BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148289.13 - phase: 0 
         (2306 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 2452  0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                 1717  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   897  0.0
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      771  0.0
UniRef100_Q6L974 GAG-POL [Vitis vinifera]                             771  0.0
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   770  0.0
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]               701  0.0
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]                      699  0.0
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]                      697  0.0
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               697  0.0
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]              697  0.0
UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]                  696  0.0
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          695  0.0
UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]               695  0.0
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]                 695  0.0
UniRef100_Q60DU9 Putative polyprotein [Oryza sativa]                  694  0.0
UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]                      693  0.0
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]                  692  0.0
UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]               687  0.0
UniRef100_Q93Y89 Gag-pol [Oryza sativa]                               687  0.0

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 2452 bits (6355), Expect = 0.0
 Identities = 1293/2333 (55%), Positives = 1632/2333 (69%), Gaps = 155/2333 (6%)

Query: 41   AQIQAQAQALAQAQTQAQAVTEAQARSQAPPPPPPIRTQAEASSSWTLCADTPTQSAPQR 100
            AQ     Q +AQ Q + +A+ +   R +A  PPP      +A        DTP  + P  
Sbjct: 16   AQFMHMMQGVAQGQEELRALVQ---RQEAVTPPPN-----QALPEGNPVHDTPAAAIPVN 67

Query: 101  SAPWFPPFTAGEIFRPITCEAQMPTHQYTAQVPLPAMRVTPATMTYSAPVIHTVPQTEEP 160
            +      +  GE    I  + Q P     A       RV  A      P+   V + E+ 
Sbjct: 68   N------YAVGEELMGIRVDGQ-PIAPDAANA-----RVIHAPARNRIPI---VDRQEDL 112

Query: 161  IFHSGNVEAYEEVNDLRE-KYDELRRDMKALREKGKFGKTAYDLCLVPSVQVPHKFKIPD 219
                   E     ND R+ K D L   ++A+  +   G    ++ LV  +++P+KFK P 
Sbjct: 113  FTMFSEDEDIPGRNDARDRKVDALAEKIRAMECQNSLGFDVTNMGLVEGLRIPYKFKAPS 172

Query: 220  FEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTNLDKTRIQTFRD 279
            F+KY G+SCP  H++ Y R++ AY  D+++ +Y+FQ+SL+G +  WY  L    I+ +RD
Sbjct: 173  FDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKSDSIRCWRD 232

Query: 280  LCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSPRIEEKEMTKLF 339
            L EAF+ QY +N+DM P R+ LQ++ Q   E+FKEYAQRWR+ AA+V P + E+E+T +F
Sbjct: 233  LGEAFLRQYKHNMDMAPSRTQLQSLCQKSNESFKEYAQRWRELAARVQPPMLERELTDMF 292

Query: 340  LKTLNHFYYKKMVGSTP-KSFAEMVGMGVQLEEGVREGRLVKNTTPVSGTKKTGNHFPRK 398
            + TL   +  +M GS P  SF+++V  G + E  ++ G++       S +KK     PR+
Sbjct: 293  IGTLQGVFMDRM-GSCPFGSFSDVVICGERTESLIKTGKI--QDVGSSSSKKPFAGAPRR 349

Query: 399  KEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSP 458
            +E E   V H   Q     Y+  AA+T                              P+P
Sbjct: 350  REGETNAVQHRRDQNRIE-YRQAAAVTI-----------------------------PAP 379

Query: 459  QNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPI 518
            Q   P+  QQQ  QQ                     PQQ  QQ+PYQ  P+Q  P R   
Sbjct: 380  Q---PRQQQQQRVQQ---------------------PQQQQQQRPYQ--PRQRMPDRR-F 412

Query: 519  NPIPVTYAELLPGLLKKNLVQTRTAPPIPEKLPSWYRLDQTCDFHEGGRGHNIETCYAFK 578
            + +P++YAELLP LL+  LV+  T  P P  LP  Y  +  CDFH G  GH+ E C A +
Sbjct: 413  DSLPMSYAELLPELLRLGLVELCTMAP-PTVLPPGYDANVRCDFHSGAPGHHTEKCRALQ 471

Query: 579  STVQKLINDGKITFTDSAPNVQTNPLPNHGAATVNMIEDCQKTRPILNVQRIRTPLVPLH 638
              VQ LI+   I F    PNV  NP+P HG   VN IE  +    + NV  ++T L+ + 
Sbjct: 472  HKVQDLIDANAINFAP-VPNVVNNPMPQHGGHRVNNIEGKEAEDLVDNVDDVQTSLLVVK 530

Query: 639  AKLCKVDLFEHDHDLCEICLMNSGGCQKVRNDIQGLLDRGELVVERKCDD---VCVIT-- 693
            ++L    ++    + C  C  +  GC ++R  IQG++D G L   R   D   V  IT  
Sbjct: 531  SRLLNEGVYSGCDEDCLGCAESENGCDQLRAGIQGMMDEGCLQFSRAVKDRGTVSTITIY 590

Query: 694  ---PEGPLEVFYDSRKSTITPLVICLP------------GPLPYASEKAIPYKY------ 732
                EG  +    +  +  TP+ I +P            G     + +A+P+KY      
Sbjct: 591  FKPSEGHGQRVVSAPATNGTPVTIPVPVTISAPTTIVASGRRAVENSRAVPWKYDNAYRS 650

Query: 733  -----------NATMIEEG--REVPIPPLSSVDNVVEDSRVLRNGRVVPIVFPKKIDAII 779
                       N T +  G    VP     +VDNV       R+GR+      +  +A  
Sbjct: 651  NRRVESQTKPVNQTPVTIGLANRVPATVGPAVDNVGGPGGFTRSGRLFAPQPLRDNNAEA 710

Query: 780  NKEVRTKDAGIAKEVDQPNGAGTSAEFD--EILKLIKKSEYKVVDQLMQTPSKISIMSLL 837
              + + K A + +E  Q      S E D  E +K+IKKS+YK+VDQL QTPSKISI+SLL
Sbjct: 711  LAKAKGKQAVVEEEPVQKEAPEGSFEKDVEEFMKMIKKSDYKIVDQLNQTPSKISILSLL 770

Query: 838  LNSEAHKDALMKVLEQAFVDYDVTVGQFGGIVGNITACNNLSFSDEELPAEGRNHNRALH 897
            L SEAH++AL+K+L  A+V  +++V Q  G++ N++  + + F++ +LP EGRNHN+ALH
Sbjct: 771  LCSEAHRNALLKMLNLAYVPQEISVNQLEGVMANVSTRHGVGFTNLDLPPEGRNHNKALH 830

Query: 898  ISVNCKTDALSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKAFDGSRKDVLGEV 957
            I++ CK   LS+VLVDTGSSLNVL K    ++  +G  L  S ++V+AFD S++ V GEV
Sbjct: 831  ITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLTPSDLIVRAFDRSKRSVCGEV 890

Query: 958  VLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLKFVKNGKLVTVNG 1017
             LP+ +GP+VF + F VMDIQ +YSCLLGRPWIH AGAV+STLHQKLK+V NG++VTV G
Sbjct: 891  TLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCG 950

Query: 1018 EEALLVSHLSSFSFIGADN-VEGTPFQGFT------IEDKNTKRNEASISSLKDAQKVIQ 1070
            EE +LVSHLSSF ++  D  +  T  Q F       +     ++   SI+S K A++V+ 
Sbjct: 951  EEEILVSHLSSFKYVEVDGEIHETLCQVFETVALEKVAYAEQRKPGVSITSYKQAKEVVD 1010

Query: 1071 AGGSTSWGKLIELPENKHREGLGFFPSTGLSTAKKG--TFHSSGFIHAIIGD-------- 1120
            +G +  WGK+++LP  + + G+G+ P       + G  TF S+G ++   GD        
Sbjct: 1011 SGKAEGWGKMVDLPVKEDKFGVGYEPLQAEQNGQAGPSTFTSAGLMNH--GDVSATGSED 1068

Query: 1121 -DPESVPRGFI---TPGVSSHNWVAIDVPFVAHLSKLEIDEPVEQHNPMISPNFEFHVYE 1176
             D +     ++    PG S +NW A +V  V  L++ ++       + +   +F+  +Y+
Sbjct: 1069 CDSDCDLDNWVRPCAPGGSINNWTAEEVVQVTLLTESDLMAFTMNGSVIAQYDFDNPIYQ 1128

Query: 1177 AEEEENE--EIPDEISRLLEQEKKTIQPYGDELEVINLGTKEDKKEIKVGASLETSVKKQ 1234
            AEEE  E  E+P E+ RLL+QE++ IQP+ +ELEV+NLGT++  +EIK+GA+LE SVK++
Sbjct: 1129 AEEESEEDCELPAELVRLLKQEERVIQPHQEELEVVNLGTEDATREIKIGAALEDSVKRR 1188

Query: 1235 VIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQ 1294
            +IE+L+EYV++FAWSYQDMPGLDTDIVVH LPL+  CP VKQKLRRT PDMA KIKEEVQ
Sbjct: 1189 LIEMLREYVEIFAWSYQDMPGLDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQ 1248

Query: 1295 KQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDST 1354
            KQ DAGFL  ++YP W+ANIVPVPKKDGKVRMCVDYRDLN+ASPKDDFPLPHIDVLVD+T
Sbjct: 1249 KQWDAGFLAVTSYPPWMANIVPVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNT 1308

Query: 1355 AKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1414
            A+S VFSFMDGFSGYNQIKMAPED EKT+FITPWGTFCYKVMPFGL NAGATYQR MTTL
Sbjct: 1309 AQSSVFSFMDGFSGYNQIKMAPEDMEKTTFITPWGTFCYKVMPFGLKNAGATYQRAMTTL 1368

Query: 1415 FHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLG 1474
            FHDM+HKEIEVYVDDMI KS TEE+H+  LQK+F RLRK+KLRLNPNKCTFGVRSGKLLG
Sbjct: 1369 FHDMMHKEIEVYVDDMIAKSQTEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLG 1428

Query: 1475 FIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1534
            FIVS+KGIEVDP KVKAI+EMP P+TEK+VRGFLGRLNYI+RFISH+TATC PIFKLLRK
Sbjct: 1429 FIVSEKGIEVDPAKVKAIQEMPEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRK 1488

Query: 1535 EQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVLGQQDETGRK 1594
             Q I W +DCQKAFD IK+YL +PPILIPPV GRPLIMYL+V ENSMGCVLG+ DE+GRK
Sbjct: 1489 NQAIKWNDDCQKAFDKIKEYLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDESGRK 1548

