BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.4 + phase: 0
(919 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum] 1436 0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum] 751 0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ... 736 0.0
UniRef100_Q93Y69 Putative gag-pol [Oryza sativa] 601 e-170
UniRef100_Q6L974 GAG-POL [Vitis vinifera] 599 e-169
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa... 590 e-167
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana] 576 e-162
UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa] 540 e-152
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa] 539 e-151
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa] 539 e-151
UniRef100_Q9SSW6 GAG-POL [Oryza sativa] 538 e-151
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa] 537 e-151
UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa] 537 e-151
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa] 535 e-150
UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa] 535 e-150
UniRef100_Q60DY3 Putative polyprotein [Oryza sativa] 535 e-150
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa] 535 e-150
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa] 535 e-150
UniRef100_Q75M60 Putative polyprotein [Oryza sativa] 535 e-150
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa] 535 e-150
>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 1436 bits (3716), Expect = 0.0
Identities = 666/920 (72%), Positives = 802/920 (86%), Gaps = 8/920 (0%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS EE+H+ L K+F+RLRK+K
Sbjct: 1350 MPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEEHLVNLQKLFDRLRKFK 1409
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
LRLNP+KCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EMP P+TEKQVRGFLGRLNYI+
Sbjct: 1410 LRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPKTEKQVRGFLGRLNYIA 1469
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RFISH+TATC PIFKLLRKNQ I WND+CQ+AFD IK YL +PPIL+PPV GRPLIMY +
Sbjct: 1470 RFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPPILIPPVPGRPLIMYLS 1529
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
V + SMGCVLG+ DE+G+KEHAIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++N
Sbjct: 1530 VTENSMGCVLGRHDESGRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLN 1589
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
HTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + +QKAIKGSIL+D+LA QP++
Sbjct: 1590 HTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIE 1649
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQ 360
DYQP+ F+FPDE+IMY+K KDC+EPL+ EGPDP+ KW L+FDGAVN G G+GAV+++P+
Sbjct: 1650 DYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPK 1709
Query: 361 GHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHH 420
G H+PF+AR+ F+ TNN AEYEACI GIEEAID+RIK LDI+GDSALV+NQ+ G+W T+
Sbjct: 1710 GAHMPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQ 1769
Query: 421 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLE 480
LIPYRDY RR+LT+F KV+L+H+PRDENQMADALATLSSM +VN WN VP + V RLE
Sbjct: 1770 PHLIPYRDYTRRILTFFKKVKLYHVPRDENQMADALATLSSMIKVNWWNHVPHVAVNRLE 1829
Query: 481 RPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASRFLLD 540
RP++VFA V V+D KPWY+DIK FL ++EYP GAS DKKTLRRLA F L+
Sbjct: 1830 RPAYVFAAESV-------VIDEKPWYYDIKNFLKTQEYPEGASKNDKKTLRRLAGSFYLN 1882
Query: 541 -GDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYYWMTMEH 599
D+LYKRN+DMVLLRC+D EA+ LM +VHEG+FGTHA GH M++KLLRAGYYWMTME
Sbjct: 1883 QDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMES 1942
Query: 600 DCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVA 659
DC+++ARKCHKCQIYAD++HVPP LNV++SPWPF+MWGIDMIG+IEP ASNGHRFILVA
Sbjct: 1943 DCFKYARKCHKCQIYADRVHVPPSPLNVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVA 2002
Query: 660 IDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFK 719
IDYFTKWVEAASY N+TKQVV +FI+ IICRYGVP +IITDNG+NLNN +++ LC++FK
Sbjct: 2003 IDYFTKWVEAASYANITKQVVTRFIKKEIICRYGVPERIITDNGSNLNNKMMKELCKDFK 2062
Query: 720 IEHHNSSPYRPQMNGVVEAANKNIKRIVQKMVTTYRDWHEMLPYALHGYRTTVRSSTGAT 779
IEHHNSSPYRP+MNG VEAANKNIK+IV+KMV TY+DWHEMLP+ALHGYRT+VR+STGAT
Sbjct: 2063 IEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVVTYKDWHEMLPFALHGYRTSVRTSTGAT 2122
Query: 780 PFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQ 839
P+S VYGMEAVLP+EVEIPSLRV+++ KL EAEW ++R+++L+LIEE+R+ + GQ YQ
Sbjct: 2123 PYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAEWIRTRFNELSLIEERRLAVVCHGQLYQ 2182
Query: 840 ARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTH 899
RMK AFD+KV PR ++ G+LVLKR + D RGKWTPNYEGPYVVKK FSGGAL+LT
Sbjct: 2183 RRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDNRGKWTPNYEGPYVVKKVFSGGALMLTT 2242
Query: 900 MDGVELPNPVNADIVKKYFA 919
MDG + P+PVN+D+VKKYFA
Sbjct: 2243 MDGEDFPSPVNSDVVKKYFA 2262
>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 751 bits (1940), Expect = 0.0
Identities = 349/462 (75%), Positives = 412/462 (88%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS EE+H+ L K+F+RLRK+K
Sbjct: 1352 MPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEEHLVNLQKLFDRLRKFK 1411
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
LRLNP+KCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EMP P+TEKQVRGFLGRLNYI+
Sbjct: 1412 LRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPKTEKQVRGFLGRLNYIA 1471
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RFISH+TATC PIFKLLRKNQ I WND+CQ+AFD IK YL +PPIL PPV GRPLIMY +
Sbjct: 1472 RFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPPILTPPVPGRPLIMYLS 1531
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
V + SMGCVLGQ DE+G+KEHAIYYLSKKFTDCETRY++LEKTCCALAWAA+RLR Y++N
Sbjct: 1532 VTENSMGCVLGQHDESGRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLN 1591
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
HTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + +QKAIKGSIL+D+LA QP++
Sbjct: 1592 HTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIE 1651
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQ 360
DYQP+ F+FPDE+IMY+K KDCEEPL+ EGPDP+ KW L+FDGAVN G G+GAV+++P+
Sbjct: 1652 DYQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPK 1711
Query: 361 GHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHH 420
G HIPF+AR+ F+ TNN AEYEACI GIEEAID+RIK LDIYGDSALV+NQ+ G+W T+
Sbjct: 1712 GAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQ 1771
Query: 421 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSM 462
LIPYRDY RR+LT+F KV L+H+PRDENQMADALATLSSM
Sbjct: 1772 PHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATLSSM 1813
>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0433F09 [Oryza sativa]
Length = 2876
Score = 736 bits (1900), Expect = 0.0
