BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146719.4 - phase: 0 /pseudo
(471 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5W6A4 Putative polyprotein [Oryza sativa] 152 2e-35
UniRef100_Q7XS19 OSJNBa0080E14.17 protein [Oryza sativa] 152 3e-35
UniRef100_Q8LSS7 Putative polyprotein [Oryza sativa] 151 4e-35
UniRef100_Q7XRP7 OSJNBb0080H08.11 protein [Oryza sativa] 150 8e-35
UniRef100_Q7XLC0 OSJNBa0011K22.9 protein [Oryza sativa] 150 8e-35
UniRef100_Q6I552 Putative polyprotein [Oryza sativa] 150 8e-35
UniRef100_Q7XG24 Putative retroelement [Oryza sativa] 150 1e-34
UniRef100_Q6F2Y4 Putative polyprotein [Oryza sativa] 150 1e-34
UniRef100_Q8S5K5 Putative retroelement [Oryza sativa] 149 1e-34
UniRef100_Q8S678 Putative polyprotein [Oryza sativa] 149 2e-34
UniRef100_Q60DI3 Putative polyprotein [Oryza sativa] 149 2e-34
UniRef100_Q7XLR3 OSJNBb0093G06.8 protein [Oryza sativa] 149 2e-34
UniRef100_Q6F2X5 Putative polyprotein [Oryza sativa] 149 2e-34
UniRef100_Q8LHG2 Putative retroelement polyprotein [Oryza sativa] 149 2e-34
UniRef100_Q9XEM5 Polyprotein [Oryza sativa] 148 3e-34
UniRef100_Q75IL3 Putative polyprotein [Oryza sativa] 148 3e-34
UniRef100_Q8LM87 Putative retroelement [Oryza sativa] 148 4e-34
UniRef100_Q8LLX8 Putative retroelement [Oryza sativa] 148 4e-34
UniRef100_Q8H843 Putative polyprotein [Oryza sativa] 148 4e-34
UniRef100_Q94HV6 Putative retroelement [Oryza sativa] 148 4e-34
>UniRef100_Q5W6A4 Putative polyprotein [Oryza sativa]
Length = 1499
Score = 152 bits (385), Expect = 2e-35
Identities = 121/453 (26%), Positives = 193/453 (41%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR HPPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 95 LAEFLRIHPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 153
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F FL + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 154 HFQATQPEGQPITWARFTAAFLRTHVPAGVMALKKREFRELKQGNRSVMEYLYEFNNLAR 213
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELVSS---CRIYEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV + ++ ++H
Sbjct: 214 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDSPDFQRLVDKSIRLEVKHKELESHKH 271
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGE-KGHKSNVCD 268
++ R + ++ Y+ P G + + + R AP + + + +S
Sbjct: 272 RLANFRHQQGANQRIHYTNPYPGGSSSQQQQHQQQPRSAPRPQFVVRVPQPQQQQSQQGT 331
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 332 RAPRPPTPAVQPGQGRRDVQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRPNNGGKDV 391
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 392 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 451
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 452 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 510
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 511 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 543
>UniRef100_Q7XS19 OSJNBa0080E14.17 protein [Oryza sativa]
Length = 1494
Score = 152 bits (383), Expect = 3e-35
Identities = 122/454 (26%), Positives = 196/454 (42%), Gaps = 24/454 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 357 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 415
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 416 HFQATQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVMEYLHEFNNLAR 475
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 476 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 533
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 534 RLANFRNQQDANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 593
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 594 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 653
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 654 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 713
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 714 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 772
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQVV 466
C +TV E+ F T+ + +L Q+V
Sbjct: 773 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQIV 806
>UniRef100_Q8LSS7 Putative polyprotein [Oryza sativa]
Length = 1784
Score = 151 bits (381), Expect = 4e-35
Identities = 122/453 (26%), Positives = 195/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 397 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 455
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SVTEY +F LA+
Sbjct: 456 HFQATQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVTEYLHEFNNLAR 515
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 516 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 573
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 574 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 633
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 634 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 693
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 694 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 753
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 754 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDSKNLDVILGMNWLAQFQGVVD 812
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 813 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 845
>UniRef100_Q7XRP7 OSJNBb0080H08.11 protein [Oryza sativa]
Length = 1809
Score = 150 bits (379), Expect = 8e-35
Identities = 121/453 (26%), Positives = 196/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 397 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 455
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 456 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 515
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRIYE--EDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ + ++ ++H +
