BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146743.2 - phase: 0
(68 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis tha... 99 2e-20
UniRef100_Q9C8B0 Hypothetical protein F10O5.11 [Arabidopsis thal... 99 4e-20
UniRef100_Q9C8V4 Hypothetical protein T22A15.15 [Arabidopsis tha... 99 4e-20
UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thal... 97 1e-19
UniRef100_Q9LW42 Helicase-like protein [Arabidopsis thaliana] 97 1e-19
UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa] 97 1e-19
UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana] 94 7e-19
UniRef100_Q9LIZ9 Similar to Arabidopsis thaliana chromosome II B... 93 2e-18
UniRef100_Q84QR0 Helicase-like protein [Oryza sativa] 92 3e-18
UniRef100_O82606 T2L5.8 protein [Arabidopsis thaliana] 92 3e-18
UniRef100_Q6YTQ6 Helicase-like protein [Oryza sativa] 89 4e-17
UniRef100_Q6YSD5 Helicase-like protein [Oryza sativa] 89 4e-17
UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sat... 88 5e-17
UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana] 87 1e-16
UniRef100_Q94LS7 Putative helicase [Oryza sativa] 87 1e-16
UniRef100_Q7XDN7 Hypothetical protein [Oryza sativa] 86 2e-16
UniRef100_Q94LS3 Putative helicase [Oryza sativa] 86 2e-16
UniRef100_Q5W673 Putative helicase [Oryza sativa] 85 4e-16
UniRef100_Q65XV4 Hypothetical protein P0016H04.14 [Oryza sativa] 85 4e-16
UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana] 85 4e-16
>UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis thaliana]
Length = 1308
Score = 99.4 bits (246), Expect = 2e-20
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSL HVG+YLP P+FSHGQLYVA+SRV SR GLKILI D++ + +NVV
Sbjct: 1234 MTINKSQGQSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIIDEEGNRGKTTTNVV 1293
Query: 61 YREVFRNL 68
++EVF+NL
Sbjct: 1294 FKEVFQNL 1301
>UniRef100_Q9C8B0 Hypothetical protein F10O5.11 [Arabidopsis thaliana]
Length = 1678
Score = 98.6 bits (244), Expect = 4e-20
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSLEH+G+YLP P+FSHGQLYVA+SRVTS+ GLKILI D D +NVV
Sbjct: 1610 MTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVV 1669
Query: 61 YREVFRNL 68
++EVF+N+
Sbjct: 1670 FKEVFQNI 1677
>UniRef100_Q9C8V4 Hypothetical protein T22A15.15 [Arabidopsis thaliana]
Length = 729
Score = 98.6 bits (244), Expect = 4e-20
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSLEH+G+YLP P+FSHGQLYVA+SRVTS+ GLKILI D D +NVV
Sbjct: 661 MTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVV 720
Query: 61 YREVFRNL 68
++EVF+N+
Sbjct: 721 FKEVFQNI 728
>UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thaliana]
Length = 1752
Score = 97.1 bits (240), Expect = 1e-19
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSLE VG+YLP P+FSHGQLYVA+SRVTS+ GLKILI D D + +NVV
Sbjct: 1684 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVV 1743
Query: 61 YREVFRNL 68
++EVF+N+
Sbjct: 1744 FKEVFQNI 1751
>UniRef100_Q9LW42 Helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 97.1 bits (240), Expect = 1e-19
Identities = 45/68 (66%), Positives = 56/68 (82%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSL +VG+YLP P+FSHGQLYVA+SRV S+GGLK+LI D + +NVV
Sbjct: 1602 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVV 1661
Query: 61 YREVFRNL 68
++E+FRNL
Sbjct: 1662 FKEIFRNL 1669
>UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa]
Length = 2052
Score = 96.7 bits (239), Expect = 1e-19
Identities = 46/68 (67%), Positives = 53/68 (77%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L HVGVYL P+F+HGQLYV ISR TSR GLKILI DD++ SNVV
Sbjct: 1351 MTINKSQGQTLSHVGVYLKKPVFTHGQLYVVISRATSRSGLKILIEDDNESCASETSNVV 1410
Query: 61 YREVFRNL 68
Y E+ R+L
Sbjct: 1411 YHEILRSL 1418
>UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 94.4 bits (233), Expect = 7e-19
Identities = 46/68 (67%), Positives = 56/68 (81%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSLE VG+YLP P+FSHGQLYVA+SRVTS+ GLKILI D + +NVV
Sbjct: 1361 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVV 1420
Query: 61 YREVFRNL 68
++EVF+N+
Sbjct: 1421 FKEVFQNI 1428
>UniRef100_Q9LIZ9 Similar to Arabidopsis thaliana chromosome II BAC T13P21 [Oryza
sativa]
Length = 1270
Score = 92.8 bits (229), Expect = 2e-18
Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
+TINKSQGQ+L VGVYLPSP+FSHGQLYVA+SRVTS GL+ILI + +++ NVV
Sbjct: 1196 LTINKSQGQTLSRVGVYLPSPVFSHGQLYVALSRVTSPDGLRILIENSPTEHVTSTHNVV 1255
Query: 61 YREVFRNL 68
Y+E+F +L
Sbjct: 1256 YKEIFNDL 1263
>UniRef100_Q84QR0 Helicase-like protein [Oryza sativa]
Length = 1330
Score = 92.4 bits (228), Expect = 3e-18
Identities = 44/65 (67%), Positives = 51/65 (77%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L+ VG YLPSP+FSHGQLYVA+SRVTS GL+ILIN + N NVV
Sbjct: 1258 MTINKSQGQTLQKVGAYLPSPVFSHGQLYVALSRVTSPKGLRILINSNSSSNEHCTQNVV 1317
