BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.7 - phase: 0
(96 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9XG77 Proteasome subunit alpha type 6 [Nicotiana taba... 166 1e-40
UniRef100_O81147 Proteasome subunit alpha type 6-2 [Arabidopsis ... 162 2e-39
UniRef100_O48551 Proteasome subunit alpha type 6 [Glycine max] 161 3e-39
UniRef100_O81146 Proteasome subunit alpha type 6-1 [Arabidopsis ... 159 2e-38
UniRef100_Q9FER4 20S proteasome alpha subunit [Zea mays] 158 3e-38
UniRef100_Q9LSU3 Proteasome subunit alpha type 6 [Oryza sativa] 157 5e-38
UniRef100_Q8RWN8 Multicatalytic endopeptidase complex alpha subu... 157 6e-38
UniRef100_Q43285 Proteasome subunit alpha type [Arabidopsis thal... 146 1e-34
UniRef100_UPI00003ADEA4 UPI00003ADEA4 UniRef100 entry 127 9e-29
UniRef100_Q9QUM9 Proteasome subunit alpha type 6 [Mus musculus] 125 2e-28
UniRef100_P60900 Proteasome subunit alpha type 6 [Homo sapiens] 125 2e-28
UniRef100_Q5XGL4 Hypothetical protein [Xenopus laevis] 124 6e-28
UniRef100_Q6P7Z3 Proteasome (Prosome, macropain) subunit, alpha ... 124 7e-28
UniRef100_Q6DGY8 Zgc:92716 [Brachydanio rerio] 124 7e-28
UniRef100_Q6AZR7 Psma6-prov protein [Xenopus laevis] 124 7e-28
UniRef100_UPI00002BB27D UPI00002BB27D UniRef100 entry 122 2e-27
UniRef100_UPI000035F06D UPI000035F06D UniRef100 entry 122 2e-27
UniRef100_Q90ZS4 Proteasome subunit alpha Type 6-A [Brachydanio ... 122 2e-27
UniRef100_Q7SXN6 Hypothetical protein [Brachydanio rerio] 122 2e-27
UniRef100_UPI00002BB50C UPI00002BB50C UniRef100 entry 122 3e-27
>UniRef100_Q9XG77 Proteasome subunit alpha type 6 [Nicotiana tabacum]
Length = 246
Score = 166 bits (420), Expect = 1e-40
Identities = 82/84 (97%), Positives = 83/84 (98%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQTSV+HLFPITKYLGLLATGMT
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMT 84
>UniRef100_O81147 Proteasome subunit alpha type 6-2 [Arabidopsis thaliana]
Length = 246
Score = 162 bits (410), Expect = 2e-39
Identities = 80/87 (91%), Positives = 83/87 (94%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LDQ+SV+HLFP+TKYLGLLATGMT S
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADS 87
>UniRef100_O48551 Proteasome subunit alpha type 6 [Glycine max]
Length = 246
Score = 161 bits (408), Expect = 3e-39
Identities = 79/84 (94%), Positives = 81/84 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRG DS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LD TSVTHLFPITKYLGLLATGMT
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMT 84
>UniRef100_O81146 Proteasome subunit alpha type 6-1 [Arabidopsis thaliana]
Length = 246
Score = 159 bits (401), Expect = 2e-38
Identities = 77/84 (91%), Positives = 81/84 (95%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AGITSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQ+SVTHLFPITKY+GL+ATG+T
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGIT 84
>UniRef100_Q9FER4 20S proteasome alpha subunit [Zea mays]
Length = 246
Score = 158 bits (400), Expect = 3e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AG+TSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGADSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQTSVTHLFPITKY+GLLATG+T
Sbjct: 61 LDQTSVTHLFPITKYVGLLATGLT 84
>UniRef100_Q9LSU3 Proteasome subunit alpha type 6 [Oryza sativa]
Length = 246
Score = 157 bits (398), Expect = 5e-38
Identities = 75/84 (89%), Positives = 81/84 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AG+TSIGVRG DSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LD TSVTHLFPITKY+GLLATG+T
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLT 84
>UniRef100_Q8RWN8 Multicatalytic endopeptidase complex alpha subunit-like
[Arabidopsis thaliana]
Length = 246
Score = 157 bits (397), Expect = 6e-38
Identities = 76/84 (90%), Positives = 81/84 (95%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AGITSIGVRG DSVCVVTQK+VPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKEVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMT 84
LDQ+SVTHLFPITKY+GL+ATG+T
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGIT 84
>UniRef100_Q43285 Proteasome subunit alpha type [Arabidopsis thaliana]
Length = 114
Score = 146 bits (368), Expect = 1e-34
Identities = 71/83 (85%), Positives = 77/83 (92%)
Query: 2 SRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKLL 61
SRGSG GYDRHITIFSPEGRL+QVEYAFKA K AGITS+GVRG DSVCVVTQKKVPDKL+
Sbjct: 1 SRGSGAGYDRHITIFSPEGRLYQVEYAFKAEKTAGITSLGVRGKDSVCVVTQKKVPDKLV 60
Query: 62 DQTSVTHLFPITKYLGLLATGMT 84
DQ+SVTHLFPITKY+ L ATG+T
Sbjct: 61 DQSSVTHLFPITKYIVLGATGIT 83
