BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148483.6 + phase: 0
(125 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FV53 Peptide deformylase, mitochondrial precursor [A... 90 1e-17
UniRef100_Q8RUJ3 Peptide deformylase-like protein [Oryza sativa] 84 7e-16
UniRef100_Q9FUZ0 Peptide deformylase, mitochondrial precursor [L... 84 7e-16
UniRef100_Q8INL3 CG31373-PA [Drosophila melanogaster] 58 6e-08
UniRef100_Q7NJV3 Peptide deformylase 1 [Gloeobacter violaceus] 57 7e-08
UniRef100_UPI0000017B99 UPI0000017B99 UniRef100 entry 55 3e-07
UniRef100_UPI00002484BE UPI00002484BE UniRef100 entry 55 5e-07
UniRef100_Q608W7 Polypeptide deformylase [Methylococcus capsulatus] 55 5e-07
UniRef100_UPI0000436F74 UPI0000436F74 UniRef100 entry 52 2e-06
UniRef100_UPI00001D1446 UPI00001D1446 UniRef100 entry 52 2e-06
UniRef100_UPI00003374D4 UPI00003374D4 UniRef100 entry 52 3e-06
UniRef100_UPI0000334355 UPI0000334355 UniRef100 entry 52 4e-06
UniRef100_UPI00002B2DF5 UPI00002B2DF5 UniRef100 entry 52 4e-06
UniRef100_Q826Q0 Peptide deformylase 2 [Streptomyces avermitilis] 50 1e-05
UniRef100_Q9VGY2 CG31278-PA [Drosophila melanogaster] 50 2e-05
UniRef100_Q93LE9 Peptide deformylase [Leptospira interrogans] 50 2e-05
UniRef100_Q8REF0 Peptide deformylase [Fusobacterium nucleatum] 50 2e-05
UniRef100_UPI00002C7612 UPI00002C7612 UniRef100 entry 49 2e-05
UniRef100_UPI0000026615 UPI0000026615 UniRef100 entry 49 3e-05
UniRef100_Q7QFS8 ENSANGP00000017891 [Anopheles gambiae str. PEST] 49 3e-05
>UniRef100_Q9FV53 Peptide deformylase, mitochondrial precursor [Arabidopsis thaliana]
Length = 259
Score = 89.7 bits (221), Expect = 1e-17
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 28 SSSSCNNKIQLSSTKFSKFGSTLSSPSSETALLRKTVNKLPYIVKAGDPVIHEPAREVDH 87
SS N K+ T S ST + +K V+ LP IV +GDPV+HE AREVD
Sbjct: 32 SSHLLNRKLYNLPTSSSSSLSTKAGWLLGLGEKKKKVD-LPEIVASGDPVLHEKAREVDP 90
Query: 88 SEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
EI S++IQ IIDDMI VMR APGVG+AAPQIG+PLR+
Sbjct: 91 GEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRI 128
>UniRef100_Q8RUJ3 Peptide deformylase-like protein [Oryza sativa]
Length = 246
Score = 84.0 bits (206), Expect = 7e-16
Identities = 37/58 (63%), Positives = 49/58 (83%)
Query: 68 PYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
P VKAGDPV+HEPA++V +I S+K+Q +ID M+ VMRKAPGVG+AAPQIG+PL++
Sbjct: 72 PGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPLKI 129
>UniRef100_Q9FUZ0 Peptide deformylase, mitochondrial precursor [Lycopersicon
esculentum]
Length = 277
Score = 84.0 bits (206), Expect = 7e-16
Identities = 38/64 (59%), Positives = 52/64 (80%)
Query: 62 KTVNKLPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGI 121
K +P IVKAGDPV+HEP++++ EI S++IQ II++M+ VMR APGVG+AAPQIGI
Sbjct: 83 KKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVKVMRNAPGVGLAAPQIGI 142
Query: 122 PLRV 125
PL++
Sbjct: 143 PLKI 146
>UniRef100_Q8INL3 CG31373-PA [Drosophila melanogaster]
Length = 196
Score = 57.8 bits (138), Expect = 6e-08
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
+ + GDPV+ + A EV +I S +I IID M+ V+R VGVAAPQ+GIPLR+
