Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146853.8 + phase: 0 /partial
         (71 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q84J91 Hypothetical protein At5g24500 [Arabidopsis tha...    60  1e-08
UniRef100_Q9FLV2 Arabidopsis thaliana genomic DNA, chromosome 5,...    60  1e-08
UniRef100_Q5Z4Q7 Hypothetical protein B1156C07.28 [Oryza sativa]       34  1.1
UniRef100_Q6CQQ1 Similar to sp|P53261 Saccharomyces cerevisiae Y...    32  5.4
UniRef100_UPI00003156D9 UPI00003156D9 UniRef100 entry                  31  7.0
UniRef100_UPI000036E410 UPI000036E410 UniRef100 entry                  31  9.2
UniRef100_UPI0000223585 UPI0000223585 UniRef100 entry                  31  9.2
UniRef100_Q8IKC0 Hypothetical protein [Plasmodium falciparum]          31  9.2
UniRef100_Q8I225 Hypothetical protein PFA0655w [Plasmodium falci...    31  9.2
UniRef100_Q969N5 Hypothetical protein FLJ30023 [Homo sapiens]          31  9.2
UniRef100_Q9BVC3 Hypothetical protein MGC5528 [Homo sapiens]           31  9.2

>UniRef100_Q84J91 Hypothetical protein At5g24500 [Arabidopsis thaliana]
          Length = 334

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 7/60 (11%)

Query: 1   GFTKSEVTVIDTSCRVWKVDKFVF-RKNDWKIRERKQKNKFVA------KKKSKLTRELD 53
           GF++SEVTVIDTS ++WK +K VF R+N WK+RE+K K++ V+      KKK K  R+ D
Sbjct: 197 GFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKKGKSRVVSKLKKLMKKKKKKKRKCD 256


>UniRef100_Q9FLV2 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18P6
           [Arabidopsis thaliana]
          Length = 306

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 7/60 (11%)

Query: 1   GFTKSEVTVIDTSCRVWKVDKFVF-RKNDWKIRERKQKNKFVA------KKKSKLTRELD 53
           GF++SEVTVIDTS ++WK +K VF R+N WK+RE+K K++ V+      KKK K  R+ D
Sbjct: 197 GFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKKGKSRVVSKLKKLMKKKKKKKRKCD 256


>UniRef100_Q5Z4Q7 Hypothetical protein B1156C07.28 [Oryza sativa]
          Length = 304

 Score = 33.9 bits (76), Expect = 1.1
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKND-WKIRER 34
           +++EVTVIDTS   WK  K + R+   WK+R++
Sbjct: 194 SRTEVTVIDTSTDGWKAAKLLLRRGAVWKVRDK 226


>UniRef100_Q6CQQ1 Similar to sp|P53261 Saccharomyces cerevisiae YGR103w singleton
           [Kluyveromyces lactis]
          Length = 605

 Score = 31.6 bits (70), Expect = 5.4
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 15  RVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTR 50
           +++K  K+   K D KI + KQK K +AK K+KL +
Sbjct: 566 KLYKKMKYSNEKKDEKIEQLKQKKKQIAKTKAKLAK 601


>UniRef100_UPI00003156D9 UPI00003156D9 UniRef100 entry
          Length = 326

 Score = 31.2 bits (69), Expect = 7.0
 Identities = 18/66 (27%), Positives = 35/66 (52%), Gaps = 3/66 (4%)

Query: 5   SEVTVIDTSCRVWKVDKFV---FRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSK 61
           S VTVID S     +DK+V     K+D++   +++K+K    K +++   ++I    +  
Sbjct: 185 SSVTVIDVSSLKENIDKYVNEKILKSDYRQEAKRRKDKLELDKDAEIQESIEISEENNLA 244

Query: 62  YSFFNS 67
            S F++
Sbjct: 245 SSIFSN 250


>UniRef100_UPI000036E410 UPI000036E410 UniRef100 entry
          Length = 238

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 155

Query: 63  SFFNS 67
              NS
Sbjct: 156 KDSNS 160


>UniRef100_UPI0000223585 UPI0000223585 UniRef100 entry
          Length = 164

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 15 RVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSK 47
          R W+      ++N+WK++++K+K K   KKK K
Sbjct: 32 RCWRRKSGREKENEWKLKKKKKKKKKKKKKKKK 64


>UniRef100_Q8IKC0 Hypothetical protein [Plasmodium falciparum]
          Length = 1313

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 14  CRVWKVDKFVF---RKNDWKIRERKQKNKFVAKKKSKLTRE 51
           C+   ++K+ F    KN  +IR++K+KNK   KKK K  ++
Sbjct: 65  CKYRNIEKYKFANEEKNSEQIRKKKKKNKKKIKKKKKKKKD 105


>UniRef100_Q8I225 Hypothetical protein PFA0655w [Plasmodium falciparum]
          Length = 851

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 17/41 (41%), Positives = 23/41 (55%), Gaps = 2/41 (4%)

Query: 13  SCRVWKVDK-FVFRKNDWKIRERKQKNKFVAKKKSKLTREL 52
           SC+ WK +K F   KNDWK+ E K+ N    K    + +EL
Sbjct: 299 SCK-WKKEKWFEELKNDWKVEENKRLNCDSLKNNKDIYKEL 338


>UniRef100_Q969N5 Hypothetical protein FLJ30023 [Homo sapiens]
          Length = 393

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 155

Query: 63  SFFNS 67
              NS
Sbjct: 156 KDSNS 160


>UniRef100_Q9BVC3 Hypothetical protein MGC5528 [Homo sapiens]
          Length = 393

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 155

Query: 63  SFFNS 67
              NS
Sbjct: 156 KDSNS 160


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.323    0.135    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,766,005
Number of Sequences: 2790947
Number of extensions: 3890240
Number of successful extensions: 18046
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 18032
Number of HSP's gapped (non-prelim): 17
length of query: 71
length of database: 848,049,833
effective HSP length: 47
effective length of query: 24
effective length of database: 716,875,324
effective search space: 17205007776
effective search space used: 17205007776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)


Medicago: description of AC146853.8