BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148289.15 + phase: 0 /pseudo
         (273 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6L3S0 Putative gag-pol polyprotein [Solanum demissum]       37  0.55
UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza...    35  2.1
UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]           35  2.1
UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]                35  2.1
UniRef100_Q9XG91 Tpv2-1c protein [Phaseolus vulgaris]                  33  6.1
UniRef100_Q6L3X6 Putative polyprotein [Solanum demissum]               33  8.0

>UniRef100_Q6L3S0 Putative gag-pol polyprotein [Solanum demissum]
          Length = 532

 Score = 37.0 bits (84), Expect = 0.55
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 8   QKYIGELMLEKFEMKDCNSISNPSETNSKLV-EC 40
           QK  G+ +L++F+MK+CNS+S P +   KL+ EC
Sbjct: 337 QKKYGQDILDRFQMKNCNSVSTPMDKGLKLIKEC 370


>UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
          Length = 2145

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 19/44 (43%), Positives = 26/44 (58%), Gaps = 1/44 (2%)

Query: 5    MHQQKYIGELMLEKFEMKDCNSISNPSETNSKLVECSEEEKWNQ 48
            +HQ KY  EL L+KF+M DC  I+ P  T S L    + E+ +Q
Sbjct: 1529 VHQTKYSKEL-LKKFDMADCKPIATPMATTSSLGPDEDGEEVDQ 1571


>UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1969

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 19/44 (43%), Positives = 26/44 (58%), Gaps = 1/44 (2%)

Query: 5    MHQQKYIGELMLEKFEMKDCNSISNPSETNSKLVECSEEEKWNQ 48
            +HQ KY  EL L+KF+M DC  I+ P  T S L    + E+ +Q
Sbjct: 1529 VHQTKYSKEL-LKKFDMADCKPIATPMATTSSLGPDEDGEEVDQ 1571


>UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]
          Length = 1877

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 19/44 (43%), Positives = 26/44 (58%), Gaps = 1/44 (2%)

Query: 5    MHQQKYIGELMLEKFEMKDCNSISNPSETNSKLVECSEEEKWNQ 48
            +HQ KY  EL L+KF+M DC  I+ P  T S L    + E+ +Q
Sbjct: 1611 VHQTKYSKEL-LKKFDMADCKPIATPMATTSSLGPDEDGEEVDQ 1653


>UniRef100_Q9XG91 Tpv2-1c protein [Phaseolus vulgaris]
          Length = 374

 Score = 33.5 bits (75), Expect = 6.1
 Identities = 15/37 (40%), Positives = 26/37 (69%), Gaps = 1/37 (2%)

Query: 1   TSMVMHQQKYIGELMLEKFEMKDCNSISNPSETNSKL 37
           T + + Q+KY  E+ L+K++M++CN +S P E  +KL
Sbjct: 105 TGIFVSQEKYAKEI-LKKYKMENCNPVSIPMEPGAKL 140


>UniRef100_Q6L3X6 Putative polyprotein [Solanum demissum]
          Length = 1758

 Score = 33.1 bits (74), Expect = 8.0
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 7   QQKYIGELMLEKFEMKDCNSISNPSETNSKLVECSEEEK 45
           QQKYI ++ L +F+M+DC  +S P  T  KL +  + +K
Sbjct: 944 QQKYILDI-LNRFKMQDCKPVSTPISTGVKLGKDEDSKK 981


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.358    0.156    0.552 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 358,955,050
Number of Sequences: 2790947
Number of extensions: 11257519
Number of successful extensions: 44964
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 44960
Number of HSP's gapped (non-prelim): 9
length of query: 273
length of database: 848,049,833
effective HSP length: 125
effective length of query: 148
effective length of database: 499,181,458
effective search space: 73878855784
effective search space used: 73878855784
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 74 (33.1 bits)