
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146758.5 - phase: 0 /pseudo
(1461 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_UPI0000360432 UPI0000360432 UniRef100 entry 38 2.6
UniRef100_UPI0000363FF3 UPI0000363FF3 UniRef100 entry 36 7.7
>UniRef100_UPI0000360432 UPI0000360432 UniRef100 entry
Length = 324
Score = 37.7 bits (86), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (58%)
Query: 353 CYY*YWCYALFYCFRLCFCFGSCFV*Y 379
CYY Y CY +YC+ C C+ C+ Y
Sbjct: 250 CYYCYCCYCCYYCYCCCCCYCCCYYCY 276
>UniRef100_UPI0000363FF3 UPI0000363FF3 UniRef100 entry
Length = 130
Score = 36.2 bits (82), Expect = 7.7
Identities = 12/22 (54%), Positives = 13/22 (58%)
Query: 10 CCVSCCSTSCCPSCGTTT*RKC 31
CC SCC + CC C TTT C
Sbjct: 48 CCCSCCCSCCCSCCSTTTTASC 69
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.371 0.167 0.662
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,837,511,761
Number of Sequences: 2790947
Number of extensions: 60622390
Number of successful extensions: 238936
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 238716
Number of HSP's gapped (non-prelim): 130
length of query: 1461
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1321
effective length of database: 457,317,253
effective search space: 604116091213
effective search space used: 604116091213
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 82 (36.2 bits)
Medicago: description of AC146758.5