BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146664.7 - phase: 0 
         (2305 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 2361  0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                 1659  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   889  0.0
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   770  0.0
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      761  0.0
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]                      708  0.0
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]               708  0.0
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               707  0.0
UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]               705  0.0
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]                      705  0.0
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          703  0.0
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]                 703  0.0
UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]                  702  0.0
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]              701  0.0
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]                  700  0.0
UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]               697  0.0
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]                  696  0.0
UniRef100_Q93Y89 Gag-pol [Oryza sativa]                               694  0.0
UniRef100_Q9SSW6 GAG-POL [Oryza sativa]                               691  0.0
UniRef100_Q7F9R8 OSJNBb0054B09.2 protein [Oryza sativa]               687  0.0

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 2361 bits (6119), Expect = 0.0
 Identities = 1226/2194 (55%), Positives = 1567/2194 (70%), Gaps = 137/2194 (6%)

Query: 186  EERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQNHLTMY 245
            + +  AL +K+  M  + ++   + ++ LV  + IP KFK P F+KY G +CP+ H+  Y
Sbjct: 130  DRKVDALAEKIRAMECQNSLGFDVTNMGLVEGLRIPYKFKAPSFDKYNGTSCPRTHVQAY 189

Query: 246  IRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKG--VTTFEQLAEAFMQQYKYNTYLAP 303
             R++ AY ++  + ++ FQDSL+G +  W+M LK   +  +  L EAF++QYK+N  +AP
Sbjct: 190  YRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKSDSIRCWRDLGEAFLRQYKHNMDMAP 249

Query: 304  SRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIVCAS 363
            SR +LQSL QK  ESFKEYAQR+ + AA+++PP+ EREL+++F  TL   + ++M  C  
Sbjct: 250  SRTQLQSLCQKSNESFKEYAQRWRELAARVQPPMLERELTDMFIGTLQGVFMDRMGSCPF 309

Query: 364  QKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSNGNKKFGNGYPKRNAQEVGMVAHG 423
              F+D+V  G R E   +         +G    V S+ +KK   G P+R   E   V H 
Sbjct: 310  GSFSDVVICGERTESLIK---------TGKIQDVGSSSSKKPFAGAPRRREGETNAVQHR 360

Query: 424  GPQPVYPNHPFVANITPQMTAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPYYPQ 483
              Q         A   P   APQ                 P  QQ    QQ       PQ
Sbjct: 361  RDQNRIEYRQAAAVTIP---APQ-----------------PRQQQQQRVQQ-------PQ 393

Query: 484  QPYQQRPQQQPRPQVPHNQQYQRQQFDPLPMTYGALLPSLLAQNLVQ--TIPPPRIPDSL 541
            Q  QQRP  QPR ++P       ++FD LPM+Y  LLP LL   LV+  T+ PP +   L
Sbjct: 394  QQQQQRP-YQPRQRMPD------RRFDSLPMSYAELLPELLRLGLVELCTMAPPTV---L 443

Query: 542  PRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVAQNNPLPTH-GP 600
            P  Y  ++ C +H GAPGH  E+C AL+ +VQ LI++  + F  P     NNP+P H G 
Sbjct: 444  PPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFA-PVPNVVNNPMPQHGGH 502

Query: 601  AVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICLMDPRGCIQVQND 660
             VN I+  + E  + +V D++T L+ +  ++    +++   E C  C     GC Q++  
Sbjct: 503  RVNNIEGKEAEDLVDNVDDVQTSLLVVKSRLLNEGVYSGCDEDCLGCAESENGCDQLRAG 562

Query: 661  MQGLLNRRELVVTREPESK-DVCVVTPVFR-----ARRPLVINPNSTKPVGTPLVICVPR 714
            +QG+++   L  +R  + +  V  +T  F+      +R +     +  PV  P+ + +  
Sbjct: 563  IQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGHGQRVVSAPATNGTPVTIPVPVTISA 622

Query: 715  PTPTTA--------QKAVPYKYEGTI---------LEPGSET------------TSPVAV 745
            PT   A         +AVP+KY+             +P ++T            T   AV
Sbjct: 623  PTTIVASGRRAVENSRAVPWKYDNAYRSNRRVESQTKPVNQTPVTIGLANRVPATVGPAV 682

Query: 746  DNIAENSRILRSGRIFPTVGPKSVSVPVDEPVKERNA-----GKGKAG--------EQAK 792
            DN+       RSGR+F             +P+++ NA      KGK          ++A 
Sbjct: 683  DNVGGPGGFTRSGRLF-----------APQPLRDNNAEALAKAKGKQAVVEEEPVQKEAP 731

Query: 793  EFDFE-DADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDALRKVLDQAFVDY 851
            E  FE D +E +K+IKKS+Y++VDQL QTP+KISI++LL  S AHR+AL K+L+ A+V  
Sbjct: 732  EGSFEKDVEEFMKMIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQ 791

Query: 852  DVTLGQFESIVGNVTACNSLTFSDEDLPAEGNKHNRALLISVLCRTDSLSNVLIDTGSAL 911
            ++++ Q E ++ NV+  + + F++ DLP EG  HN+AL I++ C+   LS+VL+DTGS+L
Sbjct: 792  EISVNQLEGVMANVSTRHGVGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSL 851

Query: 912  NVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEVDLPISVGPHEFQVTFQVMEIQ 971
            NV+PK  L ++      L  S + VRAFD ++RSV GEV LP+ +GP  F + F VM+IQ
Sbjct: 852  NVLPKQILKKIDVEGFVLTPSDLIVRAFDRSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQ 911

Query: 972  ASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLSAFSVIGGSGSD 1031
             ++SCLLGRPWIH AGAV+STLHQKLK+V  G+++TV GE   L+S+LS+F  +   G  
Sbjct: 912  PAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEI 971

Query: 1032 GPSF-QGFS--AEESVGKIE-----TCMASLKDARRVIQEGKTEGWGQLVELPENKRKEG 1083
              +  Q F   A E V   E       + S K A+ V+  GK EGWG++V+LP  + K G
Sbjct: 972  HETLCQVFETVALEKVAYAEQRKPGVSITSYKQAKEVVDSGKAEGWGKMVDLPVKEDKFG 1031

Query: 1084 IGF---LNSKPGMFDPTRGSFHSAGFI-HDSPETNAILD-----DAPGGVTPVFVTPGGA 1134
            +G+      + G   P+  +F SAG + H         D     D    V P    PGG+
Sbjct: 1032 VGYEPLQAEQNGQAGPS--TFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRP--CAPGGS 1087

Query: 1135 CCNWIAVDIPSVTPCSKLNISESVEHSDPMLSPNFEVPVYEA--VAEEDEEIPNEIKWML 1192
              NW A ++  VT  ++ ++     +   +   +F+ P+Y+A   +EED E+P E+  +L
Sbjct: 1088 INNWTAEEVVQVTLLTESDLMAFTMNGSVIAQYDFDNPIYQAEEESEEDCELPAELVRLL 1147

Query: 1193 EQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDM 1252
            +QE + IQPHQEE+E++NLGTE+  +EIKIGA+L+ S+K+R+IE++REYV+IFAWSY+DM
Sbjct: 1148 KQEERVIQPHQEELEVVNLGTEDATREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDM 1207

Query: 1253 PGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLAN 1312
            PGLD D+V HRLPL+  CP VKQKLRR+ PDMA KIKEEV+KQ DAGFL  + YP W+AN
Sbjct: 1208 PGLDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWMAN 1267

Query: 1313 IVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIR 1372
            IVPVPKKDGK+RMCVDYRDLN+ASPKD+FPLPHIDVLVDNTA+  VFSFMDGFSGYNQI+
Sbjct: 1268 IVPVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIK 1327

Query: 1373 MAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVK 1432
            MAPED EKT+FITPWG FCY VMPFGL NAGATYQR MT +FHDM+HKEIEVYVDDMI K
Sbjct: 1328 MAPEDMEKTTFITPWGTFCYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAK 1387

Query: 1433 SGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIR 1492
            S TEEEH+  L K+F RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+
Sbjct: 1388 SQTEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQ 1447

Query: 1493 EMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKE 1552
            EMP PKTEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRK+Q +KWNDDCQKAFD+IKE
Sbjct: 1448 EMPEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKE 1507

Query: 1553 YLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHVIYYLSKKFTDCESRYS 1612
            YL +PPIL+PPV GRPLIMYL+V E+SMGCVLG+ DE+G+KEH IYYLSKKFTDCE+RYS
Sbjct: 1508 YLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDESGRKEHAIYYLSKKFTDCETRYS 1567

Query: 1613 VLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIE 1672
            +LEKTCCALAWAA+RLR YM+NHTT LISKMDP+KYIFEKPALTGR+ARWQM+L+EYDI+
Sbjct: 1568 LLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQ 1627

Query: 1673 YRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWG 1732
            Y +QKA+KGSIL+++LA QPIEDYQP+ F+FPD+++MYLK KDC EP+  EGPDP+ +W 
Sbjct: 1628 YTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDPDDKWT 1687

Query: 1733 LIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKK 1792
            L+FDGAVN+ G+G+GAVLI PKG H+PF+ARL FD TNN  EYEACIMGIEEAIDLRIK 
Sbjct: 1688 LMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKT 1747

Query: 1793 IVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALAT 1852
            + I+GDSALV+NQ+ G+W T  P LIPYRDY RR+LTFF KV+L+HVPRDENQMADALAT
Sbjct: 1748 LDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMADALAT 1807

Query: 1853 LSSMINVNGHNTVPVINVQFLDRPAYVFVAEA-IDDDKPWYHDIQVFLQTQKYPPGASNK 1911
            LSSMI VN  N VP + V  L+RPAYVF AE+ + D+KPWY+DI+ FL+TQ+YP GAS  
Sbjct: 1808 LSSMIKVNWWNHVPHVAVNRLERPAYVFAAESVVIDEKPWYYDIKNFLKTQEYPEGASKN 1867

Query: 1912 DKKTLRKLSSRFFLN-EDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMA 1970
            DKKTLR+L+  F+LN +DVLYKRNFD VLLRC+D+ EA+ LM E+HEGSFGTH+ GHAMA
Sbjct: 1868 DKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEGSFGTHAGGHAMA 1927

Query: 1971 KKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGR 2030
            KK+LRAGYYW+TM +DC+ +A++CHKCQIYAD++H+PPS LNV++SPWPF+MWGIDMIG+
Sbjct: 1928 KKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPWPFAMWGIDMIGK 1987

Query: 2031 IEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGT 2090
            IEP ASNGHRFILVAIDYFTKWVEAASYAN+TKQVV RFIK  +I RYGVP RIITDNG+
Sbjct: 1988 IEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRYGVPERIITDNGS 2047