Query: 1595 EHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKP 1654
            EHAIYYLSKKFT+CE+RYS+LEKTCCALAWAA+RLR YM+NHTT L+SKMDP+KYIFEKP
Sbjct: 1549 EHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKP 1608

Query: 1655 ALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKM 1714
            ALTGR+ARWQM+L+EYDI+  SQKAIKGSIL+D+LA QP+EDY+P+ F+FPDE+IMYLKM
Sbjct: 1609 ALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKM 1668

Query: 1715 KDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIA 1774
            KDC EPL  EGPDPD  W L+FDGAVN+ GNG+GAVL+ PKGAH+PF+ARL FD TNN A
Sbjct: 1669 KDCKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEA 1728

Query: 1775 EYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNK 1834
            EYEACIMGIEEAIDLRIK ++I+GDSALV+NQ+ G W T    LIPYRDY RR+LTFF K
Sbjct: 1729 EYEACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKK 1788

Query: 1835 VELHHIPRDENQMADALATLSSMIKVNHHNDVPLISVKFLDRPAYVFAAE-VVFDDKPWF 1893
            V+L+H+PRDENQMADALATLSSMIKVN  N VP ++V  L+RPAYVFAAE VV D+KPW+
Sbjct: 1789 VKLYHVPRDENQMADALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESVVIDEKPWY 1848

Query: 1894 HDIKVFLQTREYPPGASNKDKKTLRRLSSNFFLN-GDILYKRNFDTVLLRCVDKYEADLL 1952
            +DIK FL+T+EYP GAS  DKKTLRRL+ +F+LN  D+LYKRNFD VLLRC+D+ EAD+L
Sbjct: 1849 YDIKNFLKTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADML 1908

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + E+HEGSFG H  GH MAKK+LRAGYYWMTMESDC+K+ RKCHKCQIYAD++H+PP+ L
Sbjct: 1909 MQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPL 1968

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
            N+++SPWPF+MWGIDMIG+IEP ASNGHRFILVAIDYFTKWVEAASYAN+TKQVV +FIK
Sbjct: 1969 NVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIK 2028

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKR 2132
              IICRYG+P RIITDNG+NLNNKMMKELC DFKIEHHNSSPYRP+MNGAVEAANKNIK+
Sbjct: 2029 KEIICRYGVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKK 2088

Query: 2133 IVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLME 2192
            IV+KMVVTYKDWHEMLPFALHGYRTSVRTSTGATP+SLVYGMEAVLPVEVEIPSLRVL++
Sbjct: 2089 IVRKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLD 2148

Query: 2193 ADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKI 2252
              L EAEW++ R+++L+LIEE+R+  +CHGQLYQ+RMK+AFD+KVRPR ++ GDLVLK+I
Sbjct: 2149 VKLDEAEWIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRI 2208

Query: 2253 FSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
                 D+RGKW PNYEGPYVVK+ FSGGA+ L TMDGE+ P PVN+D VKKYF
Sbjct: 2209 LPPGTDNRGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYF 2261


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 1717 bits (4447), Expect = 0.0
 Identities = 945/1902 (49%), Positives = 1225/1902 (63%), Gaps = 161/1902 (8%)

Query: 24   EMAELIKTMAETQTQAQAQIQAQAQALAQAQTQAQAVTEAQARSQAPPPPPPIRTQAEAS 83
            E+AE+   MA+     Q   Q Q +  A  Q Q  A+      + APP   P+       
Sbjct: 7    ELAEMKANMAQFMNMMQGVAQGQEELRALVQRQEAAIPPV---NHAPPEGGPVNGN---- 59

Query: 84   SSWTLCADTPTQSAPQRSAPWFPPFTAGEIFRPITCEAQMPTHQYTAQVPLPAMRVTPAT 143
                + A  P  +           +  G+    I    Q P     A       R   A 
Sbjct: 60   ---NVAAAVPINN-----------YAVGDELGGIRINGQ-PIAPDVANA-----RAVRAP 99

Query: 144  MTYSAPVIHTVPQTEEPIFH--SGNVEAYEEVNDLREKYDELRRDMKALREKGKFGKTAY 201
                AP++      +E +F   S + +    V++   K D L   ++A+  +   G    
Sbjct: 100  ARNPAPIV----DRQEDMFSLLSEDEDVLGRVDERDRKVDALAEKIRAMECQNSLGFDVT 155

Query: 202  DLCLVPSVQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGP 261
            ++ LV  +++P+KFK P F+KY G+SCP  H++ Y R++ AY  D+++ +Y+FQ+SL+G 
Sbjct: 156  NMGLVEGLRIPYKFKAPSFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGA 215

Query: 262  ASKWYTNLDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRD 321
            +  WY  L +  I+ ++DL EAF+ QY +N+DM P R+ LQ++ Q   E+FKEYAQRWR+
Sbjct: 216  SLDWYMELKRDSIRCWKDLGEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRE 275

Query: 322  TAAQVSPRIEEKEMTKLFLKTLNHFYYKKMVGSTP-KSFAEMVGMGVQLEEGVREGRLVK 380
             AA+V P + E+E+T +F+ TL   +  +M GS P  SF+++V  G + E  ++ G++  
Sbjct: 276  LAARVQPPMLERELTDMFIGTLQGVFMDRM-GSCPFVSFSDVVICGERTESLIKTGKI-- 332

Query: 381  NTTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNNHPQI 440
                 S +KK     PR++E E   V +   Q      Q  A   P   P QQ     Q 
Sbjct: 333  QDAGSSSSKKPFAGAPRRREGETNAVQYRRDQNRSQRCQVAAVTIPAPQPRQQQQQRVQQ 392

Query: 441  PQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQ 500
            P                              QQQ  QQ+PYQ       P Q+ P + F 
Sbjct: 393  P------------------------------QQQQQQQRPYQ-------PRQRMPDRRF- 414

Query: 501  QQPYQQRPQQPRPPRMPINPIPVTYAELLPGLLKKNLVQTRTAPPIPEKLPSWYRLDQTC 560
                              + +P++YAELLP LL+  +V+ RT  P P  LP  Y  +  C
Sbjct: 415  ------------------DSLPMSYAELLPELLRLGMVELRTMAP-PTVLPPGYDANVRC 455

Query: 561  DFHEGGRGHNIETCYAFKSTVQKLINDGKITFTDSAPNVQTNPLPNHGAATVNMIEDCQK 620
            DFH G  GH+ E C A +  VQ LI+   I F    PNV  NP+P HG   VN IE  + 
Sbjct: 456  DFHSGAPGHHTEKCRALQHKVQDLIDAKAINFA-PVPNVVNNPMPQHGGHRVNNIEGKEA 514

Query: 621  TRPILNVQRIRTPLVPLHAKLCKVDLFEHDHDLCEICLMNSGGCQKVRNDIQGLLDRGEL 680
               ++NV  ++T L+ +  +L    ++    + C  C  +  GC ++R  IQG++D G L
Sbjct: 515  EDLVVNVDDVQTSLLVVKGRLLNGGVYSGCDEDCLGCAESENGCDQLRTGIQGMMDEGCL 574

Query: 681  VVERKCDD---VCVIT-----PEGPLEVFYDSRKSTITPLVICLP------------GPL 720
               R   D   V  IT      EG  +    +  +  TP+ I +P            G  
Sbjct: 575  QFSRAVKDRGTVSTITIYFKPSEGRGQRVVSAPATNGTPVTISVPVTISAPTTIAASGRR 634

Query: 721  PYASEKAIPYKYNATMIEEGR-------------------EVPIPPLSSVDNVVEDSRVL 761
               + +A+P+KY+       R                    VP     +VDNV       
Sbjct: 635  AVENSRAVPWKYDNAYRSNRRAESQTRPVNQAPVTIGLPNRVPATVGPAVDNVGGPGGFT 694

Query: 762  RNGRVVPIVFPKKIDAIINKEVRTKDAGIAKEVDQPNGAGTSAEFD--EILKLIKKSEYK 819
            R+GR+      +  +A    + + K A + +E  Q      S E D  E +K+IKKS+YK
Sbjct: 695  RSGRLFAPQPLRDNNAEALAKAKGKQAVVEEEPVQKEAPEGSFEKDVEEFMKIIKKSDYK 754

Query: 820  VVDQLMQTPSKISIMSLLLNSEAHKDALMKVLEQAFVDYDVTVGQFGGIVGNITACNNLS 879
            +VDQL QTPSKISI+SLLL SEAH++AL+K+L  A+V  +++V Q  G++ N++  + + 
Sbjct: 755  IVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQEISVNQLEGVMANVSTRHGVG 814

Query: 880  FSDEELPAEGRNHNRALHISVNCKTDALSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRS 939
            F++ +L  EGRNHN+ALHI++ CK   LS+VLVDTGSSLNVL K    ++  +G  L  S
Sbjct: 815  FTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLTPS 874

Query: 940  GVMVKAFDGSRKDVLGEVVLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVTST 999
             ++V+AFDGS++ V GEV LP+ +GP+VF + F VMDIQ +YSCLLGRPWIH AGAV+ST
Sbjct: 875  DLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVSST 934

Query: 1000 LHQKLKFVKNGKLVTVNGEEALLVSHLSSFSFIGAD-NVEGTPFQGF------TIEDKNT 1052
            LHQKLK+V NG++VTV GEE +LVSHLSSF ++  D  +  T  Q F       +     
Sbjct: 935  LHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEIHETLCQAFETVALEKVAYAEQ 994

Query: 1053 KRNEASISSLKDAQKVIQAGGSTSWGKLIELPENKHREGLGFFPSTGLSTAKKG--TFHS 1110
            ++  ASI+S K A++V+ +G +  WGK++ LP  + + G+G+ P       + G  TF S
Sbjct: 995  RKPGASITSYKQAKEVVDSGKAEGWGKMVYLPVKEDKFGVGYEPLQAEQNGQAGPSTFTS 1054

Query: 1111 SGFIHAIIGD---------DPESVPRGFI---TPGVSSHNWVAIDVPFVAHLSKLEIDEP 1158
            +G ++   GD         D +     ++    PG S +NW A +V  V  L++ ++   
Sbjct: 1055 AGLMNH--GDVSATGSEDCDSDCDLDNWVRPCAPGGSINNWTAEEVVQVTLLTESDLMAF 1112

Query: 1159 VEQHNPMISPNFEFHVYEAEEEENE--EIPDEISRLLEQEKKTIQPYGDELEVINLGTKE 1216
               ++ M   +F   +Y+AEEE  E  E+P E+ RLL QE++ IQP+ +ELEV+NLGT++
Sbjct: 1113 TMNNSVMAQYDFGNPIYQAEEESEEDCELPAELVRLLRQEERVIQPHQEELEVVNLGTED 1172

