
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146681.8 + phase: 0
(173 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SK79 Hypothetical protein At2g20220 [Arabidopsis tha... 131 8e-30
UniRef100_UPI00003119FB UPI00003119FB UniRef100 entry 38 0.12
UniRef100_UPI000025C10B UPI000025C10B UniRef100 entry 35 0.62
UniRef100_Q98CM8 ATP-dependent nuclease subunit A [Rhizobium loti] 35 0.62
UniRef100_Q8YNV6 Alr4455 protein [Anabaena sp.] 34 1.8
UniRef100_UPI00002D7C79 UPI00002D7C79 UniRef100 entry 33 2.4
UniRef100_O14206 Hypothetical protein C1B9.03c in chromosome I [... 33 2.4
UniRef100_Q8ZVG2 Valyl-tRNA synthetase [Pyrobaculum aerophilum] 33 3.1
UniRef100_UPI00002435B0 UPI00002435B0 UniRef100 entry 33 4.0
UniRef100_Q7PWZ4 ENSANGP00000004153 [Anopheles gambiae str. PEST] 33 4.0
UniRef100_Q6HH66 Hypothetical protein [Bacillus thuringiensis] 32 5.2
UniRef100_UPI000036CB46 UPI000036CB46 UniRef100 entry 32 6.8
UniRef100_UPI000023F000 UPI000023F000 UniRef100 entry 32 6.8
UniRef100_Q8L7N3 Hypothetical protein At1g78790 [Arabidopsis tha... 32 6.8
UniRef100_Q7Y5A8 Gp61 DNA primase subunit [Bacteriophage RB69] 32 6.8
UniRef100_Q5RCD4 Hypothetical protein DKFZp459D2032 [Pongo pygma... 32 6.8
UniRef100_Q5R607 Hypothetical protein DKFZp459D0927 [Pongo pygma... 32 6.8
UniRef100_Q7Z753 DEAH (Asp-Glu-Ala-His) box polypeptide 30, isof... 32 6.8
UniRef100_O94965 KIAA0890 protein [Homo sapiens] 32 6.8
UniRef100_Q9HEI9 Related to the component Tra1 of the SAGA compl... 32 6.8
>UniRef100_Q9SK79 Hypothetical protein At2g20220 [Arabidopsis thaliana]
Length = 190
Score = 131 bits (329), Expect = 8e-30
Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
Query: 9 SLITLCIDHLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQDV 68
SL LCI L QLL ++ IP +YELPS LLD +++ L AL F +MPF +
Sbjct: 6 SLAFLCIQSLKIQLLESDNP----IPDLYELPSELLDGIVAHLPALALQKFQTNMPFHCL 61
Query: 69 NEEDFSRDDSTNNKRKRSRDWNLNTAWQKLFELRWPDLINQIQ-PSDWQKAYWEAHLQNC 127
+ + D RKR+R+ L ++W+ LF+LRWPD +++++ P+DWQ+ YWE HLQNC
Sbjct: 62 DSYESGDDCCLITGRKRARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWEKHLQNC 121
Query: 128 LDEAAEIALISPFKGRLADINISGTMLSCFLCNE 161
+DEAAE+AL F GR+ IN+S +L ++C+E
Sbjct: 122 VDEAAEVALRPTFSGRICSINVSDNILR-YICHE 154
>UniRef100_UPI00003119FB UPI00003119FB UniRef100 entry
Length = 616
Score = 37.7 bits (86), Expect = 0.12
Identities = 30/116 (25%), Positives = 48/116 (40%), Gaps = 16/116 (13%)
Query: 17 HLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQ-----DVNEE 71
+ AN + G D+V+ + + Y LP H DD+ + TP L+ L +Q + +
Sbjct: 291 NFANHMSGGNDDVMGMFSLFYGLPGHYYDDIRNDKTPPVLFDEMLRQDYQFGLFGALEDA 350
Query: 72 DFSRDDSTNNKRK------RSRDWNLNTAWQKLFELRWPD-----LINQIQPSDWQ 116
R + RK ++ D L WQ+ R PD L+ P D+Q
Sbjct: 351 QKYRQSILSGLRKQVFVSEQTDDTQLIGDWQQWLAKRSPDRPWFSLVYLSSPGDYQ 406
>UniRef100_UPI000025C10B UPI000025C10B UniRef100 entry
Length = 275
Score = 35.4 bits (80), Expect = 0.62
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 17 HLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQ 66
+ AN + G D+V+ + + Y LP H DD+ + TP L+ L +Q
Sbjct: 184 NFANHMSGGNDDVMGMFSLFYGLPGHYYDDIRNDKTPPVLFDEMLRQDYQ 233
>UniRef100_Q98CM8 ATP-dependent nuclease subunit A [Rhizobium loti]
Length = 1170
Score = 35.4 bits (80), Expect = 0.62
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 4 EAPPSSLITLCIDHLANQLLFGEDEVIAII-----PVIYELPSHLLDDLISRLT 52
E PP+ L+ L + Q L+ EV A + P + ELP+H++DD ++RLT
Sbjct: 1115 EVPPAYLLQLALYRALLQPLYPGREVKAALLFTEAPRLIELPAHVMDDALARLT 1168
>UniRef100_Q8YNV6 Alr4455 protein [Anabaena sp.]