Query: 2091 NLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPYA 2150
            NLNN MMKELC DFKI+HHNSSPYRP+MNGAVEAANKNIKKI++KMVVTYKDWHEMLP+A
Sbjct: 2048 NLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVVTYKDWHEMLPFA 2107

Query: 2151 LYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLI 2210
            L+GYRTSVRTSTGATP+SLVYGMEAVLPVEVEIPSLRVL++ +L EAEW ++R+++L+LI
Sbjct: 2108 LHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAEWIRTRFNELSLI 2167

Query: 2211 EEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPY 2270
            EE+R+A +CHGQLYQ RMK+AFD+ V PR ++ GDLVLK I     D RGKWTPNYEGPY
Sbjct: 2168 EERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDNRGKWTPNYEGPY 2227

Query: 2271 VVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            VVK+ FSGGAL+LT MDGE+ P PVNSD VKKYF
Sbjct: 2228 VVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYF 2261


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 1659 bits (4296), Expect = 0.0
 Identities = 901/1763 (51%), Positives = 1178/1763 (66%), Gaps = 143/1763 (8%)

Query: 175  SIMGDDKAI-----DWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVF 229
            S++ +D+ +     + + +  AL +K+  M  + ++   + ++ LV  + IP KFK P F
Sbjct: 115  SLLSEDEDVLGRVDERDRKVDALAEKIRAMECQNSLGFDVTNMGLVEGLRIPYKFKAPSF 174

Query: 230  EKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLK--GVTTFEQL 287
            +KY G +CP+ H+  Y R++ AY ++  + ++ FQDSL+G +  W+M LK   +  ++ L
Sbjct: 175  DKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKRDSIRCWKDL 234

Query: 288  AEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFY 347
             EAF++QYK+N  +APSR +LQSL QK  ESFKEYAQR+ + AA+++PP+ EREL+++F 
Sbjct: 235  GEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRELAARVQPPMLERELTDMFI 294

Query: 348  ETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSNGNKKFGN 407
             TL   + ++M  C    F+D+V  G R E   + G      SS          +KK   
Sbjct: 295  GTLQGVFMDRMGSCPFVSFSDVVICGERTESLIKTGKIQDAGSS---------SSKKPFA 345

Query: 408  GYPKRNAQEVGMVAHGGPQPVYPNHPFVANITPQMTAPQNPNYQPPRPQGPSLYYPPLYQ 467
            G P+R   E   V +   Q         A   P   APQ                 P  Q
Sbjct: 346  GAPRRREGETNAVQYRRDQNRSQRCQVAAVTIP---APQ-----------------PRQQ 385

Query: 468  QPYNPQQLSQPPYYPQQPYQQRPQQQPRPQVPHNQQYQRQQFDPLPMTYGALLPSLLAQN 527
            Q    QQ       PQQ  QQ+   QPR ++P       ++FD LPM+Y  LLP LL   
Sbjct: 386  QQQRVQQ-------PQQQQQQQRPYQPRQRMPD------RRFDSLPMSYAELLPELLRLG 432

Query: 528  LVQ--TIPPPRIPDSLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTD 585
            +V+  T+ PP +   LP  Y  ++ C +H GAPGH  E+C AL+ +VQ LI++K + F  
Sbjct: 433  MVELRTMAPPTV---LPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFA- 488

Query: 586  PDAVAQNNPLPTH-GPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEAC 644
            P     NNP+P H G  VN I+  + E  +++V D++T L+ +  ++    +++   E C
Sbjct: 489  PVPNVVNNPMPQHGGHRVNNIEGKEAEDLVVNVDDVQTSLLVVKGRLLNGGVYSGCDEDC 548

Query: 645  DICLMDPRGCIQVQNDMQGLLNRRELVVTREPESK-DVCVVTPVFR---ARRPLVINPNS 700
              C     GC Q++  +QG+++   L  +R  + +  V  +T  F+    R   V++  +
Sbjct: 549  LGCAESENGCDQLRTGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGRGQRVVSAPA 608

Query: 701  TKPVGTPLVICVP----RPTPTTA--------QKAVPYKYEGTIL--EPGSETTSPV--- 743
            T   GTP+ I VP     PT   A         +AVP+KY+            T PV   
Sbjct: 609  TN--GTPVTISVPVTISAPTTIAASGRRAVENSRAVPWKYDNAYRSNRRAESQTRPVNQA 666

Query: 744  ----------------AVDNIAENSRILRSGRIFPTVGPKSVSVPVDEPVKERNA----- 782
                            AVDN+       RSGR+F             +P+++ NA     
Sbjct: 667  PVTIGLPNRVPATVGPAVDNVGGPGGFTRSGRLF-----------APQPLRDNNAEALAK 715

Query: 783  GKGKAG--------EQAKEFDFE-DADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSS 833
             KGK          ++A E  FE D +E +K+IKKS+Y++VDQL QTP+KISI++LL  S
Sbjct: 716  AKGKQAVVEEEPVQKEAPEGSFEKDVEEFMKIIKKSDYKIVDQLNQTPSKISILSLLLCS 775

Query: 834  GAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLPAEGNKHNRALLISV 893
             AHR+AL K+L+ A+V  ++++ Q E ++ NV+  + + F++ DL  EG  HN+AL I++
Sbjct: 776  EAHRNALLKMLNLAYVPQEISVNQLEGVMANVSTRHGVGFTNLDLTPEGRNHNKALHITM 835

Query: 894  LCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEVDLP 953
             C+   LS+VL+DTGS+LNV+PK  L ++      L  S + VRAFDG++RSV GEV LP
Sbjct: 836  ECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLTPSDLIVRAFDGSKRSVCGEVTLP 895

Query: 954  ISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSGESA 1013
            + +GP  F + F VM+IQ ++SCLLGRPWIH AGAV+STLHQKLK+V  G+++TV GE  
Sbjct: 896  VKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEE 955

Query: 1014 FLISNLSAFSVIGGSGSDGPSF-QGFS--AEESVGKIE-----TCMASLKDARRVIQEGK 1065
             L+S+LS+F  +   G    +  Q F   A E V   E       + S K A+ V+  GK
Sbjct: 956  ILVSHLSSFKYVEVDGEIHETLCQAFETVALEKVAYAEQRKPGASITSYKQAKEVVDSGK 1015

Query: 1066 TEGWGQLVELPENKRKEGIGF---LNSKPGMFDPTRGSFHSAGFI-HDSPETNAILD--- 1118
             EGWG++V LP  + K G+G+      + G   P+  +F SAG + H         D   
Sbjct: 1016 AEGWGKMVYLPVKEDKFGVGYEPLQAEQNGQAGPS--TFTSAGLMNHGDVSATGSEDCDS 1073

Query: 1119 --DAPGGVTPVFVTPGGACCNWIAVDIPSVTPCSKLNISESVEHSDPMLSPNFEVPVYEA 1176
              D    V P    PGG+  NW A ++  VT  ++ ++     ++  M   +F  P+Y+A
Sbjct: 1074 DCDLDNWVRP--CAPGGSINNWTAEEVVQVTLLTESDLMAFTMNNSVMAQYDFGNPIYQA 1131

Query: 1177 --VAEEDEEIPNEIKWMLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSIKKRV 1234
               +EED E+P E+  +L QE + IQPHQEE+E++NLGTE+ K+EIKIGA+L+ S+K+R+
Sbjct: 1132 EEESEEDCELPAELVRLLRQEERVIQPHQEELEVVNLGTEDAKREIKIGAALEDSVKRRL 1191

Query: 1235 IELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRK 1294
            IE++REYV+IFAWSY+DMPGLD D+V HRLPL+  CP VKQKLRR+ PDMA KIKEEV+K
Sbjct: 1192 IEMLREYVEIFAWSYQDMPGLDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQK 1251

Query: 1295 QIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTA 1354
            Q DAGFL  + YP W+ANIVPVPKKDGK+RMCVDYRDLN+ASPKD+FPLPHIDVLVDNTA
Sbjct: 1252 QWDAGFLAVTSYPPWVANIVPVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTA 1311

Query: 1355 KCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIF 1414
            +  VFSFMDGFSGYNQI+MAPED EKT+FITPWG F Y VMPFGL NAGATYQR MT +F
Sbjct: 1312 QSSVFSFMDGFSGYNQIKMAPEDMEKTTFITPWGTFYYKVMPFGLKNAGATYQRAMTTLF 1371

Query: 1415 HDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGF 1474
            HDM+HKEIEVYVDDMI KS TEEEH+  L K+F RLRK+KLRLNPNKCTFGVRSGKLLGF
Sbjct: 1372 HDMMHKEIEVYVDDMIAKSQTEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGF 1431

Query: 1475 IVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKD 1534
            IVS+KGIEVDP KV+AI+EMP PKTEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRK+
Sbjct: 1432 IVSEKGIEVDPAKVKAIQEMPEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKN 1491

Query: 1535 QGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKE 1594
            Q +KWNDDCQKAFD+IKEYL +PPIL PPV GRPLIMYL+V E+SMGCVLGQ DE+G+KE
Sbjct: 1492 QAIKWNDDCQKAFDKIKEYLQKPPILTPPVPGRPLIMYLSVTENSMGCVLGQHDESGRKE 1551

Query: 1595 HVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPA 1654
            H IYYLSKKFTDCE+RYS+LEKTCCALAWAA+RLR YM+NHTT LISKMDP+KYIFEKPA
Sbjct: 1552 HAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPA 1611

Query: 1655 LTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAK 1714
            LTGR+ARWQM+L+EYDI+Y +QKA+KGSIL+++LA QPIEDYQP+ F+FPD+++MYLK K
Sbjct: 1612 LTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVK 1671

Query: 1715 DCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVE 1774
            DC+EP+  EGPDP+ +W L+FDGAVN+ G+G+GAVLI PKG HIPF+ARL FD TNN  E
Sbjct: 1672 DCEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAE 1731

Query: 1775 YEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKV 1834
            YEACIMGIEEAIDLRIK + IYGDSALV+NQ+ G+W T  P LIPYRDY RR+LTFF KV
Sbjct: 1732 YEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKV 1791

Query: 1835 ELHHVPRDENQMADALATLSSMI 1857
             L+HVPRDENQMADALATLSSMI
Sbjct: 1792 RLYHVPRDENQMADALATLSSMI 1814


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  889 bits (2297), Expect = 0.0
 Identities = 483/1159 (41%), Positives = 700/1159 (59%), Gaps = 53/1159 (4%)

Query: 1172 PVYEAVAEEDEEIPNEIKWMLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSIK 1231
            P   A    +EE+  ++   L+Q     QP  +E+  +NLGTE+D + I +   L    +
Sbjct: 1746 PFEVAAVGVEEEL--DVAGALKQLDDGGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEER 1803

