BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.13 + phase: 0
(97 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI0000234F72 UPI0000234F72 UniRef100 entry 58 5e-08
UniRef100_Q6WJ26 Histidine kinase G2 [Emericella nidulans] 58 5e-08
UniRef100_Q9M8Y4 Two-component response regulator ARR22 [Arabido... 55 4e-07
UniRef100_Q6MQ95 Two component sensor histidine kinase [Bdellovi... 55 5e-07
UniRef100_O82445 Response regulator protein [Brassica napus] 54 9e-07
UniRef100_Q6LLE9 Putative BaeS, Signal transduction histidine ki... 53 2e-06
UniRef100_Q9KS16 Sensor histidine kinase/response regulator [Vib... 52 3e-06
UniRef100_Q74AN8 Sensory box histidine kinase/response regulator... 51 6e-06
UniRef100_Q6LR45 Hypothetical protein [Photobacterium profundum)] 51 8e-06
UniRef100_UPI000032F12C UPI000032F12C UniRef100 entry 50 1e-05
UniRef100_Q9KR16 Sensor histidine kinase [Vibrio cholerae] 50 1e-05
UniRef100_UPI0000342171 UPI0000342171 UniRef100 entry 50 1e-05
UniRef100_Q87PF5 Sensor histidine kinase/response regulator [Vib... 50 1e-05
UniRef100_Q9A472 Sensory box histidine kinase/response regulator... 49 4e-05
UniRef100_Q9RLC7 Putative histidine kinase [Pseudomonas stutzeri] 49 4e-05
UniRef100_Q87LP4 Sensor histidine kinase/response regulator [Vib... 48 5e-05
UniRef100_UPI000042BE83 UPI000042BE83 UniRef100 entry 48 7e-05
UniRef100_Q7MKW0 Signal transduction histidine kinase [Vibrio vu... 48 7e-05
UniRef100_Q8KQV0 Putative histidine kinase [Vibrio cholerae] 48 7e-05
UniRef100_Q6KFY0 Transcription factor Skn7 [Candida albicans] 48 7e-05
>UniRef100_UPI0000234F72 UPI0000234F72 UniRef100 entry
Length = 676
Score = 58.2 bits (139), Expect = 5e-08
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 11 GVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPG----QIVG 66
G E NG+E+L L + KFD ILM + MPVMDG TAT+++R +E I+G
Sbjct: 577 GFEVTTANNGQEALGLWDS--DKFDCILMDQEMPVMDGNTATREIRAMEKEKGSHIPILG 634
Query: 67 VSRHLTNDEYAEFCNAGLDDLHHE 90
V+ ++ D+ A+ NAG+D + H+
Sbjct: 635 VTANVRQDQQADMLNAGMDGIIHK 658
>UniRef100_Q6WJ26 Histidine kinase G2 [Emericella nidulans]
Length = 659
Score = 58.2 bits (139), Expect = 5e-08
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 11 GVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPG----QIVG 66
G E NG+E+L L + KFD ILM + MPVMDG TAT+++R +E I+G
Sbjct: 560 GFEVTTANNGQEALGLWDS--DKFDCILMDQEMPVMDGNTATREIRAMEKEKGSHIPILG 617
Query: 67 VSRHLTNDEYAEFCNAGLDDLHHE 90
V+ ++ D+ A+ NAG+D + H+
Sbjct: 618 VTANVRQDQQADMLNAGMDGIIHK 641
>UniRef100_Q9M8Y4 Two-component response regulator ARR22 [Arabidopsis thaliana]
Length = 142
Score = 55.1 bits (131), Expect = 4e-07
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 10 IGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPGQIVGVSR 69
IG + KNG+E++ L E FDLILM + MP DG++ TKKLR+++ IVGV+
