BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146842.3 + phase: 0 /pseudo
(57 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q94KK8 Glutamate decarboxylase isozyme 3 [Nicotiana ta... 73 2e-12
UniRef100_Q8RVS4 Glutamate decarboxylase [Oryza sativa] 73 2e-12
UniRef100_Q6YSB2 Putative glutamate decarboxylase [Oryza sativa] 73 2e-12
UniRef100_Q684J8 Glutamate decarboxylase 1 [Lotus japonicus] 73 2e-12
UniRef100_Q9AQU4 Glutamate decarboxylase [Oryza sativa] 73 2e-12
UniRef100_Q42521 Glutamate decarboxylase 1 [Arabidopsis thaliana] 73 2e-12
UniRef100_Q944L6 At1g65960/F12P19_12 [Arabidopsis thaliana] 72 3e-12
UniRef100_Q8RXH0 Glutamate decarboxylase, putative [Arabidopsis ... 72 3e-12
UniRef100_Q7XV18 OSJNBa0064H22.6 protein [Oryza sativa] 72 3e-12
UniRef100_Q7XV14 OSJNBa0064H22.2 protein [Oryza sativa] 72 3e-12
UniRef100_Q6Q4I3 Glutamate decarboxylase 2 [Brassica juncea] 72 3e-12
UniRef100_Q6Q4I2 Glutamate decarboxylase 4a [Brassica juncea] 72 3e-12
UniRef100_Q6Q4I1 Glutamate decarboxylase 4b [Brassica juncea] 72 3e-12
UniRef100_Q9AR41 Glutamate decarboxylase [Oryza sativa] 72 3e-12
UniRef100_Q9ZPS3 Putative glutamate decarboxylase [Arabidopsis t... 72 3e-12
UniRef100_Q07346 Glutamate decarboxylase [Petunia hybrida] 72 3e-12
UniRef100_Q42472 Glutamate decarboxylase 2 [Arabidopsis thaliana] 72 3e-12
UniRef100_Q8LLP2 Putative glutamate carboxylase [Oryza sativa] 72 4e-12
UniRef100_Q6ASV4 Putative glutamate decarboxylase isozyme [Oryza... 72 4e-12
UniRef100_Q9ZPS4 Putative glutamate decarboxylase [Arabidopsis t... 72 4e-12
>UniRef100_Q94KK8 Glutamate decarboxylase isozyme 3 [Nicotiana tabacum]
Length = 491
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSRR 57
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWVIW +++
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKQ 294
>UniRef100_Q8RVS4 Glutamate decarboxylase [Oryza sativa]
Length = 282
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW S+
Sbjct: 39 FLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSK 78
>UniRef100_Q6YSB2 Putative glutamate decarboxylase [Oryza sativa]
Length = 497
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW S+
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSK 293
>UniRef100_Q684J8 Glutamate decarboxylase 1 [Lotus japonicus]
Length = 420
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/37 (86%), Positives = 32/37 (86%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWVIW
Sbjct: 254 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290
>UniRef100_Q9AQU4 Glutamate decarboxylase [Oryza sativa]
Length = 501
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW S+
Sbjct: 258 FLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSK 297
>UniRef100_Q42521 Glutamate decarboxylase 1 [Arabidopsis thaliana]
Length = 502
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/37 (86%), Positives = 32/37 (86%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWVIW
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290
>UniRef100_Q944L6 At1g65960/F12P19_12 [Arabidopsis thaliana]
Length = 494
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 253 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 289
>UniRef100_Q8RXH0 Glutamate decarboxylase, putative [Arabidopsis thaliana]
Length = 419
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 178 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 214
>UniRef100_Q7XV18 OSJNBa0064H22.6 protein [Oryza sativa]
Length = 500
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW
Sbjct: 256 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIW 292
>UniRef100_Q7XV14 OSJNBa0064H22.2 protein [Oryza sativa]
Length = 484
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW
Sbjct: 253 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIW 289
>UniRef100_Q6Q4I3 Glutamate decarboxylase 2 [Brassica juncea]
Length = 494
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
>UniRef100_Q6Q4I2 Glutamate decarboxylase 4a [Brassica juncea]
Length = 493
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
>UniRef100_Q6Q4I1 Glutamate decarboxylase 4b [Brassica juncea]
Length = 493
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
>UniRef100_Q9AR41 Glutamate decarboxylase [Oryza sativa]
Length = 500
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW
Sbjct: 256 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIW 292
>UniRef100_Q9ZPS3 Putative glutamate decarboxylase [Arabidopsis thaliana]
Length = 493
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
>UniRef100_Q07346 Glutamate decarboxylase [Petunia hybrida]
Length = 500
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
>UniRef100_Q42472 Glutamate decarboxylase 2 [Arabidopsis thaliana]
Length = 494
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 253 FIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 289
>UniRef100_Q8LLP2 Putative glutamate carboxylase [Oryza sativa]
Length = 513
Score = 72.0 bits (175), Expect = 4e-12
Identities = 32/40 (80%), Positives = 33/40 (82%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGW IW S+
Sbjct: 275 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWCIWRSK 314
>UniRef100_Q6ASV4 Putative glutamate decarboxylase isozyme [Oryza sativa]
Length = 492
Score = 72.0 bits (175), Expect = 4e-12
Identities = 32/40 (80%), Positives = 33/40 (82%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGW IW S+
Sbjct: 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWCIWRSK 293
>UniRef100_Q9ZPS4 Putative glutamate decarboxylase [Arabidopsis thaliana]
Length = 500
Score = 72.0 bits (175), Expect = 4e-12
Identities = 31/37 (83%), Positives = 32/37 (85%)
Query: 17 FPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIW 53
F Y LEWDFRLPLVKSINVSGHKYGL Y GIGWV+W
Sbjct: 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVVW 290
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.328 0.143 0.501
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,689,235
Number of Sequences: 2790947
Number of extensions: 3121493
Number of successful extensions: 8054
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7963
Number of HSP's gapped (non-prelim): 91
length of query: 57
length of database: 848,049,833
effective HSP length: 33
effective length of query: 24
effective length of database: 755,948,582
effective search space: 18142765968
effective search space used: 18142765968
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146842.3