BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148359.7 + phase: 0
(789 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum] 1209 0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ... 582 e-164
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum] 517 e-145
UniRef100_Q93Y69 Putative gag-pol [Oryza sativa] 508 e-142
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa... 468 e-130
UniRef100_Q6L974 GAG-POL [Vitis vinifera] 454 e-126
UniRef100_Q40580 Integrase [Nicotiana tabacum] 423 e-117
UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa] 415 e-114
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa] 414 e-114
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa] 414 e-114
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa] 414 e-114
UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa] 413 e-113
UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris] 412 e-113
UniRef100_Q9SSW6 GAG-POL [Oryza sativa] 412 e-113
UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris] 412 e-113
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa] 411 e-113
UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa] 411 e-113
UniRef100_Q60DY3 Putative polyprotein [Oryza sativa] 410 e-113
UniRef100_Q75M60 Putative polyprotein [Oryza sativa] 410 e-113
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa] 410 e-113
>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 1209 bits (3127), Expect = 0.0
Identities = 557/784 (71%), Positives = 678/784 (86%), Gaps = 8/784 (1%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
L KNQ I WND+CQ+AFD IK YL +PPIL+PPV GRPLI+YLSV + S+GCVLG+ DE+
Sbjct: 1486 LRKNQAIKWNDDCQKAFDKIKEYLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDES 1545
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
G+KEHAIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIF
Sbjct: 1546 GRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIF 1605
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
EK +TG++AR QM+L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMY
Sbjct: 1606 EKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMY 1665
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTN 246
LK KDC+EPL+ EGPDP+ KW L+FDGAVN G G+GAV+++P+G H+PF+AR+ F+ TN
Sbjct: 1666 LKMKDCKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTN 1725
Query: 247 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTY 306
N AEYEACI GIEEAID+RIK LDI+GDSALV+NQ+ G+W T+ +LIPYRDY RR+LT+
Sbjct: 1726 NEAEYEACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTF 1785
Query: 307 FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAG 366
F KV+L+H+PRDENQMADALATLSSM +VN WN VP + V RLERP++VFA V
Sbjct: 1786 FKKVKLYHVPRDENQMADALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESV----- 1840
Query: 367 ENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLD-GDILYKRNYDMVLLR 425
V+ KPWYYDIK FL ++EYP GASK DKKTLRRLAG F L+ D+LYKRN+DMVLLR
Sbjct: 1841 --VIDEKPWYYDIKNFLKTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLR 1898
Query: 426 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 485
C+D EA+ LM +VH+G+FGTHA GH M++KLLRAGYYWM ME DC++YARKCHKCQIYA
Sbjct: 1899 CMDRPEADMLMQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYA 1958
Query: 486 DKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 545
D++HVPP LNVM+SPWPF+MWGIDMIG+IEP ASNGHRFILVAIDYFTKWVEAASY N+
Sbjct: 1959 DRVHVPPSPLNVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANI 2018
Query: 546 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 605
TKQVV +FIK IICRYGVP +IITDNG+NLNN +++ LC++FKIEHHNSSPYRP+MNGA
Sbjct: 2019 TKQVVTRFIKKEIICRYGVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGA 2078
Query: 606 VEAANKNIKRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 665
VEAANKNIK+IV+KMV TYK+WHEMLP+ALHGYRT+VR+STGATP+SLVYGMEAVLP+EV
Sbjct: 2079 VEAANKNIKKIVRKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEV 2138
Query: 666 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNPREF 725
EIPSLRV+++ KL EAEW ++R+++L+LIEE+R+ + G YQ RMK AFD+KV PR +
Sbjct: 2139 EIPSLRVLLDVKLDEAEWIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSY 2198
Query: 726 KVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVK 785
++G+LVLKR + D RGKWTPNYEGPYVVKK FSGGAL+LT MDG + P+PVN+D+VK
Sbjct: 2199 QIGDLVLKRILPPGTDNRGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVK 2258
Query: 786 KYFA 789
KYFA
Sbjct: 2259 KYFA 2262
>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0433F09 [Oryza sativa]
Length = 2876
Score = 582 bits (1500), Expect = e-164
Identities = 320/796 (40%), Positives = 460/796 (57%), Gaps = 31/796 (3%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
+ K P VW++ECQ FDSIK YLL PP+L PV+GRPLILY++ S+G +L Q ++
Sbjct: 2097 MKKGTPFVWDEECQNGFDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDE 2156
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
GK E A YYLS+ E Y+ +EK C AL +A K+LRHY++ H LI+R DPI+Y+
Sbjct: 2157 GK-EVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVL 2215
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
+ V+TG++ + +L+ EYDI F QKAIKG LA+ LA P+ D P+ + PDEEI
Sbjct: 2216 SQPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFT 2275
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGA----VNAYGK-----GIGAVIVSPQGHHIPFT 237
+ ++ +W L FDGA +N G G G V +PQG I +
Sbjct: 2276 AELQE--------------QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHS 2321
Query: 238 ARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPY 296
+L E C+NN AEYEA IFG+ A+ M ++ L +GDS L+I QI +E L+PY
Sbjct: 2322 FSLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPY 2381
Query: 297 RDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVF 356
ARRL+ F +E+ H+PR +N ADALA L++ N I+ +R P+ +
Sbjct: 2382 YTVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLE 2441
Query: 357 AIGDVIDQAGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYK 416
I + ++ N + W + P +++ L+R ++ +LYK
Sbjct: 2442 LIPEEVNIIITNSAEEEDWRQPFLDYFKHGSLPE--DPVERRQLQRRLPSYIYKAGVLYK 2499
Query: 417 RNYDM-VLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYA 475