Query: 1232 KRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEE 1291
            +     + E+ D FAW+YK+MPGLD  V  H+L + P+  PVKQ  RR  P+   ++  E
Sbjct: 1804 EDYRSFLMEFRDCFAWTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAE 1863

Query: 1292 VRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVD 1351
            V + I+ GF+   +YP+WLANIVPV KK+G++R+CVD+RDLN+A PKD+FPLP  +++VD
Sbjct: 1864 VDRLINVGFIKEIQYPRWLANIVPVEKKNGQVRVCVDFRDLNRACPKDDFPLPITEMVVD 1923

Query: 1352 NTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMT 1411
            +T            SGYNQI+M   D   T+F TP G F Y VMPFGL NAGATYQR M 
Sbjct: 1924 STTG------YGALSGYNQIKMDLLDAFDTAFRTPKGNFYYTVMPFGLKNAGATYQRAMQ 1977

Query: 1412 KIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKL 1471
             +  D+IH  +E YVDDM+VK+   E H E L  +F+RLR+++L++NP KC F V+SG  
Sbjct: 1978 FVLDDLIHHSVECYVDDMVVKTKDHEHHQEDLRIVFERLRRHQLKMNPLKCAFAVQSGVF 2037

Query: 1472 LGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLL 1531
            LGF++  +GIE++P K++AI  MP P+  K +R   G+L YI RFIS+++    P  KL+
Sbjct: 2038 LGFVIRHRGIEIEPKKIKAILNMPPPQELKDLRKLQGKLAYIRRFISNLSGRIQPFSKLM 2097

Query: 1532 RKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETG 1591
            +K     W+++CQ  FD IK YLL PP+L  PV GRPLI+Y+     S+G +L Q ++ G
Sbjct: 2098 KKGTPFVWDEECQNGFDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDEG 2157

Query: 1592 KKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFE 1651
             KE   YYLS+     E  YS +EK C AL +A K+LRHYM+ H   LI++ DPI+Y+  
Sbjct: 2158 -KEVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLS 2216

Query: 1652 KPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYL 1711
            +P LTGR+ +W +L+ EYDI +  QKA+KG  LAE LA  P+ D  P+  + PD+E+   
Sbjct: 2217 QPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTA 2276

Query: 1712 KAKDCDEPVFGEGPDPESEWGLIFDGA----VNVYG-----SGIGAVLITPKGTHIPFT- 1761
            + ++              +W L FDGA    +N  G     +G G V  TP+G  I  + 
Sbjct: 2277 ELQE--------------QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSF 2322

Query: 1762 ARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYR 1821
            + L+ +C+NN  EYEA I G+  A+ + ++ +  +GDS L+I QI   +E R P L+PY 
Sbjct: 2323 SLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYY 2382

Query: 1822 DYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVPVINVQFLDRPAYV-F 1880
              ARRL+  F  +E+ HVPR +N  ADALA L++ +   G N   ++  +    PA +  
Sbjct: 2383 TVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLEL 2442

Query: 1881 VAEAID-------DDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVL 1930
            + E ++       +++ W    Q FL   K+  G+  +D    R+L  R   +     VL
Sbjct: 2443 IPEEVNIIITNSAEEEDWR---QPFLDYFKH--GSLPEDPVERRQLQRRLPSYIYKAGVL 2497

Query: 1931 YKRNF-DGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYN 1989
            YKR++   VLLRCVD+ EA +++ E+H G  G H  G  M   I   GYYW  + ADC  
Sbjct: 2498 YKRSYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLK 2557

Query: 1990 HAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 2049
             AK CH CQI+ +  H PP+ L+     WPF  WGID+IG I P +S GHRFIL A DYF
Sbjct: 2558 TAKTCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYF 2617

Query: 2050 TKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHH 2109
            +KW EA     V    V+ F++ ++I R+GVP+RI +DN     +  +    + +KI+ +
Sbjct: 2618 SKWAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWN 2677

Query: 2110 NSSPYRPQMNGAVEAANKNIKKIIQKMVVTY-KDWHEMLPYALYGYRTSVRTSTGATPFS 2168
             S+ Y PQ NG  EA NK + KI++K V  + +DWH+ L  AL+ YR +VRT T ATP+S
Sbjct: 2678 YSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYS 2737

Query: 2169 LVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRM 2228
            LVYG EAVLP+E+++PSLRV +  EL++ E  + R+ +L+ +EE+R+ AL + +LY+  M
Sbjct: 2738 LVYGNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNM 2797

Query: 2229 KQAFDKGVHPREFKEGDLVLKCIKSF--QPDPRGKWTPNYEGPYVVKRAFSGGALILTNM 2286
             +A+DK V  R F++G+LVL   +        +GK+ P +EGPYV+++A+ GGA  L + 
Sbjct: 2798 VRAYDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDH 2857

Query: 2287 DGEELPRPVNSDAVKKYFV 2305
             G +   P+N   +KKYFV
Sbjct: 2858 QGSQPMPPINGRFLKKYFV 2876



 Score =  117 bits (292), Expect = 5e-24
 Identities = 91/290 (31%), Positives = 136/290 (46%), Gaps = 20/290 (6%)

Query: 755  LRSGRIFPTVGPKSVSVP-VDEPVKERNAGKGKAGEQAKEFDFEDADEVLKLIKKSEYRV 813
            LR G+  P   P    VP VD+P K       KA    +  +  +     K     +Y+V
Sbjct: 1258 LRGGKTLPD--PHKSKVPNVDKPAK-------KASPPGEAPEAPETKTGSKEKPAVDYKV 1308

Query: 814  VDQLLQTPAKISIMALLSSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTACNSLTF 873
            +  L + PA +S+   L      R+AL K L QA   Y+V + +   +  N    N +TF
Sbjct: 1309 LAHLKRIPALLSVYDALMMVPDLREALIKAL-QAPEVYEVDMAKHR-LYDNPLFVNEITF 1366

Query: 874  SDEDLPAEGNKHNRALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSK 933
            +DED   +G  HNR L I     +  L  +LID GSA+N++P  +L +  ++   L    
Sbjct: 1367 ADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLTRAGFTTKDLEPID 1426

Query: 934  VTVRAFDGTRRSVYGEVDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTL 993
            V +  FD   +   G + + I +    F+V F V+E   S+S LLGRPWIH    V STL
Sbjct: 1427 VVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGRPWIHKYRVVPSTL 1486

Query: 994  HQKLKFVSRGKLITVSGESAFLISNLSAFSVIGGSGSDGPSFQGFSAEES 1043
            HQ LKF+        +G    + SN S +++     +D   +  F  EE+
Sbjct: 1487 HQCLKFLDG------NGVQQRITSNFSPYTIQESYHADAKYY--FPVEEN 1528



 Score = 42.0 bits (97), Expect = 0.22
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 524  LAQNLVQTIPPPRIPDSLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTF 583
            L ++    +P PR PD +     P L+C YH+   GH +E C A K+ +Q+ +N K +  
Sbjct: 993  LMEHRALNLPEPRRPDQVTMTDNP-LYCPYHRYI-GHAIEDCIAFKEWLQRAVNEKRINL 1050

Query: 584  TDPDAVAQNNPLPTHGPAVNMI 605
             D DA+   NP      AVNM+
Sbjct: 1051 -DADAI---NP---DYHAVNMV 1065


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  770 bits (1989), Expect = 0.0
 Identities = 425/1101 (38%), Positives = 634/1101 (56%), Gaps = 58/1101 (5%)

Query: 1211 LGTEEDKKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPEC 1270
            L + +D +EI I  ++    +  +IEL++E+ D F W Y +MPG    +VEHRLPLKP  
Sbjct: 524  LMSADDLEEIDISPAIGQG-RHLLIELLKEFRDCFTWEYYEMPGHSRSIVEHRLPLKPGV 582

Query: 1271 PPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYR 1330
             P +Q  RR   DM   +K E+++  DAGF+    Y +W+++IVPV KK+GK+R+C+D+R
Sbjct: 583  RPHQQLPRRCKADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFR 642

Query: 1331 DLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPW--G 1388
             LNKA+PKD +P+   D LVD  +  K+ SFMDG +GYNQI MA ED  KT+F  P   G
Sbjct: 643  YLNKATPKDEYPMLVADQLVDAASGHKILSFMDGNAGYNQIFMAEEDIHKTTFRCPGAIG 702

Query: 1389 AFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQ 1448
             F +VV+ F L +AGATYQR M  I+HD+I   +EVY+DD++VKS   E+H+  L K+F+
Sbjct: 703  LFEWVVITFVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIADLRKVFE 762

Query: 1449 RLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLG 1508
            R RKY L++NP KC FGV +G+ LGF+V ++GIEV    + AI+++  P+ + +++  +G
Sbjct: 763  RTRKYGLKMNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKTELQEMIG 822

Query: 1509 RLNYISRFISHMTATCGPIFKLLR--KDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDG 1566
            ++N++ RFIS ++    P   LLR   DQ   W  + QKA D IKEYL  PP+L+PP  G
Sbjct: 823  KINFVRRFISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKG 882

Query: 1567 RPLIMYLTVLEDSMGCVLGQQDETGKKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAK 1626
             P  +YL+  + S+  VL Q+ E  +KE V++YLS++  + E+RYS +EK C  L ++  
Sbjct: 883  IPFRLYLSAGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCT 940

Query: 1627 RLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAE 1686
            RLRHY++++   +I K D +KY+   P L GRI +W   L+E+D+ Y + KA+KG  +A 
Sbjct: 941  RLRHYLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIAN 1000

Query: 1687 HLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGI 1746
             +             D+ D  +               G      W L FDG+V  +G GI
Sbjct: 1001 FIV------------DYRDDSI---------------GSVEVVPWTLFFDGSVCTHGCGI 1033

Query: 1747 GAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQI 1806
            G V+I+P+G    F   ++   TNN  EYEA + G++   ++    I I GDS LVI+Q+
Sbjct: 1034 GLVIISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQL 1093

Query: 1807 KGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVP 1866
             GE+E ++  LI Y +  + L+  F  V L HV R++N  A+ LA  +S           
Sbjct: 1094 AGEYECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGAS----------- 1142

Query: 1867 VINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFLN 1926
                + + +   + VA    DD  W + +  +LQ        S    + LR  + ++ L 
Sbjct: 1143 --GYKLMIKHVQIEVAVITADD--WRYYVYQYLQDP------SQSASRKLRYKALKYILL 1192

Query: 1927 EDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHAD 1986
            +D LY R  DGVLL+C+   +A+  + E+HEG  GTH   H M   +  AGY+W TM  D
Sbjct: 1193 DDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPTMLED 1252

