BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146719.10 + phase: 0 /pseudo
(112 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SIV2 26S proteasome regulatory subunit S2 [Arabidops... 152 2e-36
UniRef100_Q6XJG8 26S proteasome subunit RPN1b [Arabidopsis thali... 151 3e-36
UniRef100_Q5Z854 Putative 26S proteasome regulatory subunit S2 [... 145 3e-34
UniRef100_Q8W3N6 26S proteasome regulatory particle non-ATPase s... 145 3e-34
UniRef100_Q6Z2Z3 Putative 26S proteasome regulatory subunit S2 [... 144 5e-34
UniRef100_Q6K2Q1 Putative proteasome 26S non-ATPase subunit 2 [O... 141 3e-33
UniRef100_Q8W3N7 26S proteasome regulatory particle non-ATPase s... 139 2e-32
UniRef100_O49456 Hypothetical protein F20O9.150 [Arabidopsis tha... 130 5e-30
UniRef100_UPI000036375B UPI000036375B UniRef100 entry 125 3e-28
UniRef100_UPI000036375A UPI000036375A UniRef100 entry 125 3e-28
UniRef100_UPI0000363759 UPI0000363759 UniRef100 entry 125 3e-28
UniRef100_UPI0000363758 UPI0000363758 UniRef100 entry 125 3e-28
UniRef100_UPI00002DAAAA UPI00002DAAAA UniRef100 entry 125 3e-28
UniRef100_Q6NTP6 Hypothetical protein [Xenopus laevis] 125 3e-28
UniRef100_Q6NTK4 MGC83233 protein [Xenopus laevis] 125 3e-28
UniRef100_UPI00001D07C8 UPI00001D07C8 UniRef100 entry 123 9e-28
UniRef100_UPI000036B8AA UPI000036B8AA UniRef100 entry 123 9e-28
UniRef100_UPI00003AF320 UPI00003AF320 UniRef100 entry 123 9e-28
UniRef100_Q6PHK7 Hypothetical protein zgc:65921 [Brachydanio rerio] 123 9e-28
UniRef100_Q5ZLU4 Hypothetical protein [Gallus gallus] 123 9e-28
>UniRef100_Q9SIV2 26S proteasome regulatory subunit S2 [Arabidopsis thaliana]
Length = 891
Score = 152 bits (383), Expect = 2e-36
Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ + GKYHYVLYFLVLAMQ P M+LTV ENLKPL VP+RVGQAVDV
Sbjct: 786 LDMKPIILGKYHYVLYFLVLAMQ-----------PRMMLTVDENLKPLSVPVRVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELAT+KYIP+SP+LE F+ILKE
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKE 884
>UniRef100_Q6XJG8 26S proteasome subunit RPN1b [Arabidopsis thaliana]
Length = 891
Score = 151 bits (382), Expect = 3e-36
Identities = 79/110 (71%), Positives = 90/110 (81%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHYVLYFLVLAMQ P M+LTV ++LKP+ VP+RVGQAVDV
Sbjct: 786 LDMKSIILGKYHYVLYFLVLAMQ-----------PRMMLTVDQSLKPISVPVRVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKYIP+SP+LE FVILKE
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLSPILEGFVILKE 884
>UniRef100_Q5Z854 Putative 26S proteasome regulatory subunit S2 [Oryza sativa]
Length = 822
Score = 145 bits (365), Expect = 3e-34
Identities = 76/110 (69%), Positives = 88/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 717 LDMKSIILGKYHYMLYILTLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 765
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL++
Sbjct: 766 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRK 815
>UniRef100_Q8W3N6 26S proteasome regulatory particle non-ATPase subunit1b [Oryza
sativa]
Length = 238
Score = 145 bits (365), Expect = 3e-34
Identities = 76/110 (69%), Positives = 88/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 133 LDMKSIILGKYHYMLYILTLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 181
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL++
Sbjct: 182 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRK 231
>UniRef100_Q6Z2Z3 Putative 26S proteasome regulatory subunit S2 [Oryza sativa]
Length = 898
Score = 144 bits (363), Expect = 5e-34
Identities = 77/110 (70%), Positives = 87/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S GKYHY+LY +VLAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 793 LDMKSTILGKYHYILYIIVLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKYIP++ VLE FVILK+
Sbjct: 842 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILKK 891
>UniRef100_Q6K2Q1 Putative proteasome 26S non-ATPase subunit 2 [Oryza sativa]
Length = 891
Score = 141 bits (356), Expect = 3e-33
Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 11/109 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+ VGQAVDV
Sbjct: 786 LDMKSIILGKYHYMLYILALAMQ-----------PRMLLTVDEDLKPLSVPVCVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILK 110
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL+
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILR 883
>UniRef100_Q8W3N7 26S proteasome regulatory particle non-ATPase subunit1a [Oryza
sativa]
Length = 107
Score = 139 bits (350), Expect = 2e-32
Identities = 73/101 (72%), Positives = 81/101 (79%), Gaps = 11/101 (10%)
Query: 10 GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDVVGQAGRPK 69
GKYHY+LY L LAMQ P MLLTV E+LKPL VP+ VGQAVDVVGQAGRPK
Sbjct: 10 GKYHYMLYILALAMQ-----------PRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGRPK 58