Length = 253
Score = 33.9 bits (76), Expect = 1.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 94 AWQKLFELRWPDLINQIQPSDWQKAYWEAH--LQNCLDEAAEIALISPFKG 142
AW + E+ +P L + P +W K YWE LQN LD E+ +IS G
Sbjct: 70 AW--MAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLD--IEVPVISAVNG 116
>UniRef100_UPI00002D7C79 UPI00002D7C79 UniRef100 entry
Length = 347
Score = 33.5 bits (75), Expect = 2.4
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 40 PSHLLDDLISRLTPHALYHFHLHMPFQDVNEEDFSRDDSTNNKRKRSRDWNLNT--AWQK 97
P LD+ ++ L +++ F+LHMP ++N ED + + ++ L+ AWQ
Sbjct: 95 PEQQLDESLTALKQNSVPIFYLHMPATEINLEDTLASVQSAYAAGKFEEFGLSNFPAWQV 154
Query: 98 LFELRWPDLINQIQPSDWQKAYWEAHLQNCLDEAAEIALISPFKGRLADINISGTMLSCF 157
+ ++ + P+ +Q Y N L+ +E L+ + G++ S F
Sbjct: 155 VEISQYCQRKGIVLPTVYQGVY------NALNRTSEYELVPVLRNYGIKYYTHGSLASGF 208
Query: 158 L 158
L
Sbjct: 209 L 209
>UniRef100_O14206 Hypothetical protein C1B9.03c in chromosome I [Schizosaccharomyces
pombe]
Length = 389
Score = 33.5 bits (75), Expect = 2.4
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 19 ANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQDVNEEDFSRDDS 78
A+QLL + + I +I + + L+ + LYH H+H +++ ++D + S
Sbjct: 276 ASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHKSKEEIKQQDNFHEQS 335
Query: 79 TNNKRKRSRDWNLN 92
K KR ++ + N
Sbjct: 336 RALKEKRKKEQDEN 349
>UniRef100_Q8ZVG2 Valyl-tRNA synthetase [Pyrobaculum aerophilum]
Length = 799
Score = 33.1 bits (74), Expect = 3.1
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 54 HALYHFHLHMPFQD-----VNEEDFSRDDSTNNKRKRSRDWNLNTAWQKLFELRWPDLIN 108
HALY+F H F D V ++R+ + +R+ W L TAW+ +L P
Sbjct: 638 HALYNFIWH-EFADHYIELVKSRAYNREGVFTEEEQRAAIWTLYTAWRYSLKLLAP---- 692
Query: 109 QIQPSDWQKAYWEAHLQNCLDEAAE 133
I P K + EA+ ++ DE E
Sbjct: 693 -IMPFVTDKIWREAYGRSIHDEMIE 716
>UniRef100_UPI00002435B0 UPI00002435B0 UniRef100 entry
Length = 1161
Score = 32.7 bits (73), Expect = 4.0
Identities = 23/64 (35%), Positives = 32/64 (49%), Gaps = 10/64 (15%)
Query: 104 PDLINQIQPSDWQKAY------WEAHLQNCLDEAAEIALISPFKGRLADINISGTMLSCF 157
PD I I P + Q+AY ++ L + L + EIA + F+GR DI I +SC
Sbjct: 775 PDQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIII----MSCV 830
Query: 158 LCNE 161
NE
Sbjct: 831 RANE 834
>UniRef100_Q7PWZ4 ENSANGP00000004153 [Anopheles gambiae str. PEST]
Length = 1120
Score = 32.7 bits (73), Expect = 4.0
Identities = 23/64 (35%), Positives = 32/64 (49%), Gaps = 10/64 (15%)
Query: 104 PDLINQIQPSDWQKAY------WEAHLQNCLDEAAEIALISPFKGRLADINISGTMLSCF 157
PD I I P + Q+AY ++ L + L + EIA + F+GR DI I +SC
Sbjct: 797 PDQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIII----MSCV 852
Query: 158 LCNE 161
NE
Sbjct: 853 RANE 856
>UniRef100_Q6HH66 Hypothetical protein [Bacillus thuringiensis]
Length = 310
Score = 32.3 bits (72), Expect = 5.2
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 53 PHALYHFHLHMPFQDVNEEDFSRDDSTNNKRKRSRDWNLNTAWQKLFELRWPDLINQI 110
P+ L H+ M F+ +N ++ +D T K N A + + +W L+N++
Sbjct: 132 PYDLVHYKNTMKFKHINLSEYHFEDETEENEKIVEGIENNPALENIIPPKWYSLVNEL 189
>UniRef100_UPI000036CB46 UPI000036CB46 UniRef100 entry
Length = 581
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 24 FGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQD 67
FG VI + +Y + H L+D++++L H H H H +D
Sbjct: 481 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESED 524