Query: 1987 CYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAI 2046
            C+ + K C  CQ +      P S +N I  PWPF  WGIDMIG I P +S GH+FILVA 
Sbjct: 1253 CFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFILVAT 1312

Query: 2047 DYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKI 2106
            DYFTKWVEA     V     ++F++ ++I R G+P  I TD G+   ++   +  D   I
Sbjct: 1313 DYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFADSMGI 1372

Query: 2107 QHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTY-KDWHEMLPYALYGYRTSVRTSTGAT 2165
            +  NSSPY  Q NG  EA+NK++ K+I++ +  Y + WH  L  AL+ YR +   S    
Sbjct: 1373 KLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGSIQVP 1432

Query: 2166 PFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQ 2225
            P+ LVY  +A+LP EV I S R  ++ +L+  E+     D+   + + R+ AL      +
Sbjct: 1433 PYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKVIKDK 1492

Query: 2226 SRMKQAFDKGVHPREFKEGDLVLKCIKSF--QPDPRGKWTPNYEGPYVVKRAFSGGALIL 2283
             R+ + ++K V P++F EG+L+ K I     +    GKW+PN+EGP+ + +  S GA +L
Sbjct: 1493 ERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKGAYML 1552

Query: 2284 TNMDGEELPRPVNSDAVKKYF 2304
              +DGE   R +N   +KKY+
Sbjct: 1553 QGLDGEVYDRALNGKYLKKYY 1573



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 41/138 (29%), Positives = 72/138 (51%)

Query: 883  NKHNRALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGT 942
            N+H + L I+       +S +++D G+A+N+MP +T  +L  +   L  + + ++ F G 
Sbjct: 358  NRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGN 417

Query: 943  RRSVYGEVDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSR 1002
                 G +++ ++VG      TF V++ + S+S LLGR WIH    + ST+HQ L     
Sbjct: 418  PSETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQCLIQWQG 477

Query: 1003 GKLITVSGESAFLISNLS 1020
             K+  V  +S   + N S
Sbjct: 478  DKIEIVPADSQLKMENPS 495


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  761 bits (1964), Expect = 0.0
 Identities = 434/1131 (38%), Positives = 644/1131 (56%), Gaps = 54/1131 (4%)

Query: 1194 QERKTIQPHQEEIEI-----INLGTEEDKKEIKIGASLDVSIKKRVIELIREYVDIFAWS 1248
            +E KT     EE E+     +N+   +  + + +GA +  SI+  +I L++     FAWS
Sbjct: 741  KEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWS 800

Query: 1249 YKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQ 1308
             +DM G+DP +  H L + P   PVKQK R+  P+ A  + EEV K + AG ++  +YP+
Sbjct: 801  IEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPE 860

Query: 1309 WLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGY 1368
            WLAN V V KK+GK R+CVDY DLNKA PKD++PLPHID LV+ T+   + SFMD FSGY
Sbjct: 861  WLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGY 920

Query: 1369 NQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDD 1428
            NQI M  +D+EKTSF+T  G +CY VM FGL NAGATYQR + K+  D I + +EVY+DD
Sbjct: 921  NQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDD 980

Query: 1429 MIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKV 1488
            M+VKS   E+HVE+L K F  L  Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++
Sbjct: 981  MLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQI 1040

Query: 1489 RAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFD 1548
            RAI E+P P+  ++V+   GR+  ++RFIS  T  C P + LL++     W+ D ++AF+
Sbjct: 1041 RAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFE 1100

Query: 1549 QIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHVIYYLSKKFTDCE 1608
            ++K+YL  PPILV P  G  L +Y+ V + ++  VL ++D    ++  I+Y SK   + E
Sbjct: 1101 KLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAE 1158

Query: 1609 SRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSE 1668
            +RY V+EK   A+  +A++LR Y  +HT  +++   P++     P+ +GR+ +W + LSE
Sbjct: 1159 TRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSE 1217

Query: 1669 YDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPE 1728
            YDI++R + A+K  +LA+ L   P++                      +  V G   +  
Sbjct: 1218 YDIDFRPRPAMKSQVLADFLIELPLQ--------------------SAERAVSGNRGE-- 1255

Query: 1729 SEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDL 1788
             EW L  DG+ +  GSGIG  L++P    +  + RLRF  TNN+ EYE  I G+  A  +
Sbjct: 1256 -EWSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGM 1314

Query: 1789 RIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMAD 1848
            +I  I  + DS L+  Q+ GE+E ++  +  Y    + +   F   +L  +PR +N  AD
Sbjct: 1315 QITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPAD 1374

Query: 1849 ALATLSSMINVNGHNTVPV--INVQFLDRPAYVFVAEAI--------DDDKPWYHDIQVF 1898
            ALA L+   + +    +PV  I+   +D    V +   I         D   W  +I+ +
Sbjct: 1375 ALAALALTSDSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDY 1434

Query: 1899 LQTQKYPPGASNKDKKTLRKL---SSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEI 1955
            L     P      DK T R+L   ++++ L ++ L K +  G +L C+   E  ++M E 
Sbjct: 1435 LSDGTLP-----SDKWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKET 1489

Query: 1956 HEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVIS 2015
            HEG+ G HS G A+A K+ + G+YW TM +DC     +C +CQ +A  IH P  +L    
Sbjct: 1490 HEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGV 1549

Query: 2016 SPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNNLI 2075
            +P+PF  W +D++G +   AS   RFILV  DYFTKWVEA SYA +    V  F+   +I
Sbjct: 1550 APYPFMRWAMDIVGPM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFII 1607

Query: 2076 SRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNIKKIIQK 2135
             R+G+P  IITDNG+   +   +  C  +KI+ + S+P  PQ NG  EA NK I   ++K
Sbjct: 1608 CRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKK 1667

Query: 2136 MVVTYKD-WHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAEL 2194
             +   K  W + L   L+ YRT+ R++T  TPF+  YGMEA+ P EV   SLR  M  + 
Sbjct: 1668 RLDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKN 1727

Query: 2195 SEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEGDLVL-KCIKS 2253
             E    +   D+L+ +EE R AALC  Q YQ    + +++ VH R F  GDLVL K  ++
Sbjct: 1728 PELN-DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFEN 1786

Query: 2254 FQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
                  GK   N+EG Y V +    G   L  M G  +PR  NS  +K+Y+
Sbjct: 1787 TAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/138 (31%), Positives = 73/138 (52%)

Query: 871  LTFSDEDLPAEGNKHNRALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLR 930
            ++F+D DL      HN  L++ ++     ++ VLIDTGS+++++ K  L  +  ++  ++
Sbjct: 600  ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIK 659

Query: 931  LSKVTVRAFDGTRRSVYGEVDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVT 990
                 +  FDG      G + LPI VG     V F V+   A ++ +LG PWIH   A+ 
Sbjct: 660  PVSKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIP 719

Query: 991  STLHQKLKFVSRGKLITV 1008
            ST HQ +KF +   + T+
Sbjct: 720  STYHQCVKFPTHNGIFTL 737



 Score = 50.8 bits (120), Expect = 5e-04
 Identities = 35/113 (30%), Positives = 49/113 (42%), Gaps = 6/113 (5%)

Query: 230 EKYQGDTCPQNHLTMYI----RRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLK--GVTT 283
           E Y G   P+  LT +     R  +   N        F + LTGPAH WF  LK   + +
Sbjct: 222 ESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSIDS 281

Query: 284 FEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPP 336
           F QL  +F++ Y        S  +L S++Q  KES + +  RF      I  P
Sbjct: 282 FHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVP 334


>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
          Length = 1986

 Score =  708 bits (1828), Expect = 0.0
 Identities = 401/1109 (36%), Positives = 612/1109 (55%), Gaps = 68/1109 (6%)

Query: 1217 KKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQK 1276
            ++EI++ A+ + ++    I  ++   DIFAW   DMPG+  +V+EH L +K +  P+KQ+
Sbjct: 924  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 979

Query: 1277 LRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKAS 1336
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 980  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1039

Query: 1337 PKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMP 1396
            PKD F LP ID +VD+TA C++ SF+D +SGY+QIR+   D  KTSFITP+GA+CYV MP
Sbjct: 1040 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1099

Query: 1397 FGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLR 1456
            FGL NAGATYQR + + F   I + +E YVDD++VK+  +++ +  L + F  +R ++++
Sbjct: 1100 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMK 1159

Query: 1457 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRF 1516
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF
Sbjct: 1160 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1219

Query: 1517 ISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVL 1576
            +S +     P FKLL+K    +W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1220 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1279

Query: 1577 EDSMGCVL-GQQDETG---KKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYM 1632
               +  VL  +++E G   K +  IY++S+   D ++RY  ++K    +    ++L HY 
Sbjct: 1280 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKARYPQVQKLLYGILITTRKLSHYF 1339

Query: 1633 INHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQP 1692
              H+  +++   P+  +       GRIA+W + L   DI ++ + ++K   LA+ +A   
Sbjct: 1340 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1395

Query: 1693 IEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLIT 1752
              ++   + D P +++                      W + FDG+  + G+G G VLI+
Sbjct: 1396 --EWTECQEDTPVEKI--------------------EHWTMHFDGSKRLSGTGAGVVLIS 1433

Query: 1753 PKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWET 1812
            P G  + +   + F  ++N+ EYEA + G+  AI L IK++++ GDS LV+NQ+  EW  
Sbjct: 1434 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1493

Query: 1813 RHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVPV-INVQ 1871
                ++ YR   R+L   F+ +EL HV R  N+ AD LA   S        T P  + V+
Sbjct: 1494 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-----RETAPSDVFVE 1548

Query: 1872 FLDRPAYVFVAEAIDDD--------KPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSR- 1922
             L  P         D D          W      FL +Q+ P     +DK    ++S R 
Sbjct: 1549 HLYTPTVPHKDTTQDADTRNIAMVEADWREPFIRFLTSQELP-----QDKDEAERISRRS 1603

Query: 1923 --FFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYW 1980
              + L+E  LYK++  G+L RCV   E  +L+ +IH G  G H+    +  K  R G++W
Sbjct: 1604 KLYVLHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFW 1663

Query: 1981 ITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHR 2040
             T  +D     + C  CQ +A +IH+P   L  I   WPF++WG+DM+G  + KA  G+ 
Sbjct: 1664 PTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYT 1722

Query: 2041 FILVAIDYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKEL 2100
             + VAID F+KW+EA     +T      F   N++ R+GVPNRIITDNGT     + K+ 
Sbjct: 1723 HLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDF 1781

Query: 2101 CDDFKIQHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKDWHEMLPYALYGYR 2155
            C+DF I+   +S   P  NG VE AN  I      ++  ++      W + LP  L+  R
Sbjct: 1782 CEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLR 1841

