BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146757.12 + phase: 0 /partial
(192 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SQR0 T11I18.13 protein [Arabidopsis thaliana] 162 4e-39
UniRef100_Q9SMV0 Hypothetical protein T2J13.20 [Arabidopsis thal... 38 0.12
UniRef100_UPI0000437969 UPI0000437969 UniRef100 entry 33 5.2
UniRef100_UPI0000437968 UPI0000437968 UniRef100 entry 33 5.2
UniRef100_Q73AB6 Sensor histidine kinase, putative [Bacillus cer... 33 5.2
UniRef100_Q9ZI90 Putative histidine kinase [Lactobacillus sakei] 33 5.2
UniRef100_Q64WI0 Hypothetical protein [Bacteroides fragilis] 33 5.2
UniRef100_UPI00003CB6A0 UPI00003CB6A0 UniRef100 entry 32 6.8
UniRef100_UPI000025828C UPI000025828C UniRef100 entry 32 8.9
UniRef100_Q82ZT5 Sugar-binding transcriptional regulator, LacI f... 32 8.9
UniRef100_Q8A3N0 Acetyl-CoA synthetase [Bacteroides thetaiotaomi... 32 8.9
UniRef100_Q813R1 Sensory Transduction Protein Kinase [Bacillus c... 32 8.9
UniRef100_Q8I3R5 Hypothetical protein PFE0980c [Plasmodium falci... 32 8.9
UniRef100_Q6FKB4 Similar to sp|Q05050 Saccharomyces cerevisiae Y... 32 8.9
UniRef100_O58996 Hypothetical protein PH1257 [Pyrococcus horikos... 32 8.9
>UniRef100_Q9SQR0 T11I18.13 protein [Arabidopsis thaliana]
Length = 236
Score = 162 bits (410), Expect = 4e-39
Identities = 87/192 (45%), Positives = 127/192 (65%), Gaps = 5/192 (2%)
Query: 3 ALTEKVHEVIRSEEKATRKFSYTVSGVLSSGGSS-TSRSDNLQKLL-EVTEKYSVYRFKT 60
A+ + V E I+SE KA +V +L+S SR D+L+ L+ + EKY +Y+F
Sbjct: 48 AVKKYVEEAIQSEMKAISDTPNSVRSILNSSDQMYASRCDSLRALINDAKEKYVIYKFVP 107
Query: 61 RSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQSEARRRALVLLCFVYMNTN 120
SC FID +G T +++++ L SK D L +S KL+DGIN++E+RRRAL+L C +++ N
Sbjct: 108 SSCMFIDPNG-TKEIDLKVLELSKPDPLGTWSTKLVDGINKNESRRRALILFCLYFLDIN 166
Query: 121 AKDAYVTSVDRKGFDVLAKVTGPVSKDGVGQYQWKELRFMFEQEANDVETFCQHLVQMEE 180
A+DAY+ SVDRKGF +L KV P ++ +YQW+E RF FE+E DVE FC LV+ME+
Sbjct: 167 ARDAYMVSVDRKGFHLLGKV--PSEQEAGDEYQWREFRFEFEEEVKDVEAFCHQLVEMEQ 224
Query: 181 EVIKKVSASSGL 192
EV+ K + +GL
Sbjct: 225 EVVSKFTDHTGL 236
>UniRef100_Q9SMV0 Hypothetical protein T2J13.20 [Arabidopsis thaliana]
Length = 1229
Score = 38.1 bits (87), Expect = 0.12
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 31 SSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAP 90
S G S D+ Q + + Y+ + I G +V +ED+ ++ D +A
Sbjct: 1078 SKAGGDESEIDSSQDE-KARNVVAFYKLEMIRIQLITAQGDQTEVEVEDVRKAQPDAIAH 1136
Query: 91 FSAKLIDGINQSEAR-RRALVLLCFVYMNTNAKDAYVTSVDRKGFDV 136
SA++I + +S + AL LC+ + + A++ + +D GFD+
Sbjct: 1137 ASAEIISRLEESGDKITEALKSLCWRHNSIQAEEVKLIGIDSLGFDL 1183
>UniRef100_UPI0000437969 UPI0000437969 UniRef100 entry
Length = 792
Score = 32.7 bits (73), Expect = 5.2
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 14 SEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFK 59
SE++A + FS VL SG S SR L+ L +TE +V R +
Sbjct: 568 SEDRAAKFFSGEADAVLLSGSSEVSRHSVLRSQLSITELIAVSRME 613
>UniRef100_UPI0000437968 UPI0000437968 UniRef100 entry
