BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146649.7 - phase: 0 /pseudo
(859 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana] 140 2e-31
UniRef100_Q69F85 Gag-pol polyprotein [Phaseolus vulgaris] 130 2e-28
UniRef100_Q850U0 Putative polyprotein [Oryza sativa] 126 3e-27
UniRef100_Q851T8 Putative polyprotein [Oryza sativa] 124 9e-27
UniRef100_Q6UUP0 Putative polyprotein [Oryza sativa] 124 2e-26
UniRef100_Q75IH6 Putative polyprotein [Oryza sativa] 123 2e-26
UniRef100_Q8S636 Putative polyprotein [Oryza sativa] 122 3e-26
UniRef100_Q7Y1N5 Putative polyprotein [Oryza sativa] 122 3e-26
UniRef100_Q7XXG9 OSJNBb0016B03.14 protein [Oryza sativa] 122 5e-26
UniRef100_Q94HQ3 Putative retroelement [Oryza sativa] 122 6e-26
UniRef100_Q8S664 Putative retroelement [Oryza sativa] 122 6e-26
UniRef100_Q851C2 Putative polyprotein [Oryza sativa] 120 2e-25
UniRef100_Q8H7Z4 Putative polyprotein [Oryza sativa] 120 2e-25
UniRef100_Q9AXC3 Hypothetical protein [Antirrhinum hispanicum] 120 2e-25
UniRef100_Q6I5B8 Putative polyprotein [Oryza sativa] 119 4e-25
UniRef100_Q84SR2 Putative GAG-POL [Oryza sativa] 119 5e-25
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa] 117 1e-24
UniRef100_Q75G47 Putative polyprotein [Oryza sativa] 117 2e-24
UniRef100_Q7XK85 OSJNBb0046K02.14 protein [Oryza sativa] 116 3e-24
UniRef100_Q7XSE2 OSJNBb0033G08.12 protein [Oryza sativa] 116 3e-24
>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 140 bits (353), Expect = 2e-31
Identities = 70/152 (46%), Positives = 102/152 (67%)
Query: 707 RQMPSIYGTPYSPKKKCIQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEK 766
+Q+ +I P + +Q L G + +L RF+++S LPF+NLLK+ +F+W + E+
Sbjct: 1038 KQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEE 1097
Query: 767 ALQHLKNSLSAPPVLSRPDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGP 826
A + LK+ LS PP+L +P+ GETLYLY++VS AVS L E + Q+P ++TSK+L+
Sbjct: 1098 AFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEA 1157
Query: 827 ETRYQKIEKVALALVTAARTH*KYFMAHTIAV 858
ETRY IEK ALA+VT+AR YF +HTIAV
Sbjct: 1158 ETRYPVIEKAALAVVTSARKLRPYFQSHTIAV 1189
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/103 (41%), Positives = 59/103 (56%)
Query: 437 DPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVACHQLTVSPSASVVA 496
DPT+C +G I R LIA L N+ FA SI DM IDP++ H+L V P+ V
Sbjct: 767 DPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVK 826
Query: 497 QRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
Q+R+K PE+A + V+ L + I E KY WL+N ++VK
Sbjct: 827 QKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVK 869
>UniRef100_Q69F85 Gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 130 bits (327), Expect = 2e-28
Identities = 72/143 (50%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Query: 718 SPKK-KCIQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLS 776
SPK K IQ L LTSL RFV K A+ P LLKK +KFEWT+ECE+ Q LK L+
Sbjct: 1125 SPKGLKEIQRLVSRLTSLSRFVPKLAERTRPIIKLLKKTSKFEWTDECEQNFQQLKAFLA 1184
Query: 777 APPVLSRPDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKV 836
+PPV+ +P+ E + +YL+VS+EAVS L E + ++P YF S+ L ETRYQ +EKV
Sbjct: 1185 SPPVIQKPNAREPIVVYLAVSNEAVSSALVQEIKAEERPVYFVSRVLHDAETRYQMVEKV 1244
Query: 837 ALALVTAARTH*KYFMAHTIAVR 859
A ALV AR YF H + VR
Sbjct: 1245 AFALVITARRMRMYFQNHKVIVR 1267
Score = 84.0 bits (206), Expect = 2e-14
Identities = 64/243 (26%), Positives = 107/243 (43%), Gaps = 11/243 (4%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