Query: 1217 DKKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQ 1276
             K+EIK+GA+LE SVK+++IE+L+EYV++FAWSYQDMPGLDTDIVVH LPL+  CP VKQ
Sbjct: 1173 AKREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDMPGLDTDIVVHRLPLREGCPSVKQ 1232

Query: 1277 KLRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKA 1336
            KLRRT PDMA KIKEEVQKQ DAGFL  ++YP W+ANIVPVPKKDGKVRMCVDYRDLN+A
Sbjct: 1233 KLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWVANIVPVPKKDGKVRMCVDYRDLNRA 1292

Query: 1337 SPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVM 1396
            SPKDDFPLPHIDVLVD+TA+S VFSFMDGFSGYNQIKMAPED EKT+FITPWGTF YKVM
Sbjct: 1293 SPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIKMAPEDMEKTTFITPWGTFYYKVM 1352

Query: 1397 PFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKL 1456
            PFGL NAGATYQR MTTLFHDM+HKEIEVYVDDMI KS TEE+H+  LQK+F RLRK+KL
Sbjct: 1353 PFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEEHLVNLQKLFDRLRKFKL 1412

Query: 1457 RLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISR 1516
            RLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KVKAI+EMP P+TEK+VRGFLGRLNYI+R
Sbjct: 1413 RLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPKTEKQVRGFLGRLNYIAR 1472

Query: 1517 FISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTV 1576
            FISH+TATC PIFKLLRK Q I W +DCQKAFD IK+YL +PPIL PPV GRPLIMYL+V
Sbjct: 1473 FISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPPILTPPVPGRPLIMYLSV 1532

Query: 1577 LENSMGCVLGQQDETGRKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINH 1636
             ENSMGCVLGQ DE+GRKEHAIYYLSKKFT+CE+RYS+LEKTCCALAWAA+RLR YM+NH
Sbjct: 1533 TENSMGCVLGQHDESGRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNH 1592

Query: 1637 TTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLED 1696
            TT L+SKMDP+KYIFEKPALTGR+ARWQM+L+EYDI+  SQKAIKGSIL+D+LA QP+ED
Sbjct: 1593 TTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIED 1652

Query: 1697 YRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKG 1756
            Y+P+ F+FPDE+IMYLK+KDC+EPL  EGPDPD  W L+FDGAVN+ GNG+GAVL+ PKG
Sbjct: 1653 YQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKG 1712

Query: 1757 AHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHA 1816
            AHIPF+ARL FD TNN AEYEACIMGIEEAIDLRIK ++IYGDSALV+NQ+ G W T   
Sbjct: 1713 AHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQP 1772

Query: 1817 GLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMI 1858
             LIPYRDY RR+LTFF KV L+H+PRDENQMADALATLSSMI
Sbjct: 1773 HLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATLSSMI 1814


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  897 bits (2317), Expect = 0.0
 Identities = 483/1156 (41%), Positives = 701/1156 (59%), Gaps = 46/1156 (3%)

Query: 1173 HVYEAEEEENEEIPDEISRLLEQEKKTIQPYGDELEVINLGTKEDKKEIKVGASLETSVK 1232
            H +E      EE  D ++  L+Q     QP  DEL  +NLGT++D + I V   L    +
Sbjct: 1745 HPFEVAAVGVEEELD-VAGALKQLDDGGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEER 1803

Query: 1233 KQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEE 1292
            +     L E+ D FAW+Y++MPGLD+ +  H L + P+  PVKQ  RR RP+   ++  E
Sbjct: 1804 EDYRSFLMEFRDCFAWTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAE 1863

Query: 1293 VQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVD 1352
            V + I+ GF+    YP+WLANIVPV KK+G+VR+CVD+RDLN+A PKDDFPLP  +++VD
Sbjct: 1864 VDRLINVGFIKEIQYPRWLANIVPVEKKNGQVRVCVDFRDLNRACPKDDFPLPITEMVVD 1923

Query: 1353 STAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMT 1412
            ST            SGYNQIKM   D   T+F TP G F Y VMPFGL NAGATYQR M 
Sbjct: 1924 STTG------YGALSGYNQIKMDLLDAFDTAFRTPKGNFYYTVMPFGLKNAGATYQRAMQ 1977

Query: 1413 TLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKL 1472
             +  D+IH  +E YVDDM+VK+   E H + L+ +F+RLR+++L++NP KC F V+SG  
Sbjct: 1978 FVLDDLIHHSVECYVDDMVVKTKDHEHHQEDLRIVFERLRRHQLKMNPLKCAFAVQSGVF 2037

Query: 1473 LGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLL 1532
            LGF++  +GIE++P K+KAI  MP P+  K++R   G+L YI RFIS+++    P  KL+
Sbjct: 2038 LGFVIRHRGIEIEPKKIKAILNMPPPQELKDLRKLQGKLAYIRRFISNLSGRIQPFSKLM 2097

Query: 1533 RKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVLGQQDETG 1592
            +K    VW E+CQ  FDSIK+YLL PP+L  PV+GRPLI+Y+     S+G +L Q ++ G
Sbjct: 2098 KKGTPFVWDEECQNGFDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDEG 2157

Query: 1593 RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFE 1652
             KE A YYLS+     E  YS +EK C AL +A K+LRHYM+ H   L+++ DPI+Y+  
Sbjct: 2158 -KEVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLS 2216

Query: 1653 KPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYL 1712
            +P LTGR+ +W +L+ EYDI    QKAIKG  LA+ LA  P+ D  P+  + PDEEI   
Sbjct: 2217 QPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTA 2276

Query: 1713 KMKDCDEPLFGEGPDPDSVWGLIFDGA----VNVYGN-----GIGAVLLTPKGAHIPFT- 1762
            ++++               W L FDGA    +N  G      G G V  TP+G  I  + 
Sbjct: 2277 ELQE--------------QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSF 2322

Query: 1763 ARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYR 1822
            + L+ +C+NN AEYEA I G+  A+ + ++++  +GDS L+I QI   +E     L+PY 
Sbjct: 2323 SLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYY 2382

Query: 1823 DYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVNHHNDVPLISVKFLDRPAY--V 1880
              ARRL+  F  +E+ H+PR +N  ADALA L++ +     N   ++  +    PA   +
Sbjct: 2383 TVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLEL 2442

Query: 1881 FAAEVVF------DDKPWFHDIKVFLQTREYPPGASNKDKKTLRRLSSNFFLNGDILYKR 1934
               EV        +++ W      + +    P      +++ L+R   ++     +LYKR
Sbjct: 2443 IPEEVNIIITNSAEEEDWRQPFLDYFKHGSLP--EDPVERRQLQRRLPSYIYKAGVLYKR 2500

Query: 1935 NF-DTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTR 1993
            ++   VLLRCVD+ EA+ ++ E+H G  G H +G  M   I   GYYW  + +DC K  +
Sbjct: 2501 SYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAK 2560

Query: 1994 KCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKW 2053
             CH CQI+ +  H PP  L+     WPF  WGID+IG I P +S GHRFIL A DYF+KW
Sbjct: 2561 TCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKW 2620

Query: 2054 VEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSS 2113
             EA     V    V+ F++ HII R+G+P+RI +DN     ++ +    + +KI+ + S+
Sbjct: 2621 AEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYST 2680

Query: 2114 PYRPQMNGAVEAANKNIKRIVQKMVVTY-KDWHEMLPFALHGYRTSVRTSTGATPFSLVY 2172
             Y PQ NG  EA NK + +I++K V  + +DWH+ L  AL  YR +VRT T ATP+SLVY
Sbjct: 2681 GYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVY 2740

Query: 2173 GMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQA 2232
            G EAVLP+E+++PSLRV +  +L++ E ++ R+ +L+ +EE+R+ AL + +LY++ M +A
Sbjct: 2741 GNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRA 2800

Query: 2233 FDKKVRPREFKEGD--LVLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGE 2290
            +DK V+ R F++G+  LVL++        +GK+ P +EGPYV+++A+ GGA  L    G 
Sbjct: 2801 YDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGS 2860

Query: 2291 ELPRPVNTDAVKKYFV 2306
            +   P+N   +KKYFV
Sbjct: 2861 QPMPPINGRFLKKYFV 2876



 Score =  119 bits (299), Expect = 8e-25
 Identities = 86/291 (29%), Positives = 141/291 (47%), Gaps = 18/291 (6%)

Query: 741  REVPIPPLSSVDNVVEDSRV-LRNGRVVPIVFPKKIDAIINKEVRTKDAGIAKEVDQPNG 799
            RE+    L      VE+  + LR G+ +P     K+  +            AK+   P  
Sbjct: 1237 REIFHAELDPEKTKVEEVNISLRGGKTLPDPHKSKVPNVDKP---------AKKASPPGE 1287

Query: 800  AGTSAEFDEILKLIKKSEYKVVDQLMQTPSKISIMSLLLNSEAHKDALMKVLEQAFVDYD 859
            A  + E     K     +YKV+  L + P+ +S+   L+     ++AL+K L+   V Y+
Sbjct: 1288 APEAPETKTGSKEKPAVDYKVLAHLKRIPALLSVYDALMMVPDLREALIKALQAPEV-YE 1346

Query: 860  VTVGQFGGIVGNITACNNLSFSDEELPAEGRNHNRALHISVNCKTDALSNVLVDTGSSLN 919
            V + +   +  N    N ++F+DE+   +G +HNR L+I  N  +  L  +L+D GS++N
Sbjct: 1347 VDMAKHR-LYDNPLFVNEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVN 1405

Query: 920  VLSKTTYTQLAYQGAPLRRSGVMVKAFDGSRKDVLGEVVLPITVGPQVFQVNFQVMDIQA 979
            +L   + T+  +    L    V++  FD   K  LG + + I +    F+V F V++   
Sbjct: 1406 ILPVRSLTRAGFTTKDLEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANT 1465

Query: 980  SYSCLLGRPWIHEAGAVTSTLHQKLKFVKNGKLVTVNGEEALLVSHLSSFS 1030
            SYS LLGRPWIH+   V STLHQ LKF+        NG +  + S+ S ++
Sbjct: 1466 SYSALLGRPWIHKYRVVPSTLHQCLKFLDG------NGVQQRITSNFSPYT 1510


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  771 bits (1992), Expect = 0.0
 Identities = 438/1117 (39%), Positives = 638/1117 (56%), Gaps = 57/1117 (5%)

Query: 1208 EVINLGTKEDKKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPL 1267
            E++N+   +  + + VGA +  S++ ++I LLK     FAWS +DM G+D  I  H L +
Sbjct: 759  EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 818

