BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146571.3 + phase: 0 
         (444 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9SVS0 Hypothetical protein F17L22.230 [Arabidopsis th...   583  e-165
UniRef100_Q7EZZ2 Hypothetical protein P0496C02.118 [Oryza sativa]     501  e-140
UniRef100_Q6MKN0 Putative RNA pseudouridylate synthase [Bdellovi...   117  9e-25
UniRef100_UPI000031FBF9 UPI000031FBF9 UniRef100 entry                  65  5e-09
UniRef100_UPI000031C047 UPI000031C047 UniRef100 entry                  65  5e-09
UniRef100_UPI00002D39BA UPI00002D39BA UniRef100 entry                  62  4e-08
UniRef100_UPI00002D147A UPI00002D147A UniRef100 entry                  60  1e-07
UniRef100_Q74I87 Hypothetical protein [Lactobacillus johnsonii]        60  2e-07
UniRef100_UPI00002C58A1 UPI00002C58A1 UniRef100 entry                  58  5e-07
UniRef100_P75485 Hypothetical pseudouridine synthase MG209 homol...    58  6e-07
UniRef100_UPI0000336DB6 UPI0000336DB6 UniRef100 entry                  57  1e-06
UniRef100_UPI00002A1C5A UPI00002A1C5A UniRef100 entry                  57  1e-06
UniRef100_Q7VR15 Pseudouridine synthase [Candidatus Blochmannia ...    57  1e-06
UniRef100_Q600J8 Pseudouridine synthase [Mycoplasma hyopneumoniae]     57  1e-06
UniRef100_UPI00002E5EEE UPI00002E5EEE UniRef100 entry                  57  1e-06
UniRef100_UPI00002A2EBA UPI00002A2EBA UniRef100 entry                  56  2e-06
UniRef100_UPI0000278750 UPI0000278750 UniRef100 entry                  56  2e-06
UniRef100_Q87AR7 Ribosomal large subunit pseudouridine synthase ...    56  2e-06
UniRef100_UPI00002F9182 UPI00002F9182 UniRef100 entry                  56  2e-06
UniRef100_Q8IZ73 C18B11 protein [Homo sapiens]                         56  2e-06

>UniRef100_Q9SVS0 Hypothetical protein F17L22.230 [Arabidopsis thaliana]
          Length = 472

 Score =  583 bits (1504), Expect = e-165
 Identities = 273/399 (68%), Positives = 332/399 (82%), Gaps = 8/399 (2%)

Query: 51  YPKYDRLLPCPSHKIPPRIEHLVVSQEGPVL-QYICKALDLPHLFVADLIQFGAVYFALV 109
           Y +Y+RL+PCP++ +PPRIEH+VV ++  ++ ++I K LDLP L+VADLI+FGAV++ALV
Sbjct: 73  YHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFGAVHYALV 132

Query: 110 SPEPPPTATAEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRV 169
            P+PPPTAT E+I +FE+VT P VL+KRSS+KGKT+REAQKTFRVT  NQ+ E GTYLRV
Sbjct: 133 CPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAGTYLRV 192

Query: 170 HVHPKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTT 229
           HVHPKR PRCYEIDW+SRI+AV +SYV+LDKPAGT+VG TT NIEESC TFA+RAL L  
Sbjct: 193 HVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRALDLPE 252

Query: 230 PLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRP 289
           PL TTHQIDNCTEGCVV AR KEYCSVFH KIR K+VKK+Y ALAA+PLPIGII HYMRP
Sbjct: 253 PLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGIISHYMRP 312

Query: 290 TNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVVQDEY----CGWPSQDYAYECKINL 345
            N APRL++ED I+GWH+CQLEV++C+KIPWP    + ++    CGW S+++AYEC INL
Sbjct: 313 KNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFAYECTINL 372

Query: 346 LTGRTHQIRAQFAACKAPIIGDTMYMPAAIAEMINPGLNPFGKYNKDFS-SESEKKTAVI 404
           LTG+THQIRAQ AAC AP++GD+MYMPAAIAEM NP  NP+GK  K ++  E++K+TAV 
Sbjct: 373 LTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTMEENQKETAVA 432

