BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146784.12 - phase: 0 /pseudo
(60 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6L4N7 Hypothetical protein P0473H02.5 [Oryza sativa] 62 3e-09
UniRef100_Q9FYP6 Putative transposable element Tip100 protein [O... 61 7e-09
UniRef100_Q6L3J8 Putative transposase [Solanum demissum] 45 4e-04
UniRef100_Q6L3Y1 Putative hAT family dimerisation domain contain... 44 0.001
UniRef100_Q7XWU4 OSJNBa0065B15.7 protein [Oryza sativa] 42 0.003
UniRef100_Q6ATH8 Hypothetical protein OSJNBa0093E24.3 [Oryza sat... 42 0.005
UniRef100_Q9LMA0 T29M8.13 protein [Arabidopsis thaliana] 41 0.007
UniRef100_Q7XEC8 Putative transposase [Oryza sativa] 41 0.009
UniRef100_Q9SZ82 Hypothetical protein F17A8.10 [Arabidopsis thal... 40 0.021
UniRef100_Q8S7P4 Putative transposase [Oryza sativa] 39 0.027
UniRef100_Q7XK77 OSJNBa0028M15.10 protein [Oryza sativa] 39 0.035
UniRef100_Q7XW70 OSJNBa0019J05.24 protein [Oryza sativa] 36 0.23
UniRef100_Q9SI24 Hypothetical protein At2g05020 [Arabidopsis tha... 36 0.30
UniRef100_Q7XBZ7 Putative transposase [Oryza sativa] 34 1.1
UniRef100_Q7XN27 OSJNBb0016D16.6 protein [Oryza sativa] 34 1.1
UniRef100_Q8S7R0 Putative transposase protein, 5'-partial [Oryza... 34 1.1
UniRef100_Q8LHH0 Putative transposase [Oryza sativa] 34 1.1
UniRef100_Q9SFX0 Hypothetical protein F15M4.13 [Arabidopsis thal... 32 5.6
>UniRef100_Q6L4N7 Hypothetical protein P0473H02.5 [Oryza sativa]
Length = 717
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
M++RF + +L CF+C D +SFS+FDVD L LADIY DFS DR +REQL ++
Sbjct: 551 MNNRFSKTFMDLLRCFACFDPDDSFSQFDVDMLLSLADIYSADFSMTDREILREQLHMFI 610
>UniRef100_Q9FYP6 Putative transposable element Tip100 protein [Oryza sativa]
Length = 802
Score = 61.2 bits (147), Expect = 7e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
M+HRF E S+ +L C S L+ +NSFS FDVDKL RLA+IY DF D +R QL ++
Sbjct: 619 MNHRFSEVSSELLVCMSSLNPRNSFSNFDVDKLVRLAEIYAEDFLVGDLMLLRTQLGNFI 678
>UniRef100_Q6L3J8 Putative transposase [Solanum demissum]
Length = 705
Score = 45.4 bits (106), Expect = 4e-04
Identities = 20/60 (33%), Positives = 36/60 (59%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L +CL+ SFS FD+ K+ R+A++Y DF + + + QL +Y+
Sbjct: 536 LNDRFDEVTTDLLHGIACLNPIKSFSSFDIRKIMRMAELYPDDFDESNMNILENQLASYI 595
>UniRef100_Q6L3Y1 Putative hAT family dimerisation domain containing protein [Solanum
demissum]
Length = 805
Score = 43.9 bits (102), Expect = 0.001
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L +CL+ SFS FD+ K R+A++Y DF + + + QL +Y+
Sbjct: 636 LNDRFDEVTTDLLHGIACLNPIKSFSSFDIRKKMRMAELYPDDFDESNMNILENQLASYI 695
>UniRef100_Q7XWU4 OSJNBa0065B15.7 protein [Oryza sativa]
Length = 639
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
+D+RF E S+ +L C S ++SF F+++ L LA +Y DF+ + + QL Y+
Sbjct: 478 LDNRFSETSSQLLICSSAFSPRDSFHDFNLENLMSLAKLYPSDFNSGNLRDLSHQLGLYI 537
>UniRef100_Q6ATH8 Hypothetical protein OSJNBa0093E24.3 [Oryza sativa]
Length = 774
Score = 41.6 bits (96), Expect = 0.005
Identities = 20/60 (33%), Positives = 33/60 (54%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
+++RF E + +L C + SFS F+VD L +LA Y DF ++ + QL+ Y+
Sbjct: 650 LNNRFDEVNTELLRCMASFSPAKSFSAFNVDNLVKLAKFYPSDFDVEEMNQLPFQLNRYI 709
>UniRef100_Q9LMA0 T29M8.13 protein [Arabidopsis thaliana]
Length = 811
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 4 RFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
RF E ++ +L C S L +SF +FD L RL + Y DFS +R ++ QL+ Y+
Sbjct: 646 RFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYL 702
>UniRef100_Q7XEC8 Putative transposase [Oryza sativa]
Length = 413
Score = 40.8 bits (94), Expect = 0.009
Identities = 20/60 (33%), Positives = 33/60 (54%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++++F E + +L C S SFS F+VD L +LA Y DF ++ + QL+ Y+