Query: 61 YREVF 65
Y E+F
Sbjct: 1318 YHEIF 1322
>UniRef100_O82606 T2L5.8 protein [Arabidopsis thaliana]
Length = 1073
Score = 92.0 bits (227), Expect = 3e-18
Identities = 45/68 (66%), Positives = 54/68 (79%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTIN SQGQSLEHVG+YLP +FSHGQLYVA+SRVTS+ GLK LI D D +NVV
Sbjct: 1005 MTINTSQGQSLEHVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVV 1064
Query: 61 YREVFRNL 68
++EVF+N+
Sbjct: 1065 FKEVFQNI 1072
>UniRef100_Q6YTQ6 Helicase-like protein [Oryza sativa]
Length = 1430
Score = 88.6 bits (218), Expect = 4e-17
Identities = 44/64 (68%), Positives = 50/64 (77%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L+ VGVYL P+F+HGQLYVAISRVTSR GLKILI +DD N+V
Sbjct: 1324 MTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIV 1383
Query: 61 YREV 64
Y EV
Sbjct: 1384 YSEV 1387
>UniRef100_Q6YSD5 Helicase-like protein [Oryza sativa]
Length = 1516
Score = 88.6 bits (218), Expect = 4e-17
Identities = 44/64 (68%), Positives = 50/64 (77%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L+ VGVYL P+F+HGQLYVAISRVTSR GLKILI +DD N+V
Sbjct: 1410 MTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIV 1469
Query: 61 YREV 64
Y EV
Sbjct: 1470 YSEV 1473
>UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sativa]
Length = 807
Score = 88.2 bits (217), Expect = 5e-17
Identities = 44/65 (67%), Positives = 49/65 (74%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L VGVYLPSP+FSHGQLYVA SRVTS GLK+LI + + NVV
Sbjct: 735 MTINKSQGQTLSRVGVYLPSPVFSHGQLYVAFSRVTSPNGLKVLIENSPASYENCTHNVV 794
Query: 61 YREVF 65
Y EVF
Sbjct: 795 YSEVF 799
>UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana]
Length = 1241
Score = 87.0 bits (214), Expect = 1e-16
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
M I KSQGQSL+ V +YLP P+FSHGQLYVA+SRVTS+ GLK+LI D + + NVV
Sbjct: 1172 MRIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVV 1231
Query: 61 YREVFRNL 68
++E+F+NL
Sbjct: 1232 FKEIFQNL 1239
>UniRef100_Q94LS7 Putative helicase [Oryza sativa]
Length = 1573
Score = 86.7 bits (213), Expect = 1e-16
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L VG+YLP +F+HGQLYVA+SRVTSR GLKI+I D + + N+V
Sbjct: 1508 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKIMIADKECPGEGMVKNIV 1567
Query: 61 YREVFR 66
Y+E+F+
Sbjct: 1568 YKEIFQ 1573
>UniRef100_Q7XDN7 Hypothetical protein [Oryza sativa]
Length = 1477
Score = 86.3 bits (212), Expect = 2e-16
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L VG+YLP +F+HGQLYVA+SRVTSR GLKILI D++ + N+V
Sbjct: 1412 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKILIADEECPGEGMVKNIV 1471
Query: 61 YREVFR 66
Y+E+ +
Sbjct: 1472 YKEILQ 1477
>UniRef100_Q94LS3 Putative helicase [Oryza sativa]
Length = 1501
Score = 86.3 bits (212), Expect = 2e-16
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQ+L VG+YLP +F+HGQLYVA+SRVTSR GLKILI D++ + N+V
Sbjct: 1436 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKILIADEECPGEGMVKNIV 1495
Query: 61 YREVFR 66
Y+E+ +
Sbjct: 1496 YKEILQ 1501
>UniRef100_Q5W673 Putative helicase [Oryza sativa]
Length = 1634
Score = 85.1 bits (209), Expect = 4e-16
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSL VG+YLP +F+HGQLYVA SRVT R GL+I+++D++ + N+V
Sbjct: 1570 MTINKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIV 1629
Query: 61 YREVF 65
Y+E+F
Sbjct: 1630 YKEIF 1634
>UniRef100_Q65XV4 Hypothetical protein P0016H04.14 [Oryza sativa]
Length = 1525
Score = 85.1 bits (209), Expect = 4e-16
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDDDDNIDVASNVV 60
MTINKSQGQSL VG+YLP +F+HGQLYVA SRVT R GL+I+++D++ + N+V
Sbjct: 1461 MTINKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIV 1520
Query: 61 YREVF 65
Y+E+F
Sbjct: 1521 YKEIF 1525
>UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana]
Length = 1265
Score = 85.1 bits (209), Expect = 4e-16
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 1 MTINKSQGQSLEHVGVYLPSPIFSHGQLYVAISRVTSRGGLKILINDDD 49
MTINKS+GQSLEHVG+YLP P+FSHGQLYVA+SRVTS+ GLKILI D D
Sbjct: 1214 MTINKSEGQSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKD 1262
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.319 0.138 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,316,111
Number of Sequences: 2790947
Number of extensions: 3536387
Number of successful extensions: 10603
Number of sequences better than 10.0: 247
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 10416
Number of HSP's gapped (non-prelim): 253
length of query: 68
length of database: 848,049,833
effective HSP length: 44
effective length of query: 24
effective length of database: 725,248,165
effective search space: 17405955960
effective search space used: 17405955960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146743.2