BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148240.10 - phase: 0 /pseudo
         (1012 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8X4F8 YjgL protein [Escherichia coli O157:H7]               42  0.072
UniRef100_Q8X2N3 Hypothetical protein ECs5230 [Escherichia coli ...    39  0.79
UniRef100_UPI0000467561 UPI0000467561 UniRef100 entry                  37  3.9
UniRef100_Q97TJ9 Membrane protein [Clostridium acetobutylicum]         36  6.7

>UniRef100_Q8X4F8 YjgL protein [Escherichia coli O157:H7]
          Length = 596

 Score = 42.4 bits (98), Expect = 0.072
 Identities = 22/46 (47%), Positives = 31/46 (66%)

Query: 436 QVQLILKMHQNLINLLILKSIQKLNLVQKLKSLQKLSLIQKQKLVQ 481
           ++  +L  HQ L NL  L ++QKLN +QKL +LQKL+ IQK   +Q
Sbjct: 181 EIARLLNNHQKLNNLQKLNNLQKLNNLQKLNNLQKLNNIQKLNNIQ 226


>UniRef100_Q8X2N3 Hypothetical protein ECs5230 [Escherichia coli O157:H7]
          Length = 590

 Score = 38.9 bits (89), Expect = 0.79
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 436 QVQLILKMHQNLINLLILKSIQKLNLVQKLKSLQKLSLIQK 476
           ++  +L  HQ L NL  L ++QKLN +QKL ++QKL+ IQ+
Sbjct: 181 EIARLLNNHQKLNNLQKLNNLQKLNNLQKLNNIQKLNNIQE 221


>UniRef100_UPI0000467561 UPI0000467561 UniRef100 entry
          Length = 768

 Score = 36.6 bits (83), Expect = 3.9
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 437 VQLILKMHQNLINLLILKSIQKLNLVQKLKSLQKLSLIQKQK-LVQ*NRMKMLLRMFKIT 495
           +  +LK     INLL LK IQ + L+ K  SL+ +S+ +K + L++  + +  L+  K  
Sbjct: 381 INKVLKECNKEINLLYLKKIQAIKLI-KYISLKIVSITEKNRILIEIRKKERKLKKQKKI 439

Query: 496 LSRLFSQNSNTNLHILRS*SLEAKIVLEEQDHISDKKSL 534
             +  +Q  N N+        E KI+LE+ +  + KK +
Sbjct: 440 YGKQINQIENDNIACAE----EIKILLEQLESHNQKKQM 474


>UniRef100_Q97TJ9 Membrane protein [Clostridium acetobutylicum]
          Length = 1058

 Score = 35.8 bits (81), Expect = 6.7
 Identities = 19/54 (35%), Positives = 26/54 (47%)

Query: 959  NISWKTIRLMLTVFPFFVIILLLSVCQRIQFYIQEPSILRSNTILSETMFKKGF 1012
            N +W+    + T +PFF +IL+L+VC    FY    S      I S     KGF
Sbjct: 359  NKAWEKAATISTKYPFFALILVLAVCGLSYFYTSSLSFNNLKEIASNYPSVKGF 412


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.359    0.160    0.523 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,244,408,274
Number of Sequences: 2790947
Number of extensions: 41689660
Number of successful extensions: 160963
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 160951
Number of HSP's gapped (non-prelim): 8
length of query: 1012
length of database: 848,049,833
effective HSP length: 138
effective length of query: 874
effective length of database: 462,899,147
effective search space: 404573854478
effective search space used: 404573854478
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 80 (35.4 bits)