Length = 1699
Score = 32.7 bits (73), Expect = 5.2
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 14 SEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFK 59
SE++A + FS VL SG S SR L+ L +TE +V R +
Sbjct: 1475 SEDRAAKFFSGEADAVLLSGSSEVSRHSVLRSQLSITELIAVSRME 1520
>UniRef100_Q73AB6 Sensor histidine kinase, putative [Bacillus cereus]
Length = 366
Score = 32.7 bits (73), Expect = 5.2
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 43 LQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQS 102
L+ + TE+ ++R K FI+ G DVNI + D+++P K+I G N +
Sbjct: 236 LKNMKPPTEQIGIHRMKL----FIEEFAGKHDVNIPFVYKGNLDMISPIQWKII-GENVT 290
Query: 103 EARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDVLAKV 140
EA A+ DA V S+D + + KV
Sbjct: 291 EALTNAM----------KYADATVISIDIHVLNKMVKV 318
>UniRef100_Q9ZI90 Putative histidine kinase [Lactobacillus sakei]
Length = 478
Score = 32.7 bits (73), Expect = 5.2
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 49 VTEKYSVYRF-KTRSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQSEA 104
V +Y +YR + R+ T + G FDV+I++ G + D LA +++ +N+SEA
Sbjct: 186 VLARYQIYRISRLRNATHLVAEGD-FDVHIDNPGKDELDDLATDFNEMVHSLNESEA 241
>UniRef100_Q64WI0 Hypothetical protein [Bacteroides fragilis]
Length = 857
Score = 32.7 bits (73), Expect = 5.2
Identities = 24/83 (28%), Positives = 38/83 (44%), Gaps = 12/83 (14%)
Query: 81 GTSKADLLAPFSAKLIDGINQSEARRRA---LVLLCFVYMNTNAKDAYVTSVD---RKGF 134
G K + PF+ + DG+N+ E+R L+L+ + N Y S D RK
Sbjct: 393 GKEKIPVQTPFALSVRDGMNEVESRHNMLTDLLLMSEIKGYVNNPQYYFESRDDTRRKAI 452
Query: 135 DVLAKVTGPVSKDGVGQYQWKEL 157
D+L +V G +Y WK++
Sbjct: 453 DLLLRV------QGWRRYSWKQM 469
>UniRef100_UPI00003CB6A0 UPI00003CB6A0 UniRef100 entry
Length = 366
Score = 32.3 bits (72), Expect = 6.8
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 43 LQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQS 102
L+ + TE+ ++R K FI+ G D+NI + D+++P K+I G N +
Sbjct: 236 LKNMKPPTEQIGIHRMKL----FIEEFAGKHDINIPFVYKGNLDMISPIQWKII-GENVT 290
Query: 103 EARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDVLAKV 140
EA A+ DA V S+D + + KV
Sbjct: 291 EALTNAM----------KYADATVISIDIHVLNKMVKV 318
>UniRef100_UPI000025828C UPI000025828C UniRef100 entry
Length = 375
Score = 32.0 bits (71), Expect = 8.9
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 16/119 (13%)
Query: 47 LEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKA----DLLAPFSAKLIDGINQS 102
LEV EKY K +D HGG F IE L T K+ + AP S + N+
Sbjct: 228 LEVCEKYRDLALKGGLSIRLDTHGGRF---IEGLDTEKSYAVLESQAPKSIRQYRSENEM 284
Query: 103 EARRRALVLLCFVYMNTNAKDAY----VTSVDRKGFD-----VLAKVTGPVSKDGVGQY 152
+ V +Y D Y V V GF V++ V P+ G G Y
Sbjct: 285 KWLVGTGVTAAAIYHMRQTLDKYKFHKVKIVASSGFSPAKCKVMSSVNAPIDVIGTGSY 343
>UniRef100_Q82ZT5 Sugar-binding transcriptional regulator, LacI family [Enterococcus
faecalis]
Length = 331
Score = 32.0 bits (71), Expect = 8.9
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 80 LGTSKADLLAPFSAKLIDGINQSEARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDVLAK 139