R+Y VLLRCVD EA +++ +VH G G H +G M + GYYW + DC + A
Sbjct: 2500 RSYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTA 2559
Query: 476 RKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTK 535
+ CH CQI+ + H PP L+ WPF WGID+IG I P +S GHRFIL A DYF+K
Sbjct: 2560 KTCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSK 2619
Query: 536 WVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNS 595
W EA V V F++ +II R+GVP +I +DN + + E++KI+ + S
Sbjct: 2620 WAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYS 2679
Query: 596 SPYRPQMNGAVEAANKNIKRIVQKMVTTY-KNWHEMLPYALHGYRTTVRSSTGATPFSLV 654
+ Y PQ NG EA NK + +I++K V + ++WH+ L AL YR TVR+ T ATP+SLV
Sbjct: 2680 TGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLV 2739
Query: 655 YGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKT 714
YG EAVLPLE+++PSLRV + +L++ E + R+ +L+ +EE+R+ A+ Y+ M
Sbjct: 2740 YGNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVR 2799
Query: 715 AFDKKVNPREFKVGE--LVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
A+DK V R F+ GE LVL+R I +GK+ P +EGPYV+++A+ GGA L G
Sbjct: 2800 AYDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQG 2859
Query: 773 VELPNPVNADIVKKYF 788
+ P+N +KKYF
Sbjct: 2860 SQPMPPINGRFLKKYF 2875
>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 517 bits (1332), Expect = e-145
Identities = 236/326 (72%), Positives = 286/326 (87%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
L KNQ I WND+CQ+AFD IK YL +PPIL PPV GRPLI+YLSV + S+GCVLGQ DE+
Sbjct: 1488 LRKNQAIKWNDDCQKAFDKIKEYLQKPPILTPPVPGRPLIMYLSVTENSMGCVLGQHDES 1547
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
G+KEHAIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIF
Sbjct: 1548 GRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIF 1607
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
EK +TG++AR QM+L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMY
Sbjct: 1608 EKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMY 1667
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTN 246
LK KDCEEPL+ EGPDP+ KW L+FDGAVN G G+GAV+++P+G HIPF+AR+ F+ TN
Sbjct: 1668 LKVKDCEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTN 1727
Query: 247 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTY 306
N AEYEACI GIEEAID+RIK LDIYGDSALV+NQ+ G+W T+ +LIPYRDY RR+LT+
Sbjct: 1728 NEAEYEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTF 1787
Query: 307 FTKVELHHIPRDENQMADALATLSSM 332
F KV L+H+PRDENQMADALATLSSM
Sbjct: 1788 FKKVRLYHVPRDENQMADALATLSSM 1813
>UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]
Length = 1262
Score = 508 bits (1309), Expect = e-142
Identities = 280/732 (38%), Positives = 415/732 (56%), Gaps = 39/732 (5%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
+ K P W+ ECQ FDSIK YLL PIL PV+GRPLILY++ SVG +L Q ++
Sbjct: 551 MKKGAPFEWDAECQSGFDSIKRYLLNLPILAAPVKGRPLILYIATQPVSVGALLAQHNDE 610
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
GK E A YYLS+ E Y+ +EK C AL +A K+LRHY++ H LI+ +DPI+Y+
Sbjct: 611 GK-EVACYYLSRTMVGAERNYSPIEKLCLALIFALKKLRHYMLTHQIQLIATVDPIRYVL 669
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
+ ++ G++ + +L+ E+DI + QKA+KG LA+ LA P+ D P+ + PDE++
Sbjct: 670 SQPLLAGRLGKWALLMMEFDITYVPQKAVKGQALAEFLAAHPVPDDSPLITELPDEDVFT 729
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGK---------GIGAVIVSPQGHHIPFT 237
+++ EP W L FDGA G G V +PQG I +
Sbjct: 730 IET----EP----------SWELCFDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHS 775
Query: 238 ARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPY 296
+L E C+NN AEYEA IFG+ A+ M ++ + +YGDS L++ QI +E L+PY
Sbjct: 776 FSLLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPY 835
Query: 297 RDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQR------LE 350
ARRL+ F +E+ H+PR N ADALA L++ + + +R LE
Sbjct: 836 YSAARRLMEMFGHIEVMHVPRSRNAPADALAKLAAALVLPQGGPTQVNVEERWLLPAVLE 895
Query: 351 RPSHVFAIGDVIDQAGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLD 410
+ + + V+ A + W + P + +++ L+R ++
Sbjct: 896 LLPNEYEVDTVMAAAAKE----DDWRVPFLNYFRHGSLPDNSV--ERRQLQRRLPSYVYK 949
Query: 411 GDILYKRNYDM-VLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEH 469
+ Y+R+Y VLLRCVD EA++ + +VH G G H +G M + AGYYW +
Sbjct: 950 SGVSYRRSYGQEVLLRCVDRLEADKALQEVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMA 1009
Query: 470 DCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVA 529
DC + A+ CH CQI+ D H+PP L+ WPF WGID+IG I+P +S GHRFI
Sbjct: 1010 DCLKVAKSCHGCQIHGDFKHLPPVPLHPTVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAI 1069
Query: 530 IDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFK 589
DYF+KW EA S V V F++ +II R+GVP +I +DNG ++ +Q ++K
Sbjct: 1070 TDYFSKWAEAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFKSHKMQRFIAKYK 1129
Query: 590 IEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KNWHEMLPYALHGYRTTVRSSTGA 648
I + S+ Y PQ NG +EA NK + +I++K+V + ++WH+ L AL YR TVR+ T
Sbjct: 1130 IRWNYSTGYYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALWAYRVTVRTPTQC 1189
Query: 649 TPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSY 708
TP+SLVYG EAVLPLEVE+PSLRV + ++++ E + R+ +L+ +EE R+ A+ Y
Sbjct: 1190 TPYSLVYGSEAVLPLEVEVPSLRVAIHEEITQDEQVRLRFQELDTLEEGRLQAVQNLELY 1249
Query: 709 QARMKTAFDKKV 720
+ M A++K V
Sbjct: 1250 RQNMVRAYNKLV 1261
>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
Length = 1580
Score = 468 bits (1205), Expect = e-130
Identities = 274/785 (34%), Positives = 419/785 (52%), Gaps = 61/785 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
L +Q W E Q+A D+IK YL PP+L+PP +G P LYLS D+S+ VL Q E
Sbjct: 847 LKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFRLYLSAGDKSISSVLIQ--EL 904
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
+KE ++YLS++ + ETRY+ +EK C L ++ RLRHYL+++ +I + D +KY+
Sbjct: 905 ERKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRHYLLSNECTVICKADVVKYML 964
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
++ G+I + L+E+D+ +++ KAIKG +A+ + D+ D+ I
Sbjct: 965 SAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV------------DYRDDSI-- 1010
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTN 246