>UniRef100_UPI000023F000 UPI000023F000 UniRef100 entry
Length = 3880
Score = 32.0 bits (71), Expect = 6.8
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 11 ITLCIDHLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLH 62
+ LC+D+L L D ++A PVI EL + L D L PH HFH H
Sbjct: 852 LELCVDNLTADYL---DPIMA--PVIDELMTALFD----HLKPHPYSHFHAH 894
>UniRef100_Q8L7N3 Hypothetical protein At1g78790 [Arabidopsis thaliana]
Length = 104
Score = 32.0 bits (71), Expect = 6.8
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 105 DLINQIQPSDWQKAYWEAHLQNCLDEA-AEIALISPFKGRLADINISGTMLSCFL 158
DLI+ I W + + E + +D AE+AL + K RLA N + LSC L
Sbjct: 10 DLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKLSCEL 64
>UniRef100_Q7Y5A8 Gp61 DNA primase subunit [Bacteriophage RB69]
Length = 340
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/32 (43%), Positives = 20/32 (61%), Gaps = 1/32 (3%)
Query: 94 AWQKL-FELRWPDLINQIQPSDWQKAYWEAHL 124
+W +L F L WP L+N+IQP ++K E L
Sbjct: 147 SWNRLWFTLEWPKLVNKIQPGTYKKEIPEPRL 178
>UniRef100_Q5RCD4 Hypothetical protein DKFZp459D2032 [Pongo pygmaeus]
Length = 1166
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 24 FGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQD 67
FG VI + +Y + H L+D++++L H H H H +D
Sbjct: 575 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESED 618
>UniRef100_Q5R607 Hypothetical protein DKFZp459D0927 [Pongo pygmaeus]
Length = 1194
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 24 FGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQD 67
FG VI + +Y + H L+D++++L H H H H +D
Sbjct: 603 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESED 646
>UniRef100_Q7Z753 DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform 2 [Homo sapiens]
Length = 1155
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 24 FGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQD 67
FG VI + +Y + H L+D++++L H H H H +D
Sbjct: 564 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESED 607
>UniRef100_O94965 KIAA0890 protein [Homo sapiens]
Length = 1210
Score = 32.0 bits (71), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 24 FGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHMPFQD 67
FG VI + +Y + H L+D++++L H H H H +D
Sbjct: 619 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESED 662
>UniRef100_Q9HEI9 Related to the component Tra1 of the SAGA complex [Neurospora
crassa]
Length = 3940
Score = 32.0 bits (71), Expect = 6.8
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 11 ITLCIDHLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLH 62
+ LC+D+L L D ++A PVI EL + L D L PH HFH H
Sbjct: 881 LELCVDNLTADYL---DPIMA--PVIDELMAALFD----HLKPHPYNHFHAH 923
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.139 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 312,790,628
Number of Sequences: 2790947
Number of extensions: 12809665
Number of successful extensions: 28946
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 28930
Number of HSP's gapped (non-prelim): 25
length of query: 173
length of database: 848,049,833
effective HSP length: 118
effective length of query: 55
effective length of database: 518,718,087
effective search space: 28529494785
effective search space used: 28529494785
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 70 (31.6 bits)
Medicago: description of AC146681.8