Identities = 393/932 (42%), Positives = 557/932 (59%), Gaps = 31/932 (3%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR M + D+IH VE YVDDM+VK+ D E H E L +FERLR+++
Sbjct: 1961 MPFGLKNAGATYQRAMQFVLDDLIHHSVECYVDDMVVKTKDHEHHQEDLRIVFERLRRHQ 2020
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
L++NP KC F V+SG LGF++ +GIE++P K++AI MP PQ K +R G+L YI
Sbjct: 2021 LKMNPLKCAFAVQSGVFLGFVIRHRGIEIEPKKIKAILNMPPPQELKDLRKLQGKLAYIR 2080
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RFIS+++ P KL++K P VW++ECQ FDSIK YLL PP+L PV+GRPLI+Y A
Sbjct: 2081 RFISNLSGRIQPFSKLMKKGTPFVWDEECQNGFDSIKRYLLNPPVLAAPVKGRPLILYIA 2140
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
S+G +L Q ++ G KE A YYLS+ E Y+ +EK C AL +A K+LRHY++
Sbjct: 2141 TQPASIGALLAQHNDEG-KEVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLA 2199
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
H LI+R DPI+Y+ + +TG++ +W +L+ EYDI F QKAIKG LA+ LA P+
Sbjct: 2200 HQIQLIARADPIRYVLSQPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMP 2259
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGA----VNAYG-----KG 351
D P+ + PDEEI + ++ +W L FDGA +N G G
Sbjct: 2260 DDSPLIANLPDEEIFTAELQE--------------QWELYFDGASRKDINPDGTPRRRAG 2305
Query: 352 IGAVIVSPQGHHIPFTARIL-FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVIN 410
G V +PQG I + +L EC+NN AEYEA IFG+ A+ M ++ L +GDS L+I
Sbjct: 2306 AGLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIR 2365
Query: 411 QIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWND 470
QI +E +L+PY ARRL+ F +E+ H+PR +N ADALA L++ N
Sbjct: 2366 QINNIYEVRKPELVPYYTVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNP 2425
Query: 471 VPIIKVQRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTL 530
I+ +R P+ + I + ++ N + + W + P +++ L
Sbjct: 2426 AQIVVEERWLLPAVLELIPEEVNIIITNSAEEEDWRQPFLDYFKHGSLP--EDPVERRQL 2483
Query: 531 RRLASRFLLDGDILYKRNYDM-VLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLR 589
+R ++ +LYKR+Y VLLRCVD EA +++ +VH G G H +G M +
Sbjct: 2484 QRRLPSYIYKAGVLYKRSYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRL 2543
Query: 590 AGYYWMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKA 649
GYYW + DC + A+ CH CQI+ + H PP L+ WPF WGID+IG I P +
Sbjct: 2544 VGYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPS 2603
Query: 650 SNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNN 709
S GHRFIL A DYF+KW EA V V F+ +II R+GVP +I +DN +
Sbjct: 2604 SRGHRFILTATDYFSKWAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQ 2663
Query: 710 VVQALCEEFKIEHHNSSPYRPQMNGVVEAANKNIKRIVQKMVTTY-RDWHEMLPYALHGY 768
+ E++KI+ + S+ Y PQ NG+ EA NK + +I++K V + RDWH+ L AL Y
Sbjct: 2664 KIYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAY 2723
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
R TVR+ T ATP+S VYG EAVLPLE+++PSLRV + +L++ E + R+ +L+ +EE+R
Sbjct: 2724 RVTVRTPTQATPYSLVYGNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEER 2783
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGE--LVLKRRISQQPDPRGKWTPNYEGPYVV 886
+ A+ + Y+ M A+DK V R F+ GE LVL+R I +GK+ P +EGPYV+
Sbjct: 2784 LGALQNLELYRQNMVRAYDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVI 2843
Query: 887 KKAFSGGALILTHMDGVELPNPVNADIVKKYF 918
++A+ GGA L G + P+N +KKYF
Sbjct: 2844 EQAYDGGAYQLIDHQGSQPMPPINGRFLKKYF 2875
>UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]
Length = 1262
Score = 601 bits (1550), Expect = e-170
Identities = 322/824 (39%), Positives = 480/824 (58%), Gaps = 31/824 (3%)
Query: 41 DEEQHVEYLTKMFERLRKYKLRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREM 100
+ ++H E L +FERLRK++ ++NP KC F V+SG LGF+V +GIE++P K++AI M
Sbjct: 455 ERKRHQEDLRVVFERLRKHQHKMNPLKCAFAVQSGIFLGFVVRYRGIEIEPKKIKAIVNM 514
Query: 101 PAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYL 160
P P+ K ++ G+L YI RFIS+++ P KL++K P W+ ECQ FDSIK YL
Sbjct: 515 PPPKNLKDLKTLQGKLAYIRRFISNISGRIQPFAKLMKKGAPFEWDAECQSGFDSIKRYL 574
Query: 161 LEPPILVPPVEGRPLIMYFAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTML 220
L PIL PV+GRPLI+Y A S+G +L Q ++ GK E A YYLS+ E Y+ +
Sbjct: 575 LNLPILAAPVKGRPLILYIATQPVSVGALLAQHNDEGK-EVACYYLSRTMVGAERNYSPI 633
Query: 221 EKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFK 280
EK C AL +A K+LRHY++ H LI+ +DPI+Y+ + + G++ +W +L+ E+DI +
Sbjct: 634 EKLCLALIFALKKLRHYMLTHQIQLIATVDPIRYVLSQPLLAGRLGKWALLMMEFDITYV 693
Query: 281 TQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLV 340
QKA+KG LA+ LA P+ D P+ + PDE++ +++ EP W L
Sbjct: 694 PQKAVKGQALAEFLAAHPVPDDSPLITELPDEDVFTIET----EP----------SWELC 739
Query: 341 FDGAVNAYGK---------GIGAVIVSPQGHHIPFTARILFE-CTNNMAEYEACIFGIEE 390
FDGA G G V +PQG I + +L E C+NN AEYEA IFG+
Sbjct: 740 FDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLLL 799
Query: 391 AIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDEN 450
A+ M ++ + +YGDS L++ QI +E +L+PY ARRL+ F +E+ H+PR N
Sbjct: 800 ALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPYYSAARRLMEMFGHIEVMHVPRSRN 859
Query: 451 QMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDV--IDQAGENVVDNKPWYHD 508
ADALA L++ + + +R P+ + + + +D W
Sbjct: 860 APADALAKLAAALVLPQGGPTQVNVEERWLLPAVLELLPNEYEVDTVMAAAAKEDDWRVP 919
Query: 509 IKQFLLSREYPPGASNKDKKTLRRLASRFLLDGDILYKRNYDM-VLLRCVDEHEAEQLMH 567
+ P ++ +++ L+R ++ + Y+R+Y VLLRCVD EA++ +
Sbjct: 920 FLNYFRHGSLPD--NSVERRQLQRRLPSYVYKSGVSYRRSYGQEVLLRCVDRLEADKALQ 977
Query: 568 DVHEGTFGTHATGHTMSRKLLRAGYYWMTMEHDCYQHARKCHKCQIYADKIHVPPHALNV 627
+VH G G H +G M + AGYYW + DC + A+ CH CQI+ D H+PP L+
Sbjct: 978 EVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLKVAKSCHGCQIHGDFKHLPPVPLHP 1037
Query: 628 ISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNN 687
WPF WGID+IG I+P +S GHRFI DYF+KW EA S V V F+ +
Sbjct: 1038 TVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAITDYFSKWAEAVSLREVKTDNVISFLERH 1097
Query: 688 IICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGVVEAANKNIKRIV 747
II R+GVP +I +DNG ++ +Q ++KI + S+ Y PQ NG++EA NK + +I+
Sbjct: 1098 IIYRFGVPHRISSDNGKAFKSHKMQRFIAKYKIRWNYSTGYYPQANGMIEAFNKTLGKIL 1157
Query: 748 QKMVTTY-RDWHEMLPYALHGYRTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEA 806
+K+V + RDWH+ L AL YR TVR+ T TP+S VYG EAVLPLEVE+PSLRV +
Sbjct: 1158 KKVVNRHRRDWHDHLFEALWAYRVTVRTPTQCTPYSLVYGSEAVLPLEVEVPSLRVAIHE 1217
Query: 807 KLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 850
++++ E + R+ +L+ +EE R+ A+ + Y+ M A++K V
Sbjct: 1218 EITQDEQVRLRFQELDTLEEGRLQAVQNLELYRQNMVRAYNKLV 1261
>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
Length = 1027
Score = 599 bits (1544), Expect = e-169
Identities = 339/920 (36%), Positives = 511/920 (54%), Gaps = 39/920 (4%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR MT +F +I VEVY+DD++VKS EQH+ +L ++F LR+Y
Sbjct: 144 MPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVVKSKTREQHILHLQEVFYLLRRYG 203