G W L FDG+V +G GIG VI+SP+G F I TN
Sbjct: 1011 -------------GSVEVVPWTLFFDGSVCTHGCGIGLVIISPRGACFEFAYTIKPYATN 1057
Query: 247 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTY 306
N AEYEA + G++ ++ ++I GDS LVI+Q+ GE+E + LI Y + + L+
Sbjct: 1058 NQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEYECKNDTLIVYNEKCQELMRE 1117
Query: 307 FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAG 366
F V L H+ R++N A+ LA +S +++ +IK ++E
Sbjct: 1118 FRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKHVQIEVA-------------- 1156
Query: 367 ENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRC 426
V+ W Y + Q+L S+ + LR A +++L D LY R D VLL+C
Sbjct: 1157 --VITADDWRYYVYQYLQD------PSQSASRKLRYKALKYILLDDELYYRTIDGVLLKC 1208
Query: 427 VDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYAD 486
+ +A+ + +VH+G GTH + H M L AGY+W M DC++Y + C CQ +
Sbjct: 1209 LSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPTMLEDCFRYYKGCQDCQKFGA 1268
Query: 487 KIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 546
P A+N + PWPF WGIDMIG I P +S GH+FILVA DYFTKWVEA V
Sbjct: 1269 IQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFILVATDYFTKWVEAIPLKKVD 1328
Query: 547 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 606
+F++ +II R G+P I TD G+ ++ + I+ NSSPY Q NG
Sbjct: 1329 SGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFADSMGIKLLNSSPYYAQANGQA 1388
Query: 607 EAANKNIKRIVQKMVTTY-KNWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 665
EA+NK++ +++++ ++ Y + WH L AL YR S P+ LVY +A+LP EV
Sbjct: 1389 EASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGSIQVPPYKLVYRHKAILPWEV 1448
Query: 666 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNPREF 725
I S R ++ L+ E+ D+ + + R+ A+A+ + R+ ++KKV P++F
Sbjct: 1449 RIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKVIKDKERVTRHYNKKVVPKDF 1508
Query: 726 KVGELVLK--RRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADI 783
GEL+ K I + GKW+PN+EGP+ + K S GA +L +DG +N
Sbjct: 1509 SEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKGAYMLQGLDGEVYDRALNGKY 1568
Query: 784 VKKYF 788
+KKY+
Sbjct: 1569 LKKYY 1573
>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
Length = 1027
Score = 454 bits (1168), Expect = e-126
Identities = 270/776 (34%), Positives = 415/776 (52%), Gaps = 39/776 (5%)
Query: 15 WNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDETGKKEHAIY 74
W D CQ A + IK+YL++PPIL P+ L +YL+V + ++ VL R + K++ IY
Sbjct: 288 WTDNCQNALERIKHYLMQPPILSSPIPKEKLYMYLAVSEWAISAVLF-RCPSPKEQKPIY 346
Query: 75 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVTGK 134
Y+S+ D ETRY+ +E AL AA++LR Y H +++ P++ I K +TG+
Sbjct: 347 YVSRALADVETRYSKMELISLALRSAAQKLRPYFQAHPVIVLTDQ-PLRNILHKPDLTGR 405
Query: 135 IARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 194
+ + + LSE+ I F+ + ++KG ++AD + +E+ +
Sbjct: 406 MLQWAIELSEFGIEFQPRLSMKGQVMADFV----------LEYS--------------RK 441
Query: 195 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 254
P +EG W L DGA + G G+G ++ SP G H+ R+ F +NN AEYEA
Sbjct: 442 PGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAI 501
Query: 255 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 314
+ G++ A+ + + L I+ DS LV+ ++ E+E A + Y R L FT+ +
Sbjct: 502 LSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEK 561
Query: 315 IPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVGYKP 374
I R +N+ ADALA +++ + +PI VQ S + ++ +
Sbjct: 562 IKRADNRRADALAGIAASLSIKEAILLPI-HVQTNPSVSEISICSTTEAPQADD----QE 616
Query: 375 WYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQ 434
W DI +++ + P G KQ K +R A RF L G LYKR++ LRC+ EA+
Sbjct: 617 WMNDITEYIRTGTLP-GDPKQAHK-VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQY 674
Query: 435 LMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHA 494
++ ++H+G +G H+ G +++ + GYYW M+ + Y ++C KCQ YA H+P
Sbjct: 675 VLAELHEGIYGNHSGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTT 734
Query: 495 LNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFI 554
L +S PWPF+ WG+D++ R P A +F+LVA DYF+KWVEA +Y + + V KF+
Sbjct: 735 LKSISGPWPFAQWGMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFV 793
Query: 555 KNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIK 614
NIICR+G+P II DNG ++ + C E I + S+P PQ NG EA NK +
Sbjct: 794 WKNIICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLI 853
Query: 615 RIVQKMVTTYK-NWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVI 673
++K + K W E LP L YRTT TG TPF+L YGM+AV+P+E+ +P++
Sbjct: 854 TALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT- 912
Query: 674 MEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNPREFKVGELVLK 733
AK S+A R L+ +E R A R YQ R +++KV PR K G LVL+
Sbjct: 913 NAAKQSDANMQLGR--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLR 970
Query: 734 RRISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 788
+ + GK+ N+EGPY+V KA GA L +DG L P N +K+Y+
Sbjct: 971 KFFENTTEVGAGKFQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026
>UniRef100_Q40580 Integrase [Nicotiana tabacum]
Length = 382
Score = 423 bits (1088), Expect = e-117
Identities = 196/342 (57%), Positives = 261/342 (76%), Gaps = 2/342 (0%)
Query: 447 HATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSM 506
H G +S+K+LRAGY+WM ME DC +Y +KCH+CQIYAD + VPP+ LN S+PWPF+
Sbjct: 26 HMNGFVLSKKILRAGYFWMTMETDCIRYVQKCHQCQIYADMMRVPPNKLNATSAPWPFAA 85
Query: 507 WGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPS 566
WG+D+IG IEP ASN H+FILVAIDYFTKWVEAASY VTK+VV F+++ I+CR+ VP
Sbjct: 86 WGMDIIGPIEPTASNWHKFILVAIDYFTKWVEAASYKVVTKKVVTDFVRDCIVCRFEVPE 145
Query: 567 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKN 626
IITDN NL++ +++A+C+ FKI+H NS+ Y PQMNG VEAANKNIK+I++KMV +K
Sbjct: 146 SIITDNAANLHSALMKAMCDTFKIKHKNSTAYMPQMNGVVEAANKNIKKILRKMVDNHKE 205
Query: 627 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQS 686
WHE LP+AL GY T V +S GATP+ LVY EAV+ +EVEI SLR+I E LS+AEW +S
Sbjct: 206 WHEKLPFALLGYCTIVCTSIGATPYLLVYSTEAVIHVEVEITSLRIIQEDVLSDAEWIRS 265
Query: 687 RYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNPREFKVGELVLKRRISQQPDPRGKW 746
