BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146751.5 + phase: 0 /pseudo
         (455 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7U7P3 Endopeptidase Clp ATP-binding chain C [Synechoc...   385  e-105
UniRef100_Q8YST5 Endopeptidase Clp ATP-binding chain [Anabaena sp.]   379  e-104
UniRef100_P51332 ATP-dependent Clp protease ATP-binding subunit ...   364  2e-99
UniRef100_Q6B8Z6 Clp protease ATP binding subunit [Gracilaria te...   363  4e-99
UniRef100_Q8R7S1 ATPases with chaperone activity, ATP-binding su...   362  9e-99
UniRef100_Q6ACR4 ATP-dependent Clp protease, ATP-binding subunit...   351  3e-95
UniRef100_Q8FMH5 Putative endopeptidase Clp ATP-binding chain C ...   350  5e-95
UniRef100_Q6NFB1 ATP-dependent Clp protease ATP-binding subunit ...   348  1e-94
UniRef100_Q8NMA0 ATPases with chaperone activity, ATP-binding su...   347  4e-94
UniRef100_O84288 Probable ATP-dependent Clp protease ATP-binding...   347  5e-94
UniRef100_Q823Q2 ATP-dependent Clp protease, ATP-binding subunit...   345  2e-93
UniRef100_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding...   345  2e-93
UniRef100_Q83H06 ATP-dependent Clp protease ATP-binding subunit ...   341  2e-92
UniRef100_Q9Z8A6 Probable ATP-dependent Clp protease ATP-binding...   341  2e-92
UniRef100_UPI00003113CE UPI00003113CE UniRef100 entry                 341  3e-92
UniRef100_Q8G871 Protease [Bifidobacterium longum]                    340  4e-92
UniRef100_UPI00003247C1 UPI00003247C1 UniRef100 entry                 339  1e-91
UniRef100_Q6MB14 Probable endopeptidase ATP-binding chain clpC [...   338  2e-91
UniRef100_Q7UPS5 Negative regulator of genetic competence ClpC/M...   329  1e-88
UniRef100_Q8CQ88 Endopeptidase [Staphylococcus epidermidis]           324  4e-87

>UniRef100_Q7U7P3 Endopeptidase Clp ATP-binding chain C [Synechococcus sp.]
          Length = 846

 Score =  385 bits (988), Expect = e-105
 Identities = 215/453 (47%), Positives = 295/453 (64%), Gaps = 42/453 (9%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  TE A KVIM AQ+EAR +GH ++ TE ILLG++G+  G+AAK+LKS G++   +R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V K++GRG   SGF   +I FT  AK VL+ SL+ A+ LG++ + T HLLLGL++   
Sbjct: 61  VEVEKIIGRG---SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   ++++N G D+ K+R QVIR + E        AE S    GG               
Sbjct: 118 GVAARVLENLGVDLAKVRTQVIRMLGET-------AEVSGGGGGG--------------- 155

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                       GA+     + +   L+ FG+NLT++A E KL P VGR  ++ERVIQI+
Sbjct: 156 ------------GAK----GSTKTPTLDEFGSNLTQMANEAKLDPVVGRHNEIERVIQIL 199

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I +GLAQRI  G +P+ L+ K+V+ LD+   +     +G 
Sbjct: 200 GRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDKRVLTLDIGLLVAGTKYRGE 259

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ +++EI+  GNVIL + EVH +  A A  GA   A ILK AL RG +QCI ATT
Sbjct: 260 FEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATT 319

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQPV V EPS+++TIEIL+GLR  YE H++L  TD+ALVAAA 
Sbjct: 320 LDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHHRLKITDDALVAAAT 379

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQLCHAKV 452
           L  +Y+S+RFLPDKAIDLIDEAGS V+L ++K+
Sbjct: 380 LGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKL 412


>UniRef100_Q8YST5 Endopeptidase Clp ATP-binding chain [Anabaena sp.]
          Length = 839

 Score =  379 bits (974), Expect = e-104
 Identities = 213/453 (47%), Positives = 292/453 (64%), Gaps = 46/453 (10%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  TE A KVIM AQ+EAR +GH ++ TE ILLG++G+  G+AAK+LKS G++   +R
Sbjct: 17  MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 76

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V K++GRG   SGF   +I FT  AK VL+ SL+ A+ LG++ + T HLLLGL++   
Sbjct: 77  IEVEKIIGRG---SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGE 133

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   ++++N G D++K+R QVIR + E                        TAE S + Q
Sbjct: 134 GVAARVLENLGVDLSKVRTQVIRMLGE------------------------TAEVSATGQ 169

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                             +   +   L+ FG+NLT++A + KL P VGR +++ERVIQI+
Sbjct: 170 ------------------SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQIL 211

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I +GLA RI +  VP+ L+ K+VV LD+   +     +G 
Sbjct: 212 GRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGE 271

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++ EI   GNVIL + EVH +  A A  GA   A ILK AL RG +QCI ATT
Sbjct: 272 FEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATT 331

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQPV V EPSV+ETIEIL GLR  YE H+KL  +DEALVAAA 
Sbjct: 332 LDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAK 391

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQLCHAKV 452
           LS +Y+S+R+LPDKAIDL+DEAGS V+L ++++
Sbjct: 392 LSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQL 424


