BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146564.8 - phase: 0 /pseudo
         (430 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]              223  8e-57
UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]                 194  5e-48
UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]              181  4e-44
UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcrip...   170  6e-41
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip...   169  2e-40
UniRef100_Q7XMF5 OSJNBa0061G20.4 protein [Oryza sativa]               164  6e-39
UniRef100_Q7X970 BZIP-like protein [Oryza sativa]                     163  8e-39
UniRef100_Q9SK98 Very similar to retrotransposon reverse transcr...   160  8e-38
UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa]        158  3e-37
UniRef100_Q94GP2 Putative reverse transcriptase [Oryza sativa]        157  4e-37
UniRef100_Q5XWR0 Hypothetical protein [Solanum tuberosum]             156  1e-36
UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]              156  1e-36
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip...   155  2e-36
UniRef100_Q6ATM7 Hypothetical protein OSJNBb0021K20.15 [Oryza sa...   152  2e-35
UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa]        151  4e-35
UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like...   150  5e-35
UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thali...   147  4e-34
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]       147  7e-34
UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcrip...   145  2e-33
UniRef100_O22220 Putative non-LTR retroelement reverse transcrip...   145  3e-33

>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
          Length = 1026

 Score =  223 bits (568), Expect = 8e-57
 Identities = 142/431 (32%), Positives = 226/431 (51%), Gaps = 25/431 (5%)

Query: 1   LKALLRGFEMASGLKVNFAKSCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANP 60
           LK +L  FE  SGLK+NF KS +      +E  D   N   C+ GS P +YLG+P+    
Sbjct: 506 LKYILCLFEQLSGLKINFNKSEVFCFGEAKEKQDLYSNIFTCKVGSLPLKYLGIPIDQKR 565

Query: 61  RRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVV 120
                W+   + ++ +L  W  +  S+GGR++LLN+ L+++P + ++F++LP  V +R+ 
Sbjct: 566 ILNKDWKLAENKMEHKLGCWQGRLQSIGGRLILLNSTLSSVPMYMISFYRLPKGVQERID 625

Query: 121 RIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQP 180
             ++ FLW    G +K   V W  VC PRD+GGLGV D++ +N ++L KW WRL + E+ 
Sbjct: 626 YFRKRFLWQEDQGIRKYHLVNWPLVCSPRDQGGLGVLDLEAMNKAMLGKWIWRL-ENEEG 684

Query: 181 L*KDVLRCKYGSRINFLLDPIYN-SWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNG 239
             ++++  KY S       P+      + +S +W  +M ++     + F     + VGNG
Sbjct: 685 WWQEIIYAKYCSD-----KPLSGLRLKAGSSHFWQGVMEVK-----DDFFSFCTKIVGNG 734

Query: 240 ETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLFVWEEGLIH 299
           E T FW D W+G + L + FP L+ I   K   + ++   G   + +RR L   +     
Sbjct: 735 EKTLFWEDSWLGGKPLAIQFPSLYGIVITKRITIADLNRKGIDCMKFRRDLHGDKLRDWR 794

Query: 300 ILLDELEGREVSEP-MDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAMVFGSVW 358
            +++  EG  + E   D  WW L + G  +V S Y   +KLQ    P  N K      +W
Sbjct: 795 KIVNSWEGLNLVENCKDKLWWTLSKDGKFTVRSFYRA-LKLQQTSFP--NKK------IW 845

Query: 359 KSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDMS 418
           K   P K+ +F W    ++I TKDNLLKR     ++  +C FCD+V ET  HLF  C ++
Sbjct: 846 KFRVPLKIRIFIWFFTKNKILTKDNLLKRGWRKGDN--KCQFCDKV-ETVQHLFFDCPLA 902

Query: 419 FKVWSMVYCRL 429
             +W+++ C L
Sbjct: 903 RLIWNIIACAL 913


>UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]
          Length = 764

 Score =  194 bits (492), Expect = 5e-48
 Identities = 122/422 (28%), Positives = 197/422 (45%), Gaps = 21/422 (4%)

Query: 1   LKALLRGFEMASGLKVNFAKSCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANP 60
           +K LL  +E  SGLK+N+ KS ++ +           +  NC+ G  PF YLG+P+  N 
Sbjct: 237 VKFLLYCYEAMSGLKINYQKSEIMVIGGDEMETQRVADLFNCQAGKMPFTYLGIPISMNK 296

Query: 61  RRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVV 120
              +  +   + ++KRL +W   Y+S GG+ +L+N+ L++IP + +  + LP  V  ++ 
Sbjct: 297 LTNADLDIPPNKIEKRLATWKCGYLSYGGKAILINSCLSSIPLYMMGVYLLPEGVHNKMD 356