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP KC FGV + K LGF+VSQ+GIEV PD+V+A+ E P P+ +K+++ G+L +
Sbjct: 204 MKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAVMETPPPRNKKELQRLTGKLVALG 263
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RFI+ P F +RK W D CQ A + IK+YL++PPIL P+ L MY A
Sbjct: 264 RFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIKHYLMQPPILSSPIPKEKLYMYLA 323
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
V + ++ VL + + K++ IYY+S+ D ETRY+ +E AL AA++LR Y
Sbjct: 324 VSEWAISAVL-FRCPSPKEQKPIYYVSRALADVETRYSKMELISLALRSAAQKLRPYFQA 382
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
H ++ P++ I K +TG++ +W + LSE+ I F+ + ++KG ++AD +
Sbjct: 383 HPV-IVLTDQPLRNILHKPDLTGRMLQWAIELSEFGIEFQPRLSMKGQVMADFV------ 435
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQ 360
+E+ +P EG W L DGA + G G+G ++ SP
Sbjct: 436 ----LEYS--------------RKPGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQSPT 477
Query: 361 GHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHH 420
G H+ R+ F +NN AEYEA + G++ A+ + + L I+ DS LV+ ++ E+E
Sbjct: 478 GEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKD 537
Query: 421 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLE 480
A++ Y R L FT+ + I R +N+ ADALA +++ + +P I VQ
Sbjct: 538 ARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALAGIAASLSIKEAILLP-IHVQTNP 596
Query: 481 RPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASRFLLD 540
S + + D++ W +DI +++ + P K +R A+RF L
Sbjct: 597 SVSEI----SICSTTEAPQADDQEWMNDITEYIRTGTLP--GDPKQAHKVRVQAARFTLI 650
Query: 541 GDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYYWMTMEHD 600
G LYKR++ LRC+ EA+ ++ ++HEG +G H+ G +++ + GYYW TM+ +
Sbjct: 651 GGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNHSGGRSLAHRAHSQGYYWPTMKKE 710
Query: 601 CYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAI 660
+ ++C KCQ YA H+P L IS PWPF+ WG+D++ R P A +F+LVA
Sbjct: 711 AAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQWGMDIV-RPLPTAPAQKKFLLVAT 769
Query: 661 DYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKI 720
DYF+KWVEA +Y + + V KF+ NIICR+G+P II DNG ++ + C E I
Sbjct: 770 DYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQTIIADNGPQFDSIAFRNFCSELNI 829
Query: 721 EHHNSSPYRPQMNGVVEAANKNIKRIVQKMVTTYR-DWHEMLPYALHGYRTTVRSSTGAT 779
+ S+P PQ NG EA NK + ++K + + W E LP L YRTT TG T
Sbjct: 830 RNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGNT 889
Query: 780 PFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQ 839
PF+ YGM+AV+P+E+ +P++ AK S+A R L+ +E R A R YQ
Sbjct: 890 PFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLGR--NLDWTDEVRESASIRMADYQ 946
Query: 840 ARMKTAFDKKVHPREFKTGELVLKRRISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILT 898
R +++KV PR K G LVL++ + GK+ N+EGPY+V KA GA L
Sbjct: 947 QRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGKFQANWEGPYIVSKASDNGAYHLQ 1006
Query: 899 HMDGVELPNPVNADIVKKYF 918
+DG L P N +K+Y+
Sbjct: 1007 KLDGTPLLRPWNVSNLKQYY 1026
>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
Length = 1580
Score = 590 bits (1522), Expect = e-167
Identities = 334/921 (36%), Positives = 513/921 (55%), Gaps = 63/921 (6%)
Query: 3 FGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLR 62
F L +AGATYQR M ++HD+I VEVY+DD++VKS + E H+ L K+FER RKY L+
Sbjct: 711 FVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIADLRKVFERTRKYGLK 770
Query: 63 LNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRF 122
+NP KC FGV +G+ LGF+V ++GIEV + AI+++ P+ + +++ +G++N++ RF
Sbjct: 771 MNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKTELQEMIGKINFVRRF 830
Query: 123 ISHMTATCGPIFKLLR--KNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
IS ++ P LLR +Q W E Q+A D+IK YL PP+L+PP +G P +Y +
Sbjct: 831 ISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFRLYLS 890
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
D+S+ VL Q+ E +KE ++YLS++ + ETRY+ +EK C L ++ RLRHYL++
Sbjct: 891 AGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRHYLLS 948
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
+ +I + D +KY+ + G+I +W L+E+D+ +++ KAIKG +A+ +
Sbjct: 949 NECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV----- 1003
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQ 360
D+ D+ I V+ W L FDG+V +G GIG VI+SP+
Sbjct: 1004 -------DYRDDSIGSVEVVP---------------WTLFFDGSVCTHGCGIGLVIISPR 1041
Query: 361 GHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHH 420
G F I TNN AEYEA + G++ ++ ++I GDS LVI+Q+ GE+E +
Sbjct: 1042 GACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEYECKN 1101
Query: 421 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLE 480
LI Y + + L+ F V L H+ R++N A+ LA +S +++ +IK ++E
Sbjct: 1102 DTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKHVQIE 1154
Query: 481 RPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASRFLLD 540
V+ W + + Q+L S + LR A +++L
Sbjct: 1155 VA----------------VITADDWRYYVYQYLQD------PSQSASRKLRYKALKYILL 1192
Query: 541 GDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYYWMTMEHD 600
D LY R D VLL+C+ +A+ + +VHEG GTH + H M L AGY+W TM D
Sbjct: 1193 DDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPTMLED 1252
Query: 601 CYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAI 660
C+++ + C CQ + P A+N I PWPF WGIDMIG I P +S GH+FILVA
Sbjct: 1253 CFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFILVAT 1312
Query: 661 DYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKI 720
DYFTKWVEA V +F++ +II R G+P I TD G+ ++ + I
Sbjct: 1313 DYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFADSMGI 1372
Query: 721 EHHNSSPYRPQMNGVVEAANKNIKRIVQKMVTTY-RDWHEMLPYALHGYRTTVRSSTGAT 779
+ NSSPY Q NG EA+NK++ +++++ ++ Y R WH L AL YR S
Sbjct: 1373 KLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGSIQVP 1432
Query: 780 PFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQ 839
P+ VY +A+LP EV I S R ++ L+ E+ D+ + + R+ A+A+ +
Sbjct: 1433 PYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKVIKDK 1492
Query: 840 ARMKTAFDKKVHPREFKTGELVLK--RRISQQPDPRGKWTPNYEGPYVVKKAFSGGALIL 897
R+ ++KKV P++F GEL+ K I + GKW+PN+EGP+ + K S GA +L
Sbjct: 1493 ERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKGAYML 1552
Query: 898 THMDGVELPNPVNADIVKKYF 918
+DG +N +KKY+
Sbjct: 1553 QGLDGEVYDRALNGKYLKKYY 1573
>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 576 bits (1484), Expect = e-162
Identities = 341/929 (36%), Positives = 508/929 (53%), Gaps = 49/929 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
M FGL NAGATYQR + + D I + VEVY+DDM+VKS E HVE+L+K F+ L Y
Sbjct: 947 MSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYG 1006
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+ ++V+ GR+ ++
Sbjct: 1007 MKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALN 1066
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RFIS T C P + LL++ W+ + +EAF+ +K+YL PPILV P G L +Y A
