Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148360.12 + phase: 0 /pseudo
         (102 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q5ZAG1 Hypothetical protein P0025A05.39-1 [Oryza sativa]     48  6e-05
UniRef100_Q9LYF3 Hypothetical protein T22P22_170 [Arabidopsis th...    47  1e-04
UniRef100_UPI000029C8AE UPI000029C8AE UniRef100 entry                  33  1.6
UniRef100_UPI00002EB24C UPI00002EB24C UniRef100 entry                  32  2.8
UniRef100_Q97V13 Formate dehydrogenase Alpha subunit [Sulfolobus...    32  3.6
UniRef100_Q82YB6 Putative IS116/IS110/IS902-family transposase [...    32  4.7
UniRef100_UPI000049A390 UPI000049A390 UniRef100 entry                  31  6.2
UniRef100_Q7S427 Hypothetical protein [Neurospora crassa]              31  8.1

>UniRef100_Q5ZAG1 Hypothetical protein P0025A05.39-1 [Oryza sativa]
          Length = 524

 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 20/95 (21%)

Query: 1   MQTKVDPPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASV-GGSKSIAL 59
           + T  DPP + +W +SA+ F       GD+       ++L  L+SA +AS    +K +AL
Sbjct: 56  LNTYPDPPLEAVWFFSALSF---HDNPGDL-------RSLLHLLSAFTASSRSAAKPLAL 105

Query: 60  LAP---------KAMKEVKSLVDMILGFMSICCSK 85
           LAP         K  +E ++LV+ +L ++SIC S+
Sbjct: 106 LAPVVSELYHSAKPRREAEALVEAVLSYISICSSR 140


>UniRef100_Q9LYF3 Hypothetical protein T22P22_170 [Arabidopsis thaliana]
          Length = 494

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 31/105 (29%), Positives = 53/105 (49%), Gaps = 14/105 (13%)

Query: 7   PPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAP---- 62
           PP +++W YSAI+F   K    D  + +      FQLI + S S  G K ++LL+P    
Sbjct: 57  PPLELVWFYSAIRFYSSKLAFRD--DSVRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQ 114

Query: 63  ------KAMKEVKSLVDMILGFMSICC--SKISEEKDLDLVLSFS 99
                    ++  SL++ I+ ++S+ C     +E+ D+ +V  FS
Sbjct: 115 LSRLVISRRRDALSLLEGIVSYISMYCVDEPGNEDDDVLMVSGFS 159


>UniRef100_UPI000029C8AE UPI000029C8AE UniRef100 entry
          Length = 131

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 19/58 (32%), Positives = 30/58 (50%)

Query: 40 LFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVLS 97
          +F LI +     G + S  LL  +   +V +  ++ +GF+ I CS I E+  L  VLS
Sbjct: 22 IFLLIFSVETIAGDASSETLLLVRGTADVVAASNLGIGFLLIICSSIKEKASLRKVLS 79


>UniRef100_UPI00002EB24C UPI00002EB24C UniRef100 entry
          Length = 131

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 40 LFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVLS 97
          +F LI +     G + +  LL  +   +V +  ++ +GF+   CS I ++K L  VLS
Sbjct: 22 IFLLIFSVETIAGNASNETLLLVRGTADVVAASNLGIGFLLFICSSIKDKKSLKKVLS 79


>UniRef100_Q97V13 Formate dehydrogenase Alpha subunit [Sulfolobus solfataricus]
          Length = 979

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 1/55 (1%)

Query: 42  QLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
           +L+ ACS  V    SI++ + +AM+  K+ +  IL +  + CS I E  + D VL
Sbjct: 59  KLVRACSTRVEDGMSISVNSKRAMEARKTAISRILRYHKLYCS-ICENNNGDCVL 112


>UniRef100_Q82YB6 Putative IS116/IS110/IS902-family transposase [Streptomyces
           avermitilis]
          Length = 397

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 20/66 (30%), Positives = 30/66 (45%)

Query: 37  AKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVL 96
           AKA  +       +V G K IA +     KEV +L + I G   +   +  E +  D+VL
Sbjct: 212 AKAAVEAAERQHTAVAGEKVIAQMVHTLAKEVMALNEKITGTEKLIEGRFREHELADIVL 271

Query: 97  SFSSLG 102
           S   +G
Sbjct: 272 SMPGMG 277


>UniRef100_UPI000049A390 UPI000049A390 UniRef100 entry
          Length = 1194

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 20/77 (25%), Positives = 39/77 (49%), Gaps = 9/77 (11%)

Query: 22  CRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSI 81
           C+ +LK  +LE IS A+ +  +IS+    +   ++         ++   L+ +I  F++ 
Sbjct: 510 CKNNLKNGLLEDISIAERIGGMISSILGQIDNYEN--------KEQQHELITLIFIFINE 561

Query: 82  CC-SKISEEKDLDLVLS 97
           C   K   EK LD++L+
Sbjct: 562 CIEDKKCREKQLDIILN 578


>UniRef100_Q7S427 Hypothetical protein [Neurospora crassa]
          Length = 463

 Score = 30.8 bits (68), Expect = 8.1
 Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 4/50 (8%)

Query: 25  SLKGDILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDM 74
           +L+GD +     A+ +F L+ +C+++  G ++++   P+ + E+ SL+D+
Sbjct: 114 ALRGDPV----LARQVFDLVRSCASTESGDEALSSALPQTIPEMLSLIDL 159


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.321    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,552,008
Number of Sequences: 2790947
Number of extensions: 4124163
Number of successful extensions: 9967
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9963
Number of HSP's gapped (non-prelim): 8
length of query: 102
length of database: 848,049,833
effective HSP length: 78
effective length of query: 24
effective length of database: 630,355,967
effective search space: 15128543208
effective search space used: 15128543208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)


Medicago: description of AC148360.12