>UniRef100_P51332 ATP-dependent Clp protease ATP-binding subunit clpA homolog
           [Porphyra purpurea]
          Length = 821

 Score =  364 bits (935), Expect = 2e-99
 Identities = 208/453 (45%), Positives = 286/453 (62%), Gaps = 43/453 (9%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  TE A KVIM AQ+EAR +GH ++ TE ILLG++G+  G+AA++LKS  ++   +R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDAR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V K++GRG   SGF   +I FT  AK VL+ SL+ A+ LG++ + T HLL+GL++   
Sbjct: 61  VEVEKIIGRG---SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   ++++N   DV+ IR +VI+ + EN                   E NV+  ++   +
Sbjct: 118 GVAARVLENLAVDVSSIRAEVIQMLGEN------------------AEANVSGSNATQAR 159

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
            K P                      LE FG+NLT++A EG L P VGR++++ERVIQI+
Sbjct: 160 SKTP---------------------TLEEFGSNLTQMAIEGGLDPVVGRQKEIERVIQIL 198

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I +GLAQRI +  VP  L+ K V+ LDV   +     +G 
Sbjct: 199 GRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGE 258

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++ EI+   NVIL + EVH +  A A  GA   A +LK AL RG +QCI ATT
Sbjct: 259 FEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATT 318

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           + E+R H+E D  L+R F PV V EPSVEETIEIL GLR  YE H++L  +D AL AAA 
Sbjct: 319 LEEYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAK 378

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQLCHAKV 452
            + QY+S+RFLPDKAIDLIDEAGS V+L ++++
Sbjct: 379 YANQYISDRFLPDKAIDLIDEAGSRVRLLNSQL 411


>UniRef100_Q6B8Z6 Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
           liui]
          Length = 823

 Score =  363 bits (933), Expect = 4e-99
 Identities = 206/453 (45%), Positives = 284/453 (62%), Gaps = 43/453 (9%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  TE A KVIM AQ+EAR +GH ++ TE ILLG++G+  G+AA++LKS  ++   +R
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAQVLKSMNVNLKDAR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V K++GRG   SGF   +I FT  AK VL+ SL+ A+ LG++ + T HLL+GL++   
Sbjct: 61  IEVEKIIGRG---SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   ++++N   +V  IR +VI+                   +G   E N    ++   +
Sbjct: 118 GVAARVLENLAVNVASIRTEVIQ------------------MLGDTTEANTNGNNNTQTR 159

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
            K P                      LE FG+NLT+LA EG L P VGR++++ERVIQI+
Sbjct: 160 SKTP---------------------TLEEFGSNLTELAIEGILDPVVGRQKEIERVIQIL 198

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I +GLAQRI +  +P  L+ K VV LDV   +     +G 
Sbjct: 199 GRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPSILEDKLVVTLDVGLLVAGTKYRGE 258

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++ EI+   N++L + EVH +  A A  GA   A +LK AL RG +QCI ATT
Sbjct: 259 FEERLKRIMDEIKSANNIVLVIDEVHTLIGAGAAEGAIDAANLLKPALARGELQCIGATT 318

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           + E+R H+E D  L+R FQPV V EPSVEETIEIL GLR  YE H++L  +DEAL AAA 
Sbjct: 319 LEEYRKHIEKDAALERRFQPVLVGEPSVEETIEILFGLRDRYEKHHQLKMSDEALAAAAK 378

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQLCHAKV 452
            + QY+S+RFLPDKAIDLIDEAGS V+L ++++
Sbjct: 379 YANQYISDRFLPDKAIDLIDEAGSRVRLLNSQL 411


>UniRef100_Q8R7S1 ATPases with chaperone activity, ATP-binding subunit
           [Thermoanaerobacter tengcongensis]
          Length = 816

 Score =  362 bits (930), Expect = 9e-99
 Identities = 202/448 (45%), Positives = 279/448 (62%), Gaps = 45/448 (10%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M    TE A+K +  AQ+EAR   H Y+ TEHILLG+L +  G+AA++LK  G+ +  +R
Sbjct: 3   MFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYEATR 62

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           E+V+ L+G G          + +T  AK VL+ SL  A+      V T H+LLGLL+   
Sbjct: 63  EKVLSLIGMG----NIPGDVVGYTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGE 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   +++  QG D N++RE++++ + E       PA G              ++ SK+  
Sbjct: 119 GVAVRILMEQGIDFNRVREEIVKMLSEE------PAAG-------------PSKVSKAKN 159

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
              P L Q                     FG +LT LA++GKL P +GRE+++ERVIQI+
Sbjct: 160 TNTPTLNQ---------------------FGRDLTDLARDGKLDPVIGREKEIERVIQIL 198

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I++GLAQ+I+ G VPE LK K+VV LD+A  +     +G 
Sbjct: 199 SRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEVPEILKDKRVVTLDLASLVAGTKYRGE 258

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            E+R++ +I E+   GNVILFV E+H +  A A  GA   + ILK AL RG IQ I ATT
Sbjct: 259 FEDRLKTVINEVIKAGNVILFVDEMHTLIGAGAAEGAIDASNILKPALARGEIQVIGATT 318

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R ++E D  L+R FQP+ V EP+VEETIEILKGLR  YE+H+++  TDEAL AAA 
Sbjct: 319 LDEYRKYVERDPALERRFQPIMVEEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAAK 378

