BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146568.9 + phase: 0 /pseudo
         (19 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9XF99 Skp1 [Medicago sativa]                                33  1.7
UniRef100_Q9M3N3 Putative kinetochore protein [Vicia faba]             32  4.9
UniRef100_O65283 UIP2 [Arabidopsis thaliana]                           31  8.3

>UniRef100_Q9XF99 Skp1 [Medicago sativa]
          Length = 153

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 15/16 (93%), Positives = 16/16 (99%)

Query: 4  STRKITLKSSDGETFE 19
          +TRKITLKSSDGETFE
Sbjct: 1  TTRKITLKSSDGETFE 16


>UniRef100_Q9M3N3 Putative kinetochore protein [Vicia faba]
          Length = 124

 Score = 32.0 bits (71), Expect = 4.9
 Identities = 14/17 (82%), Positives = 16/17 (93%)

Query: 3  SSTRKITLKSSDGETFE 19
          +ST+KITLKSSDGE FE
Sbjct: 2  ASTKKITLKSSDGEAFE 18


>UniRef100_O65283 UIP2 [Arabidopsis thaliana]
          Length = 172

 Score = 31.2 bits (69), Expect = 8.3
 Identities = 14/17 (82%), Positives = 15/17 (87%)

Query: 3  SSTRKITLKSSDGETFE 19
          S+ RKITLKSSDGE FE
Sbjct: 3  STVRKITLKSSDGENFE 19


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.298    0.112    0.266 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,878,129
Number of Sequences: 2790947
Number of extensions: 126346
Number of successful extensions: 146
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143
Number of HSP's gapped (non-prelim): 3
length of query: 19
length of database: 848,049,833
effective HSP length: 0
effective length of query: 24
effective length of database: 848,049,833
effective search space: 20353195992
effective search space used: 20353195992
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 69 (31.2 bits)