BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.7 - phase: 0 /pseudo
(97 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q75QW9 Flowering locus T like protein [Populus nigra] 144 4e-34
UniRef100_Q9XH44 CEN-like protein 1 [Nicotiana tabacum] 135 2e-31
UniRef100_Q7XVG4 OSJNBa0073L04.4 protein [Oryza sativa] 127 8e-29
UniRef100_Q69F37 Terminal flower [Citrus sinensis] 126 1e-28
UniRef100_Q84XK7 SP9D [Lycopersicon esculentum] 125 2e-28
UniRef100_Q9FIT4 BROTHER of FT and TFL1 protein [Arabidopsis tha... 122 2e-27
UniRef100_Q9XGS5 Cen-like protein FDR2 [Oryza sativa] 122 2e-27
UniRef100_Q76CA4 Flowering locus T [Populus nigra] 122 2e-27
UniRef100_Q76BW4 Flowering locus T [Populus nigra] 122 2e-27
UniRef100_Q75QX2 Flowering locus T [Populus nigra] 122 2e-27
UniRef100_Q9XGS4 Cen-like protein FDR1 [Oryza sativa] 122 3e-27
UniRef100_Q6ESF8 Putative Cen-like protein [Oryza sativa] 122 3e-27
UniRef100_Q9FUA6 Terminal flower 1-like protein [Lolium perenne] 121 4e-27
UniRef100_Q8LSG7 Terminal flower 1 [Arabidopsis lyrata] 120 1e-26
UniRef100_Q8LSH0 Terminal flower 1 [Arabidopsis thaliana] 119 1e-26
UniRef100_Q8LSG9 Terminal flower 1 [Arabidopsis thaliana] 119 1e-26
UniRef100_Q6L5U5 Flowering locus T like protein [Populus nigra] 119 2e-26
UniRef100_Q8LSG8 Terminal flower 1 [Arabidopsis thaliana] 119 2e-26
UniRef100_P93003 TERMINAL FLOWER 1 protein [Arabidopsis thaliana] 119 2e-26
UniRef100_Q6L5U7 Terminal flower 1 [Populus nigra] 118 3e-26
>UniRef100_Q75QW9 Flowering locus T like protein [Populus nigra]
Length = 173
Score = 144 bits (364), Expect = 4e-34
Identities = 69/87 (79%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
MSR +EPL+VGRV+G+VVDIF PSVRM VTY S KQVANG+E MPS++ KPRV+IGGED
Sbjct: 1 MSRAMEPLTVGRVVGDVVDIFTPSVRMTVTYNSNKQVANGYEFMPSVIAYKPRVEIGGED 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
MR+AYTLIMTDPDAPSPSDP+LREHLH
Sbjct: 61 MRTAYTLIMTDPDAPSPSDPYLREHLH 87
>UniRef100_Q9XH44 CEN-like protein 1 [Nicotiana tabacum]
Length = 174
Score = 135 bits (340), Expect = 2e-31
Identities = 65/86 (75%), Positives = 75/86 (86%), Gaps = 1/86 (1%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYS-TKQVANGHELMPSIVMNKPRVDIGGEDM 60
SR +EPL V RVIGEVVD FNPSV++NV Y+ +KQV NGHELMP+++ KPRV+IGGEDM
Sbjct: 3 SRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDM 62
Query: 61 RSAYTLIMTDPDAPSPSDPHLREHLH 86
RSAYTLIMTDPD P PSDP+LREHLH
Sbjct: 63 RSAYTLIMTDPDVPGPSDPYLREHLH 88
>UniRef100_Q7XVG4 OSJNBa0073L04.4 protein [Oryza sativa]
Length = 173
Score = 127 bits (318), Expect = 8e-29
Identities = 60/87 (68%), Positives = 73/87 (82%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYST-KQVANGHELMPSIVMNKPRVDIGGED 59
MSR LEPL VG+VIGEV+D FNP+V+M TYS+ KQV NGHEL PS V++KPRV++ G D
Sbjct: 1 MSRVLEPLVVGKVIGEVIDNFNPTVKMTATYSSNKQVFNGHELFPSAVVSKPRVEVQGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
+RS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q69F37 Terminal flower [Citrus sinensis]
Length = 173
Score = 126 bits (317), Expect = 1e-28
Identities = 57/85 (67%), Positives = 71/85 (83%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R LEPL+VG VIG+V++ F PS++M+VTY KQV NGHEL PS V++KPRV+I G DMR
Sbjct: 3 ARMLEPLAVGGVIGDVIESFTPSIKMSVTYDNKQVCNGHELFPSTVVSKPRVEIQGGDMR 62
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+MTDPD P PSDP+LREHLH
Sbjct: 63 SFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q84XK7 SP9D [Lycopersicon esculentum]
Length = 172
Score = 125 bits (314), Expect = 2e-28
Identities = 52/86 (60%), Positives = 73/86 (84%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDM 60
M+R LEPL VGRVIG+V+D FNP+++M++TY+ K V NGHEL PS+V ++P+V++ G D+
Sbjct: 1 MARSLEPLIVGRVIGDVIDSFNPTIKMSITYNNKLVCNGHELFPSVVSSRPKVEVQGGDL 60