Sbjct: 44 IGGISQTAKNGEEAVILHRDGEASFDLILMDKEMPERDGVSTTKKLREMKVTSMIVGVTS 103
Query: 70 HLTNDEYAE-FCNAGLD 85
+E + F AGL+
Sbjct: 104 VADQEEERKAFMEAGLN 120
>UniRef100_Q6MQ95 Two component sensor histidine kinase [Bdellovibrio bacteriovorus]
Length = 666
Score = 54.7 bits (130), Expect = 5e-07
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
+++ L G NG+E L +E++FD+ILM MPVMDG TAT+KLR Y
Sbjct: 560 LLIQRMLAKRGANLTLATNGQEGLT--KALEKEFDIILMDIQMPVMDGYTATRKLRQAGY 617
Query: 61 PGQIVGVSRHLTNDEYAEFCNAGLDD 86
I+ ++ H D+ AG D
Sbjct: 618 SKPIIALTAHAMKDDRERCLEAGCTD 643
>UniRef100_O82445 Response regulator protein [Brassica napus]
Length = 136
Score = 53.9 bits (128), Expect = 9e-07
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MILFEWLID-IGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLE 59
+I+ E +I IG + NG+E++ + FDLILM + MP DG++ TKKLR++E
Sbjct: 28 LIIHEKIIKAIGGISQTANNGEEAVIIHRDGGSSFDLILMDKEMPERDGVSTTKKLREME 87
Query: 60 YPGQIVGVSRHLTNDEYAE-FCNAGLD 85
IVGV+ N+E F AGL+
Sbjct: 88 VKSMIVGVTSLADNEEERRAFMEAGLN 114
>UniRef100_Q6LLE9 Putative BaeS, Signal transduction histidine kinase [Photobacterium
profundum)]
Length = 971
Score = 53.1 bits (126), Expect = 2e-06
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDL 58
+I+ +L G THAV+NG E+L ++ V FD+ILM MPVMDGI ATK++R L
Sbjct: 668 LIIESFLKQYGFNTHAVENGAEALKILEHVY--FDVILMDNHMPVMDGIEATKRIRAL 723
>UniRef100_Q9KS16 Sensor histidine kinase/response regulator [Vibrio cholerae]
Length = 572
Score = 52.0 bits (123), Expect = 3e-06
Identities = 28/87 (32%), Positives = 48/87 (54%), Gaps = 1/87 (1%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
M++ L +G + +NG ++++L+ FDL+LM MP+MDGI ATK LRD
Sbjct: 467 MVIQLLLNKLGYDVTIAENGLQAVELLEK-NHVFDLVLMDISMPIMDGIAATKILRDKHI 525
Query: 61 PGQIVGVSRHLTNDEYAEFCNAGLDDL 87
I+ ++ H + +AG++D+
Sbjct: 526 EIPIIALTAHTAGSDKQNCIDAGMNDI 552
>UniRef100_Q74AN8 Sensory box histidine kinase/response regulator [Geobacter
sulfurreducens]
Length = 982
Score = 51.2 bits (121), Expect = 6e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 10 IGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPG-----QI 64
+G+ A NG E+LDL++T +DL+LM MPVMDG AT+ +RD+ P +
Sbjct: 747 LGLRGDAAANGAEALDLLATTP--YDLVLMDVQMPVMDGFEATRHIRDVRSPVLNHEIPV 804
Query: 65 VGVSRHLTNDEYAEFCNAGLDD 86
+ ++ H + + +AG++D
Sbjct: 805 IALTAHAMKGDRRKCLDAGMND 826
>UniRef100_Q6LR45 Hypothetical protein [Photobacterium profundum)]
Length = 693
Score = 50.8 bits (120), Expect = 8e-06
Identities = 25/76 (32%), Positives = 42/76 (54%)
Query: 11 GVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPGQIVGVSRH 70
G NG+E++ + FD++LM MPV+DGI ATK+LR+ E I+ ++ +
Sbjct: 596 GHRVQIANNGEEAIKALENNTHYFDIVLMDISMPVLDGIQATKRLREEEITIPIIALTAN 655
Query: 71 LTNDEYAEFCNAGLDD 86
+ E+ AG++D
Sbjct: 656 AMQCDQVEYKKAGMND 671