RY+QL+LI+ KR+ + G Y RM AF+K+V PR+F G+LVLKR Q + +GK+
Sbjct: 266 RYEQLSLIDGKRV--VCHGQLYHNRMSRAFNKRVKPRQFASGQLVLKRIFPHQDEAKGKF 323
Query: 747 TPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 788
+PN++GPY+V + +GG LIL +DG P P+N+D+VK+Y+
Sbjct: 324 SPNWQGPYMVHRVLTGGTLILAEIDGEVWPKPINSDVVKRYY 365
>UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa]
Length = 1991
Score = 415 bits (1067), Expect = e-114
Identities = 267/797 (33%), Positives = 398/797 (49%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1239 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1298
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1299 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1357
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1358 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1412
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
+ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1413 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1452
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IKHL + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1453 SASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1512
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S R +DV V+ L P+ D
Sbjct: 1513 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPT--VPHKDAT 1566
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R ++L LYK+
Sbjct: 1567 QVAGTHDVAMVEADWRESLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKK 1621
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1622 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1681
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1682 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1740
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F +I+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1741 EAKPVVTITADNARDFF-ISIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASV 1799
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1800 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFF 1859
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ R Y +
Sbjct: 1860 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGL 1916
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1917 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1974
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1975 TLVDNSWNIEHLRRFYA 1991
>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
Length = 2012
Score = 414 bits (1064), Expect = e-114
Identities = 267/797 (33%), Positives = 397/797 (49%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1260 LKKTDSFRWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1319
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1320 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1378
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1379 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1433
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
+ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1434 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1473
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1474 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1533
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S R +DV V+ L P+ D
Sbjct: 1534 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPT--VPHKDAT 1587
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R ++L LYK+
Sbjct: 1588 QAAGAHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKK 1642
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1643 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1702
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1703 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1761
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1762 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASV 1820
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1821 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFF 1880
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ R Y +
Sbjct: 1881 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGL 1937
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1938 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1995
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1996 TLVDNSWNIEHLRRFYA 2012
>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
Length = 2010
Score = 414 bits (1064), Expect = e-114
Identities = 264/797 (33%), Positives = 396/797 (49%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1258 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1317
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1318 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1376
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1377 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1431
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
+ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1432 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1471
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1472 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1531
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1532 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPT--VPHKDTT 1585
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1586 QVAGTHDVAMVETDWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKK 1640
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1641 SPSGILQRCVSLEEGRQLLQDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1700
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1701 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1759
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1760 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASV 1818
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1819 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFF 1878
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ R Y +
Sbjct: 1879 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGL 1935
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1936 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1993