Sbjct: 1067 RFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIA 1126
Query: 181 VFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVN 240
V D ++ VL ++D ++ I+Y SK + ETRY ++EK A+ +A++LR Y +
Sbjct: 1127 VSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQS 1184
Query: 241 HTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLD 300
HT +++ P++ + +G++ +W + LSEYDI F+ + A+K +LAD L PL
Sbjct: 1185 HTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPL- 1242
Query: 301 DYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQ 360
+ E + G + +W L DG+ +A G GIG +VSP
Sbjct: 1243 -------------------QSAERAVSG---NRGEEWSLYVDGSSSARGSGIGIRLVSPT 1280
Query: 361 GHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHH 420
+ + R+ F TNN+AEYE I G+ A M+I + + DS L+ Q+ GE+E +
Sbjct: 1281 AEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEAKN 1340
Query: 421 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV-PIIKVQRL 479
K+ Y + + F +L IPR +N ADALA L+ + +D+ II V+ +
Sbjct: 1341 EKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLRRIIPVESI 1396
Query: 480 ERPS-----HVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRL- 533
++PS V + + + D W +I+ +L P DK T RRL
Sbjct: 1397 DKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYLSDGTLP-----SDKWTARRLR 1451
Query: 534 --ASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAG 591
A+++ L + L K + +L C+ E ++M + HEG G H+ G ++ KL + G
Sbjct: 1452 IKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRALALKLKKLG 1511
Query: 592 YYWMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASN 651
+YW TM DC KC +CQ +A IH P L +P+PF W +D++G + AS
Sbjct: 1512 FYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVGPM--PASR 1569
Query: 652 GHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVV 711
RFILV DYFTKWVEA SY + V F+ IICR+G+P +IITDNG+ +
Sbjct: 1570 QKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNGSQFISLSF 1629
Query: 712 QALCEEFKIEHHNSSPYRPQMNGVVEAANKNIKRIVQKMVTTYRD-WHEMLPYALHGYRT 770
+ C +KI + S+P PQ NG EA NK I ++K + + W + L L YRT
Sbjct: 1630 ENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELDGVLWSYRT 1689
Query: 771 TVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMD 830
T RS+T TPF+H YGMEA+ P EV SLR M K E + D+L+ +EE R
Sbjct: 1690 TPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEEIRNA 1748
Query: 831 AMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPD-PRGKWTPNYEGPYVVKKA 889
A+ R Q+YQ +++KVH R F G+LVL++ + GK N+EG Y V K
Sbjct: 1749 ALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKI 1808
Query: 890 FSGGALILTHMDGVELPNPVNADIVKKYF 918
G L M G +P N+ +K+Y+
Sbjct: 1809 VRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837
>UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa]
Length = 1991
Score = 540 bits (1391), Expect = e-152
Identities = 323/931 (34%), Positives = 486/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1103 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1162
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1163 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1222
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1223 RFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1282
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1283 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1342
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1343 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1400
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E + + W + FDG+ G G G V+
Sbjct: 1401 ----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVVL 1436
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IKHL + GDS LV+NQ+ EW
Sbjct: 1437 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEW 1496
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 1497 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FV 1552
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1553 EHLYSPTVPHKDATQVAGTHDVAMVEADWRESLIRFLTSQELP-----QDKDEAERISRR 1607
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
++L LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1608 SKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1667
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1668 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1726
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F +I+ R+GVP++IITDNGT V +
Sbjct: 1727 THLFVAIDKFSKWIEAKPVVTITADNARDFF-ISIVHRFGVPNRIITDNGTQFTGGVFKD 1785
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1786 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1845
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1846 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAR 1902
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1903 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1960
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1961 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1991
>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
Length = 2012
Score = 539 bits (1389), Expect = e-151
Identities = 324/931 (34%), Positives = 486/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1124 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1183
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M +P T+K V+ G + +S
Sbjct: 1184 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKSPSTQKDVQKLTGCMAALS 1243
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1244 RFVSRLGERGMPFFKLLKKTDSFRWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1303
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1304 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1363
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1364 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1421
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E + + W + FDG+ G G G V+
Sbjct: 1422 ----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVVL 1457
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1458 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1517
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 1518 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FV 1573
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ A + + W + +FL S+E P +DK R++ R
Sbjct: 1574 EHLYSPTVPHKDATQAAGAHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRR 1628
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
++L LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1629 SKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1688
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1689 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1747
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 1748 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1806