GD +KTI I +L++ YN ++G + +L A+ T HL +K+ + I T++ D
Sbjct: 708 GDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGDIATVHID 767
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRS----RSTLHKVIVERAE 419
+ A C++ P + + E E G +R S H V + +
Sbjct: 768 QKTARECYVASLKVE----PTRRLYTTSAERTTERRGRSTERRSRGRESRRHLVALVDLD 823
Query: 420 EGKQGPTQRGNTSP---FGDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPD 476
P F D + +G + R + L N DLFA + DMP
Sbjct: 824 PRLDDPRMEAGEDLQPIFLRDKDRKTYMGTSLKPDDRETIGKTLTKNADLFAWTAADMPG 883
Query: 477 IDPSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNIL 536
+ V H+L+V A +AQ+++K E+ + + L + FI +A YTTWL+N++
Sbjct: 884 VKSDVITHRLSVYTEARPIAQKKRKLGEERRKAAREETDKLIQAGFIQKAHYTTWLANVV 943
Query: 537 LVK 539
+VK
Sbjct: 944 MVK 946
Score = 54.3 bits (129), Expect = 2e-05
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 36 RQGKGPGGRFT*YIPFSMSREKILVEISVAELKDAGVKPPKAHSQEKRRVDKTKYCRFYK 95
R +GP RF Y P + R K+L E EL P SQ D +K C++++
Sbjct: 416 RPNRGP--RFHNYTPLIVPRGKVLDEALQIELI-----PTLRPSQTPPNADTSKRCQYHR 468
Query: 96 CHGHVTDHCIHLKDAIKMLIQ*GRLN*FTKNSETERQAVKLKTDGKEKN 144
+GH T+ C LKD I+ L+Q G L F K + T ++ + D +E++
Sbjct: 469 NYGHTTEGCQALKDKIEELVQAGHLRKFVKTTITAPRSPQRDHDPRERS 517
>UniRef100_Q850U0 Putative polyprotein [Oryza sativa]
Length = 1535
Score = 126 bits (316), Expect = 3e-27
Identities = 66/135 (48%), Positives = 85/135 (62%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PPVL
Sbjct: 943 VQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDKLKQYLQSPPVLIS 1002
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 1003 PPLGSELLLYLAASPVAVSAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 1062
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 1063 SRKLKHYFQAHKVIV 1077
>UniRef100_Q851T8 Putative polyprotein [Oryza sativa]
Length = 658
Score = 124 bits (312), Expect = 9e-27
Identities = 65/135 (48%), Positives = 84/135 (62%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 10 VQKLVGRIAALSRFLSKAAERGLPFFKTLRGAGKFSWTPECQVAFAELKQYLQSPPALVS 69
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 70 PTPGSELLLYLAASPVAVSAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 129
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 130 SRKLKHYFQAHKVIV 144
>UniRef100_Q6UUP0 Putative polyprotein [Oryza sativa]
Length = 1392
Score = 124 bits (310), Expect = 2e-26
Identities = 64/135 (47%), Positives = 83/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 719 VQKLTGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECKAAFDELKQYLQSPPALIS 778
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL S AVS L ET+ GQKP YF S+AL G +TRY +++K+A ALV A
Sbjct: 779 PSPGSELLLYLVASPVAVSAALVQETESGQKPVYFVSEALQGAKTRYIEMKKLAYALVMA 838
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 839 SRKLKHYFQAHKVIV 853
Score = 45.8 bits (107), Expect = 0.005
Identities = 29/103 (28%), Positives = 46/103 (44%)
Query: 437 DPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVACHQLTVSPSASVVA 496
DPTK LG + E + L N D+FA S ++ + + H L V P+
Sbjct: 467 DPTKLVSLGGDMGEEEVESIQEVLKKNIDIFAWSPNEVGGVPADLIMHHLAVKPNIKPRK 526
Query: 497 QRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
Q+ +K ++ E + V+ L I E WL+N +LV+
Sbjct: 527 QKLRKMSADRQEAAKTEVQKLLWAGVIQEIDQPEWLANPVLVR 569
>UniRef100_Q75IH6 Putative polyprotein [Oryza sativa]
Length = 1048
Score = 123 bits (309), Expect = 2e-26