Sbjct: 516 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEDKHKELESHKR 573
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGE-KGHKSNVCD 268
++ R + ++ Y+ P G ++++ + R AP + + + +S
Sbjct: 574 RLANFRNQQGANQRVRYTNPYPGGSSSQQEQQQQQPRSAPRPQFVVRVPQPQQQQSQQGT 633
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQ--------PKKVRTGGK-- 318
R + Q G + D + +C+NC E GH + +C + P + GGK
Sbjct: 634 RAPRPPMPTVQPGQSRRDAQGPQRLCFNCFEPGHFADKCPKLRRQQGQAPPRSNNGGKDV 693
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 694 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 753
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 754 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKSLDVILGMNWLAQFQGVVD 812
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 813 CARRTVTLYPGPEQPVVFFAPPTSVSSSELHQI 845
>UniRef100_Q7XLC0 OSJNBa0011K22.9 protein [Oryza sativa]
Length = 1699
Score = 150 bits (379), Expect = 8e-35
Identities = 118/452 (26%), Positives = 196/452 (43%), Gaps = 24/452 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 404 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 462
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 463 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 522
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 523 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 580
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSNVCDR 269
++ R + ++ Y+ P G +++P+ P ++ ++ ++ R
Sbjct: 581 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQPRSAPRPQFVVRVPQPQQ-QQNQQGTR 639
Query: 270 DEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------------T 315
+ Q G D + +C+NC E GH + +C +P++ + T
Sbjct: 640 VPRPPTPAVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDVT 699
Query: 316 GGKVFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMNG 375
G+V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 700 RGRVNHVTAEDVLTTPDVIVGTFLIHSVPATTLFDSGASHSFISVPFVGRNQLGVERLRN 759
Query: 376 EMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHINC 435
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++C
Sbjct: 760 PLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDC 818
Query: 436 FSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
+TV E+ F T+ + +L Q+
Sbjct: 819 ARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 850
>UniRef100_Q6I552 Putative polyprotein [Oryza sativa]
Length = 1943
Score = 150 bits (379), Expect = 8e-35
Identities = 122/453 (26%), Positives = 195/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 365 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 423
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 424 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 483
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 484 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 541
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + ++ + N
Sbjct: 542 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRPAPRPQFVVRVPQQQQQQNQQGT 601
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + GQ D +C+NC E GH + +C +P++ + GGK
Sbjct: 602 RAPRPPTPAGQPVQGRRDASGPQRLCFNCFEPGHFADKCPKPRRQKGQAPPRSNNGGKDV 661
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V K L V +
Sbjct: 662 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLR 721
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 722 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 780
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 781 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 813
>UniRef100_Q7XG24 Putative retroelement [Oryza sativa]
Length = 959
Score = 150 bits (378), Expect = 1e-34
Identities = 121/453 (26%), Positives = 195/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 327 LVEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 385
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 386 HFQATQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVMEYLHEFNNLAR 445
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ +++ ++H +
Sbjct: 446 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKQKELESHKR 503
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGE-KGHKSNVCD 268
++ R + ++ Y+ P G +++ + R AP + + + +S
Sbjct: 504 RLASFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQLQQQQSQQGT 563
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 564 RAPCPPTPAAQSGQVRRDVQGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 623
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 624 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 683
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 684 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 742
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 743 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 775
>UniRef100_Q6F2Y4 Putative polyprotein [Oryza sativa]
Length = 1764
Score = 150 bits (378), Expect = 1e-34
Identities = 122/453 (26%), Positives = 195/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 339 LTEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 397
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 398 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 457
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 458 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 515
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + ++ + N
Sbjct: 516 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRPAPRPQFVVRVPQQQQQQNQQGT 575
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + GQ D +C+NC E GH + +C +P++ + GGK
Sbjct: 576 RAPRPPTPAGQPVQGRRDASGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRPNNGGKDV 635
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V K L V +
Sbjct: 636 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLR 695