>UniRef100_UPI00003ADEA4 UPI00003ADEA4 UniRef100 entry
Length = 253
Score = 127 bits (318), Expect = 9e-29
Identities = 60/87 (68%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG DS +VTQKKVPDKL
Sbjct: 8 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVIVTQKKVPDKL 67
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD +VTHLF IT+ +G + TGMT S
Sbjct: 68 LDSNTVTHLFSITENIGCVMTGMTADS 94
>UniRef100_Q9QUM9 Proteasome subunit alpha type 6 [Mus musculus]
Length = 246
Score = 125 bits (314), Expect = 2e-28
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADS 87
>UniRef100_P60900 Proteasome subunit alpha type 6 [Homo sapiens]
Length = 246
Score = 125 bits (314), Expect = 2e-28
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADS 87
>UniRef100_Q5XGL4 Hypothetical protein [Xenopus laevis]
Length = 246
Score = 124 bits (311), Expect = 6e-28
Identities = 59/87 (67%), Positives = 69/87 (78%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQ+KVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD +VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSNTVTHLFKITENIGCVMTGMTADS 87
>UniRef100_Q6P7Z3 Proteasome (Prosome, macropain) subunit, alpha type 6 [Xenopus
tropicalis]
Length = 246
Score = 124 bits (310), Expect = 7e-28
Identities = 59/87 (67%), Positives = 69/87 (78%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQ+KVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD +VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSNTVTHLFRITESIGCVMTGMTADS 87
>UniRef100_Q6DGY8 Zgc:92716 [Brachydanio rerio]
Length = 246
Score = 124 bits (310), Expect = 7e-28
Identities = 59/87 (67%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + +GMT S
Sbjct: 61 LDSSTVTHLFRITENIGCVMSGMTADS 87
>UniRef100_Q6AZR7 Psma6-prov protein [Xenopus laevis]
Length = 246
Score = 124 bits (310), Expect = 7e-28
Identities = 59/87 (67%), Positives = 69/87 (78%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQ+KVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD +VTHLF IT+ +G + TGMT S
Sbjct: 61 LDSNTVTHLFRITENIGCVMTGMTADS 87
>UniRef100_UPI00002BB27D UPI00002BB27D UniRef100 entry
Length = 246
Score = 122 bits (307), Expect = 2e-27
Identities = 59/87 (67%), Positives = 69/87 (78%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT +G + +GMT S
Sbjct: 61 LDASTVTHLFRITDNIGCVMSGMTADS 87
>UniRef100_UPI000035F06D UPI000035F06D UniRef100 entry
Length = 261
Score = 122 bits (306), Expect = 2e-27
Identities = 59/87 (67%), Positives = 68/87 (77%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D VVTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD +VTHLF IT +G + +GMT S
Sbjct: 61 LDAATVTHLFRITDNIGCVMSGMTADS 87
>UniRef100_Q90ZS4 Proteasome subunit alpha Type 6-A [Brachydanio rerio]
Length = 233
Score = 122 bits (306), Expect = 2e-27
Identities = 57/87 (65%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D V+TQ+KVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVITQRKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + +GMT S
Sbjct: 61 LDSSTVTHLFRITENIGCVMSGMTADS 87
>UniRef100_Q7SXN6 Hypothetical protein [Brachydanio rerio]
Length = 246
Score = 122 bits (306), Expect = 2e-27
Identities = 57/87 (65%), Positives = 70/87 (79%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRG D V+TQ+KVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVITQRKVPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATGMTGVS 87
LD ++VTHLF IT+ +G + +GMT S
Sbjct: 61 LDSSTVTHLFRITENIGCVMSGMTADS 87
>UniRef100_UPI00002BB50C UPI00002BB50C UniRef100 entry
Length = 246
Score = 122 bits (305), Expect = 3e-27
Identities = 56/82 (68%), Positives = 70/82 (85%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGNDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ +G+TS+GVRG DSV VVTQKK+PDKL
Sbjct: 1 MSRGSNAGFDRHITIFSPEGRLYQVEYAFKAISQSGLTSVGVRGTDSVVVVTQKKIPDKL 60
Query: 61 LDQTSVTHLFPITKYLGLLATG 82
LD ++VT++F +T +G + TG
Sbjct: 61 LDSSTVTNMFRLTPRIGCVMTG 82
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.139 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,571,878
Number of Sequences: 2790947
Number of extensions: 5339628
Number of successful extensions: 10943
Number of sequences better than 10.0: 466
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10276
Number of HSP's gapped (non-prelim): 469
length of query: 96
length of database: 848,049,833
effective HSP length: 72
effective length of query: 24
effective length of database: 647,101,649
effective search space: 15530439576
effective search space used: 15530439576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146756.7