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1994 TLVDNSWNIEHLRRFYA 2010
>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
Length = 2013
Score = 414 bits (1063), Expect = e-114
Identities = 264/795 (33%), Positives = 396/795 (49%), Gaps = 54/795 (6%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1261 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1320
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1321 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1379
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I V G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1380 GDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1434
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
+ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1435 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1474
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1475 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRK 1534
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S R +DV V+ L P+ +
Sbjct: 1535 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQV 1590
Query: 363 DQAGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNY 419
+ + W + +FL S+E P QDK R++ R ++L LYK++
Sbjct: 1591 AGTHDAAMVEVDWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKKSP 1645
Query: 420 DMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCH 479
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1646 SGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCE 1705
Query: 480 KCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA 539
CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1706 GCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEA 1764
Query: 540 ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYR 599
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1765 KPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAH 1823
Query: 600 PQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFSLV 654
P NG VE AN I R+ ++ W + LP L RTT +TG +PF LV
Sbjct: 1824 PMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLV 1883
Query: 655 YGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKT 714
YG EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++
Sbjct: 1884 YGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRR 1940
Query: 715 AFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVE 774
++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1941 YHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTL 1998
Query: 775 LPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1999 VDNSWNIEHLRRFYA 2013
>UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa]
Length = 1995
Score = 413 bits (1061), Expect = e-113
Identities = 263/797 (32%), Positives = 396/797 (48%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1243 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1302
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1303 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1361
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1362 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1416
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1417 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1456
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1457 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1516
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD L S V + + V+ L P+ D
Sbjct: 1517 LEDKFDGLELSHVLRHNNEAADRLVNFGSKREVAPSD----VFVEHLYTPT--VPHKDTT 1570
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1571 QAAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKK 1625
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1626 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1685
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1686 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1744
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1745 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASV 1803
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1804 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFF 1863
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ R Y +
Sbjct: 1864 LVYGAEAMLPSEVEFESLRF---RNFHEDRYEEDRVDDLHRLEEVREAALIRSARYLQGL 1920
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1921 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1978
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1979 TLVDNSWNIEHLRRFYA 1995
>UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 412 bits (1060), Expect = e-113
Identities = 256/787 (32%), Positives = 419/787 (52%), Gaps = 56/787 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
L N+ W +E + AF +IK +L + P + P EG L LY+S ++V VL E
Sbjct: 28 LRGNKTFTWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVL--LVER 85
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
K + IY++S + E RY +LEK A+ AA++LR Y HT ++S P++
Sbjct: 86 IKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKAL 144
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
+K +G++ R + LSE+++ +K + AIK LAD + +E + +EE
Sbjct: 145 QKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEEEE--- 191
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTN 246
+P W L DG+ G G G ++ SP+G+ F I F+ +N
Sbjct: 192 ---------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASN 234
Query: 247 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTY 306
N AEYEA I GI+ + K + + DS LV +QI+GE+E + Y + L
Sbjct: 235 NEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQ 294
Query: 307 FTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQ 364
+E+ +PR +N ADAL+ L+S + +N V +++ + +++ +
Sbjct: 295 LISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC------- 347
Query: 365 AGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLL 424
V K WY DI+++ L+ + P + K ++R + +++ LYKR+ LL
Sbjct: 348 ----VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLL 401
Query: 425 RCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIY 484
RC E E M + +G G H G +S +++R G YW M DC +Y +KC KCQ +