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 696 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 754
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 755 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 787
>UniRef100_Q8S5K5 Putative retroelement [Oryza sativa]
Length = 892
Score = 149 bits (377), Expect = 1e-34
Identities = 122/453 (26%), Positives = 194/453 (41%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 386 LAEFLRIRPPTFSSSNNPVDALVWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 444
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 445 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 504
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 505 YAPEDVREDEE--KQEKFLAGMDPELSVHLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 562
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 563 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 622
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +CYNC E GH + +C +P++ + GGK
Sbjct: 623 RAPRPPTPTVQSGQGRRDAQGPQRLCYNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 682
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 683 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 742
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL +
Sbjct: 743 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVE 801
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 802 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 834
>UniRef100_Q8S678 Putative polyprotein [Oryza sativa]
Length = 1859
Score = 149 bits (376), Expect = 2e-34
Identities = 121/453 (26%), Positives = 196/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 493 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 551
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F ++ P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 552 HFQATQPEGQPITWARFTAAFRRIHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 611
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 612 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 669
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 670 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 729
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 730 RAPRPPTPTVQPGQGRRDTQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 789
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 790 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 849
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 850 NPLLITTPG-GVMTAKYFSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 908
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 909 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 941
>UniRef100_Q60DI3 Putative polyprotein [Oryza sativa]
Length = 1826
Score = 149 bits (375), Expect = 2e-34
Identities = 122/453 (26%), Positives = 194/453 (41%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 424 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 482
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 483 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 542
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF GL ++ + F LV S R+ ++ ++H +
Sbjct: 543 YAPEDVREDEE--KQEKFLAGLDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 600
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 601 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 660
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 661 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 720
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 721 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 780
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 781 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 839
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 840 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 872
>UniRef100_Q7XLR3 OSJNBb0093G06.8 protein [Oryza sativa]
Length = 1770
Score = 149 bits (375), Expect = 2e-34
Identities = 121/453 (26%), Positives = 194/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 345 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 403
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 404 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 463
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 464 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 521
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 522 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 581
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 582 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 641
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 642 IRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 701
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 702 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFSSDLILLDTKNLDVILGMNWLAQFQGVVD 760
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 761 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 793
>UniRef100_Q6F2X5 Putative polyprotein [Oryza sativa]
Length = 1747
Score = 149 bits (375), Expect = 2e-34
Identities = 122/453 (26%), Positives = 194/453 (41%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 345 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 403
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 404 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 463
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF GL ++ + F LV S R+ ++ ++H +
Sbjct: 464 YAPEDVREDEE--KQEKFLAGLDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 521
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 522 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 581
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 582 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 641