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1807 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1866
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1867 RTTSSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAR 1923
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1924 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1981
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1982 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2012
>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
Length = 2013
Score = 539 bits (1388), Expect = e-151
Identities = 324/931 (34%), Positives = 486/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1125 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1184
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1185 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1244
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1245 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1304
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1305 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1364
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I V G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1365 YFQGHSVTVVTSF-PLGDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1422
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E + + W + FDG+ G G G V+
Sbjct: 1423 ----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVVL 1458
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1459 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1518
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 1519 SYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FV 1574
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1575 EHLYTPTVPHKDTTQVAGTHDAAMVEVDWREPLIRFLTSQELP-----QDKDEAERISRR 1629
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
++L LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1630 SKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1689
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1690 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1748
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 1749 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1807
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1808 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1867
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1868 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1924
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1925 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1982
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1983 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2013
>UniRef100_Q9SSW6 GAG-POL [Oryza sativa]
Length = 1032
Score = 538 bits (1385), Expect = e-151
Identities = 322/931 (34%), Positives = 486/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 144 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 203
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 204 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 263
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 264 RFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 323
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 324 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 383
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 384 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 441
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 442 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 477
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 478 ISPTGERLSYVLWIHFSTSHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 537
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 538 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FV 593
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 594 EHLYTPTVPHKDTTQVADTHDIAMVEADWREPLIRFLTSQELP-----RDKDEAERISRR 648
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 649 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 708
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 709 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 767
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 768 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 826
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 827 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 886
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 887 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 943
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 944 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1001
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1002 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1032
>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
Length = 2010
Score = 537 bits (1383), Expect = e-151
Identities = 319/931 (34%), Positives = 484/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1122 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1181
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKL+GF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1182 MKLNPEKCTFGVPSGKLVGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1241
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1242 RFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1301
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1302 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1361
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1362 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1419
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E + + W + FDG+ G G G V+
Sbjct: 1420 ----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVVL 1455
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1456 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1515
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1516 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFV 1571
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1572 EHLYTPTVPHKDTTQVAGTHDVAMVETDWREPLIRFLTSQELP-----QDKDEAERISRR 1626
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1627 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHSGICGNHAAARTIVGKAYRQGFF 1686
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1687 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1745
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 1746 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1804
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1805 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1864
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1865 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1921
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1922 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1979
