BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146664.9 - phase: 0 
         (59 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O24423 E4/E8 binding protein-1 [Lycopersicon esculentum]     46  3e-04
UniRef100_Q9LFE9 Hypothetical protein F5E19_20 [Arabidopsis thal...    44  0.001
UniRef100_Q9M8T1 F13E7.16 protein [Arabidopsis thaliana]               40  0.012
UniRef100_Q7XBZ3 Putative DNA-binding protein [Oryza sativa]           36  0.30
UniRef100_Q8S7M6 Putative DNA-binding protein, 5'-partial [Oryza...    36  0.30
UniRef100_Q9MAS0 F28H19.3 protein [Arabidopsis thaliana]               34  0.87

>UniRef100_O24423 E4/E8 binding protein-1 [Lycopersicon esculentum]
          Length = 460

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 3  HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
          HLS+ AC KV   A+ +  +I   FL K  VWP+SFK++   + +I IYF S
Sbjct: 29 HLSSKACAKVWLAAKEMAEVIYPEFLPKRDVWPKSFKSAKLIDDNIAIYFFS 80


>UniRef100_Q9LFE9 Hypothetical protein F5E19_20 [Arabidopsis thaliana]
          Length = 1280

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 19/52 (36%), Positives = 27/52 (51%)

Query: 3   HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
           HLSTLA P+V E     P   S N + + + WP  F+  GT    I ++F +
Sbjct: 829 HLSTLASPRVAEVVNKFPETFSLNEVPRKSTWPTQFEKLGTKEAHIALFFFA 880


>UniRef100_Q9M8T1 F13E7.16 protein [Arabidopsis thaliana]
          Length = 963

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 16/52 (30%), Positives = 30/52 (56%)

Query: 3   HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
           +LSTLA PKV E  +  P  ++ N + + + WP  F+++G     + ++F +
Sbjct: 692 YLSTLASPKVVEVVKQFPEKVTLNEVPRLSSWPAQFQDTGAKEQHVALFFFA 743


>UniRef100_Q7XBZ3 Putative DNA-binding protein [Oryza sativa]
          Length = 982

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 19/52 (36%), Positives = 26/52 (49%)

Query: 3   HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
           HLST A  KV E  + LP  I    + + + WP  FK    N  +I +YF +
Sbjct: 499 HLSTCASLKVLEIVKQLPQRIQLVEVPRHSSWPLQFKEVKPNEDNIALYFFA 550


>UniRef100_Q8S7M6 Putative DNA-binding protein, 5'-partial [Oryza sativa]
          Length = 948

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 19/52 (36%), Positives = 26/52 (49%)

Query: 3   HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
           HLST A  KV E  + LP  I    + + + WP  FK    N  +I +YF +
Sbjct: 465 HLSTCASLKVLEIVKQLPQRIQLVEVPRHSSWPLQFKEVKPNEDNIALYFFA 516


>UniRef100_Q9MAS0 F28H19.3 protein [Arabidopsis thaliana]
          Length = 419

 Score = 34.3 bits (77), Expect = 0.87
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 1   MGHLSTLACPKVHEEARYLPNMISANFL 28
           + H+S+LACPKVHE A  L   +SA  L
Sbjct: 311 VAHVSSLACPKVHETASSLKGRLSAEIL 338


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.318    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,673,408
Number of Sequences: 2790947
Number of extensions: 3193152
Number of successful extensions: 5710
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 6
length of query: 59
length of database: 848,049,833
effective HSP length: 35
effective length of query: 24
effective length of database: 750,366,688
effective search space: 18008800512
effective search space used: 18008800512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)