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 642 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 701
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 702 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 760
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ +L Q+
Sbjct: 761 CARRTVTLYRGPEQPVVFFAPPTSVSSSELHQI 793
>UniRef100_Q8LHG2 Putative retroelement polyprotein [Oryza sativa]
Length = 1796
Score = 149 bits (375), Expect = 2e-34
Identities = 121/453 (26%), Positives = 192/453 (41%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 371 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 429
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 430 HFQATQPKGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 489
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELVSSCRIYE---EDTKAHYK 209
+ P E E K KF G+ ++ + F LV E ++ ++H +
Sbjct: 490 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSICLEAKHKELESHKR 547
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 548 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRPAPRPQFVVRVPQPQQQQNQQGT 607
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 608 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGKDV 667
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V K L V +
Sbjct: 668 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLR 727
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 728 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 786
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 787 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 819
>UniRef100_Q9XEM5 Polyprotein [Oryza sativa]
Length = 1521
Score = 148 bits (374), Expect = 3e-34
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 22/451 (4%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL +E+ ++QC++ +KV F TH L A WW +
Sbjct: 92 LPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 151
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ G VTW F R F P+ V +K+ EF + QG+ +VTEY +F LA+
Sbjct: 152 HM-ATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLAR 210
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELVSSCRIYEEDTKAHYKVMS 212
+ P AE K KF GL ++ + F LV I +ED + M
Sbjct: 211 YAPEDVRTDAE--KQEKFMAGLDDELTNQLISGDYADFERLVDKA-IRQEDQR---NKMD 264
Query: 213 ERRGKGQ*SRPK-PYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN------ 265
+R Q P+ + P Q+ R+ P F G G +++
Sbjct: 265 RKRKAAQFRAPQGSHQRPRFTPGQQGGPTTMIVRQHRPFNSSNFHQGSSGSQNHHGSQPN 324
Query: 266 --VCDRDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR---TGGKVF 320
R + GQ + C+NC E GH + +C +P++ +V
Sbjct: 325 RGAAPRPPMAPAQSGQPAQAKKETGVKPGSCFNCGELGHFADKCPKPRRAGPRFIQARVN 384
Query: 321 ALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMNGEMVVE 380
+ + ++ GT NS + D+GATH FI GL ++ M V
Sbjct: 385 HASAEEAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELRTPMRVH 444
Query: 381 TPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHINCFSKTV 440
TP S + S S L+ + F +L+ L +DVI GM+WL I+C ++TV
Sbjct: 445 TPGNSSTSVSF-SPSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCANRTV 503
Query: 441 HFSSAEEES--EAKFLTTKQLKQLEQVVCQV 469
++ + E+ ++ KQ L Q+ ++
Sbjct: 504 TLTNEKGETVVHKSLVSPKQGASLNQIEAEI 534
>UniRef100_Q75IL3 Putative polyprotein [Oryza sativa]
Length = 1570
Score = 148 bits (374), Expect = 3e-34
Identities = 119/453 (26%), Positives = 195/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 145 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLHGPASLWW-D 203
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
++ +G VTW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 204 HFQAMQPEGQPVTWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 263
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P + E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 264 YTPEDVRKDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 321
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 322 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 381
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR-------------- 314
R + Q G D +C+NC E GH + +C +P++ +
Sbjct: 382 RAPRPPTPTVQPGQGRRDASGPQRLCFNCFEPGHFADKCPKPRRQQGQAPPRPNNGGKDV 441
Query: 315 TGGKVFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
+ G+V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 442 SRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 501
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 502 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 560
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 561 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 593
>UniRef100_Q8LM87 Putative retroelement [Oryza sativa]
Length = 1821
Score = 148 bits (373), Expect = 4e-34
Identities = 119/453 (26%), Positives = 194/453 (42%), Gaps = 24/453 (5%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 396 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLGTVQCSDEEKVIFAAHQLQGPASLWW-D 454
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 455 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 514
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 515 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 572
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN-VCD 268
++ R + ++ Y+ P G +++ + R AP + + + N
Sbjct: 573 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 632
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR-------------- 314
R + Q G D + +C+NC E GH + +C +P++ +
Sbjct: 633 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRRQQGQAPPRSNNGGRDV 692
Query: 315 TGGKVFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
G+V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 693 IRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 752
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 753 NPLLITTPG-GVMTAKYYSPTVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 811
