BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148395.5 - phase: 0
(130 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LKR9 Hypothetical protein T15F17.a [Arabidopsis thal... 96 2e-19
UniRef100_O65226 F7N22.15 protein [Arabidopsis thaliana] 95 3e-19
UniRef100_Q96467 Hypothetical protein [Hordeum vulgare] 93 1e-18
UniRef100_Q9SKF2 Putative Athila retroelement ORF1 protein [Arab... 93 2e-18
UniRef100_Q9LPB1 T32E20.9 [Arabidopsis thaliana] 93 2e-18
UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis ... 92 3e-18
UniRef100_Q9SK59 Putative Athila retroelement ORF1 protein [Arab... 92 3e-18
UniRef100_Q9LKS4 Hypothetical protein T15F17.d [Arabidopsis thal... 92 3e-18
UniRef100_Q8S8J9 Putative Athila retroelement ORF1 protein [Arab... 91 4e-18
UniRef100_Q9M0T9 Putative athila transposon protein [Arabidopsis... 91 6e-18
UniRef100_Q9LKS8 Hypothetical protein T15F17.m [Arabidopsis thal... 91 6e-18
UniRef100_Q9ZPG6 F5K24.5 protein [Arabidopsis thaliana] 91 8e-18
UniRef100_Q9SKR9 Putative Athila retroelement ORF1 protein [Arab... 89 2e-17
UniRef100_Q7FZN4 T17A2.3 protein [Arabidopsis thaliana] 89 3e-17
UniRef100_Q9MA70 F2J6.11 protein [Arabidopsis thaliana] 88 5e-17
UniRef100_Q9SJS1 Putative Athila retroelement ORF1 protein [Arab... 87 6e-17
UniRef100_Q9MA68 F2J6.13 protein [Arabidopsis thaliana] 87 1e-16
UniRef100_O82611 T5H22.4 protein [Arabidopsis thaliana] 86 1e-16
UniRef100_Q9ZQ08 Putative Athila retroelement ORF1 protein [Arab... 86 2e-16
UniRef100_Q7XP77 OSJNBa0021F22.23 protein [Oryza sativa] 80 1e-14
>UniRef100_Q9LKR9 Hypothetical protein T15F17.a [Arabidopsis thaliana]
Length = 703
Score = 95.9 bits (237), Expect = 2e-19
Identities = 48/105 (45%), Positives = 63/105 (59%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L+ +VQ N+F LP EDP H+ F RL K N
Sbjct: 20 PRNHNQRNGIVPPPVQNNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W SLP GSIT W+ ++AFLA+
Sbjct: 80 GVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAK 124
>UniRef100_O65226 F7N22.15 protein [Arabidopsis thaliana]
Length = 589
Score = 95.1 bits (235), Expect = 3e-19
Identities = 48/106 (45%), Positives = 65/106 (61%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L++++Q N+F LP EDP H+ +F RL G K N
Sbjct: 28 PRNHHQRQGIVPPPVQNNNFEIKIGLISMIQGNKFHGLPMEDPLDHLDSFDRLCGLTKIN 87
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLARS 118
GVT + +L LF F L D+A W +LP SIT WD ++AFLA+S
Sbjct: 88 GVTEDMFKLRLFSFSLGDKAHHWEKTLPPDSITSWDDCKKAFLAKS 133
>UniRef100_Q96467 Hypothetical protein [Hordeum vulgare]
Length = 337
Score = 93.2 bits (230), Expect = 1e-18
Identities = 45/120 (37%), Positives = 70/120 (57%)
Query: 1 MAEEHTLKEYATPSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHIS 60
M E L +++ + + + + P +A +++I ALLN+V + QF LP+ED H++
Sbjct: 1 MNENTKLCDFSNTNNNDFISTPIAPATNAESYEINAALLNLVMKEQFSGLPSEDVASHLN 60
Query: 61 TFLRLSGTLKSNGVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLARSSP 120
TF+ L K V + I+L LFPF LRDRA WF SLP SI WD+ + A++++ P
Sbjct: 61 TFIELCDMQKKKDVDNDVIKLKLFPFSLRDRAKTWFSSLPKSSIDSWDKCKDAYISKYFP 120