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1980 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2010
>UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa]
Length = 1995
Score = 537 bits (1383), Expect = e-151
Identities = 323/933 (34%), Positives = 486/933 (51%), Gaps = 58/933 (6%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1107 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFTSIRAFR 1166
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1167 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1226
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1227 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1286
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1287 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1346
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1347 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1404
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1405 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 1440
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1441 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1500
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD L S V + + V
Sbjct: 1501 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLVNFGSKREVAPSD----VFV 1556
Query: 477 QRLERPSHVFAIGDVIDQAGENVVD--NKPWYHDIKQFLLSREYPPGASNKDKKTLRRLA 534
+ L P+ D AG + V W + +FL S+E P +DK R++
Sbjct: 1557 EHLYTPT--VPHKDTTQAAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERIS 1609
Query: 535 SR---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAG 591
R +++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G
Sbjct: 1610 RRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQG 1669
Query: 592 YYWMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASN 651
++W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA
Sbjct: 1670 FFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVG 1728
Query: 652 GHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVV 711
G+ + VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V
Sbjct: 1729 GYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVF 1787
Query: 712 QALCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALH 766
+ CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1788 KDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLW 1847
Query: 767 GYRTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEE 826
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE
Sbjct: 1848 SLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFHEDRYEEDRVDDLHRLEE 1904
Query: 827 KRMDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVV 886
R A+ R Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++
Sbjct: 1905 VREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFII 1962
Query: 887 KKAFSGGALILTHMDGVELPNPVNADIVKKYFA 919
+ G+ L DG + N N + +++++A
Sbjct: 1963 SEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1995
>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
Length = 2017
Score = 535 bits (1379), Expect = e-150
Identities = 319/931 (34%), Positives = 483/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1129 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1188
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1189 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1248
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1249 RFVSRLGERGMPFFKLLKKTDDFHWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1308
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1309 ATSQVVSTVLVVEREEDGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1368
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1369 YFQGHLVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1426
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1427 ----EWTECQEDTPAEKVEH--------------------WTMHFDGSKRLSGTGAGVVL 1462
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1463 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1522
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1523 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNKAADRLANFGSKREVAPSD----VFV 1578
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1579 EHLYAPTVPHKDTTQVAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRR 1633
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1634 SRLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1693
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1694 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAFGGY 1752
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNG V +
Sbjct: 1753 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKD 1811
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W E LP L
Sbjct: 1812 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSL 1871
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1872 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1928
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1929 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1986
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1987 VTRPGSYRLKREDGTLIDNSWNIEHLRRFYA 2017
>UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa]
Length = 1964
Score = 535 bits (1378), Expect = e-150
Identities = 321/931 (34%), Positives = 486/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1076 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAFR 1135
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1136 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1195
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ +K L +PP+L P PL++Y +
Sbjct: 1196 RFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDLKQLLTKPPVLASPHPQEPLLLYVS 1255
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1256 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1315
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ + G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1316 YFQGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA- 1373
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E+I + W + FDG+ G G G V+
Sbjct: 1374 ----EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVL 1409
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1410 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1469
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 1470 SCIDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-RETAPSDV---FV 1525
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + W +FL S+E P +DK R++ R
Sbjct: 1526 EHLYTPTVPHKDTTQDADTRDIAMVEADWREPFIRFLTSQELP-----QDKDEAERISRR 1580
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
++L LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1581 SKLYVLHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1640
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1641 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1699