Query: 405 NWIAQHGKEPSVAIGLQACQISWDDD--EYIYRAGLPWW 441
            WI +HGKEP V IGLQACQISWDDD  E+ Y AG PWW
Sbjct: 433 EWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWW 471


>UniRef100_Q7EZZ2 Hypothetical protein P0496C02.118 [Oryza sativa]
          Length = 400

 Score =  501 bits (1289), Expect = e-140
 Identities = 230/350 (65%), Positives = 284/350 (80%), Gaps = 6/350 (1%)

Query: 98  LIQFGAVYFALVSPEPPPTATAEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDA 157
           LI+FGAVY+ALV+P+PPP A  E +RIF +VTEP VL +R S+KGKT+REAQKTFRVTD 
Sbjct: 41  LIKFGAVYYALVAPQPPPHAAPEHVRIFREVTEPSVLCRRKSIKGKTVREAQKTFRVTDP 100

Query: 158 NQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESC 217
           NQ +E GTYLRVHVHPKRFPRCYEIDW+SR+IAV ++YVVLDKPA TSVG  T NIEESC
Sbjct: 101 NQRLEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDNYVVLDKPAATSVGGATDNIEESC 160

Query: 218 VTFATRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASP 277
           V F +RALGL TPL+TTHQIDNC+EGCVVL++ KE+CSVFH  IREK+V K YLAL  +P
Sbjct: 161 VVFTSRALGLETPLMTTHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTTAP 220

Query: 278 LPIGIIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVVQD----EYCGWP 333
           +  GII HYMRP N APRL+SED IKGWH+CQ+E++DC+K+PWP+ +++     + CGWP
Sbjct: 221 VSTGIITHYMRPINRAPRLVSEDHIKGWHVCQMEILDCKKVPWPSSLIRKVHKVDNCGWP 280

Query: 334 SQDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMYMPAAIAEMINPGLNPFGKYNKDF 393
            Q+ AYECKINLLTG+THQIRAQ AA   PI+GD+ YM AA+A ++NP +NPFG++ +++
Sbjct: 281 QQEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAYMTAAMAAIVNPSINPFGRWGQNY 340

Query: 394 SSESEKKTAVINWIAQHGKEPSVAIGLQACQISWD--DDEYIYRAGLPWW 441
            SE EK  AV  WI+ HGKEP   IGLQA +ISWD   + + Y+AG+PWW
Sbjct: 341 DSEDEKAAAVEAWISCHGKEPKSVIGLQASEISWDYEGEHHSYKAGVPWW 390


>UniRef100_Q6MKN0 Putative RNA pseudouridylate synthase [Bdellovibrio bacteriovorus]
          Length = 283

 Score =  117 bits (292), Expect = 9e-25
 Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 20/217 (9%)

Query: 155 TDANQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIE 214
           T  +  V  G Y+RVH  P+RF    +  WRSRI+   E +VV +K +G  V  +  N+ 
Sbjct: 53  TTEDSSVSVGDYIRVHTKPRRFT-ANDGQWRSRIVFENEHFVVTNKISGLPVHASVDNLH 111

Query: 215 ESCVTFATRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLA-L 273
           E+  ++  + L     +  TH++D  T G +V A++ E+ + F+  +  +++ KIY A +
Sbjct: 112 ENLQSYLQQTLHQN--VYVTHRLDVPTRGLIVYAKSPEFQTEFNKLLIAREMNKIYRARV 169

Query: 274 AASPLPIGIIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVVQDEYCGWP 333
               L  G+++HYM P+  AP+++S++    W  C LE+++  K+               
Sbjct: 170 QGHSLSTGLLQHYMEPSPRAPKVVSKELQPKWQECLLEILEFSKL--------------- 214

Query: 334 SQDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMY 370
            ++   E +I L TGRTHQIRAQ +A   PI+GD  Y
Sbjct: 215 -ENEMSEVRIKLHTGRTHQIRAQLSAEGHPIVGDVAY 250