>UniRef100_Q9SKF2 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 622
Score = 92.8 bits (229), Expect = 2e-18
Identities = 45/105 (42%), Positives = 66/105 (62%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P+ + I P ++ NNF+IK +L+N+VQ ++F L EDP H+ F L T+K N
Sbjct: 38 PNIRGNRNGIQAPPVENNNFEIKSSLINMVQTSKFHGLSMEDPLDHLEQFDMLCSTVKIN 97
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
G++ + +L LFPF L DRA W +LP SIT WDQ ++AFL++
Sbjct: 98 GISEDAFKLRLFPFSLGDRARIWEKNLPQRSITSWDQCKRAFLSK 142
>UniRef100_Q9LPB1 T32E20.9 [Arabidopsis thaliana]
Length = 1586
Score = 92.8 bits (229), Expect = 2e-18
Identities = 47/105 (44%), Positives = 62/105 (58%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L+ +VQ N+F LP EDP H+ F RL K N
Sbjct: 52 PRNHNQRNGIVPPPVQNNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKIN 111
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
V+ + +L LFPF L D+A W SLP GSIT W+ ++AFLA+
Sbjct: 112 RVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAK 156
>UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1864
Score = 92.0 bits (227), Expect = 3e-18
Identities = 47/105 (44%), Positives = 62/105 (58%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L+ +VQ N+F LP EDP H+ F RL K N
Sbjct: 52 PRNHNQRNGIVPPPVQNNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKIN 111
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W SL GSIT W+ ++AFLA+
Sbjct: 112 GVSEDGFKLRLFPFSLGDKAHQWEKSLLQGSITSWNDCKKAFLAK 156
>UniRef100_Q9SK59 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 277
Score = 91.7 bits (226), Expect = 3e-18
Identities = 44/105 (41%), Positives = 64/105 (60%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L++++Q N+F LP +DP H+ +F RL G N
Sbjct: 72 PRNHHQRQGIVPPPVQNNNFEIKSGLISMIQGNKFHGLPMKDPLDHLDSFDRLCGLTNIN 131
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GVT + + LFPF + D+A W +LP+ SIT WD ++AFLA+
Sbjct: 132 GVTEDMFKQRLFPFSVGDKAHHWEKTLPSDSITSWDDCKKAFLAK 176
>UniRef100_Q9LKS4 Hypothetical protein T15F17.d [Arabidopsis thaliana]
Length = 677
Score = 91.7 bits (226), Expect = 3e-18
Identities = 45/105 (42%), Positives = 63/105 (59%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + I P I NNF+IK L++++Q N+F LP EDP H+ F RL K N
Sbjct: 20 PRDHRQRKGIAPPAIQNNNFEIKSGLISMIQGNKFHGLPMEDPLDHLDEFNRLYNLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W +LP+ SIT WD ++AFL++
Sbjct: 80 GVSEDGFKLRLFPFSLGDKAHMWEKNLPHDSITTWDDCKKAFLSK 124
>UniRef100_Q8S8J9 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 1012
Score = 91.3 bits (225), Expect = 4e-18
Identities = 47/105 (44%), Positives = 62/105 (58%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P I NNF IK L++++Q N+F LP EDP H+ F RL K N
Sbjct: 15 PRNHHQRAGIVPPPIQNNNFKIKSDLISMIQGNKFHGLPMEDPLDHLDNFDRLCSLTKIN 74
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ E+ +L LFPF L D+A W +LP SI WD ++AFLA+
Sbjct: 75 GVSEESFKLRLFPFSLGDKAHLWEKTLPVKSIDTWDDCKKAFLAK 119
>UniRef100_Q9M0T9 Putative athila transposon protein [Arabidopsis thaliana]
