BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147471.11 - phase: 0 /pseudo
(1453 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q04358 Potato DNA for copia-like transposable element ... 101 1e-19
UniRef100_Q84M55 Putative polyprotein [Oryza sativa] 97 4e-18
UniRef100_Q850H7 Gag-pol polyprotein [Vitis vinifera] 97 5e-18
UniRef100_Q850I3 Gag-pol polyprotein [Vitis vinifera] 96 6e-18
UniRef100_Q850I4 Gag-pol polyprotein [Vitis vinifera] 96 8e-18
UniRef100_Q7XPF2 OSJNBa0060N03.9 protein [Oryza sativa] 96 8e-18
UniRef100_Q851Y3 Putative polyprotein [Oryza sativa] 95 1e-17
UniRef100_Q7Y165 Putative retrotransposon protein [Oryza sativa] 95 2e-17
UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa] 95 2e-17
UniRef100_Q8W153 Polyprotein [Oryza sativa] 95 2e-17
UniRef100_Q8LNV0 Putative copia-like polyprotein [Oryza sativa] 94 4e-17
UniRef100_Q7XPF3 OSJNBa0060N03.8 protein [Oryza sativa] 94 4e-17
UniRef100_Q6L3Q0 Putative polyprotein [Solanum demissum] 89 8e-16
UniRef100_O65452 LTR retrotransposon like protein [Arabidopsis t... 88 2e-15
UniRef100_Q9FL75 Retroelement pol polyprotein-like [Arabidopsis ... 88 2e-15
UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana] 88 2e-15
UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Sol... 87 5e-15
UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidop... 86 8e-15
UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum] 85 2e-14
UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidop... 84 2e-14
>UniRef100_Q04358 Potato DNA for copia-like transposable element [Solanum tuberosum]
Length = 675
Score = 101 bits (252), Expect = 1e-19
Identities = 49/114 (42%), Positives = 70/114 (60%), Gaps = 8/114 (7%)
Query: 464 YLATTFFLESIKTNREKVLLYHYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHK 523
+L +TF L KV+L+HY +G PSF ++ L P F+ + FQCE CE+AKH
Sbjct: 91 FLNSTFVLN-------KVMLWHYGLGHPSFYYLRHLLPQLFRNKNPSLFQCEFCEMAKHH 143
Query: 524 RVT-FSVSNKMSTFPFYLVHTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
T F ++ PF ++H++VWGPS + + G RWFVTFIDD T ++WV+ L
Sbjct: 144 VDTSFPSQRYQASKPFTMIHSDVWGPSRISTMFGKRWFVTFIDDHTRLSWVFLL 197
>UniRef100_Q84M55 Putative polyprotein [Oryza sativa]
Length = 1393
Score = 97.1 bits (240), Expect = 4e-18
Identities = 44/83 (53%), Positives = 62/83 (74%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ + L+CDNK AI+IA+NPVQHDRTKH+E+++ FIKEK+DSG++ Y+ S + LAD LT
Sbjct: 1310 DTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDSGVLRLEYIKSCEQLADCLT 1369
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L + + +K+GMIDI P
Sbjct: 1370 KGLGPSEIQSICNKMGMIDIFCP 1392
>UniRef100_Q850H7 Gag-pol polyprotein [Vitis vinifera]
Length = 326
Score = 96.7 bits (239), Expect = 5e-18
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
P +L+CDN+ A++IA NPV H+RTKH+EV+ HFI+EK++ L+ T YV + + L D+ TK
Sbjct: 244 PAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTDYVKTGEQLGDIFTK 303
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
LN E F +KLGMI+I++P
Sbjct: 304 ALNGTRVEYFCNKLGMINIYAP 325
>UniRef100_Q850I3 Gag-pol polyprotein [Vitis vinifera]
Length = 326
Score = 96.3 bits (238), Expect = 6e-18
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
P +L+CDN+ A++IA NPV H+RTKH+EV+ HFI+EK++ L+ T YV + + L D+ TK
