Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146818.2 - phase: 0 /pseudo
         (1427 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_UPI000026D23F UPI000026D23F UniRef100 entry                  37  3.4
UniRef100_UPI0000363D11 UPI0000363D11 UniRef100 entry                  37  5.7

>UniRef100_UPI000026D23F UPI000026D23F UniRef100 entry
          Length = 170

 Score = 37.4 bits (85), Expect = 3.4
 Identities = 27/75 (36%), Positives = 44/75 (58%)

Query: 780 VLSL*MSILLK*LFPGM*NFLIWNFLSIPLVLLQFPLHIFTLIVKLLTLCLLMTLL*ILL 839
           +L L + +LL  L P +   L+   L + L+LL  PL +  L++ LL L LL+ LL +LL
Sbjct: 21  LLLLLLLLLLLLLLPLLLLLLLLLLLLLLLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLL 80

Query: 840 KIMMRFLMKIHLLIL 854
            ++   L+ + LL+L
Sbjct: 81  LLLKLLLLLLLLLLL 95


>UniRef100_UPI0000363D11 UPI0000363D11 UniRef100 entry
          Length = 224

 Score = 36.6 bits (83), Expect = 5.7
 Identities = 50/228 (21%), Positives = 106/228 (45%), Gaps = 18/228 (7%)

Query: 799  FLIWNFLSIPLVLLQFPLHIFTLIVKLLTLCLLMTLL*ILLKIMMRFLMKIHLLILKKGM 858
            +L+  FL++ ++ L   +    L+V  + L LLM  L +L+  +   +M ++LL++   +
Sbjct: 6    YLLMMFLNLLVIFLYLLMMFLYLLV--IFLYLLMMFLYVLVIFLYLLMMFLYLLVIFLYL 63

Query: 859  MKWSL*PPENPPEVLNHQFTYKIMSVIQQVVITL*QILLVIQLYLLNTVLMLTL*ILRLS 918
            +   L         L   F Y +M  +  +VI L   LL++ LYLL   L L +  L L 
Sbjct: 64   LMMFL--------NLLVIFLYLLMMFLNLLVIFL--YLLMMFLYLLVIFLYLLMMFLNLL 113

Query: 919  PLVIFQLVKILGG*LLCRQR*RLLMQIILGNLLIFLQMLYP*VVNGYIRSKDMQMVP*NV 978
             + ++ L+  L   ++      + + +++  L + +  LY  V+  Y+    + ++    
Sbjct: 114  VIFLYLLMMFLNLLVIFLYLLMMFLYLLVIFLYLLMMFLYLLVIFLYLLMMFLNLLV--- 170

Query: 979  SKHVWLLKVLIKLKGLIILKHSPLLPSYPPLGYCLLLHLFMVGICINL 1026
               ++L  +++ L  L+I  +  ++  Y    +  LL +F+  + I L
Sbjct: 171  ---IFLYLLMMFLNVLVIFLYLLMMFLYLLRMFLYLLVMFLYLLVIFL 215


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.370    0.167    0.644 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,853,808,573
Number of Sequences: 2790947
Number of extensions: 62861429
Number of successful extensions: 294387
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 294346
Number of HSP's gapped (non-prelim): 18
length of query: 1427
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1287
effective length of database: 457,317,253
effective search space: 588567304611
effective search space used: 588567304611
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 81 (35.8 bits)


Medicago: description of AC146818.2