Query: 2156 TSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRM 2215
            T+   +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE R 
Sbjct: 1842 TTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVRE 1898

Query: 2216 AALCHGQLYQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPYVVKRA 2275
            AAL     Y   +++  ++ V  R F  GDLVL+ I++ +   R K +P +EGP+++   
Sbjct: 1899 AALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEV 1956

Query: 2276 FSGGALILTNMDGEELPRPVNSDAVKKYF 2304
               G+  L   DG  +    N + +++++
Sbjct: 1957 TRPGSYRLKREDGTLVDNSWNIEHLRRFY 1985



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 31/128 (24%), Positives = 59/128 (45%), Gaps = 5/128 (3%)

Query: 889  LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
            L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 773  LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPL 832

Query: 948  GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRG 1003
            G++ LP++ G  E      ++F+V + + ++  +LG P +    AV    +  +K     
Sbjct: 833  GQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALAKFMAVPHYTYMMMKMPGPR 892

Query: 1004 KLITVSGE 1011
             ++T+  +
Sbjct: 893  GVLTLRSD 900



 Score = 48.1 bits (113), Expect = 0.003
 Identities = 53/221 (23%), Positives = 92/221 (40%), Gaps = 19/221 (8%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 547

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 548 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 600

Query: 392 GGSSGVSSNGNKKFGNGY-----PKRNAQE-VGMVAHGGPQ 426
            G S    N     G G       KR  +E V   AH   Q
Sbjct: 601 SGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQ 641


>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
          Length = 1986

 Score =  708 bits (1827), Expect = 0.0
 Identities = 397/1106 (35%), Positives = 612/1106 (54%), Gaps = 62/1106 (5%)

Query: 1217 KKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQK 1276
            ++EI++ A+ + ++    I  ++   DIFAW   DMPG+  +V+EH L +K +  P+KQ+
Sbjct: 924  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 979

Query: 1277 LRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKAS 1336
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 980  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1039

Query: 1337 PKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMP 1396
            PKD F LP ID +VD+TA C++ SF+D +SGY+QIR+   D  KTSFITP+GA+CYV MP
Sbjct: 1040 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1099

Query: 1397 FGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLR 1456
            FGL NAGATYQR + + F   I + +E YVDD++VK+  +++ +  L + F  +R ++++
Sbjct: 1100 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMK 1159

Query: 1457 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRF 1516
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF
Sbjct: 1160 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1219

Query: 1517 ISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVL 1576
            +S +     P FKLL+K    +W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1220 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1279

Query: 1577 EDSMGCVL-GQQDETG---KKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYM 1632
               +  VL  +++E G   K +  IY++S+   D ++RY  ++K    +    ++L HY 
Sbjct: 1280 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYF 1339

Query: 1633 INHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQP 1692
              H+  +++   P+  +       GRIA+W + L   DI ++ + ++K   LA+ +A   
Sbjct: 1340 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1395

Query: 1693 IEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLIT 1752
              ++   + D P +++                      W + FDG+  + G+G G VLI+
Sbjct: 1396 --EWTECQEDTPVEKI--------------------EHWTMHFDGSKRLSGTGAGVVLIS 1433

Query: 1753 PKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWET 1812
            P G  + +   + F  ++N+ EYEA + G+  AI L IK++++ GDS LV+NQ+  EW  
Sbjct: 1434 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1493

Query: 1813 RHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVN------GHNTVP 1866
                ++ YR   R+L   F+ +EL HV R  N+ AD LA   S            H   P
Sbjct: 1494 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYTP 1553

Query: 1867 VINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSR---F 1923
             +  +   + A       ++ D  W      FL +Q+ P     +DK    ++S R   +
Sbjct: 1554 TVPHKDTTQDADTHDVVMVEAD--WREPFIRFLSSQELP-----QDKDEAERISRRSKLY 1606

Query: 1924 FLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITM 1983
             ++E  LYK++  G+L RCV   E  +L+ +IH G  G H+    +  K  R G++W T 
Sbjct: 1607 VMHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTA 1666

Query: 1984 HADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFIL 2043
             +D     + C  CQ +A +IH+P   L  I   WPF++WG+DM+G  + KA  G+  + 
Sbjct: 1667 VSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLF 1725

Query: 2044 VAIDYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKELCDD 2103
            VAID F+KW+EA     +T      F   N++ R+GVPNRIITDNGT     + K+ C+D
Sbjct: 1726 VAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCED 1784

Query: 2104 FKIQHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKDWHEMLPYALYGYRTSV 2158
            F I+   +S   P  NG VE AN  I      ++  ++      W + LP  L+  RT+ 
Sbjct: 1785 FGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTP 1844

Query: 2159 RTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAAL 2218
              +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE R AAL
Sbjct: 1845 SRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAAL 1901

Query: 2219 CHGQLYQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSG 2278
                 Y   +++  ++ V  R F  GDLVL+ I++ +   R K +P +EGP+++      
Sbjct: 1902 IQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRP 1959

Query: 2279 GALILTNMDGEELPRPVNSDAVKKYF 2304
            G+  L   DG  +    N + +++++
Sbjct: 1960 GSYRLKREDGTLVDNSWNIEHLRRFY 1985



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 19/221 (8%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES +EY +RF ++  +I  
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLREYIRRFSEQRNKISD 547

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 548 ISDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 600

Query: 392 GGSSGVSSNGNKKFGNGY-----PKRNAQE-VGMVAHGGPQ 426
            G S    N     G G       KR  +E V   AH   Q
Sbjct: 601 SGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQ 641


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  707 bits (1824), Expect = 0.0
 Identities = 398/1080 (36%), Positives = 599/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 973  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1032

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+
Sbjct: 1033 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1092

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1093 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1152

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1153 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1212

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1213 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1272

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1273 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1332

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I     + GR
Sbjct: 1333 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREVNGR 1391

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A                      +  +C E
Sbjct: 1392 IAKWALELMSLDISFKPRISIKSQALADFVA----------------------EWTECQE 1429

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                E  +    W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1430 DTPAENME---HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1486

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1487 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRKLEDKFDGLELSH 1546

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S            H   P +  +   + A    A  ++ D  W 
Sbjct: 1547 VLRHNNEAADRLANFGSKREAAPSDVFVEHLYTPTVPHKDTTQVAGTHDAAMVEVD--WR 1604

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + L+E  LYK++  G+L RCV   E  
Sbjct: 1605 EPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGR 1659

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1660 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1719

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1720 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1778

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1779 F-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1837

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1838 LQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1897

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1898 SLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVG 1954

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1955 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2012



 Score = 50.1 bits (118), Expect = 8e-04
 Identities = 46/197 (23%), Positives = 85/197 (42%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 547

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 548 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 600

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 601 SGPSWKQNKGTPATGGG 617



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 774 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 833

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 834 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]
          Length = 1950

 Score =  705 bits (1820), Expect = 0.0
 Identities = 397/1080 (36%), Positives = 597/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 910  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 969

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+
Sbjct: 970  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1029

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1030 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1089

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1090 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1149

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1150 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1209

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPPIL  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1210 AQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1269

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GR
Sbjct: 1270 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1328

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A                      +  +C E
Sbjct: 1329 IAKWALELMSLDISFKPRISIKSQALADFVA----------------------EWTECQE 1366

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                E  +    W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1367 DTPAENME---HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1423

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1424 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1483

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   +        H   P +  +   + A       ++ D  W 
Sbjct: 1484 VLRHNNEAADRLANFGSKREMAPSDVFVEHLYTPTVPHKDTTQDADTHDVALVEAD--WR 1541

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
                 FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1542 EPFIRFLTSQELP-----QDKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSLEEGR 1596

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1597 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1656

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1657 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1715

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1716 F-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1774

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1775 LQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1834

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1835 SLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVG 1891

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1892 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1949



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 711 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 770

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 771 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 825



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 45/197 (22%), Positives = 84/197 (41%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 365 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 424

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 425 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 484

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+ +   AV+ S  
Sbjct: 485 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYTKAEDAVTASKQ 537

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 538 SGPSWKQNKGTPATGGG 554


>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
          Length = 2026

 Score =  705 bits (1819), Expect = 0.0
 Identities = 396/1080 (36%), Positives = 599/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+
Sbjct: 1037 EVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A     ++   + D P +++          
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKM---------- 1440

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                        W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1441 ----------EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   V        H   P +  +   + A       ++ D  W 
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQVAGTHDVAMVEAD--WR 1608

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1609 EPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGR 1663

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1664 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1723

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1724 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAPDF 1782

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1783 F-INIVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERANGMI 1841

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W E LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1842 LQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1901

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1902 SLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVG 1958

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1959 DLVLRKIQTTR--DRHKLSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2016



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 778 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 837

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 838 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892



 Score = 47.4 bits (111), Expect = 0.005
 Identities = 32/124 (25%), Positives = 61/124 (48%), Gaps = 2/124 (1%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 492 LPRGTIGSWAELRDHFIANFQGTFERPGTQFDLYNVVQKSGESLRDYIRRFSEQRNKISD 551

Query: 336 PLDE 339
             D+
Sbjct: 552 ITDD 555


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  703 bits (1815), Expect = 0.0
 Identities = 396/1080 (36%), Positives = 596/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+  MCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1212 ANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDSFRWGPE 1271

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1272 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1331

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GR
Sbjct: 1332 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1390

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A                      +  +C E
Sbjct: 1391 IAKWALELMSLDISFKPRISIKSQALADFVA----------------------EWTECQE 1428

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                E  +    W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1429 DTPAENME---HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1485

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1486 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1545

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S            H   P +  +   + A       ++ D  W 
Sbjct: 1546 VLRHNNEAADRLANFGSKREAAPSDVFVEHLYSPTVPHKDATQAAGAHDVAMVEAD--WR 1603

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + L+E  LYK++  G+L RCV   E  
Sbjct: 1604 EPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGR 1658

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1659 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1718

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1719 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1777

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1778 F-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1836

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1837 LQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFE 1896

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1897 SLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVG 1953

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1954 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2011



 Score = 50.1 bits (118), Expect = 8e-04
 Identities = 46/197 (23%), Positives = 85/197 (42%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 427 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 486

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 487 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 546

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 547 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 599

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 600 SGPSWKQNKGTPATGGG 616



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
          Length = 2017

 Score =  703 bits (1815), Expect = 0.0
 Identities = 397/1080 (36%), Positives = 596/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK  PKD F LP ID +VD+TA C++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFHWGPE 1276

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEDGHVQKVQRPIY 1336

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H   +++   P+  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PLGDILHNREANGR 1395

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A     ++   + D P ++V          
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKV---------- 1440