Identities = 64/135 (47%), Positives = 83/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 357 VQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDELKRYLQSPPALIS 416
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L E + GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 417 PPPGSELLLYLAASPVAVSAALVQEIESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 476
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 477 SRKLKHYFQAHKVIV 491
>UniRef100_Q8S636 Putative polyprotein [Oryza sativa]
Length = 1722
Score = 122 bits (307), Expect = 3e-26
Identities = 64/135 (47%), Positives = 84/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++++A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 999 VQKLAGRIVALSRFLSRAAERGLPFFKTLRGAGKFNWTPECQVAFDELKQYLQSPPALLS 1058
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 1059 PPPGSELLLYLAASPVAVSAALVQETKFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 1118
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 1119 SRKLKHYFQAHKVIV 1133
Score = 44.7 bits (104), Expect = 0.012
Identities = 51/249 (20%), Positives = 86/249 (34%), Gaps = 52/249 (20%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G + ++ F V+++ + YN I G L + +L+LK +I
Sbjct: 604 GSGENRREEQVLFDVVDIPYNYNTIFGRATLNMFEVISHHNYLELKMPGPTGVIVV---- 659
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRS--------TLHKVIV 415
G+QP + +H V V
Sbjct: 660 -----------------------------------KGLQPSAASKGDLAIINRAVHNVEV 684
Query: 416 ERAEEGKQGP--TQRGNTSPFGDD---PTKCFKLGKGIPEHARAHLIACLWLNTDLFARS 470
+ + K P T G D PTK LG + + ++ N D+FA S
Sbjct: 685 KLHDRPKHAPKPTPHGKIIKVQIDDAVPTKLVSLGGDMGKEEVESILKVPKKNIDIFAWS 744
Query: 471 ITDMPDIDPSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTT 530
++ + + H L V P A Q+ +K ++ E + V+ L I E +
Sbjct: 745 PDEVGGVSIVLIMHHLAVKPEAKPRKQKLRKMSADRQEAAKAEVQKLLRAGVIQEIDHPE 804
Query: 531 WLSNILLVK 539
WL+N +LV+
Sbjct: 805 WLANPVLVQ 813
>UniRef100_Q7Y1N5 Putative polyprotein [Oryza sativa]
Length = 1862
Score = 122 bits (307), Expect = 3e-26
Identities = 63/135 (46%), Positives = 84/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 1093 VQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALIS 1152
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S A+S L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 1153 PPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 1212
Query: 844 ARTH*KYFMAHTIAV 858
+R YF A+ + V
Sbjct: 1213 SRKLKHYFQANKVIV 1227
Score = 52.8 bits (125), Expect = 4e-05
Identities = 56/241 (23%), Positives = 87/241 (35%), Gaps = 36/241 (14%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G +I F V+ + + YN I G L + + +LKLK +I
Sbjct: 758 GSGENRSEEQILFDVVNIPYNYNAIFGRATLNKFEDISHHNYLKLKMPGPTGVIVVKGLQ 817
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRSTLHKVIVERAEEGKQ 423
AA +C L ++ +H V E E K
Sbjct: 818 PSAASKC------------DLAII-------------------NRAVHNVETEPHERPKH 846
Query: 424 GP--TQRGNTSPF---GDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDID 478
P T G + DPTK LG + E ++ L N D+F S ++ I
Sbjct: 847 TPKPTPHGKVTKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFPWSPDEVGGIP 906
Query: 479 PSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLV 538
+ H L V P+ Q+ +K ++ E + V+ L I E + WL+N +LV
Sbjct: 907 ADLIMHHLAVKPNIRPRKQKLRKMSADRQEAAKTEVQKLLRPGVIQEIDHLEWLANPVLV 966
Query: 539 K 539
+
Sbjct: 967 R 967
>UniRef100_Q7XXG9 OSJNBb0016B03.14 protein [Oryza sativa]
Length = 1323
Score = 122 bits (306), Expect = 5e-26
