
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146749.13 - phase: 0 /pseudo
(68 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8RWI7 Hypothetical protein At3g14860 [Arabidopsis tha... 37 0.13
UniRef100_Q9LH69 Arabidopsis thaliana genomic DNA, chromosome 3,... 37 0.13
UniRef100_UPI000034B35A UPI000034B35A UniRef100 entry 31 7.1
>UniRef100_Q8RWI7 Hypothetical protein At3g14860 [Arabidopsis thaliana]
Length = 492
Score = 37.0 bits (84), Expect = 0.13
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 26 TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
TKEE GWPSF Q++ DL KL+LE TS ++ +F +N
Sbjct: 307 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 343
>UniRef100_Q9LH69 Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2
[Arabidopsis thaliana]
Length = 511
Score = 37.0 bits (84), Expect = 0.13
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 26 TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
TKEE GWPSF Q++ DL KL+LE TS ++ +F +N
Sbjct: 326 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 362
>UniRef100_UPI000034B35A UPI000034B35A UniRef100 entry
Length = 295
Score = 31.2 bits (69), Expect = 7.1
Identities = 15/49 (30%), Positives = 28/49 (56%), Gaps = 2/49 (4%)
Query: 14 ASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIA 62
AS K++STL + + WP F +++D+L + L + ++KF +A
Sbjct: 179 ASKSKNRSTLNQMISK--WPFFYEMMDMLDMVLTKTDQRVIKFYEECLA 225
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.310 0.126 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,644,097
Number of Sequences: 2790947
Number of extensions: 2536486
Number of successful extensions: 7094
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7094
Number of HSP's gapped (non-prelim): 3
length of query: 68
length of database: 848,049,833
effective HSP length: 44
effective length of query: 24
effective length of database: 725,248,165
effective search space: 17405955960
effective search space used: 17405955960
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146749.13