Sbjct: 244 PAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTGYVKTGEQLGDIFTK 303
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
LN E F +KLGMI+I++P
Sbjct: 304 ALNGTRVEYFCNKLGMINIYAP 325
>UniRef100_Q850I4 Gag-pol polyprotein [Vitis vinifera]
Length = 326
Score = 95.9 bits (237), Expect = 8e-18
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
P +L+CDN+ A++IA NPV H+RTKH+EV+ HFI+EK++ L+ T YV + + L D+ TK
Sbjct: 244 PAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTGYVKTGEQLGDIFTK 303
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
LN E F +KLGMI+I++P
Sbjct: 304 ALNGTRVECFCNKLGMINIYAP 325
>UniRef100_Q7XPF2 OSJNBa0060N03.9 protein [Oryza sativa]
Length = 1045
Score = 95.9 bits (237), Expect = 8e-18
Identities = 41/98 (41%), Positives = 62/98 (62%)
Query: 479 EKVLLYHYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPF 538
+++ L H ++G PSF ++ +L+P F +D C+ CEL KH R T+ + PF
Sbjct: 407 KEISLLHCQLGHPSFEILSKLYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPF 466
Query: 539 YLVHTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
L+H++VWGP V ++SG +WFVTFID T +TW+Y L
Sbjct: 467 ILIHSDVWGPCPVTSVSGFKWFVTFIDCHTRMTWIYML 504
>UniRef100_Q851Y3 Putative polyprotein [Oryza sativa]
Length = 1299
Score = 95.1 bits (235), Expect = 1e-17
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
PM+L CDNK AINIA+NPVQHDRTKH+E+++ FIKEKLD G++ +V+S +AD LTK
Sbjct: 1217 PMKLLCDNKSAINIANNPVQHDRTKHVEIDRFFIKEKLDEGVLELGFVTSGGQVADCLTK 1276
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
L K+GMIDI+ P
Sbjct: 1277 GLGVKECNCSCDKMGMIDIYHP 1298
>UniRef100_Q7Y165 Putative retrotransposon protein [Oryza sativa]
Length = 1176
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/84 (53%), Positives = 59/84 (69%)
Query: 1370 DEPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLL 1429
D PM+L+CDNK AI+IA+NPVQHDRTKH+E+++ FIKEKLD G++ +V S +AD
Sbjct: 1092 DTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDEGVLELEFVMSGGQVADCF 1151
Query: 1430 TKRLNNNNFEKFVSKLGMIDIHSP 1453
TK L K+GMIDI+ P
Sbjct: 1152 TKGLGVKECNSSCDKMGMIDIYHP 1175
>UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa]
Length = 1262
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/84 (53%), Positives = 59/84 (69%)
Query: 1370 DEPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLL 1429
D PM+L+CDNK AI+IA+NPVQHDRTKH+E+++ FIKEKLD G++ +V S +AD
Sbjct: 1178 DTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDEGVLELEFVMSGGQVADCF 1237
Query: 1430 TKRLNNNNFEKFVSKLGMIDIHSP 1453
TK L K+GMIDI+ P
Sbjct: 1238 TKGLGVKECNSSCDKMGMIDIYHP 1261
>UniRef100_Q8W153 Polyprotein [Oryza sativa]
Length = 1472
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/84 (53%), Positives = 59/84 (69%)
Query: 1370 DEPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLL 1429
D PM+L+CDNK AI+IA+NPVQHDRTKH+E+++ FIKEKLD G++ +V S +AD
Sbjct: 1388 DTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDEGVLELEFVMSGGQVADCF 1447
Query: 1430 TKRLNNNNFEKFVSKLGMIDIHSP 1453
TK L K+GMIDI+ P
Sbjct: 1448 TKGLGVKECNSSCDKMGMIDIYHP 1471
Score = 81.6 bits (200), Expect = 2e-13
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 480 KVLLYHYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFY 539
+VLL H R+G SF ++ ++FP+ F +D C+ CE KH R ++ S PF
Sbjct: 500 EVLLLHCRLGHISFEIMSKMFPVEFSKVDKHMLICDACEYGKHTRTSYVSRGLRSILPFM 559