Identities = 64/135 (47%), Positives = 85/135 (62%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
++ L G + +L RF++K+A+ LPFF L+ KF WT EC++A LK L +PP L
Sbjct: 602 VKKLVGRIAALSRFLSKAAKRGLPFFKTLRGAGKFNWTPECQEAFDELKQYLQSPPALIS 661
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 662 PTPGSELLLYLAASPVAVSAALVQETKFGQKPVYFISEALQGAKTRYIEMEKLAYALVMA 721
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 722 SRKLKHYFQAHKVIV 736
Score = 50.1 bits (118), Expect = 3e-04
Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 48/247 (19%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G + ++ F V+++ + YN I G L + A+ +LKLK +I
Sbjct: 276 GSRENRREEQVLFDVVDIPYNYNAIFGRATLNKFDAISHHNYLKLKMPGPTGVIVV---- 331
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRS--RSTLHKVIVERAEEG 421
+ +G + D + +H V E +
Sbjct: 332 -----------------------------KGLLTSAGSKGDLAIINRAVHSVEAEPHDRP 362
Query: 422 KQGPTQRGNTSPFGD---------DPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSIT 472
K P +P G DP K LG + E ++ L N D+FA S
Sbjct: 363 KHSP----KPTPHGKIIMVQIDDADPAKLVSLGGDMGEEEAESILEVLKKNIDIFAWSPD 418
Query: 473 DMPDIDPSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWL 532
++ + + H L V P+ Q+ +K ++ E + V+ I E + WL
Sbjct: 419 EVGGVSTDLIMHHLVVKPNTKPKKQKLRKMSADRQEAAKAEVQKQLRAGVIQEIDHPEWL 478
Query: 533 SNILLVK 539
+N++LV+
Sbjct: 479 ANLVLVR 485
>UniRef100_Q94HQ3 Putative retroelement [Oryza sativa]
Length = 1705
Score = 122 bits (305), Expect = 6e-26
Identities = 64/135 (47%), Positives = 82/135 (60%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF +K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 1049 VQKLAGRIAALSRFFSKAAERGLPFFKTLQGAGKFNWTPECQAAFDELKQYLQSPPALIS 1108
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AV+ L ET GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 1109 PAPGSELLLYLAASPVAVNAALVQETDSGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 1168
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 1169 SRKLKYYFQAHKVIV 1183
Score = 54.3 bits (129), Expect = 2e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 437 DPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVACHQLTVSPSASVVA 496
DPTK LG + E +++ L N D+FA ++ + + H L V P A
Sbjct: 785 DPTKLVSLGGDMGEEEAENILEVLKKNIDIFAWGSDEVGGVSTDLIMHYLAVKPDAKPRK 844
Query: 497 QRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
Q+ +K F ++ E + ++ L + I E + WL+N +LV+
Sbjct: 845 QKLRKMFADRQEAAKAEIQKLLKAGVIQEIGHPEWLANPVLVR 887
>UniRef100_Q8S664 Putative retroelement [Oryza sativa]
Length = 1367
Score = 122 bits (305), Expect = 6e-26
Identities = 64/135 (47%), Positives = 82/135 (60%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF +K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 828 VQKLAGRIAALSRFFSKAAERGLPFFKTLQGAGKFNWTPECQAAFDELKQYLQSPPALIS 887
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AV+ L ET GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 888 PAPGSELLLYLAASPVAVNAALVQETDSGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 947
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 948 SRKLKYYFQAHKVIV 962
Score = 46.2 bits (108), Expect = 0.004
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 444 LGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVACHQLTVSPSASVVAQRRKKQF 503
LG + E +++ L N D+FA ++ + + H L V P A Q+ +K F
Sbjct: 642 LGGDMGEEEAENILEVLKKNIDIFAWGSDEVGGVSTDLIMHYLAVKPDAKPRKQKLRKMF 701
Query: 504 PEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
++ E + ++ L + I E + WL+N +LV+
