD 475
+G + KA G+ + VAID F+KW+EA +T F N I+ R+GVP+RIITD
Sbjct: 1737 VGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITD 1794
Query: 476 NGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKD 530
NGT + K+ C+DF I+ +S P NG VE AN I ++ ++
Sbjct: 1795 NGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGK 1854
Query: 531 WHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQS 590
W + LP L RT+ +TG +PF LVYG EA+LP EVE S+R E + +
Sbjct: 1855 WVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEED 1911
Query: 591 RYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSRGKW 650
R D L+ +EE R +AL Y + ++ ++ V R F GDLVL+KI T + R K
Sbjct: 1912 RVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKL 1969
Query: 651 TPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
+P +EGP+++ + G+ L+ DG + N + +++++
Sbjct: 1970 SPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2011
>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
Length = 2010
Score = 357 bits (917), Expect = 5e-97
Identities = 221/705 (31%), Positives = 354/705 (49%), Gaps = 54/705 (7%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
++K + ++L HY H+ +++ P+ I GRIA+W + L DI +
Sbjct: 1345 VQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISF 1403
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + +IK LAD +A + +C E E + W +
Sbjct: 1404 KPRISIKSQALADFVA----------------------EWTECQEDTPAENME---HWTM 1438
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+ + G+G G ++++P G + + + F ++N+AEYEA + G+ AI L IK L
Sbjct: 1439 HFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRL 1498
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+ GDS LV+NQ+ EW ++ Y+ R+L F+ +EL H+ R N+ AD LA
Sbjct: 1499 IVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANF 1558
Query: 242 SSMYQVNRWNEVPLIHIRHLERP-------AHVFAIEEV-VDDKPWFHDIKCFLQRQEYP 293
S +V + + + HL P V +V + + W + FL QE P
Sbjct: 1559 GSKREVAPSD----VFVEHLYTPTVPHKDTTQVAGTHDVAMVETDWREPLIRFLTSQELP 1614
Query: 294 LGASNKDK-KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHS 352
+KD+ + + R S + ++ LYK++ +L RCV E L+ +IH G G H+
Sbjct: 1615 ---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHSGICGNHA 1671
Query: 353 SGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWG 412
+ T+ K R G++W T +D K + C CQ +A +IH+P L + WPF++WG
Sbjct: 1672 AARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWG 1731
Query: 413 IDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRI 472
+DM+G + KA G+ + VAID F+KW+EA +T F N I+ R+GVP+RI
Sbjct: 1732 LDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRI 1789
Query: 473 ITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVT 527
ITDNGT + K+ C+DF I+ +S P NG VE AN I ++ ++
Sbjct: 1790 ITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPY 1849
Query: 528 YKDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEW 587
W + LP L RT+ +TG +PF LVYG EA+LP EVE S+R E +
Sbjct: 1850 AGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERY 1906
Query: 588 VQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSR 647
+ R D L+ +EE R +AL Y + ++ ++ V R F GDLVL+KI T + R
Sbjct: 1907 EEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DR 1964
Query: 648 GKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
K +P +EGP+++ + G+ L+ DG + N + +++++
Sbjct: 1965 HKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2009
>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
Length = 1986
Score = 357 bits (916), Expect = 7e-97
Identities = 221/705 (31%), Positives = 354/705 (49%), Gaps = 54/705 (7%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
++K + ++L HY H+ +++ P+ + GRIA+W + L DI +
Sbjct: 1321 VQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISF 1379
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + +IK LAD +A ++ + D P E+I + W +
Sbjct: 1380 KPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------------------WTM 1414
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+ + G+G G ++++P G + + + F ++N+AEYEA + G+ AI L IK L
Sbjct: 1415 HFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRL 1474
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+ GDS LV+NQ+ EW ++ Y+ R+L F+ +EL H+ R N+ AD LA
Sbjct: 1475 IVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANF 1534
Query: 242 SSMYQVNRWNEVPLIHIRHLERPA--HVFAIEE------VVDDKPWFHDIKCFLQRQEYP 293
S R + + HL P H ++ + + W FL QE P
Sbjct: 1535 GS----KRETAPSDVFVEHLYTPTVPHKDTTQDADTRNIAMVEADWREPFIRFLTSQELP 1590
Query: 294 LGASNKDK-KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGTHS 352
+KD+ + + R S + L+ LYK++ +L RCV E L+ +IH G G H+