Length = 866
Score = 90.9 bits (224), Expect = 6e-18
Identities = 44/105 (41%), Positives = 63/105 (59%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + I P I NNF+IK L++++Q N+F+ LP EDP H+ F RL K N
Sbjct: 20 PRDHRQREGIAPPAIQNNNFEIKSGLISMIQGNKFYGLPMEDPLDHLDEFDRLCNLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W +LP+ SI WD ++AFL++
Sbjct: 80 GVSADGFKLRLFPFSLGDKAHIWEKNLPHDSIITWDDCKKAFLSK 124
>UniRef100_Q9LKS8 Hypothetical protein T15F17.m [Arabidopsis thaliana]
Length = 346
Score = 90.9 bits (224), Expect = 6e-18
Identities = 46/105 (43%), Positives = 61/105 (57%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF IK +L+ +VQ N+F LP EDP H+ F RL K N
Sbjct: 20 PHNHNQRHGIVPPPVQNNNFKIKSSLIAMVQGNKFHGLPMEDPLDHLDEFERLCDLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W +LP GSIT WD ++ FL +
Sbjct: 80 GVSEDGFKLRLFPFSLGDKAHLWEKTLPQGSITTWDDCKKVFLEK 124
>UniRef100_Q9ZPG6 F5K24.5 protein [Arabidopsis thaliana]
Length = 446
Score = 90.5 bits (223), Expect = 8e-18
Identities = 45/105 (42%), Positives = 63/105 (59%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+I L++++Q N+F LP EDP ++ +F RL G K N
Sbjct: 28 PRNHHQRQGIVPPPVQINNFEIMSGLISMIQGNKFHGLPKEDPLDNLDSFDRLCGLTKIN 87
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GVT + +L LFPF L D+A W +LP SIT WD ++ FLA+
Sbjct: 88 GVTKDMFKLRLFPFSLGDKAHHWKKTLPPDSITSWDDCKKDFLAK 132
>UniRef100_Q9SKR9 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 929
Score = 89.0 bits (219), Expect = 2e-17
Identities = 46/105 (43%), Positives = 59/105 (55%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV + NNF IK L+ +VQ N+F LP EDP H+ RL G K N
Sbjct: 52 PHNHNQRHGIVLRPVQNNNFKIKSGLIAMVQGNKFHGLPMEDPLDHLDELERLCGLTKIN 111
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W +LP SIT WD + AFLA+
Sbjct: 112 GVSEDGFKLRLFPFSLGDKAHLWEKTLPKNSITTWDDCKMAFLAK 156
>UniRef100_Q7FZN4 T17A2.3 protein [Arabidopsis thaliana]
Length = 1428
Score = 88.6 bits (218), Expect = 3e-17
Identities = 44/105 (41%), Positives = 62/105 (58%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + I P I NNF+IK L++++Q N+F LP EDP H+ F RL K N
Sbjct: 20 PRDHRQRKGIAPPAIQNNNFEIKSGLISMIQGNKFHGLPMEDPLDHLDEFDRLCNLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + +L LFPF L D+A W +L + SIT WD ++AFL++
Sbjct: 80 GVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSITTWDDYKKAFLSK 124
>UniRef100_Q9MA70 F2J6.11 protein [Arabidopsis thaliana]
Length = 823
Score = 87.8 bits (216), Expect = 5e-17
Identities = 44/105 (41%), Positives = 62/105 (58%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P I NNF+IK L++++Q N+F LP EDP H+ F RL K N
Sbjct: 56 PRNHHQRAGIVPPPIQNNNFEIKSGLISMIQSNKFHGLPMEDPLDHLDNFDRLCSLTKIN 115
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ ++ +L LFPF L D+A W +LP S+ D ++AFLA+
Sbjct: 116 GVSEDSFKLRLFPFSLGDKAHLWEKTLPVDSVDTLDDCKKAFLAK 160
>UniRef100_Q9SJS1 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 733
Score = 87.4 bits (215), Expect = 6e-17
Identities = 43/96 (44%), Positives = 58/96 (59%)
Query: 22 IVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSNGVTPETIRL 81