Query: 1268 KPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMC 1327
             P   PVKQK R+  P+ A  + EEV+K + AG +I   YP+WLAN V V KK+GK R+C
Sbjct: 819  DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 878

Query: 1328 VDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITP 1387
            VDY DLNKA PKD +PLPHID LV++T+ + + SFMD FSGYNQI M  +D+EKTSF+T 
Sbjct: 879  VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 938

Query: 1388 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKM 1447
             GT+CYKVM FGL NAGATYQR +  +  D I + +EVY+DDM+VKS+  EDHV++L K 
Sbjct: 939  RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 998

Query: 1448 FQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGF 1507
            F  L  Y ++LNP KCTFGV SG+ LG++V+++GIE +P +++AI E+P+PR  +EV+  
Sbjct: 999  FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1058

Query: 1508 LGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEG 1567
             GR+  ++RFIS  T  C P + LL++     W +D ++AF+ +K YL  PPIL+ P  G
Sbjct: 1059 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1118

Query: 1568 RPLIMYLTVLENSMGCVLGQQDETGRKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAK 1627
              L +Y+ V ++++  VL ++D    ++  I+Y SK   E E+RY ++EK   A+  +A+
Sbjct: 1119 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1176

Query: 1628 RLRHYMINHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILAD 1687
            +LR Y  +HT  +++   P++     P+ +GR+ +W + LSEYDI+ R + A+K  +LAD
Sbjct: 1177 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1235

Query: 1688 HLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGI 1747
             L   PL+           EE                       W L  DG+ +  G+GI
Sbjct: 1236 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1272

Query: 1748 GAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQI 1807
            G  L++P    +  + RLRF  TNN+AEYE  I G+  A  ++I  I  + DS L+  Q+
Sbjct: 1273 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1332

Query: 1808 KGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVNHHNDV- 1866
             G++E  +  +  Y    + +   F   +L  IPR +N  ADALA L+    +   +D+ 
Sbjct: 1333 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLR 1388

Query: 1867 PLISVKFLDRPAY--VFAAEVV-----------FDDKPWFHDIKVFLQTREYPPGASNKD 1913
             +I V+ +D+P+     A E+V            D   W  +I+ +L     P      D
Sbjct: 1389 RIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYLSDGTLP-----SD 1443

Query: 1914 KKTLRRL---SSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTM 1970
            K T RRL   ++ + L  + L K +    +L C+   E + ++ E HEG+ G H  G  +
Sbjct: 1444 KWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRAL 1503

Query: 1971 AKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIG 2030
            A K+ + G+YW TM SDC   T KC +CQ +A  IH P   L    +P+PF  W +D++G
Sbjct: 1504 ALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVG 1563

Query: 2031 RIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNG 2090
             +   AS   RFILV  DYFTKWVEA SYA +    V  F+   IICR+G+P  IITDNG
Sbjct: 1564 PM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNG 1621

Query: 2091 TNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVVTYKD-WHEMLP 2149
            +   +   +  C  +KI  + S+P  PQ NG  EA NK I   ++K +   K  W + L 
Sbjct: 1622 SQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELD 1681

Query: 2150 FALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLN 2209
              L  YRT+ R++T  TPF+  YGMEA+ P EV   SLR  M     E    +   D+L+
Sbjct: 1682 GVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLD 1740

Query: 2210 LIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPD-SRGKWAPNYE 2268
             +EE R  ALC  Q YQ    + +++KV  R F  GDLVL+K+F    + + GK   N+E
Sbjct: 1741 DLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWE 1800

Query: 2269 GPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            G Y V +    G   L TM G  +PR  N+  +K+Y+
Sbjct: 1801 GSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 44/138 (31%), Positives = 72/138 (51%)

Query: 878  LSFSDEELPAEGRNHNRALHISVNCKTDALSNVLVDTGSSLNVLSKTTYTQLAYQGAPLR 937
            +SF+D +L      HN  L + +      ++ VL+DTGSS++++ K   T +      ++
Sbjct: 600  ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIK 659

Query: 938  RSGVMVKAFDGSRKDVLGEVVLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVT 997
                 +  FDG     +G + LPI VG  +  V F V+   A Y+ +LG PWIH+  A+ 
Sbjct: 660  PVSKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIP 719

Query: 998  STLHQKLKFVKNGKLVTV 1015
            ST HQ +KF  +  + T+
Sbjct: 720  STYHQCVKFPTHNGIFTL 737



 Score = 53.1 bits (126), Expect = 1e-04
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 208 SVQVPHKFKIPDFEKYKGSSCPEEHLKMY---VRRMPAYAQD-DQILIYYFQESLTGPAS 263
           S++   K K+   E Y G + P+E L  +   + R      + D      F E LTGPA 
Sbjct: 212 SIRGAQKIKL---ESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAH 268

Query: 264 KWYTNLDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWR 320
            W++ L    I +F  L  +F++ Y+  ++     +DL +++QG KE+ + +  R++
Sbjct: 269 NWFSRLKPNSIDSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFK 325


>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
          Length = 1027

 Score =  771 bits (1992), Expect = 0.0
 Identities = 427/1060 (40%), Positives = 618/1060 (58%), Gaps = 41/1060 (3%)

Query: 1253 MPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLA 1312
            M G+   I  H L +     PV+Q++RR  PD    I+ E+ K ++AGF+   +YP WLA
Sbjct: 1    MKGIHPSITSHRLNVVSTARPVRQRIRRFHPDRQRVIRNEIDKLLEAGFIREVSYPDWLA 60

Query: 1313 NIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQI 1372
            N+V VPKK+GK R+CVDY +LN A PKD FPLP ID +VDST+   + SF+D FSGY+QI
Sbjct: 61   NVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQGMLSFLDAFSGYHQI 120

Query: 1373 KMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIV 1432
             M+P+D EK +FITP   +CYKVMPFGL NAGATYQR MT +F  +I   +EVY+DD++V
Sbjct: 121  PMSPDDEEKIAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVV 180

Query: 1433 KSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAI 1492
            KS T E H+ +LQ++F  LR+Y ++LNP+KC FGV + K LGF+VSQ+GIEV PD+VKA+
Sbjct: 181  KSKTREQHILHLQEVFYLLRRYGMKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAV 240

Query: 1493 REMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIK 1552
             E P PR +KE++   G+L  + RFI+       P F  +RK     WT++CQ A + IK
Sbjct: 241  METPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIK 300

Query: 1553 KYLLEPPILIPPVEGRPLIMYLTVLENSMGCVLGQQDETGRKEHAIYYLSKKFTECESRY 1612
             YL++PPIL  P+    L MYL V E ++  VL  +  + +++  IYY+S+   + E+RY
Sbjct: 301  HYLMQPPILSSPIPKEKLYMYLAVSEWAISAVL-FRCPSPKEQKPIYYVSRALADVETRY 359

Query: 1613 SMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDI 1672
            S +E    AL  AA++LR Y   H   +V    P++ I  KP LTGR+ +W + LSE+ I
Sbjct: 360  SKMELISLALRSAAQKLRPYFQAHPV-IVLTDQPLRNILHKPDLTGRMLQWAIELSEFGI 418

Query: 1673 ECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVW 1732
            E + + ++KG ++AD +    LE  R                    +P   EG      W
Sbjct: 419  EFQPRLSMKGQVMADFV----LEYSR--------------------KPGQHEGSRKKEWW 454

Query: 1733 GLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIK 1792
             L  DGA    G+G+G +L +P G H+    RL F  +NN AEYEA + G++ A+ L + 
Sbjct: 455  TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 1793 NIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1852
             + I+ DS LV+  ++ ++E   A +  Y    R  L  F +  +  I R +N+ ADALA
Sbjct: 515  KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 1853 TLSSMIKVNHHNDVPL-----ISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPP 1907
             +++ + +     +P+      SV  +   +   A +   DD+ W +DI  +++T   P 
Sbjct: 575  GIAASLSIKEAILLPIHVQTNPSVSEISICSTTEAPQA--DDQEWMNDITEYIRTGTLP- 631

Query: 1908 GASNKDKKTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNG 1967
                K    +R  ++ F L G  LYKR+F    LRC+   EA  ++ E+HEG +G H  G
Sbjct: 632  -GDPKQAHKVRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNHSGG 690

Query: 1968 HTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGID 2027
             ++A +    GYYW TM+ +   + ++C KCQ YA   HMP TTL  +S PWPF+ WG+D
Sbjct: 691  RSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQWGMD 750

Query: 2028 MIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIIT 2087
            ++ R  P A    +F+LVA DYF+KWVEA +YA+   + V KF+  +IICR+GIP  II 
Sbjct: 751  IV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQTIIA 809

Query: 2088 DNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVVTYK-DWHE 2146
            DNG   ++   +  C +  I +  S+P  PQ NG  EA NK +   ++K +   K  W E
Sbjct: 810  DNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGKWVE 869

Query: 2147 MLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYD 2206
             LP  L  YRT+    TG TPF+L YGM+AV+P+E+ +P++     A  S+A     R  
Sbjct: 870  ELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLGR-- 926

Query: 2207 QLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPD-SRGKWAP 2265
             L+  +E R +A      YQ+R    +++KVRPR  K G LVL+K F    +   GK+  
Sbjct: 927  NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGKFQA 986

Query: 2266 NYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            N+EGPY+V +A   GA  LQ +DG  L RP N   +K+Y+
Sbjct: 987  NWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  770 bits (1989), Expect = 0.0
 Identities = 428/1108 (38%), Positives = 642/1108 (57%), Gaps = 58/1108 (5%)

Query: 1205 DELEVINLGTKEDKKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHH 1264
            D+ +   L + +D +EI +  ++    +  +IELLKE+ D F W Y +MPG    IV H 
Sbjct: 517  DDKQGQGLMSADDLEEIDISPAIGQG-RHLLIELLKEFRDCFTWEYYEMPGHSRSIVEHR 575

Query: 1265 LPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKV 1324
            LPLKP   P +Q  RR + DM   +K E+++  DAGF+    Y +W+++IVPV KK+GKV
Sbjct: 576  LPLKPGVRPHQQLPRRCKADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKV 635

Query: 1325 RMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSF 1384
            R+C+D+R LNKA+PKD++P+   D LVD+ +  K+ SFMDG +GYNQI MA ED  KT+F
Sbjct: 636  RVCIDFRYLNKATPKDEYPMLVADQLVDAASGHKILSFMDGNAGYNQIFMAEEDIHKTTF 695

Query: 1385 ITPW--GTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVK 1442
              P   G F + V+ F L +AGATYQR M  ++HD+I   +EVY+DD++VKS   EDH+ 
Sbjct: 696  RCPGAIGLFEWVVITFVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIA 755