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                        W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1441 ----------EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   V        H   P +  +   + A       ++ D  W 
Sbjct: 1551 VLRHNNKAADRLANFGSKREVAPSDVFVEHLYAPTVPHKDTTQVAGTHDVAMVEAD--WR 1608

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1609 EPLIRFLTSQELP-----QDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSLEEGR 1663

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1664 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1723

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1724 ELQTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1782

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1783 F-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1841

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W E LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1842 LQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1901

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1902 SLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVG 1958

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1959 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLIDNSWNIEHLRRFY 2016



 Score = 50.1 bits (118), Expect = 8e-04
 Identities = 45/197 (22%), Positives = 85/197 (42%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 278 LK--GVTTFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L    + ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 492 LPRGTIESWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 551

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 552 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 604

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 605 SGPSWKPNKGTPATGGG 621



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 778 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 837

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 838 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]
          Length = 1991

 Score =  702 bits (1813), Expect = 0.0
 Identities = 393/1103 (35%), Positives = 610/1103 (54%), Gaps = 56/1103 (5%)

Query: 1217 KKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQK 1276
            ++EI++ A+ + ++    I  ++   DIFAW   DMPG+  +V+EH L +K +  P+KQ+
Sbjct: 929  REEIRLAATTESAL----ITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQR 984

Query: 1277 LRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKAS 1336
            LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G+ RMCVDY DLNK+ 
Sbjct: 985  LRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSC 1044

Query: 1337 PKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMP 1396
            PKD F LP ID +VD+TA C++ SF+D +SGY+QIR+   D  KTSFITP+GA+CYV MP
Sbjct: 1045 PKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMP 1104

Query: 1397 FGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLR 1456
            FGL NAGATYQR + + F   I + +E YVDD++VK+  +++ +  L + F  +R ++++
Sbjct: 1105 FGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAFRMK 1164

Query: 1457 LNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRF 1516
            LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF
Sbjct: 1165 LNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRF 1224

Query: 1517 ISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVL 1576
            +S +     P FKLL+K    +W  + QKAF+  K+ L +PP+L  P    PL++Y++  
Sbjct: 1225 VSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLYVSAT 1284

Query: 1577 EDSMGCVL-GQQDETG---KKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYM 1632
               +  VL  +++E G   K +  IY++S+   D ++RY  ++K    +    ++L HY 
Sbjct: 1285 SQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYF 1344

Query: 1633 INHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQP 1692
              H+  +++   P+  +       GRIA+W + L   DI ++ + ++K   LA+ +A   
Sbjct: 1345 QGHSVTVVTSF-PLGDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA--- 1400

Query: 1693 IEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLIT 1752
              ++   + D P +++                      W + FDG+  + G+G G VLI+
Sbjct: 1401 --EWTECQEDTPVEKI--------------------EHWTMHFDGSKRLSGTGAGVVLIS 1438

Query: 1753 PKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWET 1812
            P G  + +   + F  ++N+ EYEA + G+  AI L IK++++ GDS LV+NQ+  EW  
Sbjct: 1439 PTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSC 1498

Query: 1813 RHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVN------GHNTVP 1866
                ++ YR   R+L   F+ +EL HV R  N+ AD LA   S            H   P
Sbjct: 1499 IDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYSP 1558

Query: 1867 VINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFLN 1926
             +  +   + A       ++ D  W   +  FL +Q+ P      ++  + + S  + ++
Sbjct: 1559 TVPHKDATQVADTHDIAMVEAD--WREPLIRFLTSQELPQYKDEAER--ISRRSKLYVMH 1614

Query: 1927 EDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHAD 1986
            E  LYK++  G+L RCV   E  +L+ +IH G  G H+    +  K  R G++W T  +D
Sbjct: 1615 EAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSD 1674

Query: 1987 CYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAI 2046
                 + C  CQ +A +IH+P   L  I   WPF++WG+DM+G  + KA  G+  + +AI
Sbjct: 1675 ADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFMAI 1733

Query: 2047 DYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKI 2106
            D F+KW+EA     +T      F   N++ R+GVPNRIITDNGT     + K+ C+DF I
Sbjct: 1734 DKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGI 1792

Query: 2107 QHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTS 2161
            +   +S   P  NG VE AN  I      ++  ++      W   LP  L+  RT+   +
Sbjct: 1793 KICYASVAHPMSNGQVERANGMILQRIKARVFDRLKPYAGKWVSQLPSVLWSLRTTPSRA 1852

Query: 2162 TGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHG 2221
            TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE R AAL   
Sbjct: 1853 TGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQS 1909

Query: 2222 QLYQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGAL 2281
              Y   +++  ++ V  R F  GDLVL+ I++ +   R K +P +EGP+++      G+ 
Sbjct: 1910 ARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSY 1967

Query: 2282 ILTNMDGEELPRPVNSDAVKKYF 2304
             L   DG  +    N + +++++
Sbjct: 1968 RLKREDGTLVDNSWNIEHIRRFY 1990



 Score = 50.8 bits (120), Expect = 5e-04
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 5/128 (3%)

Query: 889  LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
            L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 778  LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPL 837

Query: 948  GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRG 1003
            G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K     
Sbjct: 838  GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 897

Query: 1004 KLITVSGE 1011
             ++T+  +
Sbjct: 898  GVLTLRSD 905



 Score = 49.3 bits (116), Expect = 0.001
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 19/221 (8%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 433 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 492

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES +EY +RF ++  +I  
Sbjct: 493 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLREYIRRFSEQRNKISD 552

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 553 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 605

Query: 392 GGSSGVSSNGNKKFGNGY-----PKRNAQE-VGMVAHGGPQ 426
            G S    N     G G       KR  +E V   AH   Q
Sbjct: 606 SGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSRQ 646


>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
          Length = 2010

 Score =  701 bits (1809), Expect = 0.0
 Identities = 395/1080 (36%), Positives = 597/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 970  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1029

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1030 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGRELLSFL 1089

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1090 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1149

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKL+GF+VS +GI+
Sbjct: 1150 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVSHRGIQ 1209

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1210 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1269

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1270 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1329

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GR
Sbjct: 1330 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1388

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A                      +  +C E
Sbjct: 1389 IAKWALELMSLDISFKPRISIKSQALADFVA----------------------EWTECQE 1426

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                E  +    W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1427 DTPAENME---HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1483

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1484 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1543

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   V        H   P +  +   + A       ++ D  W 
Sbjct: 1544 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQVAGTHDVAMVETD--WR 1601

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1602 EPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGR 1656

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1657 QLLQDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1716

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1717 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1775

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1776 F-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1834

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1835 LQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1894

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1895 SLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVG 1951

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1952 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2009



 Score = 51.6 bits (122), Expect = 3e-04
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 425 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 484

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 485 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 544

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K  +     F        +  E+A+   AV+ S  
Sbjct: 545 ITDDVIIAAFTKGIRHEELVGKFGRKPPMTVKLMFE-------KANEYAKAEDAVTASKQ 597

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 598 SGPSWKQNKGTPATGGG 614



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 771 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPL 830

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 831 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 885


>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
          Length = 1756

 Score =  700 bits (1807), Expect = 0.0
 Identities = 394/1080 (36%), Positives = 597/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 716  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIK 775

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK  PKD F LP ID +VD+TA C++ SF+
Sbjct: 776  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 835

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 836  DCYSGYHQIRLKESDCLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 895

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD+++K+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 896  EAYVDDVVIKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 955

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 956  ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1015

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K++L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY
Sbjct: 1016 AQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1075

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GR
Sbjct: 1076 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1134

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A     ++   + D P +++          
Sbjct: 1135 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKM---------- 1179

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                        W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1180 ----------EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1229

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1230 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1289

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   V        H   P +  +   + A       ++ D  W 
Sbjct: 1290 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQIAGTHDVALVEAD--WR 1347

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
                 FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1348 EPFIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGR 1402

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1403 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1462

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1463 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1521

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1522 F-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1580

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1581 LQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1640

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1641 SLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVG 1697

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1698 DLVLRKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1755



 Score = 50.4 bits (119), Expect = 6e-04
 Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 889  LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
            L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 517  LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 576

Query: 948  GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRG 1003
            G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K     
Sbjct: 577  GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 636

Query: 1004 KLITVSGE 1011
            +++++  +
Sbjct: 637  RVLSLRSD 644



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 224 FKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVT- 282
           FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  GL   T 
Sbjct: 177 FKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGTI 236

Query: 283 -TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERE 341
            ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I    D+  
Sbjct: 237 RSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISDITDDVI 296

Query: 342 LSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGV 397
           ++     + +E L   +  K        F        +  E+A+   AV+ S   G S  
Sbjct: 297 IAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQSGPSWK 349

Query: 398 SSNGNKKFGNG 408
            + G    G G
Sbjct: 350 PNKGTPATGGG 360


>UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]
          Length = 2008

 Score =  697 bits (1798), Expect = 0.0
 Identities = 413/1181 (34%), Positives = 626/1181 (52%), Gaps = 92/1181 (7%)

Query: 1142 DIPSVTPCSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKWMLEQERKTIQP 1201
            DI     C K +    + H+  M S   ++ +  A A E E    +     E E KT + 
Sbjct: 901  DIKQAVTCDKESCD--MAHTHEMASAREDIRLAAATASEGEIPVTKTSKSGESEAKTKK- 957

Query: 1202 HQEEIEIINLGTEEDKKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVE 1261
                   I L   +  K          + +  +I  ++   DIFAW   DMPG+  +V+E
Sbjct: 958  -------IPLDPSDPTK----------TAESALITFLQNNKDIFAWKPSDMPGIPREVIE 1000

Query: 1262 HRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDG 1321
            H L +K +  P+KQ+LRR   D    IKEE+ K + AGF+    +P WLAN V V KK G
Sbjct: 1001 HSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTG 1060

Query: 1322 KIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKT 1381
            + RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+D +SGY+QIR+   D  KT
Sbjct: 1061 QWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKT 1120

Query: 1382 SFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVE 1441
            SFITP+GA+CYV MPFGL NAGATYQR + + F   I + +E YVDD++VK+  +++ + 
Sbjct: 1121 SFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLIS 1180

Query: 1442 YLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEK 1501
             L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K
Sbjct: 1181 DLEETFVSIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQK 1240

Query: 1502 QVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILV 1561
             V+   G +  +SRF+S +     P FKLL+K    +W  + QKAF+  K+ L EPP+L 
Sbjct: 1241 DVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLA 1300

Query: 1562 PPVDGRPLIMYLTVLEDSMGCVLG-QQDETG---KKEHVIYYLSKKFTDCESRYSVLEKT 1617
             P    PL++Y++     +  VL  +++E G   K +  IY++S+   D ++RY  ++K 
Sbjct: 1301 SPHPQEPLLLYVSATSQVVSTVLAVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQK- 1359