Sbjct: 402 RCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKF 461
Query: 485 ADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 544
A ++ P + L + +P PF+ WG+D++G AS G ++++VA+DYFTKW+EA
Sbjct: 462 APVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKF 520
Query: 545 VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNG 604
+ + V FI NII R+G+P I+ D+GT + + ++ C EFKI+ +++ PQ NG
Sbjct: 521 IKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNG 580
Query: 605 AVEAANKNIKRIVQKMVTTYKN-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPL 663
EAANK I +QK + +K W +++P L RTT + +TG +PFSL +G EAV+P+
Sbjct: 581 QAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPI 640
Query: 664 EVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNP 722
EV +PS RV + +++E Q + L+ + E R+ A + + + RM ++++V
Sbjct: 641 EVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRH 696
Query: 723 REFKVGELVLKRRIS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNA 781
R G+LVL+R + + + GK+T N+EGPY + + + G+ L ++G L N NA
Sbjct: 697 RPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNA 756
Query: 782 DIVKKYF 788
D++KKYF
Sbjct: 757 DVLKKYF 763
>UniRef100_Q9SSW6 GAG-POL [Oryza sativa]
Length = 1032
Score = 412 bits (1058), Expect = e-113
Identities = 259/792 (32%), Positives = 395/792 (49%), Gaps = 48/792 (6%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 280 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 339
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 340 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 398
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 399 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 453
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 454 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 493
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 494 STSHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 553
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S R +DV V+ L P+ +
Sbjct: 554 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQV 609
Query: 363 DQAGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMV 422
+ + W + +FL S+E P K + + + R + +++ LYK++ +
Sbjct: 610 ADTHDIAMVEADWREPLIRFLTSQELP--RDKDEAERISRRSKLYVMHEAELYKKSPSGI 667
Query: 423 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQ 482
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 668 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 727
Query: 483 IYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 542
+A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 728 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 786
Query: 543 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 602
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 787 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 845
Query: 603 NGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 657
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 846 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 905
Query: 658 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFD 717
EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++ +
Sbjct: 906 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHN 962
Query: 718 KKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 777
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 963 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1020
Query: 778 PVNADIVKKYFA 789
N + +++++A
Sbjct: 1021 SWNIEHLRRFYA 1032
>UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 412 bits (1058), Expect = e-113
Identities = 256/787 (32%), Positives = 419/787 (52%), Gaps = 56/787 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQRDET 66
L N+ W +E + AF +IK +L + P + P EG L LY+S ++V VL E
Sbjct: 28 LRGNKTFKWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVL--LVER 85
Query: 67 GKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 126
K + IY++S + E RY +LEK A+ AA++LR Y HT ++S P++
Sbjct: 86 IKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKAL 144
Query: 127 EKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 186
+K +G++ R + LSE+++ +K + AIK LAD + +E + +EE
Sbjct: 145 QKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEEEE--- 191
Query: 187 LKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTN 246
+P W L DG+ G G G ++ SP+G+ F I F+ +N
Sbjct: 192 ---------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASN 234
Query: 247 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTY 306
N AEYEA I GI+ + K + + DS LV +QI+GE+E + Y + L
Sbjct: 235 NEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQ 294
Query: 307 FTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQ 364
+E+ +PR +N ADAL+ L+S + +N V +++ + +++ +
Sbjct: 295 LISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC------- 347
Query: 365 AGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLL 424
V K WY DI+++ L+ + P + K ++R + +++ LYKR+ LL
Sbjct: 348 ----VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLL 401
Query: 425 RCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIY 484
RC E E M + +G G H G +S +++R G YW M DC +Y +KC KCQ +
Sbjct: 402 RCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKF 461
Query: 485 ADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 544
A ++ P + L + +P PF+ WG+D++G AS G ++++VA+DYFTKW+EA
Sbjct: 462 APVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKF 520
Query: 545 VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNG 604
+ + V FI NII R+G+P I+ D+GT + + ++ C EFKI+ +++ PQ NG
Sbjct: 521 IKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNG 580
Query: 605 AVEAANKNIKRIVQKMVTTYKN-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPL 663
EAANK I +QK + +K W +++P L RTT + +TG +PFSL +G EAV+P+
Sbjct: 581 QAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPI 640
Query: 664 EVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKTAFDKKVNP 722
EV +PS RV + +++E Q + L+ + E R+ A + + + RM ++++V
Sbjct: 641 EVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRH 696
Query: 723 REFKVGELVLKRRIS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNA 781
R G+LVL+R + + + GK+T N+EGPY + + + G+ L ++G L N NA