Query: 540 LVHTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
L+H++VW S V ++SG ++FVTFID + +TW+Y +
Sbjct: 560 LIHSDVW-TSPVVSMSGMKYFVTFIDCYSRMTWLYLM 595
>UniRef100_Q8LNV0 Putative copia-like polyprotein [Oryza sativa]
Length = 894
Score = 93.6 bits (231), Expect = 4e-17
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 1373 MRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTKR 1432
M+L+CDNK AINIA+NPVQHDRTKH+E+++ FIKE++D G + +V+S + + D LTK
Sbjct: 813 MKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDEGTLNLGFVNSGEQVVDSLTKA 872
Query: 1433 LNNNNFEKFVSKLGMIDIHSP 1453
L SK+GMIDI+ P
Sbjct: 873 LGARECTSSCSKMGMIDIYRP 893
Score = 68.9 bits (167), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (58%), Gaps = 1/81 (1%)
Query: 496 IKQLFPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFYLVHTNVWGPSNVPNIS 555
+ ++FP +D C+ CE KH R T+ S PF LVH++VW S + ++S
Sbjct: 1 MSKVFPDEMSKVDKSKLMCDACEYGKHTRTTYISRGLQSILPFVLVHSDVW-TSPIASVS 59
Query: 556 GARWFVTFIDDCTWVTWVYFL 576
GA++FVTFID + +TW+Y +
Sbjct: 60 GAKYFVTFIDCHSRMTWIYLM 80
>UniRef100_Q7XPF3 OSJNBa0060N03.8 protein [Oryza sativa]
Length = 343
Score = 93.6 bits (231), Expect = 4e-17
Identities = 42/83 (50%), Positives = 62/83 (74%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ + L+CDN+ AI+IA+NPVQHDRTKH+E+++ FIKEK++SG++ Y+ S + LAD LT
Sbjct: 260 DTVMLHCDNRSAISIANNPVQHDRTKHVEIDRFFIKEKINSGVLRLEYIKSCEQLADYLT 319
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L + + +K+GMIDI P
Sbjct: 320 KGLGPSEIQSICNKMGMIDIFFP 342
>UniRef100_Q6L3Q0 Putative polyprotein [Solanum demissum]
Length = 1336
Score = 89.4 bits (220), Expect = 8e-16
Identities = 41/80 (51%), Positives = 57/80 (71%)
Query: 1374 RLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTKRL 1433
+L+CDN+ A++IA NPV H+RTKH+EV+ HFI+EK+ LI T YV + + LADL TK L
Sbjct: 1256 KLWCDNQAALHIASNPVYHERTKHIEVDCHFIREKIQENLISTSYVKTGEQLADLFTKAL 1315
Query: 1434 NNNNFEKFVSKLGMIDIHSP 1453
+KLGMI+I++P
Sbjct: 1316 TGARVNYLCNKLGMINIYAP 1335
Score = 88.6 bits (218), Expect = 1e-15
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 485 HYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHKRVTFSV-SNKMSTFPFYLVHT 543
H R+G PS V+K+L P F +V S CE C AKH R++ S +NK + F F LVH+
Sbjct: 495 HCRLGHPSLPVLKKLCPQFH---NVPSIDCESCHFAKHHRISLSPRNNKRANFAFELVHS 551
Query: 544 NVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
+VWGP V + G R+FVTF+DD + +TW+YF+
Sbjct: 552 DVWGPCPVVSKVGFRYFVTFMDDFSRMTWIYFM 584
>UniRef100_O65452 LTR retrotransposon like protein [Arabidopsis thaliana]
Length = 1109
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/83 (46%), Positives = 59/83 (70%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ MR++ D+K AI ++ NPVQH+RTKH+EV+ HFI++ + G+I T +V S LAD+LT
Sbjct: 1026 QAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILT 1085
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L F+ KLG++D+H+P
Sbjct: 1086 KALGEKEVRYFLRKLGILDVHAP 1108
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 483 LYHYRVGDPSFRVIKQL-FPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFYLV 541
L+H R+G S +++ L L ++ C+ C AK R TF + + S F L+
Sbjct: 291 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLI 350
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFLHD*KSV*CEH*TD*IR*CQRLF*SQ 601