Sbjct: 8 HFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRI 64
>UniRef100_Q7NJV3 Peptide deformylase 1 [Gloeobacter violaceus]
Length = 227
Score = 57.4 bits (137), Expect = 7e-08
Identities = 27/56 (48%), Positives = 41/56 (73%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
IVK GDPV+ A+ ++ EI+S+ IQ +I M MR+APGVG+AAPQ+G+ +++
Sbjct: 48 IVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQL 103
>UniRef100_UPI0000017B99 UPI0000017B99 UniRef100 entry
Length = 198
Score = 55.5 bits (132), Expect = 3e-07
Identities = 25/57 (43%), Positives = 39/57 (67%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
++ + GDPV+ A VD + I+ +IQ I+ ++ VMRK VG++APQIG+PLR+
Sbjct: 21 HVCQVGDPVLRSRAAAVDPAAIRGAEIQKTINTLVKVMRKLDCVGLSAPQIGVPLRI 77
>UniRef100_UPI00002484BE UPI00002484BE UniRef100 entry
Length = 194
Score = 54.7 bits (130), Expect = 5e-07
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
++ + GDPV+ A +V+ I+ ++Q +I ++ VMRK VG++APQIG+PLR+
Sbjct: 21 HVCQVGDPVLRSHAAKVEPGAIQGPEVQKVIKTLVKVMRKLECVGLSAPQIGVPLRI 77
>UniRef100_Q608W7 Polypeptide deformylase [Methylococcus capsulatus]
Length = 191
Score = 54.7 bits (130), Expect = 5e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
IV+AG+PV+ + AR + EI+S +Q +I M MR APGVG+AAPQIG L++
Sbjct: 10 IVQAGEPVLRQRARPLSPEEIRSAAVQALIGHMRETMRDAPGVGLAAPQIGQGLQL 65
>UniRef100_UPI0000436F74 UPI0000436F74 UniRef100 entry
Length = 198
Score = 52.4 bits (124), Expect = 2e-06
Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
++ + GDPV+ A EV+ + I+ ++Q +I ++ VMRK VG++APQIG+PLR+
Sbjct: 22 HVCQVGDPVLRSHAAEVEGA-IQGPEVQKVIKTLVKVMRKLECVGLSAPQIGVPLRI 77
>UniRef100_UPI00001D1446 UPI00001D1446 UniRef100 entry
Length = 231
Score = 52.4 bits (124), Expect = 2e-06
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 24 VSLSSSSSCNNKIQLSSTKFSKFGSTLSSPSSETALLRKTVNKLPY-----IVKAGDPVI 78
V+LS SC++ L ++ S LR+ V P + + GDPV+
Sbjct: 13 VTLSRGQSCSSSASLEGAARTR---------SYWRYLRRLVRGAPQPPYTRVCQVGDPVL 63
Query: 79 HEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
A V+ ++ ++Q +++ ++ VMR+ VG++APQ+G+PL+V
Sbjct: 64 RTVAAPVEPKQLAGPELQRLVEQLVQVMRRRGCVGLSAPQLGVPLQV 110
>UniRef100_UPI00003374D4 UPI00003374D4 UniRef100 entry
Length = 198
Score = 52.0 bits (123), Expect = 3e-06
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 59 LLRKTVNKLPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQ 118
L+ V ++ + GDPV+ A VD + ++Q ++ ++ VMR+ VG++APQ
Sbjct: 11 LIPPPVPPYKHVCQVGDPVLRSRAAPVDPGAVGGAEVQKVVHTLVKVMRELDCVGLSAPQ 70
Query: 119 IGIPLRV 125
IG+PLR+
Sbjct: 71 IGVPLRI 77
>UniRef100_UPI0000334355 UPI0000334355 UniRef100 entry
Length = 186
Score = 51.6 bits (122), Expect = 4e-06
Identities = 24/56 (42%), Positives = 40/56 (70%), Gaps = 3/56 (5%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
I+K +P++ + ++ VD + D+I+ ++DDM+ M APG+G+AA QIGIPLR+
Sbjct: 6 IIKVPNPILKKVSKPVD---VVDDEIRKVLDDMLDTMYDAPGIGLAAIQIGIPLRM 58
>UniRef100_UPI00002B2DF5 UPI00002B2DF5 UniRef100 entry
Length = 186
Score = 51.6 bits (122), Expect = 4e-06
Identities = 25/56 (44%), Positives = 40/56 (70%), Gaps = 3/56 (5%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