Sbjct: 697 RPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNA 756
Query: 782 DIVKKYF 788
D++KKYF
Sbjct: 757 DVLKKYF 763
>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
Length = 2017
Score = 411 bits (1057), Expect = e-113
Identities = 263/797 (32%), Positives = 395/797 (48%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1265 LKKTDDFHWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1324
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H +++ P+
Sbjct: 1325 DGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PL 1383
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1384 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1438
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1439 KVEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1478
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1479 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1538
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1539 LEDKFDGLELSHVLRHNNKAADRLANFGSKREVAPSD----VFVEHLYAPT--VPHKDTT 1592
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1593 QVAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRRSRLYVMHEAELYKK 1647
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1648 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1707
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1708 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWI 1766
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNG V + CE+F I+ +S
Sbjct: 1767 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASV 1825
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W E LP L RTT +TG +PF
Sbjct: 1826 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFF 1885
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ + Y +
Sbjct: 1886 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGL 1942
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1943 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 2000
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 2001 TLIDNSWNIEHLRRFYA 2017
>UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa]
Length = 1964
Score = 411 bits (1056), Expect = e-113
Identities = 261/795 (32%), Positives = 396/795 (48%), Gaps = 54/795 (6%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ +K L +PP+L P PL+LY+S + V VL +R+E
Sbjct: 1212 LKKTDNFQWGPEAQKAFEDLKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1271
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1272 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1330
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
+ G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1331 GDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVE 1385
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
+I + W + FDG+ G G G V++SP G + + I F
Sbjct: 1386 KIEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1425
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1426 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRK 1485
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S R +DV V+ L P+
Sbjct: 1486 LEDKFDGLELSHVLRHNNEAADRLANFGSK-RETAPSDV---FVEHLYTPTVPHKDTTQD 1541
Query: 363 DQAGENVVGYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNY 419
+ + W +FL S+E P QDK R++ R ++L LYK++
Sbjct: 1542 ADTRDIAMVEADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVLHESELYKKSP 1596
Query: 420 DMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCH 479
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1597 SGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCE 1656
Query: 480 KCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA 539
CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1657 GCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEA 1715
Query: 540 ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYR 599
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S
Sbjct: 1716 KPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAH 1774
Query: 600 PQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFSLV 654
P NG VE AN I R+ ++ + W + LP L RTT +TG +PF LV
Sbjct: 1775 PMSNGQVERANGMILQGIKARVFDRLKSYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLV 1834
Query: 655 YGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKT 714
YG EA+LP EVE SLR E + + R D L+ +EE R A+ + Y ++
Sbjct: 1835 YGAEAMLPSEVEFESLRF---RNFREERYGEDRVDDLHRLEEVREAALIQSARYLQGLRR 1891
Query: 715 AFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVE 774
++ V R F VG+LVL+R Q R K +P +EGP+++ + G+ L DG
Sbjct: 1892 YHNRNVRSRAFLVGDLVLRR--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTL 1949
Query: 775 LPNPVNADIVKKYFA 789
+ N + + +++++A
Sbjct: 1950 VDNSWHIEHLRRFYA 1964
>UniRef100_Q60DY3 Putative polyprotein [Oryza sativa]
Length = 1799
Score = 410 bits (1055), Expect = e-113
Identities = 262/797 (32%), Positives = 396/797 (48%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K +L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1047 LKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1106
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1107 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1165
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1166 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1220
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1221 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1260
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1261 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1320
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1321 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPT--VPHKDTT 1374
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1375 QIAGTHDVALVEADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKK 1429
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1430 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1489
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1490 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1548
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNG V + CE+F I+ +S