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 1700 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1758
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ + W + LP L
Sbjct: 1759 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKSYAGKWVQQLPSVLWSL 1818
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1819 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYGEDRVDDLHRLEEVR 1875
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL+R Q R K +P +EGP+++ +
Sbjct: 1876 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRR--IQTTRDRHKLSPLWEGPFIISE 1933
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N + + +++++A
Sbjct: 1934 VTRPGSYRLKREDGTLVDNSWHIEHLRRFYA 1964
>UniRef100_Q60DY3 Putative polyprotein [Oryza sativa]
Length = 1799
Score = 535 bits (1378), Expect = e-150
Identities = 318/931 (34%), Positives = 484/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD+++K+ ++ + L + F +R ++
Sbjct: 911 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVIKTKQKDDLISDLEETFASIRAFR 970
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 971 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1030
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K +L EPP+L P PL++Y +
Sbjct: 1031 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVS 1090
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1091 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1150
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1151 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1208
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1209 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 1244
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1245 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1304
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1305 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFV 1360
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ I + + W +FL S+E P +DK R++ R
Sbjct: 1361 EHLYTPTVPHKDTTQIAGTHDVALVEADWREPFIRFLTSQELP-----QDKDEAERISRR 1415
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1416 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1475
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1476 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1534
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNG V +
Sbjct: 1535 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKD 1593
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1594 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSL 1653
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1654 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1710
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1711 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1768
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1769 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1799
>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
Length = 1986
Score = 535 bits (1378), Expect = e-150
Identities = 321/931 (34%), Positives = 485/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1098 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1157
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1158 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1217
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L +PP+L P PL++Y +
Sbjct: 1218 RFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVS 1277
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1278 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1337
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ + G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1338 YFQGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA- 1395
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E+I + W + FDG+ G G G V+
Sbjct: 1396 ----EWTECQEDTPVEKIEH--------------------WTMHFDGSKRLSGTGAGVVL 1431
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1432 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1491
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S R +DV V
Sbjct: 1492 SCIDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FV 1547
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + V+ W +FL S+E P +DK R++ R
Sbjct: 1548 EHLYTPTVPHKDTTQDADTHDVVMVEADWREPFIRFLSSQELP-----QDKDEAERISRR 1602
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1603 SKLYVMHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1662
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1663 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1721
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNGT V +
Sbjct: 1722 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1780
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1781 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1840
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1841 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAR 1897
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1898 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1955
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1956 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1986
>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
Length = 1756
Score = 535 bits (1378), Expect = e-150
Identities = 318/931 (34%), Positives = 484/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD+++K+ ++ + L + F +R ++
Sbjct: 868 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVIKTKQKDDLISDLEETFASIRAFR 927
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 928 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 987
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K +L EPP+L P PL++Y +
Sbjct: 988 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVS 1047
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1048 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1107
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1108 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1165
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1166 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 1201
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1202 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1261
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1262 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFV 1317
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ I + + W +FL S+E P +DK R++ R
Sbjct: 1318 EHLYTPTVPHKDTTQIAGTHDVALVEADWREPFIRFLTSQELP-----QDKDEAERISRR 1372
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1373 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1432
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1433 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1491