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS +Y+++RFLPDKAIDLIDEA S V+L
Sbjct: 379 LSHRYITDRFLPDKAIDLIDEAASRVRL 406


>UniRef100_Q6ACR4 ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli]
          Length = 839

 Score =  351 bits (900), Expect = 3e-95
 Identities = 193/448 (43%), Positives = 277/448 (61%), Gaps = 40/448 (8%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++V++ AQ+EA+ + H YI TEHILLG++ +  G+AAK L+S GI  +  R
Sbjct: 1   MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           EQV  ++G+G          I FT  AK VL+ SL+ A  LG++ + T H+LLGL++   
Sbjct: 61  EQVQDIIGQG---QQQPTGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q++   GAD+N++R+QVI+ +                  G Q +E V         
Sbjct: 118 GVAAQVLVKLGADLNRVRQQVIQLLS-----------------GYQGKEQV--------- 151

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                      +G      A      L+ FG NLT+ A++ KL P +GRE+++ERV+QI+
Sbjct: 152 ----------QVGGNDQATAQAGSQILDQFGRNLTQAARDNKLDPVIGREKEIERVMQIL 201

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT++++GLAQ I+ G VPE LK K++  LD+   +     +G 
Sbjct: 202 SRRSKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKQLYTLDLGSLIAGSRYRGD 261

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ + KEI   G++I F+ E+H +  A A  GA   A ILK  L RG +Q I ATT
Sbjct: 262 FEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATT 321

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H E D  L+R FQP++V EPS+  TI ILKGLR  YE+H+K+  TD A+V+AAN
Sbjct: 322 LDEYRKHFEKDAALERRFQPIQVNEPSLPHTINILKGLRDRYEAHHKVSITDGAIVSAAN 381

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           L+ +Y+ +RFLPDKAIDLIDEAG+ ++L
Sbjct: 382 LADRYIQDRFLPDKAIDLIDEAGARLRL 409


>UniRef100_Q8FMH5 Putative endopeptidase Clp ATP-binding chain C [Corynebacterium
           efficiens]
          Length = 927

 Score =  350 bits (898), Expect = 5e-95
 Identities = 197/453 (43%), Positives = 292/453 (63%), Gaps = 29/453 (6%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++VI+ AQ+EAR + H YI TEHILLG++ +  G+AAK L+S GI  +  R
Sbjct: 1   MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           ++V +++G G   S  +   I FT  AK VL+ SL+    +G+  + T  LLLGL++   
Sbjct: 61  QEVEEIIGHG---SKPTTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSK-----NQMGGQVEENVTAES 175
           G   Q++   GAD+ ++R+QVI+ +           EG +     +  GGQ  + V A S
Sbjct: 118 GVAAQVLVKLGADLPRVRQQVIQLLSGY--------EGGQGGSPDSPQGGQGGDAVGAGS 169

Query: 176 SKSNQIKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVER 235
           +   +            GA +  N+      L+ FG NLT+ A++GKL P VGR++++ER
Sbjct: 170 APGGRA--------TGSGAGERSNS----LVLDQFGRNLTQAAKDGKLDPVVGRDKEIER 217

Query: 236 VIQIICRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVI 295
           ++Q++ RR KNNP L+GEPGVGKT++++GLA  I++G VPE LK K+V +LD+   +   
Sbjct: 218 IMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGS 277

Query: 296 SNQGSSEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQC 354
             +G  EER++ ++KEI   G++ILF+ E+H +  A A  GA   A +LK  L RG +Q 
Sbjct: 278 RYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQT 337

Query: 355 IFATTVNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEAL 414
           I ATT++E+R H+E D  L+R FQPV+V EPSVE +IEILKGLR  YE+H+++  TD AL
Sbjct: 338 IGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGAL 397

Query: 415 VAAANLSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           VAAA LS +Y+++RFLPDKA+DLIDEAG+ +++
Sbjct: 398 VAAAQLSDRYINDRFLPDKAVDLIDEAGARMRI 430


>UniRef100_Q6NFB1 ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
           diphtheriae]
          Length = 883

 Score =  348 bits (894), Expect = 1e-94
 Identities = 193/448 (43%), Positives = 285/448 (63%), Gaps = 24/448 (5%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++VI+ AQ+EAR + H YI TEHILLG++ +  G+AAK L+S GI     R
Sbjct: 6   MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 65

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           ++V +++G G   S      I FT  AK VL+ SL+    +G+  + T  LLLGL++  +
Sbjct: 66  QEVEEIIGHG---SEPPAGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGD 122

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q++   GAD+ ++R+QVI+ +                  GG+  EN    +++   
Sbjct: 123 GVAAQVLVKLGADLPRVRQQVIQLLS--------------GYEGGESPEN----NNEGEA 164

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
           +           G    + +N     L+ FG NLT+ A+EGKL P VGRE+++ER++Q++
Sbjct: 165 VGAGTGAGRAGRGGGAGERSNSL--VLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVL 222

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT++++GLA  I++G VPE LK K+V +LD+   +     +G 
Sbjct: 223 SRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGD 282

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++KEI   G++ILF+ E+H +  A A  GA   A +LK  L RG +Q I ATT
Sbjct: 283 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATT 342