>UniRef100_UPI000031FBF9 UPI000031FBF9 UniRef100 entry
          Length = 221

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 46/186 (24%), Positives = 85/186 (44%), Gaps = 19/186 (10%)

Query: 185 RSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLITTHQIDNCTEGC 244
           + R+I  +E +++ +KP+  +V   T N  +  +    R +     +   H++D  T GC
Sbjct: 2   KDRVIYDDEDFLIFNKPSNYAVHSGTKN--DHGLIDILREVLKDNSINLCHRLDKGTSGC 59

Query: 245 VVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIKG 304
           +V+A+N+++   F+ +++++KVKKIY A+    +   I+      TNT          K 
Sbjct: 60  LVIAKNQKFLGFFNNQLKQRKVKKIYHAIVKDFISEEIVIEDSIDTNTKGSFNKVSINKN 119

Query: 305 WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPI 364
               +  +   +K+   +++                 +I +LTGRTHQIRAQ       I
Sbjct: 120 GKEAKSILKPLKKLDCSSLI-----------------EIEILTGRTHQIRAQCEKINKNI 162

Query: 365 IGDTMY 370
             D  Y
Sbjct: 163 ANDKKY 168


>UniRef100_UPI000031C047 UPI000031C047 UniRef100 entry
          Length = 236

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 49/171 (28%), Positives = 84/171 (48%), Gaps = 19/171 (11%)

Query: 185 RSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLITTHQIDNCTEGC 244
           R R+I  +E +++ +KP+  +V   T N  +  +    RA+     L   H++D  T GC
Sbjct: 85  RDRVIYDDEDFLIFNKPSNYAVHSGTKN--DHGLIDILRAVLKNNSLNLCHRLDKGTSGC 142

Query: 245 VVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIKG 304
           +V+A+N+++   F+ +++++KVKKIY A         I+K ++        ++ ED I  
Sbjct: 143 LVVAKNQKFLGFFNNQLKQRKVKKIYHA---------IVKDFI-----TEEMVIEDSIDT 188

Query: 305 WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRA 355
                   +   K    AI +          DY+   +I +LTGRTHQIRA
Sbjct: 189 NTKGSFNKVSINKDGKEAISILKPL---KKLDYSSLIEIEILTGRTHQIRA 236


>UniRef100_UPI00002D39BA UPI00002D39BA UniRef100 entry
          Length = 239

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 49/185 (26%), Positives = 82/185 (43%), Gaps = 23/185 (12%)

Query: 186 SRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLITTHQIDNCTEGCV 245
           + II   + Y+V++K +G +V   T + +     ++       +   T H++D  T G +
Sbjct: 28  NEIIFNNDDYIVINKSSGVAVQGGTKSFKNLIDIYSKSKFFENSKPYTVHRLDKETSGVM 87

Query: 246 VLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIKGW 305
           ++A+N++Y   F    R +K+ K YLA+      IG +K+                IKG 
Sbjct: 88  IIAKNRKYAQFFTSLFRIRKIYKTYLAIC-----IGEMKN----------------IKGI 126

Query: 306 HICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPII 365
            +  LE  +  K  +   +   +     SQ    E K   LTGR HQ+R Q +    PI+
Sbjct: 127 LVDNLEKKENNKKIYEKAITNYKVLNKNSQFSLVELK--PLTGRKHQLRKQTSLIGHPIV 184

Query: 366 GDTMY 370
           GD  Y
Sbjct: 185 GDDKY 189


>UniRef100_UPI00002D147A UPI00002D147A UniRef100 entry
          Length = 306

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 53/227 (23%), Positives = 98/227 (42%), Gaps = 26/227 (11%)

Query: 149 QKTFRVTDANQFVEPGTYLRVHVH-PKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSV- 206
           ++ +RV    +   P  + ++++   K  P+          I  ++S +V++KP G S  
Sbjct: 47  KQNYRVNSGEKVRFPPKFTKMNIDINKNMPKNMAFSLEEIKIYEDDSLIVINKPYGLSTQ 106

Query: 207 -GETTGNIEESCVTFATRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKK 265
            G       +  ++    +      L+  H++D  T G +++A+N+E  S +  K   K+
Sbjct: 107 GGTRVKYHIDGLLSIENESDKNNYRLV--HRLDKYTSGALIVAKNRESASFYTKKFLNKQ 164

Query: 266 VKKIYLALAAS--PLPIGIIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAI 323
           +KK YLAL +    +  G+I   +  +N      ++D  +   + Q EV++  K      
Sbjct: 165 IKKTYLALTSGVPDIKTGMISFPLEKSNLKKISKNQDQFQD-AVTQYEVIETTK------ 217

Query: 324 VVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMY 370
                       D     ++  +TGR HQIR   +   APIIGD  Y
Sbjct: 218 ------------DRVSLIRLEPITGRKHQIRRHLSMLNAPIIGDVKY 252


>UniRef100_Q74I87 Hypothetical protein [Lactobacillus johnsonii]
          Length = 282

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 61/228 (26%), Positives = 104/228 (44%), Gaps = 41/228 (17%)

Query: 158 NQFVEPGTYLRVHV-HPKRFPRCYEIDWR-SRIIAVEESYVVLDKPAGTSVGETTGNIEE 215
           N  V+PG  + + + H +   + Y    +  +++  +   +V++KPAG        N E+
Sbjct: 52  NFLVKPGDKIEIQLDHIESDQQPYPASGKLPKVVYEDNDILVINKPAGQKTHPNL-NEED 110

Query: 216 SCVTFATRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLA-LA 274
           + +      LG +  ++  H++D  T G +++A+N     + + ++ +K + + YLA ++
Sbjct: 111 TALNDCATYLGYSPFIV--HRLDMLTSGLLLVAKNPAVVPILNRQLTDKTLHREYLAWIS 168

Query: 275 ASP---------LPIGIIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVV 325
            SP         LPIG   H  R      R++ +D  K   +   EV+   K     I+V
Sbjct: 169 NSPQIKNTGIIDLPIGHDPHDQRK-----RMVRQDGQKA--VTHYEVIKRDK---DRILV 218

Query: 326 QDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMYMPA 373
                           K+ L TGRTHQIR   AA  APIIGD +Y  A
Sbjct: 219 ----------------KLTLETGRTHQIRVHLAALGAPIIGDPLYNSA 250


>UniRef100_UPI00002C58A1 UPI00002C58A1 UniRef100 entry
          Length = 266

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 25/184 (13%)

Query: 188 IIAVEESYVVLDKPAGTSVGETTGNIEESC-VTFATRALGLTTPLITTHQIDNCTEGCVV 246
           II   E+++V++KP+G  V   T + +    +  +T+      P I  H++D  T G ++
Sbjct: 57  IIENNENFIVINKPSGIPVQSGTKSFKNIIDILKSTKYFENLKPFIV-HRLDKETSGILI 115

Query: 247 LARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIKGWH 306
           +++N++Y  +F    R +K+ K YLA+    +   I        N    LIS D  K   
Sbjct: 116 VSKNRKYAQLFTSLFRIRKIHKTYLAITYGKINPKI-------KNMVDNLISYDNKK--K 166

Query: 307 ICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPIIG 366
           I Q      + I + +++         S D+    ++N +TGR HQ+R Q      PI+G
Sbjct: 167 IIQ------KAISYMSVIKS-------SSDHTL-VELNPITGRKHQLRKQLFNIGNPIVG 212

Query: 367 DTMY 370
           D  Y
Sbjct: 213 DDKY 216


>UniRef100_P75485 Hypothetical pseudouridine synthase MG209 homolog [Mycoplasma
           pneumoniae]
          Length = 309

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 62/276 (22%), Positives = 108/276 (38%), Gaps = 42/276 (15%)

Query: 106 FALVSPEPPPTATAEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGT 165
           F++ + +   T  A  + +       L++    S+ GK         ++T     V+P  
Sbjct: 5   FSVTTAQRLDTFLATLLNLSRVKVAKLIVDGLVSVNGK---------KITKNGWLVQPED 55