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNG V +
Sbjct: 1492 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKD 1550
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W + LP L
Sbjct: 1551 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSL 1610
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1611 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1667
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++ +
Sbjct: 1668 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1725
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1726 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1756
>UniRef100_Q75M60 Putative polyprotein [Oryza sativa]
Length = 2004
Score = 535 bits (1377), Expect = e-150
Identities = 319/931 (34%), Positives = 483/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1107 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1166
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1167 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1226
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1227 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1286
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1287 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1346
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1347 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1404
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1405 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 1440
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1441 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1500
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1501 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFV 1556
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1557 EHLYTPTVPHKDTTQVAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRR 1611
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1612 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1671
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1672 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1730
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNG V +
Sbjct: 1731 THLFVAIDKFSKWIEAKPVVTITADNAPDFF-INIVHRFGVPNRIITDNGRQFTGGVFKD 1789
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W E LP L
Sbjct: 1790 CCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSL 1849
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1850 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1906
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++
Sbjct: 1907 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISA 1964
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1965 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1995
>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
Length = 2026
Score = 535 bits (1377), Expect = e-150
Identities = 319/931 (34%), Positives = 483/931 (51%), Gaps = 54/931 (5%)
Query: 1 MPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYK 60
MPFGL NAGATYQR + F I + VE YVDD++VK+ ++ + L + F +R ++
Sbjct: 1129 MPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFR 1188
Query: 61 LRLNPDKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYIS 120
++LNP+KCTFGV SGKLLGF+VS +GI+ +P+KV AI M P T+K V+ G + +S
Sbjct: 1189 MKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALS 1248
Query: 121 RFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYFA 180
RF+S + P FKLL+K W E Q+AF+ K L EPP+L P PL++Y +
Sbjct: 1249 RFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVS 1308
Query: 181 VFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 236
+ + VL +++E G K + IY++S+ D +TRY ++K + ++L H
Sbjct: 1309 ATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSH 1368
Query: 237 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 296
Y H+ +++ P+ I G+IA+W + L DI FK + +IK LAD +A
Sbjct: 1369 YFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA- 1426
Query: 297 QPLDDYQPIEFDFPDEEIMYVKSKDCEEPLIGEGPDPNSKWGLVFDGAVNAYGKGIGAVI 356
++ + D P E++ + W + FDG+ G G G V+
Sbjct: 1427 ----EWTECQEDTPAEKMEH--------------------WTMHFDGSKRLSGTGAGVVL 1462
Query: 357 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 416
+SP G + + I F ++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW
Sbjct: 1463 ISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEW 1522
Query: 417 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKV 476
++ YR R+L F +EL H+ R N+ AD LA S V + + V
Sbjct: 1523 SCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFV 1578
Query: 477 QRLERPSHVFAIGDVIDQAGENVVDNKPWYHDIKQFLLSREYPPGASNKDKKTLRRLASR 536
+ L P+ + + + W + +FL S+E P +DK R++ R
Sbjct: 1579 EHLYTPTVPHKDTTQVAGTHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRR 1633
Query: 537 ---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHEGTFGTHATGHTMSRKLLRAGYY 593
+++ LYK++ +L RCV E QL+ D+H G G HA T+ K R G++
Sbjct: 1634 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1693
Query: 594 WMTMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGH 653
W T D + R C CQ +A +IH+P L I WPF++WG+DM+G + KA G+
Sbjct: 1694 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1752
Query: 654 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIRNNIICRYGVPSKIITDNGTNLNNNVVQA 713
+ VAID F+KW+EA +T F NI+ R+GVP++IITDNG V +
Sbjct: 1753 THLFVAIDKFSKWIEAKPVVTITADNAPDFF-INIVHRFGVPNRIITDNGRQFTGGVFKD 1811
Query: 714 LCEEFKIEHHNSSPYRPQMNGVVEAANKNI-----KRIVQKMVTTYRDWHEMLPYALHGY 768
CE+F I+ +S P NG VE AN I R+ ++ W E LP L
Sbjct: 1812 CCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSL 1871
Query: 769 RTTVRSSTGATPFSHVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 828
RTT +TG +PF VYG EA+LP EVE SLR E + + R D L+ +EE R
Sbjct: 1872 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1928
Query: 829 MDAMARGQSYQARMKTAFDKKVHPREFKTGELVLKRRISQQPDPRGKWTPNYEGPYVVKK 888
A+ + Y ++ ++ V R F G+LVL++ Q R K +P +EGP+++
Sbjct: 1929 EAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISA 1986
Query: 889 AFSGGALILTHMDGVELPNPVNADIVKKYFA 919
G+ L DG + N N + +++++A
Sbjct: 1987 VTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2017
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,609,759,845
Number of Sequences: 2790947
Number of extensions: 70384556
Number of successful extensions: 160952
Number of sequences better than 10.0: 5207
Number of HSP's better than 10.0 without gapping: 4578
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 146121
Number of HSP's gapped (non-prelim): 8355
length of query: 919
length of database: 848,049,833
effective HSP length: 137
effective length of query: 782
effective length of database: 465,690,094
effective search space: 364169653508
effective search space used: 364169653508
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)
Medicago: description of AC146807.4