Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146693.3 - phase: 0 /pseudo
         (634 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_UPI00003ABBC4 UPI00003ABBC4 UniRef100 entry                  36  3.0
UniRef100_P50478 Amphiphysin [Gallus gallus]                           36  3.0
UniRef100_O08838 Amphiphysin [Rattus norvegicus]                       35  8.8

>UniRef100_UPI00003ABBC4 UPI00003ABBC4 UniRef100 entry
          Length = 682

 Score = 36.2 bits (82), Expect = 3.0
 Identities = 21/55 (38%), Positives = 27/55 (48%), Gaps = 7/55 (12%)

Query: 318 PNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTP 372
           P  +S   SP + P  +L+P +P   RPKSP    K PP+       P  PK TP
Sbjct: 264 PEEVSPLPSPTASPNHMLAPASPAPARPKSPTQLRKGPPV-------PPLPKLTP 311


>UniRef100_P50478 Amphiphysin [Gallus gallus]
          Length = 682

 Score = 36.2 bits (82), Expect = 3.0
 Identities = 21/55 (38%), Positives = 27/55 (48%), Gaps = 7/55 (12%)

Query: 318 PNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTP 372
           P  +S   SP + P  +L+P +P   RPKSP    K PP+       P  PK TP
Sbjct: 264 PEEVSPLPSPTASPNHMLAPASPAPARPKSPTQLRKGPPV-------PPLPKLTP 311


>UniRef100_O08838 Amphiphysin [Rattus norvegicus]
          Length = 683

 Score = 34.7 bits (78), Expect = 8.8
 Identities = 20/55 (36%), Positives = 26/55 (46%), Gaps = 7/55 (12%)

Query: 318 PNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTP 372
           P   S   SP + P   L+P +P  +RP+SP    K PP+       P  PK TP
Sbjct: 264 PEEASPLPSPTASPNHTLAPASPAPVRPRSPSQTRKGPPV-------PPLPKVTP 311


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.364    0.164    0.631 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 851,754,565
Number of Sequences: 2790947
Number of extensions: 29630132
Number of successful extensions: 136764
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 136764
Number of HSP's gapped (non-prelim): 3
length of query: 634
length of database: 848,049,833
effective HSP length: 134
effective length of query: 500
effective length of database: 474,062,935
effective search space: 237031467500
effective search space used: 237031467500
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 78 (34.7 bits)


Medicago: description of AC146693.3