Query: 121 RIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQP 180
            I+  F W G+   +K   +KW  +C P++ GGLG  D + +NI+LL KW +RL   ++ 
Sbjct: 357 SIRARFFWEGLEKKRKYHMIKWEALCRPKEFGGLGFIDTRKMNIALLCKWIYRLESGKED 416

Query: 181 L*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNGE 240
               +LR KY           + S +  +S++W  L  ++      W +     KVGNG+
Sbjct: 417 PCCVLLRNKYMKDGG----GFFQSKAEESSQFWKGLHEVK-----KWMDLGSSYKVGNGK 467

Query: 241 TTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLFVWEEGLIHI 300
            T FW D W+G   L   +P ++ + + KE  V ++ ++GDW +  RRSL   +    + 
Sbjct: 468 ATNFWSDVWIGETPLKTQYPNIYRMCADKEKTVSQMCLEGDWYIELRRSLGERDLNEWND 527

Query: 301 LLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAMVFGSVWKS 360
           L +      + E  D   WKL + G     + Y                K  V   +W+S
Sbjct: 528 LHNTPREIHLKEERDCIIWKLTKNGFYKAKTLYQ--------ALSFGGVKDKVMQDLWRS 579

Query: 361 PTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDMSFK 420
             P KV +  W  L  RI     L K   +    S  C  C Q  E   HL   C +S  
Sbjct: 580 SIPLKVKILFWLMLKGRIQAAGQLKK---MKWSGSPNCKLCGQT-EDVDHLMFRCHISQF 635

Query: 421 VW 422
           +W
Sbjct: 636 MW 637


>UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]
          Length = 593

 Score =  181 bits (459), Expect = 4e-44
 Identities = 130/447 (29%), Positives = 217/447 (48%), Gaps = 66/447 (14%)

Query: 1   LKALLRGFEMASGLKVNFAKSCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANP 60
           LK +L  FE  SGLK+NF KS L+      E          C+ GS   +YLGLP+    
Sbjct: 150 LKLVLSAFERLSGLKINFHKSELLCFGKAIEVEREYALLFGCKTGSYTLKYLGLPMHYRK 209

Query: 61  RRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVV 120
                W+ + +  +KRL SW  K +S+GGR+VL+N+VL+++  + L+FF++P  + K++ 
Sbjct: 210 LSNKDWKEVEERFQKRLGSWKGKLLSVGGRLVLINSVLSSLAMYMLSFFEVPKGIIKKLD 269

Query: 121 RIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISL---LAKWRWRLVQP 177
             +  F W      KK    +W+ +C P++ GGLG++++++ N  L   LAK  W     
Sbjct: 270 YYRSRFFWQSDEHKKKYRLARWSVLCKPKECGGLGIQNLEVQNKCLLRGLAKLVW----- 324

Query: 178 EQPL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVG 237
                +++LR KY ++   +            S +W  LM ++     + F+     K+ 
Sbjct: 325 -----QNLLRKKYLAKKTIMQVQKQRG----DSHFWTGLMGVK-----DTFSSFGSFKLQ 370

Query: 238 NGETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLF-----V 292
           +G   RFW D W+GN++L   +P L+++   K  +V +V      N+++RR++       
Sbjct: 371 DGLQIRFWEDCWLGNQSLEKIYPSLYNLVRNKNVVVAKVLERVPLNVSFRRAIIGDNLKA 430

Query: 293 WEEGLIHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAM 352
           W E + +++   L G++     D + W   + G  +V+S Y                K +
Sbjct: 431 WHEIVANVVDINLRGQK-----DRFTWDASKNGTFTVNSMY----------------KKL 469

Query: 353 VFGSV-------WKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVG 405
           +FG+V       WK   P K+ +F W      I TKDNL KRR    + S+RC FC +  
Sbjct: 470 MFGNVIPRQSFIWKLRLPLKIKIFLWYLKEGVILTKDNLAKRR---WKGSLRCCFC-RSH 525

Query: 406 ETAAHLFLHCDMSF-------KVWSMV 425
           ET  +LF  C M         ++WS++
Sbjct: 526 ETIQYLFFDCPMVIFRGTHWARLWSLL 552


>UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score =  170 bits (431), Expect = 6e-41
 Identities = 120/432 (27%), Positives = 201/432 (45%), Gaps = 24/432 (5%)

Query: 4   LLRGFEMASGLKVNFAKSCLI-GVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANPRR 62
           +L+ +E ASG  VNF KS ++ G  +     +     +   +     +YLGLP      +
Sbjct: 157 VLKLYEKASGQAVNFQKSAILFGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNK 216