Query: 70 KITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILK 110
ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL+
Sbjct: 59 TITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILR 99
>UniRef100_O49456 Hypothetical protein F20O9.150 [Arabidopsis thaliana]
Length = 1103
Score = 130 bits (328), Expect = 5e-30
Identities = 70/103 (67%), Positives = 82/103 (78%), Gaps = 12/103 (11%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHYVLYFLVLAMQ P M+LTV ++LKP+ VP+RVGQAVDV
Sbjct: 889 LDMKSIILGKYHYVLYFLVLAMQ-----------PRMMLTVDQSLKPISVPVRVGQAVDV 937
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKY-IPISPVL 103
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY +P+ P+L
Sbjct: 938 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYVVPLIPLL 980
>UniRef100_UPI000036375B UPI000036375B UniRef100 entry
Length = 542
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 442 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 490
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 491 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 540
>UniRef100_UPI000036375A UPI000036375A UniRef100 entry
Length = 893
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 790 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 838
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 839 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 888
>UniRef100_UPI0000363759 UPI0000363759 UniRef100 entry
Length = 952
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 850 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 898
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 899 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 948
>UniRef100_UPI0000363758 UPI0000363758 UniRef100 entry
Length = 902
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 799 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 847
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 848 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 897
>UniRef100_UPI00002DAAAA UPI00002DAAAA UniRef100 entry
Length = 333
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 230 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 278
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 279 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 328
>UniRef100_Q6NTP6 Hypothetical protein [Xenopus laevis]
Length = 897
Score = 125 bits (313), Expect = 3e-28
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 793 LDVRNIVLGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 842 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 891
>UniRef100_Q6NTK4 MGC83233 protein [Xenopus laevis]
Length = 897
Score = 125 bits (313), Expect = 3e-28
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 793 LDVRNIVLGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 842 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 891
>UniRef100_UPI00001D07C8 UPI00001D07C8 UniRef100 entry
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>UniRef100_UPI000036B8AA UPI000036B8AA UniRef100 entry
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>UniRef100_UPI00003AF320 UPI00003AF320 UniRef100 entry
Length = 181
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 79 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 127
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 128 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEHVPVTPILEGFVILRK 177
>UniRef100_Q6PHK7 Hypothetical protein zgc:65921 [Brachydanio rerio]
Length = 897
Score = 123 bits (309), Expect = 9e-28
Identities = 64/102 (62%), Positives = 78/102 (75%), Gaps = 11/102 (10%)
Query: 10 GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDVVGQAGRPK 69
GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDVVGQAG+PK
Sbjct: 801 GKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPK 849
Query: 70 KITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
ITGFQTH+T VLLA G+RAELATE++IP++P+LE FVIL++
Sbjct: 850 AITGFQTHTTPVLLAHGERAELATEEFIPVTPILEGFVILRK 891
>UniRef100_Q5ZLU4 Hypothetical protein [Gallus gallus]
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEHVPVTPILEGFVILRK 902
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.333 0.149 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,218,980
Number of Sequences: 2790947
Number of extensions: 5966689
Number of successful extensions: 16264
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 16146
Number of HSP's gapped (non-prelim): 75
length of query: 112
length of database: 848,049,833
effective HSP length: 88
effective length of query: 24
effective length of database: 602,446,497
effective search space: 14458715928
effective search space used: 14458715928
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146719.10