Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146719.12 + phase: 0 /pseudo
         (758 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8LR74 P0421H07.9 protein [Oryza sativa]                     76  3e-12
UniRef100_Q9M399 Hypothetical protein F2K15.260 [Arabidopsis tha...    68  9e-10
UniRef100_Q9CA09 Hypothetical protein T1G12.10 [Arabidopsis thal...    68  9e-10
UniRef100_Q94BY0 AT3g49400/F2K15_260 [Arabidopsis thaliana]            68  9e-10

>UniRef100_Q8LR74 P0421H07.9 protein [Oryza sativa]
          Length = 974

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 34/72 (47%), Positives = 49/72 (67%)

Query: 6  SPLQPAMLMGSPSFPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKVIPNEPLILG 65
          S  Q A L+ SPS+PNA+AWS +NL+A ASGH +TIL P    GPR L+ + P++P  +G
Sbjct: 3  SHYQAATLIASPSYPNAIAWSTENLVAVASGHLITILNPSALEGPRELVVLRPSDPFPIG 62

Query: 66 FIDRKACLQLCI 77
           ++R+   + CI
Sbjct: 63 VVNREDLFEPCI 74


>UniRef100_Q9M399 Hypothetical protein F2K15.260 [Arabidopsis thaliana]
          Length = 719

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6  SPLQPAMLMGSPSFPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKVIPNEPLILG 65
          S  Q A L+ SPS+PNA+AWS +NLIA A+GH V I+ P LP GPRGLI +   E   +G
Sbjct: 3  SRFQEASLVTSPSYPNAVAWSSENLIAVAAGHLVIIINPALPTGPRGLITISDAELYQIG 62


>UniRef100_Q9CA09 Hypothetical protein T1G12.10 [Arabidopsis thaliana]
          Length = 798

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6  SPLQPAMLMGSPSFPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKVIPNEPLILG 65
          S  Q A L+ SPS+PNA+AWS +NLIA A+GH V I+ P LP GPRGLI +   E   +G
Sbjct: 3  SRFQEASLVTSPSYPNAVAWSSENLIAVAAGHLVIIINPALPTGPRGLITISDAELYQIG 62


>UniRef100_Q94BY0 AT3g49400/F2K15_260 [Arabidopsis thaliana]
          Length = 793

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6  SPLQPAMLMGSPSFPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKVIPNEPLILG 65
          S  Q A L+ SPS+PNA+AWS +NLIA A+GH V I+ P LP GPRGLI +   E   +G
Sbjct: 3  SRFQEASLVTSPSYPNAVAWSSENLIAVAAGHLVIIINPALPTGPRGLITISDAELYQIG 62


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.360    0.162    0.604 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,086,155,965
Number of Sequences: 2790947
Number of extensions: 39618934
Number of successful extensions: 134490
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134486
Number of HSP's gapped (non-prelim): 4
length of query: 758
length of database: 848,049,833
effective HSP length: 135
effective length of query: 623
effective length of database: 471,271,988
effective search space: 293602448524
effective search space used: 293602448524
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 79 (35.0 bits)


Medicago: description of AC146719.12