Sbjct: 702 ADRQEAAKAEIQKLLKAGVIQEIGHPEWLANPVLVR 737
>UniRef100_Q851C2 Putative polyprotein [Oryza sativa]
Length = 777
Score = 120 bits (301), Expect = 2e-25
Identities = 63/135 (46%), Positives = 80/135 (58%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + L RF++K+A+ LPFF L+ KF WT EC+ LK L +PP L
Sbjct: 278 VQKLTGRIAVLSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAVFDELKQYLQSPPALIS 337
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 338 PASGSELLLYLAASPVAVSAALVQETDSGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 397
Query: 844 ARTH*KYFMAHTIAV 858
+ YF AH + V
Sbjct: 398 SLKLKHYFQAHKVIV 412
Score = 41.2 bits (95), Expect = 0.13
Identities = 24/90 (26%), Positives = 40/90 (43%)
Query: 450 EHARAHLIACLWLNTDLFARSITDMPDIDPSVACHQLTVSPSASVVAQRRKKQFPEKAEG 509
E +++ L N D+FA ++ + + H L V P A Q+ K + E
Sbjct: 3 EEEAKNILEVLKKNIDIFAWGPDEVGGVSADLIMHHLAVKPDAKPRKQKLHKMSANRQEA 62
Query: 510 TEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
+ VK L + I E + WL+N +LV+
Sbjct: 63 AKAEVKKLLKAGVIQEIDHPEWLANPVLVR 92
>UniRef100_Q8H7Z4 Putative polyprotein [Oryza sativa]
Length = 650
Score = 120 bits (300), Expect = 2e-25
Identities = 64/135 (47%), Positives = 83/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF W EC+ A LK L +PPVL
Sbjct: 164 VQKLAGRIVALSRFLSKAAERGLPFFKTLRGAGKFNWIPECQAAFDVLKQYLQSPPVLIS 223
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+ ALV A
Sbjct: 224 PPPGSELLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQGAKTRYIEMEKLTDALVMA 283
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 284 SRKLKHYFQAHKVIV 298
>UniRef100_Q9AXC3 Hypothetical protein [Antirrhinum hispanicum]
Length = 1455
Score = 120 bits (300), Expect = 2e-25
Identities = 59/135 (43%), Positives = 80/135 (58%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + SL RF++K+A+ LPFF +L F+W++EC+KA LK L PP L +
Sbjct: 904 VQRLTGRMASLIRFISKAAEKGLPFFKVLHNVKNFQWSDECQKAFDDLKGYLLCPPPLVK 963
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P +GE LY+YL+V E VS L P Y+TS+ L +TRY IEK A ALVT
Sbjct: 964 PQQGERLYVYLAVRKEVVSAVLARAEGRDHLPIYYTSRTLKDAKTRYSLIEKFAFALVTT 1023
Query: 844 ARTH*KYFMAHTIAV 858
A+ YF+ H I +
Sbjct: 1024 AQKLRSYFLTHPITI 1038
Score = 38.5 bits (88), Expect = 0.87
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 484 HQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLV 538
H + V P A V Q+R K PE+ + + ++ L I E +Y WL+N++LV
Sbjct: 663 HYIDVRPDAKPVQQKRHKMGPERNKVIKSEIQRLIGLNQIREVQYPEWLANVVLV 717
>UniRef100_Q6I5B8 Putative polyprotein [Oryza sativa]
Length = 1136
Score = 119 bits (298), Expect = 4e-25
Identities = 63/135 (46%), Positives = 82/135 (60%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L KF+WT EC+ LK L +PP L
Sbjct: 366 VQKLAGRIAALSRFLSKAAERGLPFFKTLLGAGKFDWTPECQATFDELKQYLQSPPALIS 425
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 426 PPPGSELLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 485
Query: 844 ARTH*KYFMAHTIAV 858
+ YF AH + V
Sbjct: 486 SCQLKHYFQAHKVIV 500
Score = 48.1 bits (113), Expect = 0.001
Identities = 55/241 (22%), Positives = 87/241 (35%), Gaps = 36/241 (14%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G + +I F V+++ + YN I G L + A+ +LKLK +I
Sbjct: 36 GSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPGLAGVIVVKGLQ 95
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRSTLHKVIVERAEEGKQ 423
AA + L ++ +H V E E+ K
Sbjct: 96 SSAASKS------------DLAII-------------------NRAVHSVETEPHEQPKN 124