Query: 166 YLRVHVHPKRFPRC----YEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFA 221
            + V+   + F +        D+   I+  +E  +V++KP G     T+ N  ES +  A
Sbjct: 56  RVHVNWSEELFEKVPVEVQPYDFPLDILYEDEQIMVVNKPNGLISHPTSFNESESLLGAA 115

Query: 222 TRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIG 281
                   P+   H++D  T G ++LA+N+        +++++ +K+ YLAL   PL   
Sbjct: 116 LFHCN-HQPVFLVHRLDRDTSGVIMLAKNQSSLLHLQKQLQQRVMKRYYLALVHFPL--- 171

Query: 282 IIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPW-------PAIVVQDEYCGWPS 334
                             D + G     LE +   K+ W        A     ++     
Sbjct: 172 ------------------DSLSGTISAPLERVGNNKVMWKVGNSSNKAKNAFTKFTVLNQ 213

Query: 335 QDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMY 370
            + A   K  LLTGRTHQIR      K P+  D +Y
Sbjct: 214 NEKAALIKCELLTGRTHQIRVHLQFIKHPVYNDPLY 249


>UniRef100_UPI0000336DB6 UPI0000336DB6 UniRef100 entry
          Length = 325

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 39/252 (15%)

Query: 132 LVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAV 191
           L+L K+  +   TI +  K     D         Y+ + +   +       +++  I   
Sbjct: 37  LILNKKLKINKNTISDPSKKVSTND---------YINLEIPKPKKASLKPFNFKLEIAYE 87

Query: 192 EESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLI-------TTHQIDNCTEGC 244
           ++  +V++KPAG S+    G+ +++ V             I         H+ID  T G 
Sbjct: 88  DKDLLVVNKPAGISMHPGAGDYDKTLVNALVHYDSKNLSNIGDELRPGIVHRIDKDTSGL 147

Query: 245 VVLARNKEYCSVFHCKIREKKVKKIYLALAASPL--PIGIIKHYMRPTNTAPRLISEDCI 302
           VV+A+N         +  E  +K++Y  L    L   IG I+ ++  +    +L+     
Sbjct: 148 VVIAKNNVSHEKLSKQFSEHSIKRLYQTLVWGKLRPQIGKIETFITRSTKNRQLMEVGLT 207

Query: 303 KG----WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFA 358
           KG     +   LEV +  KIP  + +               ECK+   TGRTHQIR   +
Sbjct: 208 KGKKAITNYKTLEVFENEKIPTFSFI---------------ECKLE--TGRTHQIRVHMS 250

Query: 359 ACKAPIIGDTMY 370
                I+GD  Y
Sbjct: 251 YKGNNILGDKKY 262


>UniRef100_UPI00002A1C5A UPI00002A1C5A UniRef100 entry
          Length = 246

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 43/238 (18%)

Query: 132 LVLQKRSSLKGKTIREAQKTFRVTDAN--QFVEPGTYLRVHVHPKRFPRCYEIDWRSRII 189
           L+L+++  L  K I+   K   V D    Q  EP T     + P RF        R +II
Sbjct: 37  LILKEKLKLNNKIIKNPSKKVSVGDFIDLQIPEPKT---ASLKPYRF--------RLKII 85

Query: 190 AVEESYVVLDKPAGTSVGETTGNIEESCV----TFATRALGLTTPLIT---THQIDNCTE 242
             ++  +V+DKPAG  +    GN +++ V    T+   +L      +     H+ID  T 
Sbjct: 86  YEDKDLLVIDKPAGIIMHPGAGNYDKTIVNALMTYNKNSLSNIGDELRPGIVHRIDKNTS 145

Query: 243 GCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPL--PIGIIKHYMRPTNTAPRLISED 300
           G VV+A+N E       +  +  +K++Y  L    L    G I+ ++  ++   +L+   
Sbjct: 146 GLVVIAKNNETHENLSKQFNDHTIKRVYQLLIWGKLKPSYGRIETFITRSSKNRQLMEVS 205