Query: 63  LSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRI 122
            + +  +   + +++++W NK +S  G+ VL+ +++ AIP + ++ F LP+++  ++   
Sbjct: 217 TNAFSFIAQTMDQKMDNWYNKLLSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSA 276

Query: 123 QREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL* 182
            R F W       K+ WV W+ +  P+  GGL +RD+K  NI+LLAK  WR++Q    L 
Sbjct: 277 MRWFWWSNTKVKHKIPWVAWSKLNDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLM 336

Query: 183 KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNGETT 242
             V + KY  +   LLD    S SS A   W  ++      G    +R +    GNG   
Sbjct: 337 ARVFKAKYFPK-ERLLDAKATSQSSYA---WKSILH-----GTKLISRGLKYIAGNGNNI 387

Query: 243 RFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLFVWEEGLIHILL 302
           + W D+W+             SI SQ +  V ++ ++G WN      L + +  + HI  
Sbjct: 388 QLWKDNWLPLNPPRPPVGTCDSIYSQLK--VSDLLIEGRWNEDLLCKL-IHQNDIPHI-- 442

Query: 303 DELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMP-----PEPLENTKAMVFGSV 357
                  ++   D+  W     G  SV S Y L  KL        P P E +   VF ++
Sbjct: 443 -RAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQTVFTNI 501

Query: 358 WKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDM 417
           WK   P K+  F W+S  + +PT  NL +RR++  ++   C  C +  E   HL   C +
Sbjct: 502 WKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDT---CQRCGEASEDVNHLLFQCRV 558

Query: 418 SFKVWSMVYCRL 429
           S ++W   + +L
Sbjct: 559 SKEIWEQAHIKL 570


>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1344

 Score =  169 bits (427), Expect = 2e-40
 Identities = 117/439 (26%), Positives = 205/439 (46%), Gaps = 38/439 (8%)

Query: 1    LKALLRGFEMASGLKVNFAKSCL-IGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
            L   L  +   SG  +N  KS +  G NV  +  D   +           +YLGLP   +
Sbjct: 677  LMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLS 736

Query: 60   PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
              +   +  + + L+ RL  W  K +S GG+ VLL ++  A+P + ++ FKLP  + +++
Sbjct: 737  GSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKL 796

Query: 120  VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
              +  +F W  +   +K+ W+ W  + LP+D+GG G +D++  N +LLAK  WR++Q + 
Sbjct: 797  TTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKG 856

Query: 180  PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRK---- 235
             L   V + +Y S  +FL      +  S  S  W  ++          F RE++ +    
Sbjct: 857  SLFSRVFQSRYFSNSDFL----SATRGSRPSYAWRSIL----------FGRELLMQGLRT 902

Query: 236  -VGNGETTRFWLDHWV--GNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLFV 292
             +GNG+ T  W D W+  G+    L   R  ++  +   ++       +WNL   R LF 
Sbjct: 903  VIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDP--TSRNWNLNMLRDLFP 960

Query: 293  WEEGLIHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSY-----SLHVKLQMPPEPLE 347
            W++  + I+L +   R +    DS+ W     G+ SV + Y      +H +L    +   
Sbjct: 961  WKD--VEIILKQ---RPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKP 1015

Query: 348  NTKAMVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGET 407
            +  ++ F  +W   T  K+ +F W++L   IP +D L  R I    S   C+ CD   ET
Sbjct: 1016 SVNSL-FDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGI---RSDDGCLMCDTENET 1071

Query: 408  AAHLFLHCDMSFKVWSMVY 426
              H+   C ++ +VW++ +
Sbjct: 1072 INHILFECPLARQVWAITH 1090


>UniRef100_Q7XMF5 OSJNBa0061G20.4 protein [Oryza sativa]
          Length = 632

 Score =  164 bits (414), Expect = 6e-39
 Identities = 129/434 (29%), Positives = 200/434 (45%), Gaps = 38/434 (8%)

Query: 1   LKALLRGFEMASGLKVNFAKSCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANP 60
           LKALL+ F++ + LKVNF KSCLI +NV             C+ GS PF YLGLP+G   
Sbjct: 165 LKALLQTFQLGTSLKVNFNKSCLIPINVDEGKAQNLAAVFGCQLGSLPFTYLGLPLGTIK 224

Query: 61  RRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVV 120
            ++  + PL+D  ++RL S    ++S G R+ L+N+V +++P +Y+    LP  V   + 
Sbjct: 225 PKVIDFAPLVDRTERRLTS-NAYFLSYGVRLTLVNSVFSSLPTYYMCTLMLPKTVIDSID 283