Query: 424 --GPTQRGNTSPF---GDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDID 478
PT G + DPTK LG + E ++ L N D FA S ++ +
Sbjct: 125 MPKPTPHGKITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDTFAWSPDEVGGVP 184
Query: 479 PSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLV 538
+ H L V Q+ +K ++ E + V+ L I E + WL N +LV
Sbjct: 185 ADLIMHHLAVKLDIKPRKQKLRKMSADRQEAAKAEVQKLLRAGVIQEIDHPEWLVNPVLV 244
Query: 539 K 539
+
Sbjct: 245 R 245
>UniRef100_Q84SR2 Putative GAG-POL [Oryza sativa]
Length = 562
Score = 119 bits (297), Expect = 5e-25
Identities = 63/133 (47%), Positives = 82/133 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L + P L
Sbjct: 105 VQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSLPALIS 164
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 165 PPLGSDLLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 224
Query: 844 ARTH*KYFMAHTI 856
+R YF AH +
Sbjct: 225 SRKLKHYFQAHKV 237
>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
Length = 2001
Score = 117 bits (293), Expect = 1e-24
Identities = 57/135 (42%), Positives = 83/135 (61%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + SL RF++KSA+ LPFF L+ FEWT EC++A LK L P L+
Sbjct: 1239 VQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLAS 1298
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P +G+ L +Y++ + VS L E + Q P YF S+AL GP+TRY ++EK+ A+V A
Sbjct: 1299 PPKGQPLLMYVAATPATVSAVLVQEEENRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMA 1358
Query: 844 ARTH*KYFMAHTIAV 858
+R YF++H I +
Sbjct: 1359 SRKLRHYFLSHDITI 1373
Score = 52.8 bits (125), Expect = 4e-05
Identities = 51/236 (21%), Positives = 100/236 (41%), Gaps = 26/236 (11%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G + +I F V+++ + YN I+G + + A+ ++ +K + +I T+ G+
Sbjct: 844 GKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGLRGVI-TVRGE 902
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRSTLHKVIVERAEEGKQ 423
AA + LQG TP + GV + + I + EGK
Sbjct: 903 QLAARKYELQG--TPSV------------------KGVHVVDQKQGEYIKIQKPIPEGKT 942
Query: 424 GPTQRGNTSPFGDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVAC 483
Q +P K +G+ + +H ++ + N +FA S ++ +D S+
Sbjct: 943 KKVQLDE-----HNPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIE 997
Query: 484 HQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVK 539
H L + Q+ ++ ++ + + ++ L + K I E + WL+N +LVK
Sbjct: 998 HNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVK 1053
>UniRef100_Q75G47 Putative polyprotein [Oryza sativa]
Length = 1459
Score = 117 bits (292), Expect = 2e-24
Identities = 59/135 (43%), Positives = 82/135 (60%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + SL RF++KSA+ LPFF L+ F+W EC+KA LK+ L P LS
Sbjct: 696 MQRLTGRMASLSRFLSKSAERGLPFFKTLRAVNNFKWNEECQKAFDDLKDYLHNMPTLSS 755
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
P +GE L LY++ + VS L E Q P YF S+AL GP+TRY ++EK+ A+V A
Sbjct: 756 PQKGEPLLLYVAATPVTVSAVLVQEQGNKQMPVYFVSEALQGPKTRYIEVEKMIYAIVMA 815
Query: 844 ARTH*KYFMAHTIAV 858
+R YF++H I +
Sbjct: 816 SRKLRHYFLSHDITI 830
Score = 41.2 bits (95), Expect = 0.13
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 59/242 (24%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G + ++ F V+++ + YN ++G + + A+ ++ +K K +I+ G
Sbjct: 340 GGGENKRREEVVFDVVDMPYQYNAVLGRSTINIFEAIIHHNYICMKLPGPKGVISVRGGQ 399
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRSTLHKVIVERAEEGKQ 423
AA + LQG TP + GV I+E+ KQ