H +VWGP P+ SGAR+F+T +DD + WVY + D KS +H D + +R F ++
Sbjct: 351 HCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTD-KSETQKHLKDFMALVERQFDTE 409
Query: 602 FKFILS 607
K + S
Sbjct: 410 IKTVRS 415
>UniRef100_Q9FL75 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/83 (46%), Positives = 59/83 (70%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ MR++ D+K AI ++ NPVQH+RTKH+EV+ HFI++ + G+I T +V S LAD+LT
Sbjct: 1026 QAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILT 1085
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L F+ KLG++D+H+P
Sbjct: 1086 KALGEKEVRYFLRKLGILDVHAP 1108
Score = 75.1 bits (183), Expect = 1e-11
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 483 LYHYRVGDPSFRVIKQL-FPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFYLV 541
L+H R+G S +++ L L ++ C+ C AK R TF +S+ S F L+
Sbjct: 291 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLI 350
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFLHD*KSV*CEH*TD*IR*CQRLF*SQ 601
H +VWGP P+ SGAR+F+T +DD + WVY + D KS +H D I +R F ++
Sbjct: 351 HCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTD-KSETQKHLKDFIALVERQFDTE 409
Query: 602 FKFILS 607
K + S
Sbjct: 410 IKTVRS 415
>UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/83 (46%), Positives = 59/83 (70%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ MR++ D+K AI ++ NPVQH+RTKH+EV+ HFI++ + G+I T +V S LAD+LT
Sbjct: 1385 QAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILT 1444
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L F+ KLG++D+H+P
Sbjct: 1445 KALGEKEVRYFLRKLGILDVHAP 1467
Score = 75.9 bits (185), Expect = 9e-12
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 483 LYHYRVGDPSFRVIKQL-FPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFYLV 541
L+H R+G S +++ L L ++ C+ C AK R TF +S+ S F L+
Sbjct: 515 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLI 574
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFLHD*KSV*CEH*TD*IR*CQRLF*SQ 601
H +VWGP P+ SGAR+F+T +DD + WVY + D KS +H D I +R F ++
Sbjct: 575 HCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTD-KSETQKHLKDFIALVERQFDTE 633
Query: 602 FKFILS 607
K + S
Sbjct: 634 IKIVRS 639
>UniRef100_Q5XWR5 Putative retroelement pol polyprotein-like [Solanum tuberosum]
Length = 1476
Score = 86.7 bits (213), Expect = 5e-15
Identities = 41/88 (46%), Positives = 60/88 (67%)
Query: 1366 DKDFDEPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNL 1425
D P+ LYCD+K AI IA NPV H+RTKH++++ HFI+EK+ +GL+ Y+ +Q+
Sbjct: 1370 DMPLSLPVSLYCDSKAAIQIAANPVFHERTKHIDIDCHFIREKVQAGLVMIHYLPTQEQP 1429
Query: 1426 ADLLTKRLNNNNFEKFVSKLGMIDIHSP 1453
AD+LTK L++ VSKLG+ +I P
Sbjct: 1430 ADILTKGLSSAQHSYLVSKLGLKNIFIP 1457
Score = 61.2 bits (147), Expect = 2e-07
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 479 EKVLLYHYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHKRVTFSVSNKMSTFPF 538
E+ ++H R+G V++++ +F + C++C LA+ R+ F +S S F
Sbjct: 548 EEAEMWHKRLGHIPMSVLRKI-KMFDSPQKLVLPSCDVCPLARQVRLPFPISQSRSENCF 606
Query: 539 YLVHTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFLH 577
L+H +VWGP + R+F+T +DD + TW++ +H
Sbjct: 607 DLIHLDVWGPYKAATHNKMRYFLTVVDDHSRWTWIFLMH 645
>UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 85.9 bits (211), Expect = 8e-15