Sbjct: 1591 ---QDKDEAERISRRSKLYVLHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHA 1647
Query: 353 SGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPFSMWG 412
+ T+ K R G++W T +D K + C CQ +A +IH+P L + WPF++WG
Sbjct: 1648 AARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWG 1707
Query: 413 IDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPSRI 472
+DM+G + KA G+ + VAID F+KW+EA +T F N I+ R+GVP+RI
Sbjct: 1708 LDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRI 1765
Query: 473 ITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVT 527
ITDNGT + K+ C+DF I+ +S P NG VE AN I ++ ++
Sbjct: 1766 ITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPY 1825
Query: 528 YKDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEW 587
W + LP L RT+ +TG +PF LVYG EA+LP EVE S+R E +
Sbjct: 1826 AGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERY 1882
Query: 588 VQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQPDSR 647
+ R D L+ +EE R +AL Y + ++ ++ V R F GDLVL+KI T + R
Sbjct: 1883 EEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DR 1940
Query: 648 GKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
K +P +EGP+++ + G+ L+ DG + N + +++++
Sbjct: 1941 HKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1985
>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
Length = 2013
Score = 357 bits (916), Expect = 7e-97
Identities = 223/709 (31%), Positives = 354/709 (49%), Gaps = 62/709 (8%)
Query: 2 LEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEY 61
++K + ++L HY H+ +++ P+ I + GRIA+W + L DI +
Sbjct: 1348 VQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREVNGRIAKWALELMSLDISF 1406
Query: 62 RSQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLGEGPDPESRWGL 121
+ + +IK LAD +A + +C E E + W +
Sbjct: 1407 KPRISIKSQALADFVA----------------------EWTECQEDTPAENME---HWTM 1441
Query: 122 IFDGAVNVYGSGIGAIIVTPEGAHIPFTARLTFDCTNNIAEYEACIMGIEEAIDLRIKNL 181
FDG+ + G+G G ++++P G + + + F ++N+AEYEA + G+ AI L IK L
Sbjct: 1442 HFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRL 1501
Query: 182 DIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRDENQMADALATL 241
+ GDS LV+NQ+ EW ++ Y+ R+L F+ +EL H+ R N+ AD LA
Sbjct: 1502 IVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANF 1561
Query: 242 SSMYQVNRWNEVPLIHIRHLERP------------AHVFAIEEVVDDKPWFHDIKCFLQR 289
S + + + + HL P H A+ EV W + FL
Sbjct: 1562 GSKREAAPSD----VFVEHLYTPTVPHKDTTQVAGTHDAAMVEV----DWREPLIRFLTS 1613
Query: 290 QEYPLGASNKDK-KTLRRLSGNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSF 348
QE P +KD+ + + R S + L+ LYK++ +L RCV E L+ +IH G
Sbjct: 1614 QELP---QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGIC 1670
Query: 349 GTHSSGPTMAKKMLRAGYYWMTMEADCYKHAKRCYKCQIYADRIHVPPTALNVLSSPWPF 408
G H++ T+ K R G++W T +D K + C CQ +A +IH+P L + WPF
Sbjct: 1671 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPF 1730
Query: 409 SMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGV 468
++WG+DM+G + KA G+ + VAID F+KW+EA +T F N I+ R+GV
Sbjct: 1731 AVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGV 1788
Query: 469 PSRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KKIIQK 523
P+RIITDNGT + K+ C+DF I+ +S P NG VE AN I ++ +
Sbjct: 1789 PNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDR 1848
Query: 524 MVVTYKDWHEMLPFALHGYRTSIRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELS 583
+ W + LP L RT+ +TG +PF LVYG EA+LP EVE S+R
Sbjct: 1849 LKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFR 1905
Query: 584 EAEWVQSRYDQLNLIEEKRMSALCHGQLYQKRMKHAFDKKVHPREFKEGDLVLKKILTFQ 643
E + + R D L+ +EE R +AL Y + ++ ++ V R F GDLVL+KI T +
Sbjct: 1906 EERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR 1965
Query: 644 PDSRGKWTPNYEGPYVVKKAYSGGAMTLQTMDGEELQRPVNTDAVKKYF 692
R K +P +EGP+++ + G+ L+ DG + N + +++++
Sbjct: 1966 --DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2012
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,234,909,243
Number of Sequences: 2790947
Number of extensions: 53518626
Number of successful extensions: 120889
Number of sequences better than 10.0: 4417
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 707
Number of HSP's that attempted gapping in prelim test: 110314
Number of HSP's gapped (non-prelim): 6312
length of query: 693
length of database: 848,049,833
effective HSP length: 134
effective length of query: 559
effective length of database: 474,062,935
effective search space: 265001180665
effective search space used: 265001180665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)
Medicago: description of AC148653.1