Query: 1443 YLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEK 1502
             L+K+F+R RKY L++NP KC FGV +G+ LGF+V ++GIEV    + AI+++  P  + 
Sbjct: 756  DLRKVFERTRKYGLKMNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKT 815

Query: 1503 EVRGFLGRLNYISRFISHMTATCGPIFKLLR--KEQGIVWTEDCQKAFDSIKKYLLEPPI 1560
            E++  +G++N++ RFIS ++    P   LLR   +Q   W  + QKA D+IK+YL  PP+
Sbjct: 816  ELQEMIGKINFVRRFISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPV 875

Query: 1561 LIPPVEGRPLIMYLTVLENSMGCVLGQQDETGRKEHAIYYLSKKFTECESRYSMLEKTCC 1620
            LIPP +G P  +YL+  + S+  VL Q+ E  RKE  ++YLS++    E+RYS +EK C 
Sbjct: 876  LIPPQKGIPFRLYLSAGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCL 933

Query: 1621 ALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAI 1680
             L ++  RLRHY++++   ++ K D +KY+   P L GRI +W   L+E+D+   S KAI
Sbjct: 934  CLYFSCTRLRHYLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAI 993

Query: 1681 KGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAV 1740
            KG  +A+ +             D+ D+ I  +++                 W L FDG+V
Sbjct: 994  KGQAIANFIV------------DYRDDSIGSVEVVP---------------WTLFFDGSV 1026

Query: 1741 NVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDS 1800
              +G GIG V+++P+GA   F   ++   TNN AEYEA + G++   ++    IEI GDS
Sbjct: 1027 CTHGCGIGLVIISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDS 1086

Query: 1801 ALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKV 1860
             LVI+Q+ G++E  +  LI Y +  + L+  F  V L H+ R++N  A+ LA  +S    
Sbjct: 1087 LLVISQLAGEYECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGAS---- 1142

Query: 1861 NHHNDVPLISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDKKTLRRL 1920
                       K + +   +  A +  DD  W + +  +LQ        S    + LR  
Sbjct: 1143 ---------GYKLMIKHVQIEVAVITADD--WRYYVYQYLQD------PSQSASRKLRYK 1185

Query: 1921 SSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYY 1980
            +  + L  D LY R  D VLL+C+   +A + I E+HEG  G H + H M   +  AGY+
Sbjct: 1186 ALKYILLDDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYF 1245

Query: 1981 WMTMESDCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGH 2040
            W TM  DC+++ + C  CQ +      P + +N +  PWPF  WGIDMIG I P +S GH
Sbjct: 1246 WPTMLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGH 1305

Query: 2041 RFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKE 2100
            +FILVA DYFTKWVEA     V     ++F++ HII R GIP  I TD G+   +    +
Sbjct: 1306 KFILVATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQ 1365

Query: 2101 LCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVVTY-KDWHEMLPFALHGYRTSV 2159
              D   I+  NSSPY  Q NG  EA+NK++ +++++ +  Y + WH  L  AL  YR + 
Sbjct: 1366 FADSMGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMAC 1425

Query: 2160 RTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTAL 2219
              S    P+ LVY  +A+LP EV I S R  ++ DL+  E+     D+   + + R+ AL
Sbjct: 1426 HGSIQVPPYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRAL 1485

Query: 2220 CHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSF-QPDSR-GKWAPNYEGPYVVKRAF 2277
                  ++R+ + ++KKV P++F EG+L+ K I      DS+ GKW+PN+EGP+ + +  
Sbjct: 1486 AKVIKDKERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVV 1545

Query: 2278 SGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            S GA  LQ +DGE   R +N   +KKY+
Sbjct: 1546 SKGAYMLQGLDGEVYDRALNGKYLKKYY 1573



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 892  HNRALHISVNCKTDALSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKAFDGSRK 951
            H + L+I+       +S ++VD G+++N++   T+ +L      L ++ +++K F G+  
Sbjct: 360  HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 419

Query: 952  DVLGEVVLPITVGPQVFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLKFVKNGK 1011
            + +G + + +TVG +     F V+D + SYS LLGR WIH    + ST+HQ L   +  K
Sbjct: 420  ETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQCLIQWQGDK 479

Query: 1012 LVTVNGEEALLVSHLSSFSFIGADNVEGT-PFQGFTIEDKNTKRNEASISS 1061
            +  V  +  L + +  S+ F G   +EG+  +   T++D + K+ +  +S+
Sbjct: 480  IEIVPADSQLKMEN-PSYCFEGV--MEGSNVYTKDTVDDLDDKQGQGLMSA 527



 Score = 37.7 bits (86), Expect = 4.2
 Identities = 30/94 (31%), Positives = 39/94 (40%), Gaps = 15/94 (15%)

Query: 532 LLKKNLVQTRTAPPIPEKLPSWYRLDQT--CDFHEGGRGHNIETCYAFKSTVQKLINDGK 589
           LL++  +Q     P    +PS   L +   C +H  G  H    C  FK  +Q  I  GK
Sbjct: 148 LLREKQIQM----PASHTIPSAEELGKKRYCKWHNSG-SHTTNDCKVFKQQIQTAIEGGK 202

Query: 590 ITFTDS--APNVQTNPLPNHGAATVNMIEDCQKT 621
           I F DS     V  NP P      VNM+    +T
Sbjct: 203 IKFDDSKRPMKVDGNPFP------VNMVHTAGRT 230


>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
          Length = 1986

 Score =  701 bits (1810), Expect = 0.0
 Identities = 400/1104 (36%), Positives = 611/1104 (55%), Gaps = 58/1104 (5%)

Query: 1218 KKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQK 1277
            ++EI++ A+ E+++    I  L+   D+FAW   DMPG+  +++ H L +K +  P+KQ+
Sbjct: 924  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 979

Query: 1278 LRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKAS 1337
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 980  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1039

Query: 1338 PKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMP 1397
            PKD F LP ID +VDSTA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MP
Sbjct: 1040 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1099

Query: 1398 FGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLR 1457
            FGL NAGATYQR +   F   I + +E YVDD++VK+  ++D +  L++ F  +R ++++
Sbjct: 1100 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMK 1159

Query: 1458 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRF 1517
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K+V+   G +  +SRF
Sbjct: 1160 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1219

Query: 1518 ISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVL 1577
            +S +     P FKLL+K     W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1220 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1279

Query: 1578 ENSMGCVL-GQQDETG---RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYM 1633
               +  VL  +++E G   + +  IY++S+   + ++RY  ++K    +    ++L HY 
Sbjct: 1280 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYF 1339

Query: 1634 INHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQP 1693
              H+  +V+   P+  +       GRIA+W + L   DI  + + +IK   LAD +A   
Sbjct: 1340 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1395

Query: 1694 LEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLT 1753
              ++   + D P E+I +                    W + FDG+  + G G G VL++
Sbjct: 1396 --EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVLIS 1433

Query: 1754 PKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWET 1813
            P G  + +   + F  ++N+AEYEA + G+  AI L IK + + GDS LV+NQ+  +W  
Sbjct: 1434 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1493

Query: 1814 LHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVN------HHNDVP 1867
            +   ++ YR   R+L   F+ +EL H+ R  N+ AD LA   S  +         H   P
Sbjct: 1494 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYTP 1553

Query: 1868 LISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFL 1926
             +  K  D        +VV  +  W      FL ++E P    +KD+ + + R S  + +
Sbjct: 1554 TVPHK--DTTQDADTHDVVMVEADWREPFIRFLSSQELP---QDKDEAERISRRSKLYVM 1608

Query: 1927 NGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMES 1986
            +   LYK++   +L RCV   E   L+ +IH G  G H    T+  K  R G++W T  S
Sbjct: 1609 HESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVS 1668

Query: 1987 DCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVA 2046
            D  K  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VA
Sbjct: 1669 DADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVA 1727

Query: 2047 IDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKELCDDFK 2106
            ID F+KW+EA     +T      F  N I+ R+G+PNRIITDNGT     + K+ C+DF 
Sbjct: 1728 IDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFG 1786

Query: 2107 IEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVVTYKDWHEMLPFALHGYRTSVRT 2161
            I+   +S   P  NG VE AN  I      R+  ++      W + LP  L   RT+   
Sbjct: 1787 IKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSR 1846

Query: 2162 STGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCH 2221
            +TG +PF LVYG EA+LP EVE  SLR     +  E  + ++R D L+ +EE R  AL  
Sbjct: 1847 ATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIQ 1903

Query: 2222 GQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGA 2281
               Y + +++  ++ VR R F  GDLVL+KI + +   R K +P +EGP+++      G+
Sbjct: 1904 SARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGS 1961

Query: 2282 MTLQTMDGEELPRPVNTDAVKKYF 2305
              L+  DG  +    N + +++++
Sbjct: 1962 YRLKREDGTLVDNSWNIEHLRRFY 1985



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 16/241 (6%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ +EY +R+ +   ++S 
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLREYIRRFSEQRNKISD 547

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 548 -ISDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 603

Query: 378 -LVKNTTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNN 436
                 TP +G   + NH  RK++ E  + T     +          I  +  P    +N
Sbjct: 604 SWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQRSRVNTFDKIMNSQCPHHPNSN 663

Query: 437 H 437
           H
Sbjct: 664 H 664



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 784  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 844  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
          Length = 1986

 Score =  699 bits (1804), Expect = 0.0
 Identities = 399/1104 (36%), Positives = 609/1104 (55%), Gaps = 58/1104 (5%)

Query: 1218 KKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQK 1277
            ++EI++ A+ E+++    I  L+   D+FAW   DMPG+  +++ H L +K +  P+KQ+
Sbjct: 924  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 979

Query: 1278 LRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKAS 1337
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 980  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1039

Query: 1338 PKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMP 1397
            PKD F LP ID +VDSTA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MP
Sbjct: 1040 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1099

Query: 1398 FGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLR 1457
            FGL NAGATYQR +   F   I + +E YVDD++VK+  ++D +  L++ F  +R ++++
Sbjct: 1100 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMK 1159

Query: 1458 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRF 1517
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K+V+   G +  +SRF
Sbjct: 1160 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1219

Query: 1518 ISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVL 1577
            +S +     P FKLL+K     W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1220 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1279

Query: 1578 ENSMGCVL-GQQDETG---RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYM 1633
               +  VL  +++E G   + +  IY++S+   + ++RY  ++K    +    ++L HY 
Sbjct: 1280 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKARYPQVQKLLYGILITTRKLSHYF 1339

Query: 1634 INHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQP 1693
              H+  +V+   P+  +       GRIA+W + L   DI  + + +IK   LAD +A   
Sbjct: 1340 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1395