>UniRef100_UPI000032F12C UPI000032F12C UniRef100 entry
Length = 884
Score = 50.4 bits (119), Expect = 1e-05
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
++ E L ++G+ ++GK+++ + + +DLILM MPVMDG ATK+LR+ +
Sbjct: 776 LVTGEMLTNLGLTFDIAEDGKQAVQKVENAPQ-YDLILMDVQMPVMDGYEATKQLREKGF 834
Query: 61 PG-QIVGVSRHLTNDEYAEFCNAGLDD 86
G I+G+S + ++ +AG++D
Sbjct: 835 TGVPIIGLSANAMKEDKQSAIDAGMND 861
>UniRef100_Q9KR16 Sensor histidine kinase [Vibrio cholerae]
Length = 736
Score = 50.4 bits (119), Expect = 1e-05
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
MIL ++ + G E H+V +G +++ + E FDL+LM MP+ DGI AT+++R L
Sbjct: 615 MILEAFMRNKGFECHSVMDGVQAITALQ--ESSFDLVLMDNHMPLKDGIQATREIRQLPL 672
Query: 61 PGQ---IVGVSRHLTNDEYAEFCNAGLDDL 87
P + G + + D + +AG DD+
Sbjct: 673 PQAKILLFGCTADVFKDTRDKMLSAGADDI 702
>UniRef100_UPI0000342171 UPI0000342171 UniRef100 entry
Length = 160
Score = 50.1 bits (118), Expect = 1e-05
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
++ E L ++G+ ++GK+++ + + +DLILM MPVMDG ATK+LR+ +
Sbjct: 52 LVTGEMLTNLGLTFDIAEDGKQAVQKLENAPQ-YDLILMDVQMPVMDGYEATKQLREKGF 110
Query: 61 PG-QIVGVSRHLTNDEYAEFCNAGLDD 86
G I+G+S + ++ +AG++D
Sbjct: 111 TGVPIIGLSANAMKEDKQSAIDAGMND 137
>UniRef100_Q87PF5 Sensor histidine kinase/response regulator [Vibrio
parahaemolyticus]
Length = 576
Score = 50.1 bits (118), Expect = 1e-05
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 10 IGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEYPGQIVGVSR 69
+G H +G E+L + + + D+ILM MPVMDGITAT+ +R IV ++
Sbjct: 478 LGHNVHIASHGAEALTFLEENDTRIDMILMDVSMPVMDGITATRLIRKKGITIPIVALTA 537
Query: 70 HLTNDEYAEFCNAGLD 85
H + + +AG+D
Sbjct: 538 HALESDKDKCLDAGMD 553
>UniRef100_Q9A472 Sensory box histidine kinase/response regulator [Caulobacter
crescentus]
Length = 713
Score = 48.5 bits (114), Expect = 4e-05
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 11 GVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLE 59
G E +NG E+L +++T ++FDLILM MPVMDG+TAT+++R LE
Sbjct: 610 GAELVMAENGAEALTILAT--QRFDLILMDMQMPVMDGLTATREVRCLE 656
>UniRef100_Q9RLC7 Putative histidine kinase [Pseudomonas stutzeri]
Length = 417
Score = 48.5 bits (114), Expect = 4e-05
Identities = 30/91 (32%), Positives = 50/91 (53%), Gaps = 7/91 (7%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
M+L L D+G E AV +G+++L+++ ++ FD++ M MP MDG T+ +R E
Sbjct: 181 MLLETLLTDMGGEVVAVSSGQQALEVVQ--QQSFDMVFMDVQMPGMDGRQTTEAIRRWEL 238
Query: 61 -----PGQIVGVSRHLTNDEYAEFCNAGLDD 86
P IV ++ H ++E +GLDD
Sbjct: 239 ESGQPPLPIVALTAHALSNERRSLLQSGLDD 269
>UniRef100_Q87LP4 Sensor histidine kinase/response regulator [Vibrio
parahaemolyticus]
Length = 932
Score = 48.1 bits (113), Expect = 5e-05
Identities = 31/87 (35%), Positives = 50/87 (56%), Gaps = 5/87 (5%)
Query: 3 LFEWLIDIGVET-HAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY- 60