Query: 301 CIKG----WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIR 354
             KG     +   LE+ + ++ P  ++V               ECK+   TGRTHQIR
Sbjct: 206 SSKGKKAITNYKTLEIFENQRTPTLSLV---------------ECKLE--TGRTHQIR 246


>UniRef100_Q7VR15 Pseudouridine synthase [Candidatus Blochmannia floridanus]
          Length = 322

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 185 RSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLI-TTHQIDNCTEG 243
           ++ +I  +E  +VL+KP+G SV     N  +  +  A R L      +   H++D  T G
Sbjct: 91  QNTVIYEDEHLLVLNKPSGISVHGGGDNKLQLNIIDALRMLRPKIRFLWLVHRLDRDTSG 150

Query: 244 CVVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIK 303
            +++A+++      H ++R +K++K YLA+        I       + +AP    +D IK
Sbjct: 151 LLLIAKSRIVLIKLHEQLRLQKIQKTYLAIVYGSWDTHIT------SISAPLFKKKDYIK 204

Query: 304 GWHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAP 363
             ++  ++     K+      V++ +     ++ A    I  +TGRTHQIR      + P
Sbjct: 205 NINVVFID-SKFGKLAQTCFQVKERF-----KNIATLLNIIPITGRTHQIRVHTQYAQCP 258

Query: 364 IIGDTMY 370
           IIGD +Y
Sbjct: 259 IIGDHVY 265


>UniRef100_Q600J8 Pseudouridine synthase [Mycoplasma hyopneumoniae]
          Length = 304

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 61/275 (22%)

Query: 119 AEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRV---HVHPKR 175
           A+   +  +V + L+L+K+  +    + +          NQ V+ G  +R+   +  PK 
Sbjct: 23  AKLANLSRKVAQDLILEKKVLINNNLVLKK---------NQIVKTGQKIRIFNDYKRPKP 73

Query: 176 FPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTF------ATRALGLTT 229
                EID+   II  +++ ++++KP    V    GN + + V        +   L    
Sbjct: 74  QLEPAEIDFE--IIFQDQNMILINKPKNLVVHPGVGNWKNTLVNGLISHFDSLEQLDHIR 131

Query: 230 PLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASP---------LPI 280
           P I  H++D  T G +++A+N +  S F  ++  +++K+ Y A+             LPI
Sbjct: 132 PGIV-HRLDKDTTGLLLVAKNAKAHSFFVNELANRQIKRFYKAIVIGKVLHKFMKINLPI 190

Query: 281 GI-IKHYMRPT----NTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVVQDEYCGWPSQ 335
           G  +K+ ++ T    N+ P + + + IK                         +  + +Q
Sbjct: 191 GRDLKNPLKKTISFFNSKPAITNVELIK-------------------------HFSYQNQ 225

Query: 336 DYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMY 370
           D++   K  L TGRTHQIR   A    PI GD +Y
Sbjct: 226 DFSL-VKCQLETGRTHQIRLHLAHIGYPIYGDPIY 259


>UniRef100_UPI00002E5EEE UPI00002E5EEE UniRef100 entry
          Length = 325

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 63/254 (24%), Positives = 105/254 (40%), Gaps = 44/254 (17%)

Query: 132 LVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRVHVHPKRF---PRCYEIDWRSRI 188
           L++  +  +  K I++  K   ++D+     P         PK+    P  YE+D    I
Sbjct: 37  LIINSKLKINQKVIKDPSKKISISDSIILEIP--------EPKQLSLKPYKYELD----I 84

Query: 189 IAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRA------LGLTTPLITTHQIDNCTE 242
           I  +E  ++++K AG S+    GN + + V            +G        H++D  T 
Sbjct: 85  IFEDEDLLIINKNAGISIHPGPGNYDNTIVNALINYNKKLSNIGDELRPGIVHRLDKDTS 144

Query: 243 GCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPL--PIGIIKHYMRPTNTAPRLISED 300
           G +++A+N         +     +K+IY AL    L    G I+ Y++ ++   +L+   
Sbjct: 145 GLILIAKNNISHENLSNQFNNHTIKRIYQALIWGKLRPQKGKIETYIKRSSKNRQLMEVS 204