Identities = 39/82 (47%), Positives = 58/82 (70%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
P RLYCD+K AI+IA NPV H+RTKH+E + H +++ + G+I T +V + + LAD+ TK
Sbjct: 1419 PARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTK 1478
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
L N F +SKLG+ ++H+P
Sbjct: 1479 ALGRNQFLYLMSKLGVQNLHTP 1500
Score = 75.5 bits (184), Expect = 1e-11
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 483 LYHYRVGDPSFRVIKQLFPLFFKTLD-VESFQCELCELAKHKRVTFSVSNKMSTFPFYLV 541
L+H R+G PSF V+ L PLF KT V S C++C AK R F S + F L+
Sbjct: 529 LWHQRLGHPSFSVLSSL-PLFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLI 587
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
H +VWGP VP GA +F+T +DD + W Y L
Sbjct: 588 HCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLL 622
>UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]
Length = 1358
Score = 84.7 bits (208), Expect = 2e-14
Identities = 39/83 (46%), Positives = 56/83 (66%)
Query: 1371 EPMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLT 1430
+ M L CDN+ A++IA NPV H+RTKH+E++ HF++EK+ SG I T +V S D LAD+ T
Sbjct: 1275 DKMELVCDNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIVTKFVKSNDQLADIFT 1334
Query: 1431 KRLNNNNFEKFVSKLGMIDIHSP 1453
K L +KLG D+++P
Sbjct: 1335 KSLTCPRINYICNKLGTYDLYAP 1357
Score = 76.3 bits (186), Expect = 7e-12
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 483 LYHYRVGDPSFRVIKQLFPLFFKTLDVESFQCELCELAKHKRVTFSVSNK-MSTFPFYLV 541
L H R+G S ++++ P + + CE C+L KH R TFS S + S F LV
Sbjct: 487 LIHKRLGHSSLSKLQKMVP---SLSSLSTLDCESCQLGKHTRATFSRSTEGRSESIFSLV 543
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFLHD 578
H+++WGPS V + G R+FV+FIDD + TWV+ + D
Sbjct: 544 HSDIWGPSRVSSTLGFRYFVSFIDDYSKCTWVFLMKD 580
>UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/82 (46%), Positives = 58/82 (70%)
Query: 1372 PMRLYCDNKYAINIAHNPVQHDRTKHLEVNKHFIKEKLDSGLICTPYVSSQDNLADLLTK 1431
P RL+CD+K AI+IA NPV H+RTKH+E + H +++ + G+I T +V + + LAD+ TK
Sbjct: 1331 PTRLFCDSKAAISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTK 1390
Query: 1432 RLNNNNFEKFVSKLGMIDIHSP 1453
L N F +SKLG+ ++H+P
Sbjct: 1391 ALGRNQFIYLMSKLGIQNLHTP 1412
Score = 77.0 bits (188), Expect = 4e-12
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 483 LYHYRVGDPSFRVIKQLFPLFF-KTLDVESFQCELCELAKHKRVTFSVSNKMSTFPFYLV 541
L+H R+G PSF V+ L PLF + V S C++C AK R F S+ ST F L+
Sbjct: 512 LWHQRLGHPSFSVLSSL-PLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLI 570
Query: 542 HTNVWGPSNVPNISGARWFVTFIDDCTWVTWVYFL 576
H +VWGP VP+ GA +F+T +DD + W Y L
Sbjct: 571 HCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLL 605
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.364 0.163 0.626
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,974,857,087
Number of Sequences: 2790947
Number of extensions: 69105506
Number of successful extensions: 353468
Number of sequences better than 10.0: 681
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 351924
Number of HSP's gapped (non-prelim): 1458
length of query: 1453
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1313
effective length of database: 457,317,253
effective search space: 600457553189
effective search space used: 600457553189
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 81 (35.8 bits)
Medicago: description of AC147471.11