Query: 1694 LEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLT 1753
              ++   + D P E+I +                    W + FDG+  + G G G VL++
Sbjct: 1396 --EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVLIS 1433

Query: 1754 PKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWET 1813
            P G  + +   + F  ++N+AEYEA + G+  AI L IK + + GDS LV+NQ+  +W  
Sbjct: 1434 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1493

Query: 1814 LHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVN------HHNDVP 1867
            +   ++ YR   R+L   F+ +EL H+ R  N+ AD LA   S  +         H   P
Sbjct: 1494 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKRETAPSDVFVEHLYTP 1553

Query: 1868 LISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFL 1926
             +  K  D         +   +  W      FL ++E P    +KD+ + + R S  + L
Sbjct: 1554 TVPHK--DTTQDADTRNIAMVEADWREPFIRFLTSQELP---QDKDEAERISRRSKLYVL 1608

Query: 1927 NGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMES 1986
            +   LYK++   +L RCV   E   L+ +IH G  G H    T+  K  R G++W T  S
Sbjct: 1609 HESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVS 1668

Query: 1987 DCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVA 2046
            D  K  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VA
Sbjct: 1669 DADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVA 1727

Query: 2047 IDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKELCDDFK 2106
            ID F+KW+EA     +T      F  N I+ R+G+PNRIITDNGT     + K+ C+DF 
Sbjct: 1728 IDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFG 1786

Query: 2107 IEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVVTYKDWHEMLPFALHGYRTSVRT 2161
            I+   +S   P  NG VE AN  I      R+  ++      W + LP  L   RT+   
Sbjct: 1787 IKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSR 1846

Query: 2162 STGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCH 2221
            +TG +PF LVYG EA+LP EVE  SLR     +  E  + ++R D L+ +EE R  AL  
Sbjct: 1847 ATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQ 1903

Query: 2222 GQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGA 2281
               Y + +++  ++ VR R F  GDLVL+KI + +   R K +P +EGP+++      G+
Sbjct: 1904 SARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGS 1961

Query: 2282 MTLQTMDGEELPRPVNTDAVKKYF 2305
              L+  DG  +    N + +++++
Sbjct: 1962 YRLKREDGTLVDNSWNIEHLRRFY 1985



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 53/241 (21%), Positives = 96/241 (38%), Gaps = 16/241 (6%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 547

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 548 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 603

Query: 378 -LVKNTTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNN 436
                 TP +G   + NH  RK++ E  + T     +          I  +  P    +N
Sbjct: 604 SWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQRSRVNTFDKIMNSQCPHHPNSN 663

Query: 437 H 437
           H
Sbjct: 664 H 664



 Score = 44.3 bits (103), Expect = 0.045
 Identities = 28/104 (26%), Positives = 48/104 (45%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 784  LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LG P + +  AV    +  +K
Sbjct: 844  RENFRTENISFEVADFETAYHAILGHPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
          Length = 2026

 Score =  697 bits (1800), Expect = 0.0
 Identities = 397/1078 (36%), Positives = 597/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
              ++P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1037 EVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +V        H   P +  K  D        +V   +  W 
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHK--DTTQVAGTHDVAMVEADWR 1608

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1609 EPLIRFLTSQELP---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1665

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1666 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1725

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1726 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAPDFFI 1784

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1785 N-IVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERANGMILQ 1843

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W E LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1844 GIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1903

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1904 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1960

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1961 VLRKIQTTR--DRHKLSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2016



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D + +  Y   +L   A  W   
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 492 LPRGTIGSWAELRDHFIANFQGTFERPGTQFDLYNVVQKSGESLRDYIRRFSEQRNKISD 551

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 552 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 607

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKEQE--VGMVTHGGPQQT 414
               K  TP +G   + NH  RK++ E  V    H   Q++
Sbjct: 608 SWKPKKDTPATGGGGSNNHKDRKRKPEELVATAIHSSRQRS 648



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 789  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 849  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  697 bits (1798), Expect = 0.0
 Identities = 399/1078 (37%), Positives = 598/1078 (55%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 973  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1032

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1033 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1092

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1093 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1152

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1153 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1212

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1213 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1272

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1273 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1332

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I     + GR
Sbjct: 1333 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREVNGR 1391

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1392 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1438

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1439 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1486

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1487 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRKLEDKFDGLELSH 1546

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +         H   P +  K   + A    A +V  D  W 
Sbjct: 1547 VLRHNNEAADRLANFGSKREAAPSDVFVEHLYTPTVPHKDTTQVAGTHDAAMVEVD--WR 1604

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + L+   LYK++   +L RCV   E   L
Sbjct: 1605 EPLIRFLTSQELP---QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQL 1661

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1662 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1721

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1722 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1780

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1781 N-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1839

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1840 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1899

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1900 RF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDL 1956

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1957 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2012



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/221 (22%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 547

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 548 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 603

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKE--QEVGMVTHGGPQQT 414
                  TP +G   + NH  RK++  + V   +H   Q++
Sbjct: 604 SWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRS 644



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 785  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 845  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
          Length = 2010

 Score =  697 bits (1798), Expect = 0.0
 Identities = 396/1078 (36%), Positives = 596/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 970  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1029

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1030 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGRELLSFL 1089

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1090 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1149

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKL+GF+VS +GI+
Sbjct: 1150 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVSHRGIQ 1209

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1210 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1269

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1270 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1329

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1330 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1388

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1389 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1435

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1436 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1483

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1484 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1543

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +V        H   P +  K  D        +V   +  W 
Sbjct: 1544 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHK--DTTQVAGTHDVAMVETDWR 1601

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1602 EPLIRFLTSQELP---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1658

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1659 LQDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1718

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1719 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1777

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1778 N-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1836

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1837 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1896

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1897 RF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDL 1953

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1954 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2009



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/221 (22%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 425 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 484

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 485 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 544

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 545 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPMTVKLMFEKANEYAKAEDAVTASKQSGP 600

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKE--QEVGMVTHGGPQQT 414
                  TP +G   + NH  RK++  + V   +H   Q++
Sbjct: 601 SWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRS 641



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 782  LRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 841

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 842  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 885


>UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]
          Length = 1991

 Score =  696 bits (1796), Expect = 0.0
 Identities = 395/1103 (35%), Positives = 607/1103 (54%), Gaps = 56/1103 (5%)

Query: 1218 KKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQK 1277
            ++EI++ A+ E+++    I  L+   D+FAW   DMPG+  +++ H L +K +  P+KQ+
Sbjct: 929  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 984

Query: 1278 LRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKAS 1337
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 985  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1044

Query: 1338 PKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMP 1397
            PKD F LP ID +VDSTA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MP
Sbjct: 1045 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1104

Query: 1398 FGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLR 1457
            FGL NAGATYQR +   F   I + +E YVDD++VK+  ++D +  L++ F  +R ++++
Sbjct: 1105 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAFRMK 1164

Query: 1458 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRF 1517
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K+V+   G +  +SRF
Sbjct: 1165 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1224

Query: 1518 ISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVL 1577
            +S +     P FKLL+K     W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1225 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1284

Query: 1578 ENSMGCVL-GQQDETG---RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYM 1633
               +  VL  +++E G   + +  IY++S+   + ++RY  ++K    +    ++L HY 
Sbjct: 1285 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYF 1344

Query: 1634 INHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQP 1693
              H+  +V+   P+  +       GRIA+W + L   DI  + + +IK   LAD +A   
Sbjct: 1345 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1400

Query: 1694 LEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLT 1753
              ++   + D P E+I +                    W + FDG+  + G G G VL++
Sbjct: 1401 --EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVLIS 1438

Query: 1754 PKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWET 1813
            P G  + +   + F  ++N+AEYEA + G+  AI L IK + + GDS LV+NQ+  +W  
Sbjct: 1439 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1498

Query: 1814 LHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVN------HHNDVP 1867
            +   ++ YR   R+L   F+ +EL H+ R  N+ AD LA   S  +         H   P
Sbjct: 1499 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYSP 1558

Query: 1868 LISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDKKTLRRLSSNFFLN 1927
             +  K  D        ++   +  W   +  FL ++E P      ++  + R S  + ++
Sbjct: 1559 TVPHK--DATQVADTHDIAMVEADWREPLIRFLTSQELPQYKDEAER--ISRRSKLYVMH 1614

Query: 1928 GDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESD 1987
               LYK++   +L RCV   E   L+ +IH G  G H    T+  K  R G++W T  SD
Sbjct: 1615 EAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSD 1674

Query: 1988 CYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAI 2047
              K  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + +AI
Sbjct: 1675 ADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFMAI 1733

Query: 2048 DYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKI 2107
            D F+KW+EA     +T      F  N I+ R+G+PNRIITDNGT     + K+ C+DF I
Sbjct: 1734 DKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGI 1792

Query: 2108 EHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTS 2162
            +   +S   P  NG VE AN  I      R+  ++      W   LP  L   RT+   +
Sbjct: 1793 KICYASVAHPMSNGQVERANGMILQRIKARVFDRLKPYAGKWVSQLPSVLWSLRTTPSRA 1852

Query: 2163 TGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHG 2222
            TG +PF LVYG EA+LP EVE  SLR     +  E  + ++R D L+ +EE R  AL   
Sbjct: 1853 TGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQS 1909

Query: 2223 QLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAM 2282
              Y + +++  ++ VR R F  GDLVL+KI + +   R K +P +EGP+++      G+ 
Sbjct: 1910 ARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSY 1967

Query: 2283 TLQTMDGEELPRPVNTDAVKKYF 2305
             L+  DG  +    N + +++++
Sbjct: 1968 RLKREDGTLVDNSWNIEHIRRFY 1990



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 16/241 (6%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 433 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 492

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ +EY +R+ +   ++S 
Sbjct: 493 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLREYIRRFSEQRNKISD 552

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 553 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 608

Query: 378 -LVKNTTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNN 436
                 TP +G   + NH  RK++ E  + T     +          I  +  P    +N
Sbjct: 609 SWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQRSRVNTFDKIMNSQCPHHPNSN 668

Query: 437 H 437
           H
Sbjct: 669 H 669



 Score = 46.2 bits (108), Expect = 0.012
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 789  LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 849  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  695 bits (1794), Expect = 0.0
 Identities = 397/1078 (36%), Positives = 596/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+  MCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M +P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1212 ANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDSFRWGPE 1271

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1272 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1331

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1332 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1390

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1391 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1437

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1438 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1485

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1486 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1545

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +         H   P +  K  D      A +V   +  W 
Sbjct: 1546 VLRHNNEAADRLANFGSKREAAPSDVFVEHLYSPTVPHK--DATQAAGAHDVAMVEADWR 1603