Sbjct: 400 L-AARKFELQG--TPNM------------------KGVY-----------IIEQ----KQ 423
Query: 424 GPTQRGNTSPFGDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDIDPSVAC 483
G + N P + TK L K PE ++ ++ S+
Sbjct: 424 GEYNK-NQKPIPEGKTKKVVLDKNEPE----------------------ELEGVERSLIE 460
Query: 484 HQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILLVKNLME 543
H L + P Q+ ++ ++ + + ++ L + K I E + WL+N +LVK M
Sbjct: 461 HNLAIKPEHKPKKQKLRRMSIDRQQAAKAELEKLLKAKVIREVLHPEWLANPVLVKMQMG 520
Query: 544 NG 545
+G
Sbjct: 521 SG 522
>UniRef100_Q7XK85 OSJNBb0046K02.14 protein [Oryza sativa]
Length = 891
Score = 116 bits (291), Expect = 3e-24
Identities = 61/135 (45%), Positives = 81/135 (59%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+A+ LPFF L+ KF WT EC+ A LK L +PP L
Sbjct: 243 VQKLEGRIAALSRFLSKAAERGLPFFKTLQGAGKFSWTTECQAAFDELKQYLQSPPALVS 302
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
G L LYL+ S AVS L E + QKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 303 LALGSELLLYLAASPVAVSAVLVQEKESSQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 362
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + +
Sbjct: 363 SRKLKHYFQAHKVTM 377
>UniRef100_Q7XSE2 OSJNBb0033G08.12 protein [Oryza sativa]
Length = 1847
Score = 116 bits (291), Expect = 3e-24
Identities = 62/135 (45%), Positives = 81/135 (59%)
Query: 724 IQTLNGMLTSLFRFVAKSAQHALPFFNLLKKETKFEWTNECEKALQHLKNSLSAPPVLSR 783
+Q L G + +L RF++K+ + LPFF L+ KF WT EC+ A LK L + P L
Sbjct: 1168 VQKLAGRIAALSRFLSKAPERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSTPALIS 1227
Query: 784 PDEGETLYLYLSVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTA 843
G L LYL+ S AVS L ET+ GQKP YF S+AL G +TRY ++EK+A ALV A
Sbjct: 1228 TPPGSELLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMA 1287
Query: 844 ARTH*KYFMAHTIAV 858
+R YF AH + V
Sbjct: 1288 SRKLKHYFQAHKVIV 1302
Score = 49.7 bits (117), Expect = 4e-04
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 36/239 (15%)
Query: 304 GDGNRTKTIKIPFLVIEVTFLYNCIIGMTGLVQLGAVC*TAHLKLKYHADKNIITTLYGD 363
G G + +I F V+++ + YN I G L + A+ +LKLK +I
Sbjct: 852 GSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAIFHHNYLKLKMPGPTGVIVVKGLQ 911
Query: 364 FEAA*RCFLQGE*TPELGFPLKVVCYG*GENCYEYSGVQPDRSRSTLHKVIVERAEEGKQ 423
AA +G+ L ++ +H V E E K
Sbjct: 912 RSAA----SKGD--------LAII-------------------NRAVHSVETEPHERLKH 940
Query: 424 GP--TQRGNTSPF---GDDPTKCFKLGKGIPEHARAHLIACLWLNTDLFARSITDMPDID 478
P T G + DPTK LG + E ++ L N D+FA S ++ +
Sbjct: 941 TPKPTPHGKITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVP 1000
Query: 479 PSVACHQLTVSPSASVVAQRRKKQFPEKAEGTEKFVKDLAEEKFIAEAKYTTWLSNILL 537
+ H L V P Q+ +K ++ E + V+ L + E + WL+N +L
Sbjct: 1001 ADLIMHHLAVKPDIKPRKQKLRKMSADRQEAAKAEVQKLLRAGVMQEIDHPEWLANPVL 1059
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.335 0.146 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,361,337,406
Number of Sequences: 2790947
Number of extensions: 54714726
Number of successful extensions: 176521
Number of sequences better than 10.0: 1637
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 173327
Number of HSP's gapped (non-prelim): 3065
length of query: 859
length of database: 848,049,833
effective HSP length: 136
effective length of query: 723
effective length of database: 468,481,041
effective search space: 338711792643
effective search space used: 338711792643
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 79 (35.0 bits)
Medicago: description of AC146649.7