I P I NNF+IK L++++Q N+F LP EDP H+ F RL K NGV + L
Sbjct: 29 IAPPVIQNNNFEIKSGLISMIQGNKFHGLPMEDPLNHLDEFDRLCNLTKINGVIEDGFNL 88
Query: 82 HLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
LFPF L +A W +LP+ SIT WD ++AFL++
Sbjct: 89 RLFPFSLGGKAHIWEKNLPHDSITTWDDCKKAFLSK 124
>UniRef100_Q9MA68 F2J6.13 protein [Arabidopsis thaliana]
Length = 780
Score = 86.7 bits (213), Expect = 1e-16
Identities = 43/105 (40%), Positives = 60/105 (56%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P I NNF+IK L++++Q N+F LP EDP H+ F R K N
Sbjct: 20 PRNHHQRAGIVPPLIQNNNFEIKSGLISMIQSNKFHGLPMEDPLDHLDNFDRFCSLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ ++ +L LFPF L D A W +L S+ WD ++AFLA+
Sbjct: 80 GVSEDSFKLRLFPFSLGDEAHLWEKTLLVDSVDTWDDCKKAFLAK 124
>UniRef100_O82611 T5H22.4 protein [Arabidopsis thaliana]
Length = 1064
Score = 86.3 bits (212), Expect = 1e-16
Identities = 46/108 (42%), Positives = 60/108 (54%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + I P I NNF+IK L++I+Q N+F LP EDP H+ F RL K N
Sbjct: 20 PRDHRQRKGIAPPAIQNNNFEIKSGLISIIQGNKFHGLPMEDPLDHLDEFDRLCNLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLARSSP 120
GV+ + +L LFPF L D+A W +L + SIT W R+ F SSP
Sbjct: 80 GVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSITTWMIARRLFYQSSSP 127
>UniRef100_Q9ZQ08 Putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length = 750
Score = 85.9 bits (211), Expect = 2e-16
Identities = 43/105 (40%), Positives = 58/105 (54%)
Query: 13 PSTEEPQTVIVYPTIDANNFDIKPALLNIVQQNQFFELPTEDPNLHISTFLRLSGTLKSN 72
P + IV P + NNF+IK L+ +VQ N+F LP ED H+ F RL K N
Sbjct: 20 PHNHNQRHGIVLPLVQNNNFEIKSGLIAMVQGNKFHGLPMEDSLDHLDEFERLCDLTKIN 79
Query: 73 GVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLAR 117
GV+ + + LFPF L D+ W +LP SIT WD ++AF A+
Sbjct: 80 GVSEDGFKFRLFPFSLGDKTHLWEKTLPQNSITTWDDCKKAFFAK 124
>UniRef100_Q7XP77 OSJNBa0021F22.23 protein [Oryza sativa]
Length = 489
Score = 79.7 bits (195), Expect = 1e-14
Identities = 43/117 (36%), Positives = 65/117 (54%), Gaps = 6/117 (5%)
Query: 6 TLKEYATPSTEEPQTVIVYPTIDANN--FDIKPALLNIVQQNQFFELPTEDPNLHISTFL 63
TL E+A PST+ V + P ++ + FD+K +L+ + Q + F P ED N H+ FL
Sbjct: 5 TLCEFAAPSTDN---VAIGPQVNIGDVDFDLKSSLITMAQASPFCGKPNEDANAHLQQFL 61
Query: 64 RLSGTLKSNGVTPETIRLHLFPFLLRDRASAWFHSLPNGSITPWDQLRQAFLARSSP 120
+ T GV+P+ +RL LFPF L RA WF++ +I WD+ FL++ P
Sbjct: 62 EICSTYTIKGVSPDAVRLRLFPFSLLGRAKQWFYA-NRVAINTWDKCSTTFLSKFFP 117
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,749,748
Number of Sequences: 2790947
Number of extensions: 8942437
Number of successful extensions: 16504
Number of sequences better than 10.0: 396
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 16122
Number of HSP's gapped (non-prelim): 403
length of query: 130
length of database: 848,049,833
effective HSP length: 106
effective length of query: 24
effective length of database: 552,209,451
effective search space: 13253026824
effective search space used: 13253026824
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148395.5