+G D+ PF A+LI GI + +++LC + + Y+T + R+ D
Sbjct: 67 IGVIVPDITNPFFAQLIRGIESVLYKENFILMLCNADQDVTREHEYLTELIRRSVDGFVI 126
Query: 140 VTGPVSKDGVGQ 151
+ +S + +
Sbjct: 127 ASSEISNQTINE 138
>UniRef100_Q8A3N0 Acetyl-CoA synthetase [Bacteroides thetaiotaomicron]
Length = 686
Score = 32.0 bits (71), Expect = 8.9
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 119 TNAKDAYVTSVDRKGFDVLAKVTGPVSKDGVG 150
+N K+ V R GF V+AKV GPV K VG
Sbjct: 505 SNKKEEVVDFARRCGFPVVAKVVGPVHKSDVG 536
>UniRef100_Q813R1 Sensory Transduction Protein Kinase [Bacillus cereus]
Length = 366
Score = 32.0 bits (71), Expect = 8.9
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 43 LQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQS 102
L+ + TE+ ++R K FI+ G DVNI + D+++P K+I G N +
Sbjct: 236 LKNMKPPTEQIGIHRMKL----FIEEFAGKNDVNIPFVYKGNLDMISPIQWKII-GENVT 290
Query: 103 EARRRALVLLCFVYMNTNAKDAYVTSVDRKGFDVLAKV 140
EA A+ DA V S+D + + KV
Sbjct: 291 EALTNAM----------KYADATVISIDIHVLNKMVKV 318
>UniRef100_Q8I3R5 Hypothetical protein PFE0980c [Plasmodium falciparum]
Length = 2488
Score = 32.0 bits (71), Expect = 8.9
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 8/71 (11%)
Query: 74 DVNIE---DLGTSKADLLAPFSAKLIDGINQSEARRRALVLLCFVYMN-----TNAKDAY 125
D++IE DL S +LL P++ +IDGIN + + MN N K AY
Sbjct: 1937 DISIESSKDLNISSNNLLTPYTNNMIDGINIQSTNEARTINTKMILMNPLINADNNKIAY 1996
Query: 126 VTSVDRKGFDV 136
++ K +V
Sbjct: 1997 KNMLNNKYLNV 2007
>UniRef100_Q6FKB4 Similar to sp|Q05050 Saccharomyces cerevisiae YMR031c [Candida
glabrata]
Length = 885
Score = 32.0 bits (71), Expect = 8.9
Identities = 20/62 (32%), Positives = 33/62 (52%)
Query: 1 AKALTEKVHEVIRSEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKT 60
AKAL+ ++ + E+A T S V +STSR+ ++ K+L+ E+ + R K
Sbjct: 138 AKALSVGTEKLFTASEEARHAGQKTYSIVSQVSAASTSRAMDMSKVLKGAERKAESRLKE 197
Query: 61 RS 62
RS
Sbjct: 198 RS 199
>UniRef100_O58996 Hypothetical protein PH1257 [Pyrococcus horikoshii]
Length = 227
Score = 32.0 bits (71), Expect = 8.9
Identities = 19/67 (28%), Positives = 35/67 (51%), Gaps = 9/67 (13%)
Query: 42 NLQKLLEVTEKYSVYRFKTRSCTFIDGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQ 101
NL++L +++EKY ++ I G GG F+ + D+ KA ++ + K DG++
Sbjct: 165 NLEELKKLSEKYGIH---------IAGEGGEFETFVLDMPFFKAKIVIDDAEKFWDGLSG 215
Query: 102 SEARRRA 108
+RA
Sbjct: 216 KFIIKRA 222
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,119,314
Number of Sequences: 2790947
Number of extensions: 10864932
Number of successful extensions: 32062
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 32054
Number of HSP's gapped (non-prelim): 15
length of query: 192
length of database: 848,049,833
effective HSP length: 120
effective length of query: 72
effective length of database: 513,136,193
effective search space: 36945805896
effective search space used: 36945805896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)
Medicago: description of AC146757.12