Query: 121 RIQREFLWGG--VNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQP- 177
           R +R  LW G  VN  KK     W  VC P+ KGGLGV ++ + N +LL K+  +  +  
Sbjct: 284 RARRHCLWRGSEVNSNKK-SLAAWHKVCKPKRKGGLGVLNLSIQNQALLIKFLDKFSKKN 342

Query: 178 EQPL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVR-KV 236
           + P    V    YG+ +  L        +   + WW D+  L  V       R + R  +
Sbjct: 343 DLPWVNLVWSSYYGNYVPHLT-------NLKGTFWWRDICKLMDVF------RGIARCHL 389

Query: 237 GNGETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGE-VWVDGDWNLTWRRSLFVWEE 295
            +G T   W   W     L+ T  RL S +  + A V + + ++ + N T   S+  ++E
Sbjct: 390 KSGNTCSIWYYVWADQPPLFHTMSRLCSFAQNQNASVSDFLSIEAEENCTLPLSVQAFQE 449

Query: 296 GLIHILLDELEGREVSEPMDSW---WWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAM 352
                L   L   E+    D+W   W  ++     S    Y+L+ +   PP        +
Sbjct: 450 --FQELTSSLVDIELVNENDAWSYIWGNMK----YSSQKFYALNFRAIKPP--------V 495

Query: 353 VFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVG-ETAAHL 411
            F  +WK      V VF W  +++R  TK  L  +   P +  + CV C  V  E   HL
Sbjct: 496 HFLWLWKCNAVSNVKVFGWLLMMNRFNTKFMLDYKNCAPPDCDLSCVLCQSVAIEDPMHL 555

Query: 412 FLHCDMSFKVWSMV 425
              C  +   WS++
Sbjct: 556 IFLCPFAQNCWSLL 569


>UniRef100_Q7X970 BZIP-like protein [Oryza sativa]
          Length = 2367

 Score =  163 bits (413), Expect = 8e-39
 Identities = 120/432 (27%), Positives = 198/432 (45%), Gaps = 26/432 (6%)

Query: 1    LKALLRGFEMASGLKVNFAK-SCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
            +K +L  + M +G  +N AK S L+G        +A    +         +YLG P    
Sbjct: 1433 VKEVLSSYAMGTGQLINPAKCSILMGGASTPAVSEAISEILQVERDRFEDRYLGFPTPEG 1492

Query: 60   PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
                  ++ L   + KR+  WG  ++S GG+ VL+ AV+ AIP + +  FKLP  V   +
Sbjct: 1493 RMHKGRFQSLQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDL 1552

Query: 120  VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
             ++ + F W  +NG +K  W  W ++  P+  GGLG RD +L N +LLA+  WRL+    
Sbjct: 1553 TKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPD 1612

Query: 180  PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNG 239
             L   VL+ KY      L+D  + S SS A R      S+E   G +   + ++ +VGNG
Sbjct: 1613 SLCARVLKAKYFPH-GSLIDTSFGSNSSPAWR------SIE--YGLDLLKKGIIWRVGNG 1663

Query: 240  ETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLF--VWEEGL 297
             + R W D W+  +  +   P     + + + +   +  DG W++      F  +  E +
Sbjct: 1664 NSIRIWRDSWLPRD--HSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVI 1721

Query: 298  IHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLE---NTKAMVF 354
            ++I +            D   W  ++ G+ SV S+Y L  +L    E      N     +
Sbjct: 1722 LNICISS------RSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAW 1775

Query: 355  GSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLH 414
              +WK   P KV +F+W+   + + T  N  KR++   E S  C  CD+  E  AH    
Sbjct: 1776 EMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKL---EQSDMCQICDRENEDDAHALCR 1832

Query: 415  CDMSFKVWSMVY 426
            C  + ++WS ++
Sbjct: 1833 CIQASQLWSCMH 1844


>UniRef100_Q9SK98 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  160 bits (404), Expect = 8e-38
 Identities = 124/434 (28%), Positives = 201/434 (45%), Gaps = 32/434 (7%)

Query: 1   LKALLRGFEMASGLKVNFAKSCL-IGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
           L+++L  +  A+G  +N AKS +  G  V           +   +      YLGLP   +
Sbjct: 547 LQSILGAYGAATGQIINLAKSSITFGSKVETVKKAEIQTCLGIFKEGDASTYLGLPECFS 606