Query: 301 CIKG----WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQ 356
             KG     +   L V +  KIP  ++V               ECK+   TGRTHQIR  
Sbjct: 205 ISKGKKAITNYKTLNVFENMKIPTFSLV---------------ECKLE--TGRTHQIRVH 247

Query: 357 FAACKAPIIGDTMY 370
            A     I+GD  Y
Sbjct: 248 MAFKGNNILGDKKY 261


>UniRef100_UPI00002A2EBA UPI00002A2EBA UniRef100 entry
          Length = 202

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/136 (26%), Positives = 63/136 (45%), Gaps = 17/136 (12%)

Query: 235 HQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAP 294
           H++D  T GC+V+A+N+++   F+ +++++KVKKIY A+    +   ++      TNT  
Sbjct: 31  HRLDKGTSGCLVIAKNQKFLGYFNNQLKQRKVKKIYHAIVKDFISEEMVIEDSIDTNTKG 90

Query: 295 RLISEDCIKGWHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIR 354
                   K     +  +   +K+   +++                 +I +LTGRTHQIR
Sbjct: 91  SFNKVSINKNGKEAKSILKPLKKLDCSSLI-----------------EIEILTGRTHQIR 133

Query: 355 AQFAACKAPIIGDTMY 370
           AQ       I  D  Y
Sbjct: 134 AQCEKINKNIANDKKY 149


>UniRef100_UPI0000278750 UPI0000278750 UniRef100 entry
          Length = 348

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 63/255 (24%), Positives = 111/255 (42%), Gaps = 45/255 (17%)

Query: 132 LVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRVHVHPKRF---PRCYEIDWRSRI 188
           L+L K+  +  KT+ +  K   V D  +   P         PK+    P  +++D    I
Sbjct: 59  LILNKKLKINKKTVIDPSKKIYVNDNIELEIP--------EPKKASLKPFNFKLD----I 106

Query: 189 IAVEESYVVLDKPAGTSVGETTGNIEESCVT----FATRALGLTTPLIT---THQIDNCT 241
           +  ++  +V++KPAG S+    G+ +++ V     + ++ L      +     H+ID  T
Sbjct: 107 VYEDKDLLVVNKPAGISMHPGAGDYDKTLVNALMFYDSKNLSNIGDELRPGIVHRIDKDT 166

Query: 242 EGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPL--PIGIIKHYMRPTNTAPRLISE 299
            G VV+A+N     +   +  E  +K+IY  L    L   +G I+  +  ++   +L+  
Sbjct: 167 SGLVVIAKNNFTHEILSNQFSEHSIKRIYQTLIWGKLRPQLGKIQTLITRSSKNRQLMEV 226

Query: 300 DCIKG----WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRA 355
              KG     +   L+V +  KIP  +++               ECK+   TGRTHQIR 
Sbjct: 227 GLTKGKKAITNYRTLKVFENEKIPTFSLI---------------ECKLE--TGRTHQIRV 269

Query: 356 QFAACKAPIIGDTMY 370
             +     I+GD  Y
Sbjct: 270 HMSHKGNYILGDKKY 284


>UniRef100_Q87AR7 Ribosomal large subunit pseudouridine synthase D [Xylella
           fastidiosa]
          Length = 331

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 50/186 (26%), Positives = 82/186 (43%), Gaps = 21/186 (11%)

Query: 188 IIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATR---ALGLTTPLITTHQIDNCTEGC 244
           I+  +E   V++KPAG  V    GN + + V        AL         H++D  T G 
Sbjct: 92  ILYEDEHVFVINKPAGLVVHPGAGNPDGTLVNALLHRDPALAAVPRAGVVHRLDKDTSGV 151

Query: 245 VVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPTNTAPRLISEDCIKG 304
           +V+AR  +  +    ++  ++V + YLA+  S L  G   +     +   RL        
Sbjct: 152 MVVARTLQAQTALVEQLSSRQVHRQYLAVVVSALVSGGTVNAAIERHPRDRL-------- 203