Query: 1618 CCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQK 1677
                          +  H+  +++   P+  I       GRIA+W + L   DI ++ + 
Sbjct: 1360 -------------LLYGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDISFKPRI 1405

Query: 1678 AVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDG 1737
            ++K   LA+ +A                      +  +C E    E  +    W + FDG
Sbjct: 1406 SIKSQALADFVA----------------------EWTECQEDTPAENME---HWTMHFDG 1440

Query: 1738 AVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYG 1797
            +  + G+G G VLI+P G  + +   + F  ++N+ EYEA + G+  AI L IK++++ G
Sbjct: 1441 SKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRG 1500

Query: 1798 DSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMI 1857
            DS LV+NQ+  EW      ++ YR   R+L   F+ +EL HV R  N+ AD LA   S  
Sbjct: 1501 DSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKR 1560

Query: 1858 NVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNK 1911
             V        H   P +  +   + A       ++ D  W   +  FL +Q+ P     +
Sbjct: 1561 EVAPSDVFVEHLYTPTVPHKDTTQVAGTHDVAVVETD--WREPLIRFLTSQELP-----Q 1613

Query: 1912 DKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHA 1968
            DK    ++S R   + ++E  LYK++  G+L RCV   E  +L+ +IH G  G H+    
Sbjct: 1614 DKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAART 1673

Query: 1969 MAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMI 2028
            +  K  R G++W T  +D     + C  CQ +A +IH+P   L  I   WPF++WG+DM+
Sbjct: 1674 IVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMV 1733

Query: 2029 GRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDN 2088
            G  + KA  G+  + VAID F+KW+EA     +T      F   N++ R+GVPNRIITDN
Sbjct: 1734 GPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDN 1791

Query: 2089 GTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI-----KKIIQKMVVTYKDW 2143
            GT     + K+ C+DF I+   +S   P  NG VE AN  I      ++  ++      W
Sbjct: 1792 GTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKW 1851

Query: 2144 HEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSR 2203
             + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  SLR        E  + + R
Sbjct: 1852 VQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDR 1908

Query: 2204 YDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWT 2263
             D L+ +EE R AAL     Y   +++  ++ V  R F  GDLVL+ I++ +   R K +
Sbjct: 1909 VDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTR--DRHKLS 1966

Query: 2264 PNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1967 PLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2007



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 774 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 833

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 834 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P + LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 428 VDWPAGFKPTGIEKYDGTTNPGSWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHG 487

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 488 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 547

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 548 ITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFE-------KANEYAKAEDAVTASKQ 600

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 601 SGPSWKQNKGTPATGGG 617


>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
          Length = 2001

 Score =  696 bits (1797), Expect = 0.0
 Identities = 394/1101 (35%), Positives = 612/1101 (54%), Gaps = 50/1101 (4%)

Query: 1209 INLGTEEDKKEIKIGASLDVSIKKRVIELIREYVDIFAWSYKDMPGLDPDVVEHRLPLKP 1268
            + L      K I IG +L+  I++ ++++++E + +FAWS  ++ G+D  ++EH L +K 
Sbjct: 945  VQLDEHNPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIEHNLAIKS 1004

Query: 1269 ECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKIRMCVD 1328
               P KQKLRR   D     K E+ K + A  +    +P+WLAN V V K +GK RMC+D
Sbjct: 1005 GYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCID 1064

Query: 1329 YRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWG 1388
            + DLNKA PKD+FPLP ID LVD TA C++ SF+D +SGY+Q+ M  ED EKTSFITP+G
Sbjct: 1065 FTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFG 1124

Query: 1389 AFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVEYLLKMFQ 1448
             +C++ MPFGL NAGAT+ R + K+    + + +E Y+DD++VKS     H + L + F+
Sbjct: 1125 TYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQAFTHGKDLQETFE 1184

Query: 1449 RLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLG 1508
             LRK  ++LNP KC FGVR+GKLLGF+VS++GIE +PDK+ AI +M  PK  ++V+   G
Sbjct: 1185 NLRKCSVKLNPEKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPKNTREVQRLTG 1244

Query: 1509 RLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRP 1568
            R+  +SRF+S       P FK LR     +W  +CQ+AFD +K+YL E P L  P  G+P
Sbjct: 1245 RMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQP 1304

Query: 1569 LIMYLTVLEDSMGCVLGQQDETGKKEHVIYYLSKKFTDCESRYSVLEKTCCALAWAAKRL 1628
            L+MY+     ++  VL Q++E   ++  +Y++S+     ++RYS +EK   A+  A+++L
Sbjct: 1305 LLMYVAATPATVSAVLVQEEE--NRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKL 1362

Query: 1629 RHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHL 1688
            RHY ++H   + S   PI  +     + GRIA+W M L  +D++Y ++ A+K  +LA+ +
Sbjct: 1363 RHYFLSHDITIPSAY-PIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFV 1421

Query: 1689 AHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGA 1748
            A     ++ P + +                    +  + +  W +  DGA N  G+G  A
Sbjct: 1422 A-----EWTPNEVE--------------------QQEEVKKPWIVFSDGACNAAGAGAAA 1456

Query: 1749 VLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKG 1808
            V+ TP    + ++ +L F  TNN  EYE  ++ + +A  L  +++++  DS LV      
Sbjct: 1457 VVKTPMKQTLKYSVQLVFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSK 1516

Query: 1809 EWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVPVI 1868
             +E +   +  Y + AR     F  + +  + R+EN  AD LA  ++          P+ 
Sbjct: 1517 SFEAKEETMAKYLEEARLNEKHFLGITVKAITREENGEADELAKAAA-------TGQPLE 1569

Query: 1869 NVQF--LDRPAYVFVAEA-IDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFL 1925
            N  F  + +P+Y     A I  +  W   I  +L + + P     ++ K ++ +S ++ +
Sbjct: 1570 NSFFDIITQPSYEKKEVACIQREGDWREPILKYLVSAQLP--EKEEEAKRIQLMSKKYKV 1627

Query: 1926 NEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHA 1985
             E  LYK      LL+CV + E  K++ EIHEG  G H    ++A K++R G YW T+  
Sbjct: 1628 VEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPWSVASKVIRQGIYWPTIMK 1687

Query: 1986 DCYNHAKRCHKCQIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVA 2045
            D   + K C  CQ +      PP  L  I   WPF  WGID++G + P+A    RF++VA
Sbjct: 1688 DTEKYIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPL-PRAKGDLRFVIVA 1746

Query: 2046 IDYFTKWVEAASYANVTKQVVVRFIKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFK 2105
            I+YF++W+EA + A +T   V +F+  N+I R+G+P  I+ DNG    +   +++C    
Sbjct: 1747 IEYFSRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLN 1806

Query: 2106 IQHHNSSPYRPQMNGAVEAANKNIKKIIQKMV--VTYKDWHEMLPYALYGYRTSVRTSTG 2163
            +Q + +S   PQ NG VE AN  I + I+K +       W E L   L+  RT+V  STG
Sbjct: 1807 LQINFASVGHPQTNGVVERANGKIMEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTG 1866

Query: 2164 ATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQL 2223
             TPF LVYG EA+ P EV   S R++ + +  E      R   L +++E R+ AL     
Sbjct: 1867 MTPFRLVYGDEAMTPSEVGAHSPRMIFDQKDEE-----GREITLEMLDEIRVEALEKMAS 1921

Query: 2224 YQSRMKQAFDKGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALIL 2283
            Y    K  +++ V  R  +EGDLVLK  K       GK    +EGP++VK+    GA  L
Sbjct: 1922 YTEGTKSYYNQKVKTRPIEEGDLVLK--KVLNEVAVGKLESKWEGPFIVKKKTETGAFKL 1979

Query: 2284 TNMDGEELPRPVNSDAVKKYF 2304
              +DGEEL    N+ ++KK++
Sbjct: 1980 AYLDGEELKHTWNAVSLKKFY 2000



 Score = 46.2 bits (108), Expect = 0.012
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 871  LTFSDEDLPAEGNKHNRALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLR 930
            ++F  ED       H   L++SV      +  VLID GS+ +V+      ++   E  L 
Sbjct: 758  ISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLT 817

Query: 931  LSKVTVRAFDGTRRSVYGEVDLPISVGP----HEFQVTFQVMEIQASFSCLLGRPWIHDA 986
             + V ++ F G +    G++ L +  G      + ++ F V+++   ++ +LGR  I+  
Sbjct: 818  NAGVPLQGFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIF 877

Query: 987  GAVTSTLHQKLKFVSRGKLITVSGE 1011
             A+    +  +K      +ITV GE
Sbjct: 878  EAIIHHNYICMKLPGLRGVITVRGE 902



 Score = 38.1 bits (87), Expect = 3.2
 Identities = 30/122 (24%), Positives = 53/122 (42%), Gaps = 4/122 (3%)

Query: 221 PPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKG 280
           P  FK+    KY+GDT P  +L +Y   + A   +           L G A +W+  +  
Sbjct: 353 PINFKLSNITKYKGDTDPNEYLRVYETAVEAAGGDDTTKAKILPTMLEGVALSWYTTIPP 412

Query: 281 VT--TFEQLAEAFMQQYKYNTYLAPSR-KELQSLTQKDKESFKEYAQRFIQKAAQIRPPL 337
           +T  ++E + + F   +    Y  P    +L ++ Q   E+ + +  +F +   QIR   
Sbjct: 413 MTIYSWEHMRDTFRAGF-IGAYEEPKEADDLYAMKQLPGETLRSFIVKFSRVRCQIRHVD 471

Query: 338 DE 339
           DE
Sbjct: 472 DE 473


>UniRef100_Q93Y89 Gag-pol [Oryza sativa]
          Length = 2017

 Score =  694 bits (1791), Expect = 0.0
 Identities = 392/1080 (36%), Positives = 596/1080 (54%), Gaps = 58/1080 (5%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLN + PKD F LP ID +VD+TA C++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D + GY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1097 DCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+K+ AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  D
Sbjct: 1217 ANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPD 1276

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIY 1598
             QKAF+  K+ L EPP+L  P    PL++Y+      +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1599 YLSKKFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGR 1658
            ++S+   D ++RY  ++K    +    ++L HY  +H+  +++    +  I       GR
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTSFS-LGDILHNREANGR 1395

Query: 1659 IARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDE 1718
            IA+W + L   DI ++ + ++K   LA+ +A     ++   + D P +++          
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKM---------- 1440