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQPV+V EPSV+ TIEILKGLR  YE+H+++  TD AL AAA 
Sbjct: 343 LDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQ 402

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS +Y+++RFLPDKA+DLIDEAG+ +++
Sbjct: 403 LSDRYINDRFLPDKAVDLIDEAGARMRI 430


>UniRef100_Q8NMA0 ATPases with chaperone activity, ATP-binding subunit
           [Corynebacterium glutamicum]
          Length = 925

 Score =  347 bits (890), Expect = 4e-94
 Identities = 191/451 (42%), Positives = 288/451 (63%), Gaps = 24/451 (5%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++VI+ AQ+EAR + H YI TEHILLG++ +  G+AAK L+S GI  +  R
Sbjct: 1   MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           ++V +++G+G   S  +   I FT  AK VL+ SL+    +G+  + T  LLLGL++   
Sbjct: 61  QEVEEIIGQG---SQPTTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q++   GAD+ ++R+QVI+ +            G +   GG  E    A +     
Sbjct: 118 GVAAQVLVKLGADLPRVRQQVIQLLS-----------GYEGGQGGSPEGGQGAPTGGD-- 164

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSA---LEIFGTNLTKLAQEGKLHPFVGREEQVERVI 237
                +      G R    +  ++S    L+ FG NLT+ A++GKL P VGR++++ER++
Sbjct: 165 ----AVGAGAAPGGRPSSGSPGERSTSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIM 220

Query: 238 QIICRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISN 297
           Q++ RR KNNP L+GEPGVGKT++++GLA  I++G VPE LK K+V +LD+   +     
Sbjct: 221 QVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRY 280

Query: 298 QGSSEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIF 356
           +G  EER++ ++KEI   G++ILF+ E+H +  A A  GA   A +LK  L RG +Q I 
Sbjct: 281 RGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIG 340

Query: 357 ATTVNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVA 416
           ATT++E+R H+E D  L+R FQPV+V EPSV+ T+EILKGLR  YE+H+++  TD AL A
Sbjct: 341 ATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTVEILKGLRDRYEAHHRVSITDGALTA 400

Query: 417 AANLSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           AA L+ +Y+++RFLPDKA+DLIDEAG+ +++
Sbjct: 401 AAQLADRYINDRFLPDKAVDLIDEAGARMRI 431


>UniRef100_O84288 Probable ATP-dependent Clp protease ATP-binding subunit [Chlamydia
           trachomatis]
          Length = 854

 Score =  347 bits (889), Expect = 5e-94
 Identities = 194/448 (43%), Positives = 284/448 (63%), Gaps = 19/448 (4%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T  AK+VI  A+KEA+ + H Y+ TEHILLG+L    G+A  +L++ G+DF+ ++
Sbjct: 1   MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAK 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V +L+G G       C D   T   K   + + + A  L ++ V T HLLLG+L  S+
Sbjct: 61  HEVERLIGYGPEIQ--VCGDPALTGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSD 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++N   D  +IR+++++++E     + LP   S               SS S++
Sbjct: 119 GVALQVLENLHVDPKEIRKEILKELE--TFNLQLPPSSSITPRN--------TNSSSSSK 168

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
              P+    + LG  K +      SAL+ +G +LT++ +E +L P +GR  +VER+I I+
Sbjct: 169 SSSPL--GGHTLGGDKPEKL----SALKAYGYDLTEMFKESRLDPVIGRSAEVERLILIL 222

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
           CRR KNNP LVGE GVGKT+I++GLAQ+I+SG VPE L+ K+++ LD+A  +     +G 
Sbjct: 223 CRRRKNNPVLVGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQ 282

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EERI+ ++ E+   GN++LF+ E+H I  A A  GA   ++ILK AL RG IQCI ATT
Sbjct: 283 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATT 342

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQ + V  PSV+ET+EIL+GL+  YE H+ +  TDEALVAAA 
Sbjct: 343 LDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAK 402

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS QYV  RFLPDKAIDL+DEAG+ V++
Sbjct: 403 LSDQYVHGRFLPDKAIDLLDEAGARVRV 430


>UniRef100_Q823Q2 ATP-dependent Clp protease, ATP-binding subunit [Chlamydophila
           caviae]
          Length = 846

 Score =  345 bits (884), Expect = 2e-93
 Identities = 191/448 (42%), Positives = 285/448 (62%), Gaps = 22/448 (4%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T  AK+VI  A+KEA+ + H Y+ TEHILLG+L    G+A  +L++ G+DF+ ++
Sbjct: 1   MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGVDFDTAK 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           ++V +L+G G     +   D   T   K   + + + A  L ++ V T HLLLG+L  ++
Sbjct: 61  QEVERLIGYGPEIQVYG--DPALTGRVKKSFESANEEAGVLEHNYVGTEHLLLGILNQAD 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++N   D  ++R+++++++E     + LP   S N  G       ++ SSKS+ 
Sbjct: 119 GVALQVLENLHIDPREVRKEILKELE--TFNLQLPPSSSSNPRGS------SSSSSKSSS 170

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
           +        + LG  K D      SAL+ +G +LT++ +E KL P +GR  +VER+I I+
Sbjct: 171 L-------GHALGGEKSDKL----SALKAYGYDLTEMFRESKLDPVIGRSAEVERLILIL 219