Query: 61 RSAYTLIMTDPDAPSPSDPHLREHLH 86
R+ +TL+MTDPD P PSDP++REHLH
Sbjct: 61 RTFFTLVMTDPDVPGPSDPYMREHLH 86
>UniRef100_Q9FIT4 BROTHER of FT and TFL1 protein [Arabidopsis thaliana]
Length = 177
Score = 122 bits (307), Expect = 2e-27
Identities = 56/87 (64%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQ-VANGHELMPSIVMNKPRVDIGGED 59
MSR +EPL VGRVIG+V+++FNPSV M VT+++ V+NGHEL PS++++KPRV+IGG+D
Sbjct: 1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
+RS +TLIM DPDAPSPS+P++RE+LH
Sbjct: 61 LRSFFTLIMMDPDAPSPSNPYMREYLH 87
>UniRef100_Q9XGS5 Cen-like protein FDR2 [Oryza sativa]
Length = 173
Score = 122 bits (306), Expect = 2e-27
Identities = 59/87 (67%), Positives = 71/87 (80%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
MSR +EPL VGRVIGEV+D FNP ++M VTY S K V NGHEL PS V++KPRV++ G D
Sbjct: 1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
+RS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q76CA4 Flowering locus T [Populus nigra]
Length = 174
Score = 122 bits (306), Expect = 2e-27
Identities = 58/86 (67%), Positives = 71/86 (82%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDM 60
MSR +PLSVGRVIG+V+D F S+ + VTYS+++V NG EL PS V N+PRVDIGGED+
Sbjct: 1 MSRDRDPLSVGRVIGDVLDPFTKSISLRVTYSSREVNNGCELKPSQVANQPRVDIGGEDL 60
Query: 61 RSAYTLIMTDPDAPSPSDPHLREHLH 86
R+ YTL+M DPDAPSPSDP LRE+LH
Sbjct: 61 RTFYTLVMVDPDAPSPSDPSLREYLH 86
>UniRef100_Q76BW4 Flowering locus T [Populus nigra]
Length = 174
Score = 122 bits (306), Expect = 2e-27
Identities = 58/86 (67%), Positives = 71/86 (82%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDM 60
MSR +PLSVGRVIG+V+D F S+ + VTYS+++V NG EL PS V N+PRVDIGGED+
Sbjct: 1 MSRDRDPLSVGRVIGDVLDPFTKSISLRVTYSSREVNNGCELKPSQVANQPRVDIGGEDL 60
Query: 61 RSAYTLIMTDPDAPSPSDPHLREHLH 86
R+ YTL+M DPDAPSPSDP LRE+LH
Sbjct: 61 RTFYTLVMVDPDAPSPSDPSLREYLH 86
>UniRef100_Q75QX2 Flowering locus T [Populus nigra]
Length = 173
Score = 122 bits (306), Expect = 2e-27
Identities = 58/86 (67%), Positives = 71/86 (82%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDM 60
MSR +PLSVGRVIG+V+D F S+ + VTYS+++V NG EL PS V N+PRVDIGGED+
Sbjct: 1 MSRDRDPLSVGRVIGDVLDPFTKSISLRVTYSSREVNNGCELKPSQVANQPRVDIGGEDL 60
Query: 61 RSAYTLIMTDPDAPSPSDPHLREHLH 86
R+ YTL+M DPDAPSPSDP LRE+LH
Sbjct: 61 RTFYTLVMVDPDAPSPSDPSLREYLH 86
>UniRef100_Q9XGS4 Cen-like protein FDR1 [Oryza sativa]
Length = 173
Score = 122 bits (305), Expect = 3e-27
Identities = 59/87 (67%), Positives = 69/87 (78%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
MSR +EPL VGRVIGEV+D FNP +M VTY S K V NGHE PS V++KPRV++ G D
Sbjct: 1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
MRS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 MRSFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q6ESF8 Putative Cen-like protein [Oryza sativa]
Length = 173
Score = 122 bits (305), Expect = 3e-27
Identities = 58/87 (66%), Positives = 69/87 (78%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
MSR LEPL VG+VIGEV+D FNP+V+M TY + KQV NGHE PS V KPRV++ G D
Sbjct: 1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
+RS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q9FUA6 Terminal flower 1-like protein [Lolium perenne]
Length = 173
Score = 121 bits (304), Expect = 4e-27
Identities = 59/87 (67%), Positives = 70/87 (79%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
MSR +EPL VGRVIGEV+D FNP V+M TY S K V NGHEL PS V++KPRV++ G D
Sbjct: 1 MSRSVEPLIVGRVIGEVLDPFNPCVKMVATYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
+RS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 LRSLFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q8LSG7 Terminal flower 1 [Arabidopsis lyrata]
Length = 177
Score = 120 bits (300), Expect = 1e-26