L L+ VET A NG+++++L + E+K+DLI M MP+MDG+TA + +++LE
Sbjct: 682 LISALLKERVETVTACSNGQQAVNLAT--EKKYDLIFMDIQMPLMDGVTACQNIKELELN 739
Query: 61 -PGQIVGVSRHLTNDEYAEFCNAGLDD 86
++ V+ H E AG+DD
Sbjct: 740 KDTPVIAVTAHAMAGERDRLLAAGMDD 766
>UniRef100_UPI000042BE83 UPI000042BE83 UniRef100 entry
Length = 559
Score = 47.8 bits (112), Expect = 7e-05
Identities = 26/84 (30%), Positives = 48/84 (56%), Gaps = 4/84 (4%)
Query: 5 EWLIDIGVETHAVKNGKESLDLISTVER-KFDLILMARIMPVMDGITATKKLRDLEYPGQ 63
++L+ G V +G L+ ISTVE K+DL+LM +MP +DG TAT +R +
Sbjct: 441 KFLVKYGCSVTVVTDG---LNAISTVEHTKYDLVLMDIVMPNLDGATATSVIRSFDTKTP 497
Query: 64 IVGVSRHLTNDEYAEFCNAGLDDL 87
I+ ++ ++ +++ + G+ D+
Sbjct: 498 IIAMTGNIEDNDLVTYLQNGMSDI 521
>UniRef100_Q7MKW0 Signal transduction histidine kinase [Vibrio vulnificus]
Length = 569
Score = 47.8 bits (112), Expect = 7e-05
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
M++ L +G NG E+++ I + D++ M MPVMDG+TATK LR +
Sbjct: 464 MVIQLLLNKLGHNVFIANNGSEAIEFIESNTESLDVVFMDVSMPVMDGLTATKILRTKGF 523
Query: 61 PGQIVGVSRHLTNDEYAEFCNAGLD 85
I+ ++ H + + G+D
Sbjct: 524 EVPIIALTAHALASDKQNCLDVGMD 548
>UniRef100_Q8KQV0 Putative histidine kinase [Vibrio cholerae]
Length = 1268
Score = 47.8 bits (112), Expect = 7e-05
Identities = 25/88 (28%), Positives = 46/88 (51%), Gaps = 2/88 (2%)
Query: 1 MILFEWLIDIGVETHAVKNGKESLDLISTVERKFDLILMARIMPVMDGITATKKLRDLEY 60
++ E L +G +G+E+L+++ + FD++LM MP MDG T+++R L
Sbjct: 942 LVASELLQQLGATIKIASSGEEALEMLESTAEHFDMVLMDIQMPGMDGYQTTREIRKLPR 1001
Query: 61 PG--QIVGVSRHLTNDEYAEFCNAGLDD 86
I+ ++ H +D+ A AG+ D
Sbjct: 1002 HQLLPIIAITAHAMSDDIAACLAAGMQD 1029
>UniRef100_Q6KFY0 Transcription factor Skn7 [Candida albicans]
Length = 559
Score = 47.8 bits (112), Expect = 7e-05
Identities = 26/84 (30%), Positives = 48/84 (56%), Gaps = 4/84 (4%)
Query: 5 EWLIDIGVETHAVKNGKESLDLISTVER-KFDLILMARIMPVMDGITATKKLRDLEYPGQ 63
++L+ G V +G L+ ISTVE K+DL+LM +MP +DG TAT +R +
Sbjct: 441 KFLVKYGCSVTVVTDG---LNAISTVEHTKYDLVLMDIVMPNLDGATATSVIRSFDTKTP 497
Query: 64 IVGVSRHLTNDEYAEFCNAGLDDL 87
I+ ++ ++ +++ + G+ D+
Sbjct: 498 IIAMTGNIEDNDLVTYLQNGMSDI 521
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.142 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,366,130
Number of Sequences: 2790947
Number of extensions: 5855762
Number of successful extensions: 15715
Number of sequences better than 10.0: 1206
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 738
Number of HSP's that attempted gapping in prelim test: 15157
Number of HSP's gapped (non-prelim): 1240
length of query: 97
length of database: 848,049,833
effective HSP length: 73
effective length of query: 24
effective length of database: 644,310,702
effective search space: 15463456848
effective search space used: 15463456848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146819.13