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
           CRR KNNP L+GE GVGKT+I++GLAQ+I+S  VP+ L+ K+++ LD+A  +     +G 
Sbjct: 220 CRRRKNNPVLIGEAGVGKTAIVEGLAQKIISNEVPDTLRKKRLITLDLALMIAGTKYRGQ 279

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EERI+ ++ E+   GN++LF+ E+H I  A A  GA   + ILK AL RG IQCI ATT
Sbjct: 280 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEIQCIGATT 339

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQ + V  PSV+ETIEIL+GL+  YE H+ +  T+EAL AAA 
Sbjct: 340 IDEYRKHIEKDAALERRFQKIIVQPPSVDETIEILRGLKKKYEEHHNVAITEEALKAAAT 399

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS QYV  RFLPDKAIDL+DEAG+ V++
Sbjct: 400 LSDQYVHGRFLPDKAIDLLDEAGARVRV 427


>UniRef100_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit [Chlamydia
           muridarum]
          Length = 870

 Score =  345 bits (884), Expect = 2e-93
 Identities = 191/448 (42%), Positives = 287/448 (63%), Gaps = 18/448 (4%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T  AK+VI  A+KEA+ + H Y+ TEHILLG+L    G+A  +L++ G+DF+ ++
Sbjct: 17  MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAK 76

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V +L+G G     +   D   T   K   + + + A  L ++ V T HLLLG+L  ++
Sbjct: 77  NEVERLIGYGPEIQVYG--DPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQAD 134

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++N   D  +IR+++++++E     + LP   S          + ++ SSKS+ 
Sbjct: 135 GVALQVLENLHIDPKEIRKEILKELE--TFNLQLPPSSSITPRN---TNSSSSSSSKSSS 189

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
           +        ++LG  K +      SAL+ +G +LT++ +E +L P +GR  +VER+I I+
Sbjct: 190 LG------GHSLGGDKPEKL----SALKAYGYDLTEMFKEARLDPVIGRSAEVERLILIL 239

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
           CRR KNNP L+GE GVGKT+I++GLAQ+I+SG VPE L+ K+++ LD+A  +     +G 
Sbjct: 240 CRRRKNNPVLIGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQ 299

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EERI+ ++ E+   GN++LF+ E+H I  A A  GA   ++ILK AL RG IQCI ATT
Sbjct: 300 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATT 359

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQ + V  PSV+ET+EIL+GL+  YE H+ +  TDEALVAAA 
Sbjct: 360 LDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAK 419

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS QYV  RFLPDKAIDL+DEAG+ V++
Sbjct: 420 LSDQYVHGRFLPDKAIDLLDEAGARVRV 447


>UniRef100_Q83H06 ATP-dependent Clp protease ATP-binding subunit [Tropheryma
           whipplei]
          Length = 840

 Score =  341 bits (875), Expect = 2e-92
 Identities = 187/448 (41%), Positives = 283/448 (62%), Gaps = 41/448 (9%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++VI+ AQ+EAR + H YI TEH+LLG++ + +G+AA+ L+S  I    +R
Sbjct: 5   MFERFTDKARRVIVLAQEEARTLSHNYIGTEHVLLGLISEGDGIAAQALESLDITLERAR 64

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           E V +L+GRG   +      I FT  AK VL+ SL+ A  LG++ + T H+LLG+L    
Sbjct: 65  EGVAELIGRGQNATS---GHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGILHEGE 121

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q++ N GA++  I+++V+  +E+                 G+ +E V+   S+S +
Sbjct: 122 GIAAQVLVNMGAELPAIQQRVMHLLED-----------------GREQEPVSVGPSESGK 164

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
           I                         L+ FG +LT+ A+EGKL P +GRE+++ERV+Q++
Sbjct: 165 IS--------------------GSQILDQFGRHLTRAAKEGKLDPVIGREKEIERVMQVL 204

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT++++ LAQ I++G VP  L+ K+V +LD+   +     +G 
Sbjct: 205 SRRTKNNPILIGEPGVGKTAVVEALAQAIVNGDVPVNLRNKQVYSLDLGSLIAGSRYRGD 264

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDAATS-GARSFAYILKHALERGVIQCIFATT 359
            EER++ + KEI   G++I+F+ E+H +  A ++ GA   A ILK  L RG +Q I ATT
Sbjct: 265 FEERLKKVTKEIRSRGDIIVFIDEIHSLVGAGSAEGAIDAATILKPLLARGELQTIGATT 324

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R ++E D+ L+R FQPV V EPS+   I+ILKGLR  YE+H+K+  TDEA+ AA  
Sbjct: 325 LDEYRKNIEKDSALERRFQPVNVSEPSIPMCIQILKGLRDRYEAHHKVKITDEAIYAAVT 384

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS +Y+++RFLPDKAIDLIDEAG+ ++L
Sbjct: 385 LSSRYINDRFLPDKAIDLIDEAGARLRL 412


>UniRef100_Q9Z8A6 Probable ATP-dependent Clp protease ATP-binding subunit [Chlamydia
           pneumoniae]
          Length = 845