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + L+   LYK++   +L RCV   E   L
Sbjct: 1604 EPLIRFLTSQELP---QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQL 1660

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1661 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1720

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1721 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1779

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1780 N-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1838

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1839 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFESL 1898

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1899 RF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDL 1955

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1956 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2011



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/221 (22%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 427 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 486

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 487 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 546

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 547 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 602

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKE--QEVGMVTHGGPQQT 414
                  TP +G   + NH  RK++  + V   +H   Q++
Sbjct: 603 SWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRS 643



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 784  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 844  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]
          Length = 1950

 Score =  695 bits (1794), Expect = 0.0
 Identities = 397/1078 (36%), Positives = 595/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 910  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 969

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 970  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1029

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1030 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1089

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1090 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1149

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1150 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1209

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPPIL  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1210 AQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1269

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1270 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1328

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1329 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1375

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1376 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1423

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1424 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1483

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  ++        H   P +  K  D        +V   +  W 
Sbjct: 1484 VLRHNNEAADRLANFGSKREMAPSDVFVEHLYTPTVPHK--DTTQDADTHDVALVEADWR 1541

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
                 FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1542 EPFIRFLTSQELP---QDKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSLEEGRQL 1598

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1599 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1658

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1659 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1717

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1718 N-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1776

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1777 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1836

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1837 RF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDL 1893

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1894 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1949



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/221 (22%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 365 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 424

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 425 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 484

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 485 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYTKAEDAVTASKQSGP 540

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKE--QEVGMVTHGGPQQT 414
                  TP +G   + NH  RK++  + V   +H   Q++
Sbjct: 541 SWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRS 581



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 722  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 781

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 782  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 825


>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
          Length = 2017

 Score =  695 bits (1794), Expect = 0.0
 Identities = 397/1078 (36%), Positives = 594/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK  PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFHWGPE 1276

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEDGHVQKVQRPIY 1336

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H   +V+   P+  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PLGDILHNREANGR 1395

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKVEH-------- 1442

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +V        H   P +  K  D        +V   +  W 
Sbjct: 1551 VLRHNNKAADRLANFGSKREVAPSDVFVEHLYAPTVPHK--DTTQVAGTHDVAMVEADWR 1608

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1609 EPLIRFLTSQELP---QDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1665

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1666 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1725

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1726 QTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1784

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1785 N-IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1843

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W E LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1844 GIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1903

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1904 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1960

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1961 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLIDNSWNIEHLRRFY 2016



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 52/221 (23%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D + +  Y   +L   A  W   
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I+++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 492 LPRGTIESWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 551

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 552 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 607

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKEQE--VGMVTHGGPQQT 414
                  TP +G   + NH  RK++ E  V   TH   Q++
Sbjct: 608 SWKPNKGTPATGGGGSNNHKDRKRKPEELVATATHSSRQRS 648



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 789  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 849  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q60DU9 Putative polyprotein [Oryza sativa]
          Length = 1953

 Score =  694 bits (1791), Expect = 0.0
 Identities = 397/1099 (36%), Positives = 604/1099 (54%), Gaps = 79/1099 (7%)

Query: 1218 KKEIKVGASLETSVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQK 1277
            ++EI++ A+ E+++    I  L+   D+FAW   DMPG+  +++ H L +K +  P+KQ+
Sbjct: 924  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 979

Query: 1278 LRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKAS 1337
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 980  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1039

Query: 1338 PKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMP 1397
            PKD F LP ID +VDSTA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MP
Sbjct: 1040 PKDPFGLPRIDQVVDSTASCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1099

Query: 1398 FGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLR 1457
            FGL NAGATYQR +   F   I + +E YVDD++VK+  ++D +  L++ F  +R ++++
Sbjct: 1100 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMK 1159

Query: 1458 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRF 1517
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K+V+   G +  +SRF
Sbjct: 1160 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1219

Query: 1518 ISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVL 1577
            +S +     P FKLL+K     W  + Q+AF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1220 VSRLGERGMPFFKLLKKTDNFQWGPEAQRAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1279

Query: 1578 ENSMGCVL-GQQDETG---RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAAKRLRHYM 1633
               +  VL  +++E G   + +  IY++S+   + ++RY  ++K    +    ++L HY 
Sbjct: 1280 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYF 1339

Query: 1634 INHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILADHLAHQP 1693
              H+  +V+   P+  +       GRIA+W + L   DI  + + +IK   LAD +A   
Sbjct: 1340 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1395

Query: 1694 LEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLT 1753
              ++   + D P E+I +                    W + FDG+  + G G G VL++
Sbjct: 1396 --EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVLIS 1433

Query: 1754 PKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWET 1813
            P G  + +   + F  ++N+AEYEA + G+  AI L IK + + GDS LV+NQ+  +W  
Sbjct: 1434 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1493

Query: 1814 LHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVNHHNDVPLISVKF 1873
            +   ++ YR   R+L   F+ +EL H+ R  N+ AD LA   S               K 
Sbjct: 1494 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGS---------------KR 1538

Query: 1874 LDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILY 1932
               P+ VF    +F DK                    +KD+ + + R S  + ++   LY
Sbjct: 1539 EAAPSDVFRRTPLFPDKL-----------------PQDKDEAERISRRSKLYVMHESELY 1581

Query: 1933 KRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHT 1992
            KR+   +L RCV   E   L+ +IH G  G H    T+  K  R G++W T  SD  K  
Sbjct: 1582 KRSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIV 1641

Query: 1993 RKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTK 2052
            R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+K
Sbjct: 1642 RTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSK 1700

Query: 2053 WVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNS 2112
            W+EA     +T      F  N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +
Sbjct: 1701 WIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYA 1759

Query: 2113 SPYRPQMNGAVEAANKNI-----KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATP 2167
            S   P  NG VE AN  I      R+  ++      W + LP  L   RT+   +TG +P
Sbjct: 1760 SVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSP 1819

Query: 2168 FSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQK 2227
            F LVYG EA+LP EVE  SLR     +  E  + ++R D L+ +EE R  AL     Y +
Sbjct: 1820 FFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQ 1876

Query: 2228 RMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTM 2287
             +++  ++ VR R F  GDLVL+KI + +   R K +P +EGP+++      G+  L+  
Sbjct: 1877 GLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKRE 1934

Query: 2288 DGEELPRPVNTDAVKKYFV 2306
            DG  +    N + +++++V
Sbjct: 1935 DGTLVDNSWNIEHLRRFYV 1953



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 53/241 (21%), Positives = 96/241 (38%), Gaps = 16/241 (6%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKPGESLRDYIRRFSEQRNKISD 547

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 548 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 603

Query: 378 -LVKNTTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNN 436
                 TP +G   + NH  RK++ E  + T     +          I  +  P    +N
Sbjct: 604 SWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQRSRVNTFDKIMNSQCPHHPNSN 663

Query: 437 H 437
           H
Sbjct: 664 H 664



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 784  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 844  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]
          Length = 2017

 Score =  693 bits (1788), Expect = 0.0
 Identities = 397/1078 (36%), Positives = 597/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLILDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVLG-QQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   D+  + + +IK   LAD +A          ++    E+    KM+    
Sbjct: 1396 IAKWALELMSLDLSFKPRISIKSQALADFVA----------EWTECQEDTTVKKMEH--- 1442

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   +  YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMKAYRQEVRKLEDKFDGLELSH 1550

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R +N+ AD LA   S  +V        H   P +  K   + A +    +V  D  W 
Sbjct: 1551 VLRHDNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQAAGIHDVAMVETD--WR 1608

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1609 EPLIRFLTSQELP---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1665

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1666 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1725

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1726 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1784

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1785 N-IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1843

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1844 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1903

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1904 RF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDL 1960

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1961 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEYLRRFY 2016



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/221 (22%), Positives = 93/221 (41%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D++ +  Y   +L   A  W   
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 491

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 492 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 551

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 552 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGP 607

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKE--QEVGMVTHGGPQQT 414
                  TP +G   + NH  RK++  + V   +H   Q++
Sbjct: 608 SWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRS 648



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 789  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 849  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
          Length = 1756

 Score =  692 bits (1787), Expect = 0.0
 Identities = 395/1078 (36%), Positives = 594/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 716  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIK 775

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLNK  PKD F LP ID +VDSTA  ++ SF+
Sbjct: 776  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 835

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D +SGY+QI++   D  KTSFITP G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 836  DCYSGYHQIRLKESDCLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 895

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD+++K+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 896  EAYVDDVVIKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 955

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+KV AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 956  ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1015

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK+L EPP+L  P    PL++Y++     +  VL  +++E G   + +  IY
Sbjct: 1016 AQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1075

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY   H+  +V+   P+  I       GR
Sbjct: 1076 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1134

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1135 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1181

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1182 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1229

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1230 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1289

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +V        H   P +  K  D        +V   +  W 
Sbjct: 1290 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHK--DTTQIAGTHDVALVEADWR 1347

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
                 FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1348 EPFIRFLTSQELP---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1404

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1405 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1464

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1465 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1523

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1524 N-IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1582

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1583 GIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1642

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1643 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1699

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1700 VLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1755



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 215 FKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTNLDKTRI 274
           FK    EKY G++ PE  L +Y   + A   D + +  Y   +L   A  W   L +  I
Sbjct: 177 FKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGTI 236

Query: 275 QTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSPRIEEKE 334
           +++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S  I +  
Sbjct: 237 RSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD-ITDDV 295

Query: 335 MTKLFLKTLNHFYYKKMVGS-------TPKSFAEMVGMGVQLEEGVREGR------LVKN 381
           +   F K + H   +++VG        T K   E      + E+ V   +          
Sbjct: 296 IIAAFTKGIRH---EELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGPSWKPNK 352

Query: 382 TTPVSGTKKTGNHFPRKKEQE--VGMVTHGGPQQT 414
            TP +G   + NH  RK++ E  V   TH   Q++
Sbjct: 353 GTPATGGGGSNNHKDRKRKPEELVATATHSSRQRS 387



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 528  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 587

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 588  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 631


>UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]
          Length = 2008

 Score =  687 bits (1773), Expect = 0.0
 Identities = 405/1111 (36%), Positives = 607/1111 (54%), Gaps = 70/1111 (6%)

Query: 1213 GTKEDK-KEIKVGASLET-SVKKQVIELLKEYVDVFAWSYQDMPGLDTDIVVHHLPLKPE 1270
            G  E K K+I +  S  T + +  +I  L+   D+FAW   DMPG+  +++ H L +K +
Sbjct: 949  GESEAKTKKIPLDPSDPTKTAESALITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKED 1008

Query: 1271 CPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLITSNYPQWLANIVPVPKKDGKVRMCVDY 1330
              P+KQ+LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY
Sbjct: 1009 AKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDY 1068