Sbjct: 1549 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASV 1607
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1608 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFF 1667
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ + Y +
Sbjct: 1668 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGL 1724
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1725 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1782
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1783 TLVDNSWNIEHLRRFYA 1799
>UniRef100_Q75M60 Putative polyprotein [Oryza sativa]
Length = 2004
Score = 410 bits (1055), Expect = e-113
Identities = 263/797 (32%), Positives = 395/797 (48%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1243 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1302
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1303 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1361
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1362 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1416
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1417 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1456
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1457 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1516
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1517 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPT--VPHKDTT 1570
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W + +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1571 QVAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKK 1625
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1626 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1685
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1686 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1744
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNG V + CE+F I+ +S
Sbjct: 1745 EAKPVVTITADNAPDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASV 1803
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W E LP L RTT +TG +PF
Sbjct: 1804 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFF 1863
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ + Y +
Sbjct: 1864 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGL 1920
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ G+ L DG
Sbjct: 1921 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISAVTRPGSYRLKREDG 1978
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1979 TLVDNSWNIEHLRRFYA 1995
>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
Length = 1756
Score = 410 bits (1055), Expect = e-113
Identities = 262/797 (32%), Positives = 396/797 (48%), Gaps = 58/797 (7%)
Query: 7 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QRDE 65
L K W E Q+AF+ K +L EPP+L P PL+LY+S + V VL +R+E
Sbjct: 1004 LKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1063
Query: 66 TG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 122
G K + IY++S+ D +TRY ++K + ++L HY H+ +++ P+
Sbjct: 1064 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1122
Query: 123 KYIFEKAVVTGKIARGQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 182
I G+IA+ + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1123 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1177
Query: 183 EIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILF 242
++ + W + FDG+ G G G V++SP G + + I F
Sbjct: 1178 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1217
Query: 243 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARR 302
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW N++ YR R+
Sbjct: 1218 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1277
Query: 303 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 362
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1278 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPT--VPHKDTT 1331
Query: 363 DQAGENVVGY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKR 417
AG + V W +FL S+E P QDK R++ R +++ LYK+
Sbjct: 1332 QIAGTHDVALVEADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKK 1386
Query: 418 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARK 477
+ +L RCV E QL+ D+H G G HA T+ K R G++W D + R
Sbjct: 1387 SPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRT 1446
Query: 478 CHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 537
C CQ +A +IH+P L + WPF++WG+DM+G + KA G+ + VAID F+KW+
Sbjct: 1447 CEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWI 1505
Query: 538 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 597
EA +T F NI+ R+GVP++IITDNG V + CE+F I+ +S
Sbjct: 1506 EAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASV 1564
Query: 598 YRPQMNGAVEAANKNI-----KRIVQKMVTTYKNWHEMLPYALHGYRTTVRSSTGATPFS 652
P NG VE AN I R+ ++ W + LP L RTT +TG +PF
Sbjct: 1565 AHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFF 1624
Query: 653 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARM 712
LVYG EA+LP EVE SLR E + + R D L+ +EE R A+ + Y +
Sbjct: 1625 LVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGL 1681
Query: 713 KTAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 772
+ ++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG
Sbjct: 1682 RRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDG 1739
Query: 773 VELPNPVNADIVKKYFA 789
+ N N + +++++A
Sbjct: 1740 TLVDNSWNIEHLRRFYA 1756
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,397,961,755
Number of Sequences: 2790947
Number of extensions: 60961070
Number of successful extensions: 135223
Number of sequences better than 10.0: 4638
Number of HSP's better than 10.0 without gapping: 3881
Number of HSP's successfully gapped in prelim test: 758
Number of HSP's that attempted gapping in prelim test: 123052
Number of HSP's gapped (non-prelim): 7084
length of query: 789
length of database: 848,049,833
effective HSP length: 136
effective length of query: 653
effective length of database: 468,481,041
effective search space: 305918119773
effective search space used: 305918119773
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)
Medicago: description of AC148359.7