 Score =  341 bits (875), Expect = 2e-92
 Identities = 189/448 (42%), Positives = 283/448 (62%), Gaps = 21/448 (4%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T  AK+VI  A+KEA+ + H Y+ TEHILLG+L    G+A  +L++ GIDF+ +R
Sbjct: 1   MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTAR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           ++V +L+G G     +   D   T   K   + + + A  L ++ V T HLLLG+L  S+
Sbjct: 61  QEVERLIGYGPEIQVYG--DPALTGRVKKSFESANEEASLLEHNYVGTEHLLLGILHQSD 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
               Q+++N   D  ++R+++++++E     + LP   S +           + SS+SN 
Sbjct: 119 SVALQVLENLHIDPREVRKEILKELE--TFNLQLPPSSSSS-----------SSSSRSNP 165

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                 +  + LG     + N++ SAL+ +G +LT++ +E KL P +GR  +VER+I I+
Sbjct: 166 S-----SSKSPLGHSLGSDKNEKLSALKAYGYDLTEMVRESKLDPVIGRSSEVERLILIL 220

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
           CRR KNNP L+GE GVGKT+I++GLAQ+I+   VP+ L+ K+++ LD+A  +     +G 
Sbjct: 221 CRRRKNNPVLIGEAGVGKTAIVEGLAQKIILNEVPDALRKKRLITLDLALMIAGTKYRGQ 280

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EERI+ ++ E+   GN++LF+ E+H I  A A  GA   + ILK AL RG IQCI ATT
Sbjct: 281 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEIQCIGATT 340

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQ + V  PSV+ETIEIL+GL+  YE H+ +  T+EAL AAA 
Sbjct: 341 IDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAAT 400

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS QYV  RFLPDKAIDL+DEAG+ V++
Sbjct: 401 LSDQYVHGRFLPDKAIDLLDEAGARVRV 428


>UniRef100_UPI00003113CE UPI00003113CE UniRef100 entry
          Length = 826

 Score =  341 bits (874), Expect = 3e-92
 Identities = 183/448 (40%), Positives = 281/448 (61%), Gaps = 37/448 (8%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++V++ AQ+EAR + H YI TEHILLG++ +  G AAK L+   I+ +  R
Sbjct: 1   MFERFTDRARRVVVLAQEEARRLNHNYIGTEHILLGLIQEGEGHAAKALEELNINIDSVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V++++G G          I FT  AK VL+ SL+ A  LG++ + T H+LLGL++   
Sbjct: 61  SEVVEIIGEGQQSPS---GHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++  GA+++++R+ VI+ I  +        EG K Q                  
Sbjct: 118 GVAAQVLKKLGAELSQVRQTVIKLISNS-------DEGKKPQAA---------------- 154

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                     + G R+   +    + L+ FG NLT++A+EGKL P +GR  ++ERV+QI+
Sbjct: 155 ----------STGGRERPGSGTGSAILDQFGRNLTRMAKEGKLDPVIGRTTEIERVMQIL 204

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I++GLAQ+I+SG +P  L+GK++  LD++  +     +G 
Sbjct: 205 SRRTKNNPVLIGEPGVGKTAIVEGLAQKIISGDIPSTLQGKQIYTLDLSALVAGSRYRGD 264

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++KEI+  G+++LF+ E+H +  A A  GA   A ILK  L RG +Q + ATT
Sbjct: 265 FEERLKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGATT 324

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           + E R H E D  L+R FQ V+V EP++ + IEIL GL+  YE H+ + +TD+A+V+A N
Sbjct: 325 LEEFRKHFEKDAALERRFQSVQVDEPNLSDAIEILDGLKDRYEVHHGVRFTDQAIVSAVN 384

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           ++ +Y+S+RFLPDKAIDLIDEAGS +++
Sbjct: 385 MADRYISDRFLPDKAIDLIDEAGSRMRV 412


>UniRef100_Q8G871 Protease [Bifidobacterium longum]
          Length = 869

 Score =  340 bits (873), Expect = 4e-92
 Identities = 188/448 (41%), Positives = 278/448 (61%), Gaps = 33/448 (7%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++VI+ AQ+EAR + H YI TEH+LLG++ +  G+AAK L S G++ + +R
Sbjct: 1   MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
           +QV +++G+G          I FT  AK VL+FSL+ A  LG+  + T H+LLGL++   
Sbjct: 61  KQVEEMIGKGNAAPN---GHIPFTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G  TQ++     D+ ++R   I  I  N        +G     GG     VT + +KS  
Sbjct: 118 GVGTQVLIKMDVDLGELRSATIDMIRGNSGTGTGDGKGDLANAGG-----VTDKQNKSG- 171

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                                   + L+ FG NLT  A EGKL P +GR  ++ERV+ ++
Sbjct: 172 -----------------------SAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVL 208

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT++++GLAQ+I +G VPE LKGK+V +LD+   +     +G 
Sbjct: 209 SRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVAGSRYRGD 268

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDAATS-GARSFAYILKHALERGVIQCIFATT 359
            EER++ ++KEI+  G+++LF+ E+H I  A ++ GA   + +LK  L RG +Q I ATT
Sbjct: 269 FEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATT 328

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
            +E+R ++E D  L+R FQP++V EP++ ETIEILKGLR  YE+H+ +  TD AL +AA 
Sbjct: 329 TDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAE 388

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS +Y+ +R LPDKAIDLIDEAG+ +++
Sbjct: 389 LSSRYIQDRNLPDKAIDLIDEAGARLRI 416


