
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148360.12 + phase: 0 /pseudo
(102 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5ZAG1 Hypothetical protein P0025A05.39-1 [Oryza sativa] 48 6e-05
UniRef100_Q9LYF3 Hypothetical protein T22P22_170 [Arabidopsis th... 47 1e-04
UniRef100_UPI000029C8AE UPI000029C8AE UniRef100 entry 33 1.6
UniRef100_UPI00002EB24C UPI00002EB24C UniRef100 entry 32 2.8
UniRef100_Q97V13 Formate dehydrogenase Alpha subunit [Sulfolobus... 32 3.6
UniRef100_Q82YB6 Putative IS116/IS110/IS902-family transposase [... 32 4.7
UniRef100_UPI000049A390 UPI000049A390 UniRef100 entry 31 6.2
UniRef100_Q7S427 Hypothetical protein [Neurospora crassa] 31 8.1
>UniRef100_Q5ZAG1 Hypothetical protein P0025A05.39-1 [Oryza sativa]
Length = 524
Score = 47.8 bits (112), Expect = 6e-05
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 20/95 (21%)
Query: 1 MQTKVDPPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASV-GGSKSIAL 59
+ T DPP + +W +SA+ F GD+ ++L L+SA +AS +K +AL
Sbjct: 56 LNTYPDPPLEAVWFFSALSF---HDNPGDL-------RSLLHLLSAFTASSRSAAKPLAL 105
Query: 60 LAP---------KAMKEVKSLVDMILGFMSICCSK 85
LAP K +E ++LV+ +L ++SIC S+
Sbjct: 106 LAPVVSELYHSAKPRREAEALVEAVLSYISICSSR 140
>UniRef100_Q9LYF3 Hypothetical protein T22P22_170 [Arabidopsis thaliana]
Length = 494
Score = 46.6 bits (109), Expect = 1e-04
Identities = 31/105 (29%), Positives = 53/105 (49%), Gaps = 14/105 (13%)
Query: 7 PPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAP---- 62
PP +++W YSAI+F K D + + FQLI + S S G K ++LL+P
Sbjct: 57 PPLELVWFYSAIRFYSSKLAFRD--DSVRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQ 114
Query: 63 ------KAMKEVKSLVDMILGFMSICC--SKISEEKDLDLVLSFS 99
++ SL++ I+ ++S+ C +E+ D+ +V FS
Sbjct: 115 LSRLVISRRRDALSLLEGIVSYISMYCVDEPGNEDDDVLMVSGFS 159
>UniRef100_UPI000029C8AE UPI000029C8AE UniRef100 entry
Length = 131
Score = 33.1 bits (74), Expect = 1.6
Identities = 19/58 (32%), Positives = 30/58 (50%)
Query: 40 LFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVLS 97
+F LI + G + S LL + +V + ++ +GF+ I CS I E+ L VLS
Sbjct: 22 IFLLIFSVETIAGDASSETLLLVRGTADVVAASNLGIGFLLIICSSIKEKASLRKVLS 79
>UniRef100_UPI00002EB24C UPI00002EB24C UniRef100 entry
Length = 131
Score = 32.3 bits (72), Expect = 2.8
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 40 LFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVLS 97
+F LI + G + + LL + +V + ++ +GF+ CS I ++K L VLS
Sbjct: 22 IFLLIFSVETIAGNASNETLLLVRGTADVVAASNLGIGFLLFICSSIKDKKSLKKVLS 79
>UniRef100_Q97V13 Formate dehydrogenase Alpha subunit [Sulfolobus solfataricus]
Length = 979
Score = 32.0 bits (71), Expect = 3.6
Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 1/55 (1%)
Query: 42 QLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
+L+ ACS V SI++ + +AM+ K+ + IL + + CS I E + D VL
Sbjct: 59 KLVRACSTRVEDGMSISVNSKRAMEARKTAISRILRYHKLYCS-ICENNNGDCVL 112
>UniRef100_Q82YB6 Putative IS116/IS110/IS902-family transposase [Streptomyces
avermitilis]
Length = 397
Score = 31.6 bits (70), Expect = 4.7
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 37 AKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
AKA + +V G K IA + KEV +L + I G + + E + D+VL
Sbjct: 212 AKAAVEAAERQHTAVAGEKVIAQMVHTLAKEVMALNEKITGTEKLIEGRFREHELADIVL 271
Query: 97 SFSSLG 102
S +G
Sbjct: 272 SMPGMG 277
>UniRef100_UPI000049A390 UPI000049A390 UniRef100 entry
Length = 1194
Score = 31.2 bits (69), Expect = 6.2
Identities = 20/77 (25%), Positives = 39/77 (49%), Gaps = 9/77 (11%)
Query: 22 CRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSI 81
C+ +LK +LE IS A+ + +IS+ + ++ ++ L+ +I F++
Sbjct: 510 CKNNLKNGLLEDISIAERIGGMISSILGQIDNYEN--------KEQQHELITLIFIFINE 561
Query: 82 CC-SKISEEKDLDLVLS 97
C K EK LD++L+
Sbjct: 562 CIEDKKCREKQLDIILN 578
>UniRef100_Q7S427 Hypothetical protein [Neurospora crassa]
Length = 463
Score = 30.8 bits (68), Expect = 8.1
Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 25 SLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDM 74
+L+GD + A+ +F L+ +C+++ G ++++ P+ + E+ SL+D+
Sbjct: 114 ALRGDPV----LARQVFDLVRSCASTESGDEALSSALPQTIPEMLSLIDL 159
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,552,008
Number of Sequences: 2790947
Number of extensions: 4124163
Number of successful extensions: 9967
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9963
Number of HSP's gapped (non-prelim): 8
length of query: 102
length of database: 848,049,833
effective HSP length: 78
effective length of query: 24
effective length of database: 630,355,967
effective search space: 15128543208
effective search space used: 15128543208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148360.12