I+K +P++ + ++ VD + D+I+ I+DDM+ M APG+G+AA QIGIPLR+
Sbjct: 6 IIKVPNPILKKVSKPVDQVD---DEIRGILDDMLDTMYDAPGIGLAAIQIGIPLRM 58
>UniRef100_Q826Q0 Peptide deformylase 2 [Streptomyces avermitilis]
Length = 186
Score = 50.1 bits (118), Expect = 1e-05
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 74 GDPVIHEPAREV-DHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
GDPV+H P EV DH ++ +++DM M A GVG+AA QIG+PLRV
Sbjct: 20 GDPVLHAPCEEVTDHGP----ELARLVEDMFATMYAANGVGLAANQIGVPLRV 68
>UniRef100_Q9VGY2 CG31278-PA [Drosophila melanogaster]
Length = 238
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
+ + GDPV+ + A V + S +I+ I++ M+ V+RK VG+AAPQIG+ LR+
Sbjct: 50 HFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDCVGIAAPQIGVSLRI 106
>UniRef100_Q93LE9 Peptide deformylase [Leptospira interrogans]
Length = 178
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGI 121
I++ GDP++ + + V EI++ + + +I DM MR A GVG+AAPQIGI
Sbjct: 6 ILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGI 57
>UniRef100_Q8REF0 Peptide deformylase [Fusobacterium nucleatum]
Length = 174
Score = 49.7 bits (117), Expect = 2e-05
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
I K G+ V+ + A+EV+ SEI +D+ + +DDM+ M + GVG+AAPQIG+ R+
Sbjct: 5 IKKYGEDVLKQIAKEVELSEI-NDEFRQFLDDMVETMYETDGVGLAAPQIGVSKRI 59
>UniRef100_UPI00002C7612 UPI00002C7612 UniRef100 entry
Length = 178
Score = 49.3 bits (116), Expect = 2e-05
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 70 IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
I+ A DP + + ++ VD + +IQ+++DDM+ M APG+G+AA QIG+PLRV
Sbjct: 6 ILTAPDPFLKQISKPVDSV---TKEIQDLMDDMLETMYDAPGIGLAAVQIGVPLRV 58
>UniRef100_UPI0000026615 UPI0000026615 UniRef100 entry
Length = 175
Score = 48.9 bits (115), Expect = 3e-05
Identities = 20/57 (35%), Positives = 38/57 (66%)
Query: 69 YIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRV 125
++ + GDPV+ A V+ ++ ++Q ++ M+ VMR+ VG++APQ+G+PL+V
Sbjct: 12 HVCQVGDPVLRVVAAPVEPEQLAGPELQRLVGRMVQVMRRRGCVGLSAPQLGVPLQV 68
>UniRef100_Q7QFS8 ENSANGP00000017891 [Anopheles gambiae str. PEST]
Length = 240
Score = 48.9 bits (115), Expect = 3e-05
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 62 KTVNKLPY--IVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQI 119
K+ ++ PY IV+ GDPV+ PA + E++S ++Q + + VMR VG+AAPQ+
Sbjct: 43 KSNDEPPYDHIVQLGDPVLRVPANAIPEKELQSAEVQYLARHLTKVMRAYRCVGLAAPQL 102
Query: 120 GIPLR 124
G+ LR
Sbjct: 103 GLSLR 107
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.132 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,225,849
Number of Sequences: 2790947
Number of extensions: 6720362
Number of successful extensions: 24250
Number of sequences better than 10.0: 533
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 23790
Number of HSP's gapped (non-prelim): 551
length of query: 125
length of database: 848,049,833
effective HSP length: 101
effective length of query: 24
effective length of database: 566,164,186
effective search space: 13587940464
effective search space used: 13587940464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148483.6