>UniRef100_UPI00003247C1 UPI00003247C1 UniRef100 entry
          Length = 826

 Score =  339 bits (869), Expect = 1e-91
 Identities = 184/448 (41%), Positives = 280/448 (62%), Gaps = 37/448 (8%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A++V++ AQ+EAR + H YI TEHILLG++ +  G AAK L    I+ +  R
Sbjct: 1   MFERFTDRARRVVVLAQEEARRLNHNYIGTEHILLGLIQEGEGHAAKALDELNINIDSVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V++++G G          I FT  AK VL+ SL+ A  LG++ + T H+LLGL++   
Sbjct: 61  SEVVEIIGEGQQSPS---GHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGE 117

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++  GA+++++R+ VI+ I  +                         ES K   
Sbjct: 118 GVAAQVLKKLGAELSQVRQTVIKLISSS------------------------GESKKQ-- 151

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
                  Q+ + G R+   ++   + L+ FG NLT++A+EGKL P +GR  ++ERV+QI+
Sbjct: 152 -------QSASTGGRERPGSSTGSAILDQFGRNLTRMAKEGKLDPVIGRTTEIERVMQIL 204

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
            RR KNNP L+GEPGVGKT+I++GLAQ+I+SG VP  L+GK++  LD++  +     +G 
Sbjct: 205 SRRTKNNPVLIGEPGVGKTAIVEGLAQKIVSGDVPVTLEGKQIYTLDLSALVAGSRYRGD 264

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EER++ ++KEI+  G+++LF+ E+H +  A A  GA   A ILK  L RG +Q I ATT
Sbjct: 265 FEERLKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 324

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           + E R H E D  L+R FQ V+V EP + + IEIL GL+  YE H+ + +TD+A+ +A N
Sbjct: 325 LEEFRKHFEKDAALERRFQSVQVDEPKLSDAIEILDGLKDRYEVHHGVRFTDQAIASAVN 384

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           ++ +Y+S+RFLPDKAIDLIDEAGS +++
Sbjct: 385 MADRYISDRFLPDKAIDLIDEAGSRMRV 412


>UniRef100_Q6MB14 Probable endopeptidase ATP-binding chain clpC [Parachlamydia sp.]
          Length = 847

 Score =  338 bits (866), Expect = 2e-91
 Identities = 189/448 (42%), Positives = 282/448 (62%), Gaps = 20/448 (4%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M +  T  AK+VI  A+KEA+ + H Y+ TEH+LLG+L    G+A  +L++  IDF   R
Sbjct: 1   MFDKFTNRAKQVIKLAKKEAQRLNHNYLGTEHVLLGLLKLGQGVAVNVLRNLNIDFETVR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V KLVG G     +   D   T   K V +F+ + A +L ++ V T HLLLGLL+ ++
Sbjct: 61  SEVEKLVGYGPEIQVYG--DPALTGKVKKVFEFANEEAANLNHNYVGTEHLLLGLLRQTD 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQ 180
           G   Q+++N   ++ ++R++V++++E    Q+  P  G+    G            K + 
Sbjct: 119 GVAAQVLENLNVNLKEVRKEVLKELETFNLQLP-PISGA----GISPSNPSPGSGGKGSY 173

Query: 181 IKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQII 240
            K    T            AN +  AL  +G +LT++ +EGK+ P +GR+E++ER+I I+
Sbjct: 174 EKVAAGT------------ANDKMPALRAYGHDLTEMCREGKMDPVIGRKEEIERLILIL 221

Query: 241 CRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGS 300
           CRR KNNP LVGE GVGKT+I++GLAQ I+ G VP+ L+ KK++ LD+A  +     +G 
Sbjct: 222 CRRRKNNPVLVGEAGVGKTAIVEGLAQAIVKGDVPDTLRKKKLITLDLALMIAGTKYRGQ 281

Query: 301 SEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATT 359
            EERI+ ++ EI+  GNV+LF+ E+H I  A A  GA   + ILK AL RG +QCI ATT
Sbjct: 282 FEERIKAVMDEIKKNGNVLLFIDELHTIVGAGAAEGAIDASNILKPALSRGELQCIGATT 341

Query: 360 VNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAAN 419
           ++E+R H+E D  L+R FQ + V  PSV++TIEIL GL+  YE H+K+ +T++A+ AAA 
Sbjct: 342 IDEYRKHIEKDAALERRFQKILVAPPSVDDTIEILYGLKPEYEKHHKVIFTNQAIRAAAV 401

Query: 420 LSQQYVSERFLPDKAIDLIDEAGSHVQL 447
           LS +Y+  RFLPDKAIDLIDEAG+ +++
Sbjct: 402 LSDRYIHGRFLPDKAIDLIDEAGAKLRI 429


>UniRef100_Q7UPS5 Negative regulator of genetic competence ClpC/MecB [Rhodopirellula
           baltica]
          Length = 859

 Score =  329 bits (843), Expect = 1e-88
 Identities = 187/449 (41%), Positives = 274/449 (60%), Gaps = 28/449 (6%)

Query: 1   MLENLTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSR 60
           M E  T+ A+KV+  A +EA+   H+YI TEHILLG++ + +G+AA +LK+  +D    R
Sbjct: 1   MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIR 60