Identities = 52/85 (61%), Positives = 70/85 (82%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R +EPL +GRV+G+V+D F P+++MNV+Y+ KQV+NGHEL PS V +KPRV+I G D+R
Sbjct: 6 TRVIEPLIMGRVVGDVLDFFTPTIKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 65
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+M DPD P PSDP L+EHLH
Sbjct: 66 SFFTLVMIDPDVPGPSDPFLKEHLH 90
>UniRef100_Q8LSH0 Terminal flower 1 [Arabidopsis thaliana]
Length = 177
Score = 119 bits (299), Expect = 1e-26
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R +EPL +GRV+G+V+D F P+ +MNV+Y+ KQV+NGHEL PS V +KPRV+I G D+R
Sbjct: 6 TRVIEPLIIGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 65
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+M DPD P PSDP L+EHLH
Sbjct: 66 SFFTLVMIDPDVPGPSDPFLKEHLH 90
>UniRef100_Q8LSG9 Terminal flower 1 [Arabidopsis thaliana]
Length = 177
Score = 119 bits (299), Expect = 1e-26
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R +EPL +GRV+G+V+D F P+ +MNV+Y+ KQV+NGHEL PS V +KPRV+I G D+R
Sbjct: 6 TRVIEPLIIGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 65
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+M DPD P PSDP L+EHLH
Sbjct: 66 SFFTLVMIDPDVPGPSDPFLKEHLH 90
>UniRef100_Q6L5U5 Flowering locus T like protein [Populus nigra]
Length = 173
Score = 119 bits (297), Expect = 2e-26
Identities = 56/87 (64%), Positives = 69/87 (78%), Gaps = 1/87 (1%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59
M+ +PL VGRVIG+V+D F P+V+M VTY S KQV NGHEL PS V +KP+V++ G D
Sbjct: 1 MANLSDPLVVGRVIGDVIDYFTPNVKMTVTYNSNKQVYNGHELFPSAVTHKPKVEVHGGD 60
Query: 60 MRSAYTLIMTDPDAPSPSDPHLREHLH 86
MRS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 MRSFFTLVMTDPDVPGPSDPYLREHLH 87
>UniRef100_Q8LSG8 Terminal flower 1 [Arabidopsis thaliana]
Length = 177
Score = 119 bits (297), Expect = 2e-26
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R +EPL +GRV+G+V+D F P+ +MNV+Y+ KQV+NGHEL PS V +KPRV+I G D+R
Sbjct: 6 TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 65
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+M DPD P PSDP L+EHLH
Sbjct: 66 SFFTLVMIDPDVPGPSDPFLKEHLH 90
>UniRef100_P93003 TERMINAL FLOWER 1 protein [Arabidopsis thaliana]
Length = 177
Score = 119 bits (297), Expect = 2e-26
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 2 SRPLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGEDMR 61
+R +EPL +GRV+G+V+D F P+ +MNV+Y+ KQV+NGHEL PS V +KPRV+I G D+R
Sbjct: 6 TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 65
Query: 62 SAYTLIMTDPDAPSPSDPHLREHLH 86
S +TL+M DPD P PSDP L+EHLH
Sbjct: 66 SFFTLVMIDPDVPGPSDPFLKEHLH 90
>UniRef100_Q6L5U7 Terminal flower 1 [Populus nigra]
Length = 174
Score = 118 bits (296), Expect = 3e-26
Identities = 57/88 (64%), Positives = 69/88 (77%), Gaps = 2/88 (2%)
Query: 1 MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY--STKQVANGHELMPSIVMNKPRVDIGGE 58
M++ EPL VGRVIG+V+D F +V+M VTY S KQV NGHEL PS V NKP+V++ G
Sbjct: 1 MAKMSEPLVVGRVIGDVIDHFTANVKMTVTYQSSRKQVFNGHELFPSAVTNKPKVEVHGG 60
Query: 59 DMRSAYTLIMTDPDAPSPSDPHLREHLH 86
DMRS +TL+MTDPD P PSDP+LREHLH
Sbjct: 61 DMRSFFTLVMTDPDVPGPSDPYLREHLH 88
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.326 0.141 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,011,339
Number of Sequences: 2790947
Number of extensions: 6170920
Number of successful extensions: 17673
Number of sequences better than 10.0: 147
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 17504
Number of HSP's gapped (non-prelim): 150
length of query: 97
length of database: 848,049,833
effective HSP length: 73
effective length of query: 24
effective length of database: 644,310,702
effective search space: 15463456848
effective search space used: 15463456848
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146807.7