Sbjct: 131 LNNKFDEVNPELLRCMSSFSPAKSFSDFNVDNLVKLAKFYPNDFDVEEMNQLTFQLNRYI 190
>UniRef100_Q9SZ82 Hypothetical protein F17A8.10 [Arabidopsis thaliana]
Length = 664
Score = 39.7 bits (91), Expect = 0.021
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 4 RFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
RF E ++ +L C S L +SF +FD L RL + Y +FS +R ++ QL+ Y+
Sbjct: 548 RFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPDEFSFVERRSLDHQLEIYL 604
>UniRef100_Q8S7P4 Putative transposase [Oryza sativa]
Length = 811
Score = 39.3 bits (90), Expect = 0.027
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L C S L+ NSF+ +D ++ +LA Y +FS D + QL T++
Sbjct: 642 LNSRFDEVNMELLICMSALNPFNSFASYDAQQVLKLAKFYPKEFSTMDLIRLEMQLGTFI 701
>UniRef100_Q7XK77 OSJNBa0028M15.10 protein [Oryza sativa]
Length = 437
Score = 38.9 bits (89), Expect = 0.035
Identities = 19/60 (31%), Positives = 32/60 (52%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
+D+ F E S +L C S ++SF F+++ L LA +Y DF+ + + QL Y+
Sbjct: 259 LDNHFSETSFQLLICSSAFSPRDSFHDFNLENLMSLAKLYPSDFNSGNLRDLSHQLGLYI 318
>UniRef100_Q7XW70 OSJNBa0019J05.24 protein [Oryza sativa]
Length = 629
Score = 36.2 bits (82), Expect = 0.23
Identities = 17/48 (35%), Positives = 25/48 (51%)
Query: 13 LDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
L C + SFS F+VD L +LA Y DF ++ + QL+ Y+
Sbjct: 552 LRCMASFSPAKSFSAFNVDNLVKLAKFYPSDFDVEEMNQLPFQLNRYI 599
>UniRef100_Q9SI24 Hypothetical protein At2g05020 [Arabidopsis thaliana]
Length = 370
Score = 35.8 bits (81), Expect = 0.30
Identities = 20/56 (35%), Positives = 32/56 (56%)
Query: 5 FRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
F E ++ +L + L +SFS+F L RL ++Y DFS +R ++ QLD Y+
Sbjct: 245 FDEVNSEILFWIASLSPMDSFSQFKKSMLVRLTELYLDDFSFVERISLDHQLDIYL 300
>UniRef100_Q7XBZ7 Putative transposase [Oryza sativa]
Length = 1283
Score = 33.9 bits (76), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L C + ++F+ +D DKL +LA Y DFS + + L ++
Sbjct: 857 LNERFDEVNTDLLLCMAAFSPIDNFASWDKDKLIKLARFYPNDFSSTEMNHLPSALKLFL 916
>UniRef100_Q7XN27 OSJNBb0016D16.6 protein [Oryza sativa]
Length = 897
Score = 33.9 bits (76), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L C + ++F+ +D DKL +LA Y DFS + + L ++
Sbjct: 717 LNERFDEVNTDLLLCMAAFSPIDNFASWDKDKLIKLARFYPNDFSSTEMNHLPSALKLFL 776
>UniRef100_Q8S7R0 Putative transposase protein, 5'-partial [Oryza sativa]
Length = 881
Score = 33.9 bits (76), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L C + ++F+ +D DKL +LA Y DFS + + L ++
Sbjct: 351 LNERFDEVNTDLLLCMAAFSPIDNFASWDKDKLIKLARFYPNDFSSTEMNHLPSALKLFL 410
>UniRef100_Q8LHH0 Putative transposase [Oryza sativa]
Length = 897
Score = 33.9 bits (76), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 1 MDHRFRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGTIREQLDTYV 60
++ RF E + +L C + ++F+ +D DKL +LA Y DFS + + L ++
Sbjct: 717 LNERFDEVNTDLLLCMAAFSPIDNFASWDKDKLIKLARFYPNDFSSTEMNHLPSALKLFL 776
>UniRef100_Q9SFX0 Hypothetical protein F15M4.13 [Arabidopsis thaliana]
Length = 381
Score = 31.6 bits (70), Expect = 5.6
Identities = 14/37 (37%), Positives = 22/37 (58%)
Query: 15 CFSCLDSKNSFSKFDVDKLARLADIYHVDFSDDDRGT 51
CFSCL+++ + + ++D L+ L D V D RGT
Sbjct: 3 CFSCLNTQTNDMRINIDTLSDLTDYASVATKIDPRGT 39
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.326 0.141 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,635,484
Number of Sequences: 2790947
Number of extensions: 2810647
Number of successful extensions: 8595
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8577
Number of HSP's gapped (non-prelim): 18
length of query: 60
length of database: 848,049,833
effective HSP length: 36
effective length of query: 24
effective length of database: 747,575,741
effective search space: 17941817784
effective search space used: 17941817784
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146784.12