Query: 61  EQVMKLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSN 120
            +V KLV  G      +   +  T  AK V+++S++ A++L +  V T H+LLGLL+   
Sbjct: 61  LEVEKLVQSGPEM--VTVGKLPQTPRAKKVIEYSMEEARNLNHSYVGTEHILLGLLREQE 118

Query: 121 GTVTQLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAE-SSKSN 179
           G   Q++ N G  +  +RE+V+  +   +    +   G +   GG  E +     SSKS 
Sbjct: 119 GVAAQVLMNLGLKLEDVREEVLNLLGHGLEGAEVGERGGR---GGDGEGSSGGSGSSKSG 175

Query: 180 QIKFPVLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQI 239
           + K P                     AL+ FG +LT+LA++G+L P +GRE ++ER IQI
Sbjct: 176 KSKTP---------------------ALDSFGRDLTELAKKGELDPVIGREREIERAIQI 214

Query: 240 ICRRMKNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQG 299
           +CRR KNNP L+GE GVGKT+II+G AQR++ G VPE L  K++V LD+A  +     +G
Sbjct: 215 LCRRTKNNPVLLGEAGVGKTAIIEGFAQRVVGGEVPEILAEKRIVVLDLAMMVAGTKYRG 274

Query: 300 SSEERIRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFAT 358
             EERI+ ++ E+    N ILF+ E+H +  A    GA   A +LK AL RG IQCI AT
Sbjct: 275 QFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVLKPALARGEIQCIGAT 334

Query: 359 TVNEHRMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAA 418
           T++E+R ++E D  L R FQ + V      ETIEILKGLR  YE H+++ +TD+A+VAA 
Sbjct: 335 TLDEYRKYIEKDNALARRFQEIMVEPTGKTETIEILKGLRERYEEHHRVQFTDDAVVAAV 394

Query: 419 NLSQQYVSERFLPDKAIDLIDEAGSHVQL 447
            +S++Y++ R LPDKAID+IDEAG+ V+L
Sbjct: 395 EMSERYITARCLPDKAIDVIDEAGARVRL 423


>UniRef100_Q8CQ88 Endopeptidase [Staphylococcus epidermidis]
          Length = 817

 Score =  324 bits (830), Expect = 4e-87
 Identities = 185/444 (41%), Positives = 273/444 (60%), Gaps = 46/444 (10%)

Query: 5   LTECAKKVIMAAQKEARFVGHKYISTEHILLGILGDSNGLAAKILKSYGIDFNVSREQVM 64
           LTE A++V+  AQ+EA  + H  I TEH+LLG++ +  G+AAK+L S+ I  +   E+V 
Sbjct: 6   LTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLVSFNITEDKVIEEVE 65

Query: 65  KLVGRGGGCSGFSCKDIRFTFDAKNVLDFSLKHAKSLGYDNVDTMHLLLGLLQGSNGTVT 124
           KL+G G    G     + +T  AK V++ S+  A+ L ++ V T H+LLGL++ + G   
Sbjct: 66  KLIGHGQEQMG----TLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAA 121

Query: 125 QLIQNQGADVNKIREQVIRQIEENVHQVNLPAEGSKNQMGGQVEENVTAESSKSNQIKFP 184
           ++  N   ++ K R QV++                   +G     N  A+++KSN     
Sbjct: 122 RVFANLDLNITKARAQVVK------------------ALGSPEMSNKNAQANKSN----- 158

Query: 185 VLTQNNNLGARKDDNANKQKSALEIFGTNLTKLAQEGKLHPFVGREEQVERVIQIICRRM 244
                                 L+    +LT +A++G L P VGR++++ RVI+++ RR 
Sbjct: 159 ------------------NTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRT 200

Query: 245 KNNPCLVGEPGVGKTSIIQGLAQRILSGSVPEKLKGKKVVALDVADFLYVISNQGSSEER 304
           KNNP L+GEPGVGKT+I +GLAQ I+   VPE LK K+V++LD+   +     +G  EER
Sbjct: 201 KNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEER 260

Query: 305 IRCLIKEIELCGNVILFVKEVHHIFDA-ATSGARSFAYILKHALERGVIQCIFATTVNEH 363
           ++ +++EI   GNVILF+ E+H +  A    GA   + ILK AL RG +QCI ATT++E+
Sbjct: 261 LKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY 320

Query: 364 RMHMENDTTLKRIFQPVKVVEPSVEETIEILKGLRGTYESHYKLHYTDEALVAAANLSQQ 423
           R ++E D  L+R FQP++V EP+VE+TIEILKGLR  YE+H++++ +DEAL AAA LS +
Sbjct: 321 RKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDR 380

Query: 424 YVSERFLPDKAIDLIDEAGSHVQL 447
           YVS+RFLPDKAIDLIDEA S V+L
Sbjct: 381 YVSDRFLPDKAIDLIDEASSKVRL 404


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.318    0.135    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 717,533,566
Number of Sequences: 2790947
Number of extensions: 29992633
Number of successful extensions: 112905
Number of sequences better than 10.0: 1301
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 109310
Number of HSP's gapped (non-prelim): 2098
length of query: 455
length of database: 848,049,833
effective HSP length: 131
effective length of query: 324
effective length of database: 482,435,776
effective search space: 156309191424
effective search space used: 156309191424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)