BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146759.10 + phase: 1 /partial
(178 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FJA6 40S ribosomal protein S3 [Arabidopsis thaliana] 303 1e-81
UniRef100_Q6YTY2 Putative 40S ribosomal protein [Oryza sativa] 301 5e-81
UniRef100_Q75G91 Putative ribosomal protein [Oryza sativa] 301 6e-81
UniRef100_Q9M339 Ribosomal protein S3a-like protein [Arabidopsis... 298 5e-80
UniRef100_Q8L804 Putative 40S ribosomal protein S3 [Triticum aes... 294 8e-79
UniRef100_Q9SIP7 40S ribosomal protein; contains C-terminal doma... 293 1e-78
UniRef100_Q6TLG8 Ribosomal protein S3 [Brachydanio rerio] 261 4e-69
UniRef100_Q6EV05 S3e ribosomal protein [Carabus granulatus] 261 4e-69
UniRef100_Q6QZI0 40S ribosomal protein S3 [Pseudopleuronectes am... 261 6e-69
UniRef100_UPI00003AA21B UPI00003AA21B UniRef100 entry 260 1e-68
UniRef100_Q6P8G2 Ribosomal protein S3 [Xenopus tropicalis] 260 1e-68
UniRef100_Q6EE77 Ribosomal protein S3 [Latimeria chalumnae] 260 1e-68
UniRef100_Q90YS2 40S ribosomal protein S3 [Ictalurus punctatus] 260 1e-68
UniRef100_Q7ZYT3 Similar to ribosomal protein S3 [Xenopus laevis] 259 2e-68
UniRef100_Q9D0A2 Mus musculus 10 days embryo whole body cDNA, RI... 259 2e-68
UniRef100_Q5UAP2 Ribosomal protein S3 [Bombyx mori] 259 2e-68
UniRef100_P62908 40S ribosomal protein S3 [Mus musculus] 259 2e-68
UniRef100_P47835 40S ribosomal protein S3B [Xenopus laevis] 259 2e-68
UniRef100_P02350 40S ribosomal protein S3A [Xenopus laevis] 259 2e-68
UniRef100_Q7ZVD9 Ribosomal protein S3 [Brachydanio rerio] 259 3e-68
>UniRef100_Q9FJA6 40S ribosomal protein S3 [Arabidopsis thaliana]
Length = 248
Score = 303 bits (776), Expect = 1e-81
Identities = 150/173 (86%), Positives = 160/173 (91%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVP 173
VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ YI PA VV VP
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233
>UniRef100_Q6YTY2 Putative 40S ribosomal protein [Oryza sativa]
Length = 233
Score = 301 bits (771), Expect = 5e-81
Identities = 152/174 (87%), Positives = 158/174 (90%), Gaps = 5/174 (2%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTSVVQKRF FPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 63 EKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 122
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQG
Sbjct: 123 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQG 182
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 174
VLGIKVKIMLDWDPKGKQGP TPLPD+VTIH PK+E+E+ +P E+PV
Sbjct: 183 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTA-----EIPV 231
>UniRef100_Q75G91 Putative ribosomal protein [Oryza sativa]
Length = 228
Score = 301 bits (770), Expect = 6e-81
Identities = 152/167 (91%), Positives = 157/167 (93%), Gaps = 1/167 (0%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVA 167
VLGIKVKIMLDWDPKGK GP TPLPD+VTIH PKEEEE +RP ++A
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEE-LRPPVLIA 226
>UniRef100_Q9M339 Ribosomal protein S3a-like protein [Arabidopsis thaliana]
Length = 249
Score = 298 bits (762), Expect = 5e-80
Identities = 148/167 (88%), Positives = 155/167 (92%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVA 167
VLGIKVK+MLDWDPKG GPKTPLPD+V IH+PKEEE PA V A
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAA 227
>UniRef100_Q8L804 Putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 294 bits (752), Expect = 8e-79
Identities = 150/166 (90%), Positives = 155/166 (93%), Gaps = 1/166 (0%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTSVVQKRF F EN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVV 166
VLGIKVKIMLDWDPKGK GP TPLPD+VTIH PKEE E +RP A+V
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEENE-LRPPALV 225
>UniRef100_Q9SIP7 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
Length = 250
Score = 293 bits (750), Expect = 1e-78
Identities = 145/167 (86%), Positives = 153/167 (90%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVA 167
VLGIKVKIMLDWDP GK GPKTPLPD+V IH PK++ Y PA A
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAA 227
>UniRef100_Q6TLG8 Ribosomal protein S3 [Brachydanio rerio]
Length = 245
Score = 261 bits (668), Expect = 4e-69
Identities = 137/178 (76%), Positives = 145/178 (80%), Gaps = 3/178 (1%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPVPV 178
VLGIKVKIML WDP GK GPK PLPD V+I PKEE + P V+ VPV
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE---VLPTTPVSEQKGAKPEVPV 235
>UniRef100_Q6EV05 S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 261 bits (668), Expect = 4e-69
Identities = 130/156 (83%), Positives = 138/156 (88%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P DY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V++ PKEE