Query: 435 CFSKTVHFSSAEEESEAKFL--TTKQLKQLEQV 465
C +TV E+ F T+ + +L Q+
Sbjct: 812 CARRTVTLYRGPEQPVVFFAPPTSVRSSELHQI 844
>UniRef100_Q8LLX8 Putative retroelement [Oryza sativa]
Length = 1825
Score = 148 bits (373), Expect = 4e-34
Identities = 119/449 (26%), Positives = 192/449 (42%), Gaps = 22/449 (4%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL V + +QCS+ +KV F H L A WW
Sbjct: 400 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 458
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ +G +TW F F + P V K+ EF E+KQG+ SV EY +F LA+
Sbjct: 459 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 518
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRI--YEEDTKAHYK 209
+ P E E K KF G+ ++ + F LV S R+ ++ ++H +
Sbjct: 519 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 576
Query: 210 VMSERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGE-KGHKSNVCD 268
++ R + ++ Y+ P G +++ + R AP + + + +
Sbjct: 577 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQGQQGT 636
Query: 269 RDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR--------TGGK-- 318
R + Q G D + +C+NC E GH + +C +P++ + GGK
Sbjct: 637 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHYADKCPKPRRQQGQAPPRSNNGGKDV 696
Query: 319 ----VFALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMN 374
V +T + +I GT +S + D+GA+H FI V + L V +
Sbjct: 697 IRGRVNHVTAKDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLR 756
Query: 375 GEMVVETPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHIN 434
+++ TP G +T + + + G F DL+ L +DVI GMNWL ++
Sbjct: 757 NPLLITTPG-GVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVD 815
Query: 435 CFSKTVHFSSAEEESEAKFLTTKQLKQLE 463
C +TV E+ F+ +K E
Sbjct: 816 CARRTVTLYRGPEQPVVFFVPPTSVKSSE 844
>UniRef100_Q8H843 Putative polyprotein [Oryza sativa]
Length = 1796
Score = 148 bits (373), Expect = 4e-34
Identities = 121/451 (26%), Positives = 190/451 (41%), Gaps = 22/451 (4%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL +E+ ++QC++ +KV F TH L A WW +
Sbjct: 367 LPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 426
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ G VTW F R F P+ V +K+ EF + QG+ +VTEY +F LA+
Sbjct: 427 HM-ATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVTEYLQEFNRLAR 485
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELVSSCRIYEEDTKAHYKVMS 212
+ P AE K KF GL ++ + F LV I +ED + M
Sbjct: 486 YAPEDVRTDAE--KQEKFMAGLDDELTNQLISGDYADFERLVDKA-IRQEDQR---NKMD 539
Query: 213 ERRGKGQ*SRPK-PYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGHKSN------ 265
+R Q P+ + P Q+ R+ P F G G +++
Sbjct: 540 RKRKAAQFRAPQGSHQRPRFTPGQQGGPTTMIVRQHRPFNSSNFHQGSSGSQNHHGGQPN 599
Query: 266 --VCDRDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR---TGGKVF 320
R + G + C+NC E GH + +C +P++ +V
Sbjct: 600 RGAAPRPPMAPAQSGPSAQAKKETGAKPGSCFNCGELGHFADKCPKPRRAGPRFIQARVN 659
Query: 321 ALTGTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMNGEMVVE 380
+ + ++ GT NS + D+GATH FI GL +++ M V
Sbjct: 660 HASAEEAQTAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVH 719
Query: 381 TPAKGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHINCFSKTV 440
TP S + S S L+ + F +L+ L +DVI GM+WL I+C ++TV
Sbjct: 720 TPGNSSTSVSF-SPSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCANRTV 778
Query: 441 HFSSAEEESEA--KFLTTKQLKQLEQVVCQV 469
++ + E+ ++ KQ L Q+ ++
Sbjct: 779 TLTNEKGETVVYKSLVSPKQGVSLNQIEAEI 809
>UniRef100_Q94HV6 Putative retroelement [Oryza sativa]
Length = 1773
Score = 148 bits (373), Expect = 4e-34
Identities = 117/426 (27%), Positives = 182/426 (42%), Gaps = 14/426 (3%)
Query: 33 LETFLRNHPPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVS 92
L FLR PPTF +P A WL +E+ ++QC++ +KV F TH L A WW +
Sbjct: 348 LPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 407
Query: 93 LLPILEQDGAAVTWVVFRREFLNMYFPEDVRGKKEIEFLEMKQGDMSVTEYAAKFVELAK 152
+ G VTW F R F P+ V +K+ EF + QG+ +VTEY +F LA+
Sbjct: 408 HM-ATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLAR 466
Query: 153 FYPHYTTETAEFSKCIKFENGLRADIKRAIGYEKIRIFSELV-SSCRIYEEDTKAHYKVM 211
+ P AE K KF GL ++ + F LV + R ++ K K
Sbjct: 467 YAPEDVRTDAE--KQEKFMAGLDDELTNQLISGDYADFERLVDKAIRQEDQRNKIDRKRK 524
Query: 212 SERRGKGQ*SRPKPYSAPTDKGKQRLNDERRPKRRDAPTEIICFKCGEKGH-----KSNV 266
+ + Q S +P P +G R+ R P+ G + H
Sbjct: 525 AAQFRAPQGSHQRPRFTPGQQGGPTTMIVRQ-HRPFNPSNFHQGTSGSQNHHGGQPNRGA 583
Query: 267 CDRDEKKCFRCGQKGHTLADCKRGDVVCYNCNEEGHISSQCTQPKKVR---TGGKVFALT 323
R + GQ + C+NC E GH + +C +P++ +V +
Sbjct: 584 APRPSVAPAQSGQPAQAKKETGAKPGSCFNCGELGHFADKCPKPRRAGPRFIQARVNHAS 643
Query: 324 GTQTVNEDRLIRGTCFFNSTHLIAIIDTGATHCFIVVDCAYKLGLIVSDMNGEMVVETPA 383
+ ++ GT NS + D+GATH FI + GL +++ M V TP
Sbjct: 644 AEEAQTAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGRYGLRKEELSTPMRVHTPG 703
Query: 384 KGSVTTSLVCLSCLLSMFGRDFEVDLVCLPLSGVDVIFGMNWLEYNHFHINCFSKTVHFS 443
S + S S L+ + F +L+ L +DVI GM+WL I+C ++TV +
Sbjct: 704 NSSTSVSF-SPSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCANRTVTLT 762
Query: 444 SAEEES 449
+ + E+
Sbjct: 763 NEKGET 768
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 805,549,000
Number of Sequences: 2790947
Number of extensions: 35023558
Number of successful extensions: 101746
Number of sequences better than 10.0: 3794
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 2745
Number of HSP's that attempted gapping in prelim test: 84223
Number of HSP's gapped (non-prelim): 13079
length of query: 471
length of database: 848,049,833
effective HSP length: 131
effective length of query: 340
effective length of database: 482,435,776
effective search space: 164028163840
effective search space used: 164028163840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)
Medicago: description of AC146719.4