Query: 305 WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPI 364
               ++EV D  K       +++ +        A EC+++  TGRTHQIR   A  + PI
Sbjct: 204 ----RMEVSDTGKEAVTHYRLRERF----RAHTALECRLD--TGRTHQIRVHMAHLRHPI 253

Query: 365 IGDTMY 370
           +GD +Y
Sbjct: 254 VGDRLY 259


>UniRef100_UPI00002F9182 UPI00002F9182 UniRef100 entry
          Length = 292

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 66/269 (24%), Positives = 105/269 (38%), Gaps = 45/269 (16%)

Query: 118 TAEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRVHVHPKRF- 176
           T +QI +     + L+L K+  L    +    K   V D      P         PK+  
Sbjct: 23  TYKQISLSRTRVKRLILNKKLKLNNSILNNPSKRISVGDKVTLEIP--------EPKKTS 74

Query: 177 --PRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTPLI-- 232
             P  +++D    II  ++S ++++KP+G  +    GN +++ V       G     I  
Sbjct: 75  LKPYNFKLD----IIYEDKSLLIINKPSGIIMHPGAGNYDKTIVNALMNYCGGNLSNIGD 130

Query: 233 -----TTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPL--PIGIIKH 285
                  H+ID  T G VV+A+N         +  +  +K++Y  L    L    G IK 
Sbjct: 131 ELRPGIVHRIDKETSGLVVVAKNNLAHENLSSQFNKHTIKRVYQLLVWGKLRPQTGTIKT 190

Query: 286 YMRPTNTAPRLISEDCIKG----WHICQLEVMDCRKIPWPAIVVQDEYCGWPSQDYAYEC 341
            ++ +    +L+     KG     +   LEV +   IP  + V               EC
Sbjct: 191 LIKRSTKNRQLMEVGSTKGKIAITNYKTLEVFESNLIPTLSFV---------------EC 235

Query: 342 KINLLTGRTHQIRAQFAACKAPIIGDTMY 370
           K+   TGRTHQIR         I+GD  Y
Sbjct: 236 KLE--TGRTHQIRVHMKYKGNSILGDKKY 262


>UniRef100_Q8IZ73 C18B11 protein [Homo sapiens]
          Length = 511

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 57/221 (25%), Positives = 89/221 (39%), Gaps = 21/221 (9%)

Query: 154 VTDANQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNI 213
           V D N  ++   +LR  VH    P   E     R++A  E  VV+DKP+   V    G  
Sbjct: 160 VQDLNIVLKDNDFLRNTVHRHEPPVTAE---PIRLLAENEDVVVVDKPSSIPV-HPCGRF 215

Query: 214 EESCVTFATRALGLTTPLITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLAL 273
             + V F          L   H++D  T G ++ A+        H ++R+++++K Y+  
Sbjct: 216 RHNTVIFILGKEHQLKELHPLHRLDRLTSGVLMFAKTAAVSERIHEQVRDRQLEKEYVCR 275

Query: 274 AASPLPIGIIKHYMRPTNTAPRLISEDCIKGWHICQLEVMDCRKIPWPAIVVQDEYCGWP 333
                P   +      T   P L+    +    +C++   D R  P   +  +  Y G  
Sbjct: 276 VEGEFPTEEV------TCKEPILVVSYKVG---VCRV---DPRGKPCETVFQRLSYNG-- 321

Query: 334 SQDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMYMPAA 374
            Q     C+   LTGRTHQIR        PI+ D +Y   A
Sbjct: 322 -QSSVVRCRP--LTGRTHQIRVHLQFLGHPILNDPIYNSVA 359


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.321    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 775,799,396
Number of Sequences: 2790947
Number of extensions: 33017730
Number of successful extensions: 65264
Number of sequences better than 10.0: 916
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 425
Number of HSP's that attempted gapping in prelim test: 63894
Number of HSP's gapped (non-prelim): 1440
length of query: 444
length of database: 848,049,833
effective HSP length: 131
effective length of query: 313
effective length of database: 482,435,776
effective search space: 151002397888
effective search space used: 151002397888
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)