Query: 1331 RDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGT 1390
             DLNK+ PKD F LP ID +VDSTA  ++ SF+D +SGY+QI++   D  KTSFITP+G 
Sbjct: 1069 TDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGA 1128

Query: 1391 FCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDHVKYLQKMFQR 1450
            +CY  MPFGL NAGATYQR +   F   I + +E YVDD++VK+  ++D +  L++ F  
Sbjct: 1129 YCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVS 1188

Query: 1451 LRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKEVRGFLGR 1510
            +R ++++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K+V+   G 
Sbjct: 1189 IRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGC 1248

Query: 1511 LNYISRFISHMTATCGPIFKLLRKEQGIVWTEDCQKAFDSIKKYLLEPPILIPPVEGRPL 1570
            +  +SRF+S +     P FKLL+K     W  + QKAF+  KK L EPP+L  P    PL
Sbjct: 1249 MAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPL 1308

Query: 1571 IMYLTVLENSMGCVLG-QQDETG---RKEHAIYYLSKKFTECESRYSMLEKTCCALAWAA 1626
            ++Y++     +  VL  +++E G   + +  IY++S+   + ++RY  ++K         
Sbjct: 1309 LLYVSATSQVVSTVLAVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQK--------- 1359

Query: 1627 KRLRHYMINHTTWLVSKMDPIKYIFEKPALTGRIARWQMLLSEYDIECRSQKAIKGSILA 1686
                  +  H+  +V+   P+  I       GRIA+W + L   DI  + + +IK   LA
Sbjct: 1360 -----LLYGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALA 1413

Query: 1687 DHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSVWGLIFDGAVNVYGNG 1746
            D +A     ++   + D P E + +                    W + FDG+  + G G
Sbjct: 1414 DFVA-----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTG 1448

Query: 1747 IGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVINQ 1806
             G VL++P G  + +   + F  ++N+AEYEA + G+  AI L IK + + GDS LV+NQ
Sbjct: 1449 AGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQ 1508

Query: 1807 IKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVN----- 1861
            +  +W  L   ++ YR   R+L   F+ +EL H+ R  N+ AD LA   S  +V      
Sbjct: 1509 VMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSDVF 1568

Query: 1862 -HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWFHDIKVFLQTREYPPGASNKDK-KTLRR 1919
              H   P +  K   + A      VV  D  W   +  FL ++E P    +KD+ + + R
Sbjct: 1569 VEHLYTPTVPHKDTTQVAGTHDVAVVETD--WREPLIRFLTSQELP---QDKDEAERISR 1623

Query: 1920 LSSNFFLNGDILYKRNFDTVLLRCVDKYEADLLIHEIHEGSFGIHPNGHTMAKKILRAGY 1979
             S  + ++   LYK++   +L RCV   E   L+ +IH G  G H    T+  K  R G+
Sbjct: 1624 RSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGF 1683

Query: 1980 YWMTMESDCYKHTRKCHKCQIYADKIHMPPTTLNLLSSPWPFSMWGIDMIGRIEPKASNG 2039
            +W T  SD  K  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G
Sbjct: 1684 FWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGG 1742

Query: 2040 HRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNNKMMK 2099
            +  + VAID F+KW+EA     +T      F  N I+ R+G+PNRIITDNGT     + K
Sbjct: 1743 YTHLFVAIDKFSKWIEAKPVVTITADNARDFFIN-IVHRFGVPNRIITDNGTQFTGGVFK 1801

Query: 2100 ELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVVTYKDWHEMLPFALHG 2154
            + C+DF I+   +S   P  NG VE AN  I      R+  ++      W + LP  L  
Sbjct: 1802 DFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWS 1861

Query: 2155 YRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEADLSEAEWVQNRYDQLNLIEEK 2214
             RT+   +TG +PF LVYG EA+LP EVE  SLR     +  E  + ++R D L+ +EE 
Sbjct: 1862 LRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEA 1918

Query: 2215 RMTALCHGQLYQKRMKQAFDKKVRPREFKEGDLVLKKIFSFQPDSRGKWAPNYEGPYVVK 2274
            R  AL     Y + +++  ++ VR R F  GDLVL+KI + +   R K +P +EGP+++ 
Sbjct: 1919 REAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIIS 1976

Query: 2275 RAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
                 G+  L+  DG  +    N + +++++
Sbjct: 1977 EVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2007



 Score = 45.8 bits (107), Expect = 0.015
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 785  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 845  RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q93Y89 Gag-pol [Oryza sativa]
          Length = 2017

 Score =  687 bits (1772), Expect = 0.0
 Identities = 393/1078 (36%), Positives = 593/1078 (54%), Gaps = 54/1078 (5%)

Query: 1244 DVFAWSYQDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLI 1303
            D+FAW   DMPG+  +++ H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1304 TSNYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM 1363
               +P WLAN V V KK G+ RMCVDY DLN + PKD F LP ID +VDSTA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1364 DGFSGYNQIKMAPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEI 1423
            D + GY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + +
Sbjct: 1097 DCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1424 EVYVDDMIVKSVTEEDHVKYLQKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1483
            E YVDD++VK+  ++D +  L++ F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1484 VDPDKVKAIREMPAPRTEKEVRGFLGRLNYISRFISHMTATCGPIFKLLRKEQGIVWTED 1543
             +P+K+ AI  M  P T+K+V+   G +  +SRF+S +     P FKLL+K     W  D
Sbjct: 1217 ANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPD 1276

Query: 1544 CQKAFDSIKKYLLEPPILIPPVEGRPLIMYLTVLENSMGCVL-GQQDETG---RKEHAIY 1599
             QKAF+  KK L EPP+L  P    PL++Y+      +  VL  +++E G   + +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1600 YLSKKFTECESRYSMLEKTCCALAWAAKRLRHYMINHTTWLVSKMDPIKYIFEKPALTGR 1659
            ++S+   + ++RY  ++K    +    ++L HY  +H+  +V+    +  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTSFS-LGDILHNREANGR 1395

Query: 1660 IARWQMLLSEYDIECRSQKAIKGSILADHLAHQPLEDYRPIKFDFPDEEIMYLKMKDCDE 1719
            IA+W + L   DI  + + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1720 PLFGEGPDPDSVWGLIFDGAVNVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEAC 1779
                        W + FDG+  + G G G VL++P G  + +   + F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1780 IMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHH 1839
            + G+  AI L IK + + GDS LV+NQ+  +W  L   ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1840 IPRDENQMADALATLSSMIKVN------HHNDVPLISVKFLDRPAYVFAAEVVFDDKPWF 1893
            + R  N+ AD LA   S  +V        H   P +  K  D        +V   +  W 
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHK--DTTQIAGTHDVALVEADWR 1608

Query: 1894 HDIKVFLQTREYPPGASNKDK-KTLRRLSSNFFLNGDILYKRNFDTVLLRCVDKYEADLL 1952
              +  FL ++E P    +KD+ + + R S  + ++   LYK++   +L RCV   E   L
Sbjct: 1609 EPLIRFLTSQELP---QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1665

Query: 1953 IHEIHEGSFGIHPNGHTMAKKILRAGYYWMTMESDCYKHTRKCHKCQIYADKIHMPPTTL 2012
            + +IH G  G H    T+  K  R G++W T  SD  K  R C  CQ +A +IH+P   L
Sbjct: 1666 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1725

Query: 2013 NLLSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIK 2072
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1726 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFFI 1784

Query: 2073 NHIICRYGIPNRIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-- 2130
            N I+ R+G+PNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I  
Sbjct: 1785 N-IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1843

Query: 2131 ---KRIVQKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSL 2187
                R+  ++      W + LP  L   RT+   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1844 GIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1903

Query: 2188 RVLMEADLSEAEWVQNRYDQLNLIEEKRMTALCHGQLYQKRMKQAFDKKVRPREFKEGDL 2247
            R     +  E  + ++R D L+ +EE R  AL     Y + +++  ++ VR R F  GDL
Sbjct: 1904 RF---RNYREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1960

Query: 2248 VLKKIFSFQPDSRGKWAPNYEGPYVVKRAFSGGAMTLQTMDGEELPRPVNTDAVKKYF 2305
            VL+KI + +   R K +P +EGP+++      G+  L+  DG  +    N + +++++
Sbjct: 1961 VLRKIQTTR--DRHKLSPLWEGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2016



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 19/221 (8%)

Query: 209 VQVPHKFKIPDFEKYKGSSCPEEHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYTN 268
           V  P  FK    EKY G++ PE  L +Y   + A   D + +  Y   +L   A  W   
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 269 LDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVSP 328
           L +  I ++ +L + F+  +    +    + DL  + Q   E+ ++Y +R+ +   ++S 
Sbjct: 492 LPRGTIGSWAELRDHFIANFQGTFEHPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 551

Query: 329 RIEEKEMTKLFLKTLNHFYYKKMVG-------STPKSFAEMVGMGVQLEEGVREGR---- 377
            I +  +   F K + H   +++VG        T K   E      + E+ V   +    
Sbjct: 552 -ITDDVIIAAFTKGIRH---EELVGKFGRKPPKTVKLMFEKANEYAKAEDAVTASKQSGP 607

Query: 378 --LVKNTTPVSGTKKTGNHFPRKKEQE--VGMVTHGGPQQT 414
                  TP  G   + NH  RK++ E  V   TH   Q +
Sbjct: 608 SWKPNKGTPAKGGGGSNNHKDRKRKPEELVATATHSSRQHS 648



 Score = 45.1 bits (105), Expect = 0.026
 Identities = 29/104 (27%), Positives = 49/104 (46%), Gaps = 5/104 (4%)

Query: 907  LSNVLVDTGSSLNVLSKTTYTQLAYQGAPLRRSGVMVKA-FDGSRKDVLGEVVLPITVGP 965
            L   L+D GS+LN+L   T   +    + L+ S         G     LG++ LP+T G 
Sbjct: 789  LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 966  Q----VFQVNFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLK 1005
            +       ++F+V D + +Y  +LGRP + +  AV    +  +K
Sbjct: 849  RENFRTENISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMK 892


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,041,977,706
Number of Sequences: 2790947
Number of extensions: 185068218
Number of successful extensions: 953464
Number of sequences better than 10.0: 30767
Number of HSP's better than 10.0 without gapping: 6988
Number of HSP's successfully gapped in prelim test: 24083
Number of HSP's that attempted gapping in prelim test: 699423
Number of HSP's gapped (non-prelim): 95462
length of query: 2306
length of database: 848,049,833
effective HSP length: 144
effective length of query: 2162
effective length of database: 446,153,465
effective search space: 964583791330
effective search space used: 964583791330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)