Query: 1719 PVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEAC 1778
                        W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA 
Sbjct: 1441 ----------EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1779 IMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHH 1838
            + G+  AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1839 VPRDENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWY 1892
            V R  N+ AD LA   S   V        H   P +  +   + A       ++ D  W 
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQIAGTHDVALVEAD--WR 1608

Query: 1893 HDIQVFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAE 1949
              +  FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  
Sbjct: 1609 EPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGR 1663

Query: 1950 KLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPS 2009
            +L+ +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P  
Sbjct: 1664 QLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQ 1723

Query: 2010 MLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRF 2069
             L  I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F
Sbjct: 1724 ELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDF 1782

Query: 2070 IKNNLISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI 2129
               N++ R+GVPNRIITDNG      + K+ C+DF I+   +S   P  NG VE AN  I
Sbjct: 1783 F-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMI 1841

Query: 2130 -----KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIP 2184
                  ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  
Sbjct: 1842 LQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFE 1901

Query: 2185 SLRVLMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEG 2244
            SLR        E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  G
Sbjct: 1902 SLRF---RNYREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVG 1958

Query: 2245 DLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            DLVL+ I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1959 DLVLRKIQTTR--DRHKLSPLWEGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 2016



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 46/197 (23%), Positives = 85/197 (42%), Gaps = 13/197 (6%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 432 VDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAMANYLPVALADSARSWLHG 491

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 492 LPRGTIGSWAELRDHFIANFQGTFEHPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 551

Query: 336 PLDERELSE----LFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARKGAAVSGSSS 391
             D+  ++     + +E L   +  K        F        +  E+A+   AV+ S  
Sbjct: 552 ITDDVIIAAFTKGIRHEELVGKFGRKPPKTVKLMFE-------KANEYAKAEDAVTASKQ 604

Query: 392 GGSSGVSSNGNKKFGNG 408
            G S   + G    G G
Sbjct: 605 SGPSWKPNKGTPAKGGG 621



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 778 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 837

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 838 GQITLPVTFGTRENFRTENISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q9SSW6 GAG-POL [Oryza sativa]
          Length = 1032

 Score =  691 bits (1782), Expect = 0.0
 Identities = 389/1071 (36%), Positives = 593/1071 (55%), Gaps = 58/1071 (5%)

Query: 1252 MPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLVTSEYPQWLA 1311
            MPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+    +P WLA
Sbjct: 1    MPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLA 60

Query: 1312 NIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQI 1371
            N V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+D +SGY+QI
Sbjct: 61   NPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQI 120

Query: 1372 RMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIV 1431
            R+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +E YVDD++V
Sbjct: 121  RLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVV 180

Query: 1432 KSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1491
            K+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI
Sbjct: 181  KTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAI 240

Query: 1492 REMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIK 1551
              M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  + QKAF+  K
Sbjct: 241  LNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFK 300

Query: 1552 EYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVL-GQQDETG---KKEHVIYYLSKKFTDC 1607
            + L EPP+L  P    PL++Y++     +  VL  +++E G   K +  IY++S+   D 
Sbjct: 301  KLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADS 360

Query: 1608 ESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLS 1667
            ++RY  ++K    +    ++L HY   H+  +++   P+  I       GRIA+W + L 
Sbjct: 361  KTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELM 419

Query: 1668 EYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFGEGPDP 1727
              DI ++ + ++K   LA+ +A     ++   + D P +++                   
Sbjct: 420  SLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKM------------------- 455

Query: 1728 ESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGIEEAID 1787
               W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA + G+  AI 
Sbjct: 456  -EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSTSHNVAEYEALLHGLRIAIS 514

Query: 1788 LRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMA 1847
            L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL HV R  N+ A
Sbjct: 515  LGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAA 574

Query: 1848 DALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQT 1901
            D LA   S            H   P +  +   + A       ++ D  W   +  FL +
Sbjct: 575  DRLANFGSKREAAPSDVFVEHLYTPTVPHKDTTQVADTHDIAMVEAD--WREPLIRFLTS 632

Query: 1902 QKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAEKLMCEIHEG 1958
            Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  +L+ +IH G
Sbjct: 633  QELP-----RDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSG 687

Query: 1959 SFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSPW 2018
              G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P   L  I   W
Sbjct: 688  ICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSW 747

Query: 2019 PFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNNLISRY 2078
            PF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   N++ R+
Sbjct: 748  PFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRF 805

Query: 2079 GVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI-----KKII 2133
            GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I      ++ 
Sbjct: 806  GVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVF 865

Query: 2134 QKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAE 2193
             ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  SLR      
Sbjct: 866  DRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RN 922

Query: 2194 LSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEGDLVLKCIKS 2253
              E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  GDLVL+ I++
Sbjct: 923  FREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQT 982

Query: 2254 FQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
             +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 983  TR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1031


>UniRef100_Q7F9R8 OSJNBb0054B09.2 protein [Oryza sativa]
          Length = 1992

 Score =  687 bits (1773), Expect = 0.0
 Identities = 388/1076 (36%), Positives = 591/1076 (54%), Gaps = 70/1076 (6%)

Query: 1243 DIFAWSYKDMPGLDPDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLV 1302
            DIFAW   DMPG+  +V+EH L +K +  P+KQ+LRR   D    IKEE+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1303 TSEYPQWLANIVPVPKKDGKIRMCVDYRDLNKASPKDNFPLPHIDVLVDNTAKCKVFSFM 1362
               +P WLAN V V KK G+ RMCVDY DLNK+ PKD F LP ID +VD+TA C++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1363 DGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQRGMTKIFHDMIHKEI 1422
            D +SGY+QIR+   D  KTSFITP+GA+CYV MPFGL NAGATYQR + + F   I + +
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1423 EVYVDDMIVKSGTEEEHVEYLLKMFQRLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1482
            E YVDD++VK+  +++ +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1483 VDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGVKWNDD 1542
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K    +W  +
Sbjct: 1212 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1271

Query: 1543 CQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHVIYYLSK 1602
             QKAF+  K++L EPP+          +  + V+E        ++    K +  IY++S+
Sbjct: 1272 AQKAFEDFKKFLTEPPV----------VSTVLVVERE------EEGHVQKVQRPIYFVSE 1315

Query: 1603 KFTDCESRYSVLEKTCCALAWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARW 1662
               D ++RY  ++K    +    ++L HY   H+  +++   P+  I       GRIA+W
Sbjct: 1316 VLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKW 1374

Query: 1663 QMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDKEVMYLKAKDCDEPVFG 1722
             + L   DI ++ + ++K   LA+ +A     ++   + D P +++              
Sbjct: 1375 ALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKM-------------- 1415

Query: 1723 EGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARLRFDCTNNIVEYEACIMGI 1782
                    W + FDG+  + G+G G VLI+P G  + +   + F  ++N+ EYEA + G+
Sbjct: 1416 ------EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGL 1469

Query: 1783 EEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRD 1842
              AI L IK++++ GDS LV+NQ+  EW      ++ YR   R+L   F+ +EL HV R 
Sbjct: 1470 RIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRH 1529

Query: 1843 ENQMADALATLSSMINVN------GHNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQ 1896
             N+ AD LA   S   +        H   P +  +   + A       ++ D  W   + 
Sbjct: 1530 NNEAADRLANFGSKREMAPSDVFVEHLYAPTVPHKDTTQVAGTHDVAMVEAD--WREPLI 1587

Query: 1897 VFLQTQKYPPGASNKDKKTLRKLSSR---FFLNEDVLYKRNFDGVLLRCVDKHEAEKLMC 1953
             FL +Q+ P     +DK    ++S R   + ++E  LYK++  G+L RCV   E  +L+ 
Sbjct: 1588 RFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLK 1642

Query: 1954 EIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNV 2013
            +IH G  G H+    +  K  R G++W T  +D     + C  CQ +A +IH+P   L  
Sbjct: 1643 DIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQT 1702

Query: 2014 ISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVRFIKNN 2073
            I   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   N
Sbjct: 1703 IPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-IN 1760

Query: 2074 LISRYGVPNRIITDNGTNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNI---- 2129
            ++ R+GVPNRIITDNGT     + K+ C+DF I+   +S   P  NG VE AN  I    
Sbjct: 1761 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGI 1820

Query: 2130 -KKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRV 2188
              ++  ++      W + LP  L+  RT+   +TG +PF LVYG EA+LP EVE  SLR 
Sbjct: 1821 KARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF 1880

Query: 2189 LMEAELSEAEWCQSRYDQLNLIEEKRMAALCHGQLYQSRMKQAFDKGVHPREFKEGDLVL 2248
                   E  + + R D L+ +EE R AAL     Y   +++  ++ V  R F  GDLVL
Sbjct: 1881 ---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 1937

Query: 2249 KCIKSFQPDPRGKWTPNYEGPYVVKRAFSGGALILTNMDGEELPRPVNSDAVKKYF 2304
            + I++ +   R K +P +EGP+++      G+  L   DG  +    N + +++++
Sbjct: 1938 RKIQTTR--DRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFY 1991



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 31/115 (26%), Positives = 55/115 (46%), Gaps = 5/115 (4%)

Query: 889 LLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVR-AFDGTRRSVY 947
           L++  + R   L   LID GSALN++   TLD +    + L+ S         G   +  
Sbjct: 773 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL 832

Query: 948 GEVDLPISVGPHE----FQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLK 998
           G++ LP++ G  E      ++F+V + + ++  +LGRP +    AV    +  +K
Sbjct: 833 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887



 Score = 47.4 bits (111), Expect = 0.005
 Identities = 32/124 (25%), Positives = 61/124 (48%), Gaps = 2/124 (1%)

Query: 218 VNIPPKFKMPVFEKYQGDTCPQNHLTMYIRRMIAYKNNVPLLIHCFQDSLTGPAHTWFMG 277
           V+ P  FK    EKY G T P++ LT+Y   + A   +   + +    +L   A +W  G
Sbjct: 427 VDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAVGGDSKAMANYLPVALEDSARSWLHG 486

Query: 278 LKGVT--TFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRP 335
           L   T  ++ +L + F+  ++       ++ +L ++ QK  ES ++Y +RF ++  +I  
Sbjct: 487 LPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISD 546

Query: 336 PLDE 339
             D+
Sbjct: 547 ITDD 550


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,083,082,606
Number of Sequences: 2790947
Number of extensions: 188789592
Number of successful extensions: 745659
Number of sequences better than 10.0: 32826
Number of HSP's better than 10.0 without gapping: 5049
Number of HSP's successfully gapped in prelim test: 28072
Number of HSP's that attempted gapping in prelim test: 630817
Number of HSP's gapped (non-prelim): 64903
length of query: 2305
length of database: 848,049,833
effective HSP length: 144
effective length of query: 2161
effective length of database: 446,153,465
effective search space: 964137637865
effective search space used: 964137637865
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)