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKRPLPDNVSVVEPKEE 216
>UniRef100_Q6QZI0 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 261 bits (667), Expect = 6e-69
Identities = 138/184 (75%), Positives = 147/184 (79%), Gaps = 9/184 (4%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKE---------EEEYIRPAAVVANDIE 171
VLGIKVKIML WDP GK GPK PLPD V+I PKE E++ +P A V
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTPISEQKGCKPEAPVMPQGG 240
Query: 172 VPVP 175
PVP
Sbjct: 241 TPVP 244
>UniRef100_UPI00003AA21B UPI00003AA21B UniRef100 entry
Length = 243
Score = 260 bits (665), Expect = 1e-68
Identities = 132/156 (84%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PKEE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>UniRef100_Q6P8G2 Ribosomal protein S3 [Xenopus tropicalis]
Length = 246
Score = 260 bits (665), Expect = 1e-68
Identities = 132/156 (84%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PKEE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>UniRef100_Q6EE77 Ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 260 bits (665), Expect = 1e-68
Identities = 132/156 (84%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 51 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 110
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 111 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PKEE
Sbjct: 171 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 206
>UniRef100_Q90YS2 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 260 bits (664), Expect = 1e-68
Identities = 137/178 (76%), Positives = 144/178 (79%), Gaps = 3/178 (1%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPVPV 178
VLGIKVKIML WDP GK GPK PLPD V+I PKEE I P V+ VPV
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE---ILPTTPVSEQKGAKPEVPV 235
>UniRef100_Q7ZYT3 Similar to ribosomal protein S3 [Xenopus laevis]
Length = 246
Score = 259 bits (662), Expect = 2e-68
Identities = 131/156 (83%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UniRef100_Q9D0A2 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2610034C13 product:ribosomal
protein S3, full insert sequence [Mus musculus]
Length = 243
Score = 259 bits (662), Expect = 2e-68
Identities = 131/156 (83%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UniRef100_Q5UAP2 Ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 259 bits (662), Expect = 2e-68
Identities = 129/178 (72%), Positives = 144/178 (80%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 62 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 121
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P DY+++A RHVLLRQG
Sbjct: 122 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPVPV 178
VLGIKVKIML WD +GK GPK P PD + + PK+E + P + V + P+P PV
Sbjct: 182 VLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQPV 239
>UniRef100_P62908 40S ribosomal protein S3 [Mus musculus]
Length = 243
Score = 259 bits (662), Expect = 2e-68
Identities = 131/156 (83%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UniRef100_P47835 40S ribosomal protein S3B [Xenopus laevis]
Length = 246
Score = 259 bits (662), Expect = 2e-68
Identities = 131/156 (83%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UniRef100_P02350 40S ribosomal protein S3A [Xenopus laevis]
Length = 246
Score = 259 bits (662), Expect = 2e-68
Identities = 131/156 (83%), Positives = 138/156 (87%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UniRef100_Q7ZVD9 Ribosomal protein S3 [Brachydanio rerio]
Length = 245
Score = 259 bits (661), Expect = 3e-68
Identities = 131/156 (83%), Positives = 137/156 (86%)
Query: 1 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 60
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 61 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 120
GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 121 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 156
VLGIKVKIML WDP GK GPK PLPD V+I PKEE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.319 0.138 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,488,253
Number of Sequences: 2790947
Number of extensions: 11722347
Number of successful extensions: 27994
Number of sequences better than 10.0: 599
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 27553
Number of HSP's gapped (non-prelim): 609
length of query: 178
length of database: 848,049,833
effective HSP length: 119
effective length of query: 59
effective length of database: 515,927,140
effective search space: 30439701260
effective search space used: 30439701260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC146759.10