Query: 60  PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
             ++   + +   LK +L+SW +K +S GG+ ++L AV  A+P F ++ FKLP      +
Sbjct: 607 GSKIEMLDYIKVRLKSKLSSWFSKSLSQGGKEIMLKAVAMAMPVFAMSCFKLPKTTCTNL 666

Query: 120 VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
                +F W   +  +K+ W+ W  +CLP++ GGLG RD+ L N +LLAK  WRL+Q   
Sbjct: 667 ASAMADFWWSANDHQRKIHWLSWEKLCLPKEHGGLGFRDIGLFNQALLAKQAWRLLQFPD 726

Query: 180 PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNG 239
            L   +++ +Y     FL   +     S  S  W  ++      G +   R +V++VGNG
Sbjct: 727 CLFARLIKSRYFPVGEFLDSDV----GSRPSFGWRSILH-----GRDLLCRGLVKRVGNG 777

Query: 240 ETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEV--WVDGDWNLTWRRSLFVWEEGL 297
           ++ R W+D+W+ +    L  P + +     + +V ++  +   DW L      F  ++  
Sbjct: 778 KSIRVWIDYWLDDNG--LRAPWIKNPIINVDLLVSDLIDYEKRDWRLDKLEEQFFPDD-- 833

Query: 298 IHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSL-------HVKLQMPPEPLENTK 350
              ++   E R V    D W WK  + G  SV   Y L        V ++   +P  N  
Sbjct: 834 ---VVKIRENRPVVSLDDFWIWKHNKSGDYSVKLGYWLASNQNLGQVAIEAMMQPSLND- 889

Query: 351 AMVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAH 410
             +   VWK  T  K+ VF W+ L   IP  D LL  R +  +S  RC  C   GE+  H
Sbjct: 890 --LKTQVWKLQTEPKIKVFLWKVLSGAIPVVD-LLSYRGMKLDS--RCQTCGCEGESIQH 944

Query: 411 LFLHCDMSFKVWSM 424
           +   C    +VW+M
Sbjct: 945 VLFSCSFPRQVWAM 958


>UniRef100_Q7XCS1 Putative reverse transcriptase [Oryza sativa]
          Length = 791

 Score =  158 bits (399), Expect = 3e-37
 Identities = 119/432 (27%), Positives = 196/432 (44%), Gaps = 26/432 (6%)

Query: 1   LKALLRGFEMASGLKVNFAK-SCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
           +K +L  + M +G  +N AK S L+G        +A    +         +YL  P    
Sbjct: 109 VKEVLSSYAMGTGQLINPAKCSILMGGASTPAVSEAISEILQVERDRFEDRYLEFPTPEG 168

Query: 60  PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
                 ++ L   + KR+  WG  ++S GG+ VL+ AV+ AIP + +  FKLP  V   +
Sbjct: 169 RMHKGRFQSLQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDL 228

Query: 120 VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
            ++ + F W  +NG +K  W  W ++  P+  GGLG RD  L N +LLA+  WRL+    
Sbjct: 229 TKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYWLFNQALLARQAWRLITYPD 288

Query: 180 PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNG 239
            L   VL+ KY      L+D  + S SS A R      S+E   G +   + ++ +VGNG
Sbjct: 289 SLCARVLKAKYFPH-GSLIDTSFGSNSSPAWR------SIE--YGLDLLKKGIIWRVGNG 339

Query: 240 ETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLF--VWEEGL 297
            + R W D W+  +  +   P     + + + +   +  DG W++      F  +  E +
Sbjct: 340 NSIRIWRDPWLPRD--HSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVI 397

Query: 298 IHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLE---NTKAMVF 354
           ++I +            D   W  ++ G+ SV S+Y L  +L    E      N     +
Sbjct: 398 LNICISS------RSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAW 451

Query: 355 GSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLH 414
             +WK   P KV +F+W+   + + T  N  KR++   E S  C  CD+  E  AH    
Sbjct: 452 EMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKL---EQSDMCQICDRENEDDAHALCR 508

Query: 415 CDMSFKVWSMVY 426
           C  + ++WS ++
Sbjct: 509 CIQASQLWSCMH 520


>UniRef100_Q94GP2 Putative reverse transcriptase [Oryza sativa]
          Length = 1833

 Score =  157 bits (398), Expect = 4e-37
 Identities = 108/381 (28%), Positives = 173/381 (45%), Gaps = 41/381 (10%)

Query: 50   QYLGLPVGANPRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFF 109
            +YLGLP      +   ++P+ D L KR++ W  KY+S G + VL+ +V  A+P + +  F
Sbjct: 661  KYLGLPTPDGRMKAEQFQPINDKLSKRMSDWNEKYMSSGAKEVLIKSVAQALPTYIMGVF 720

Query: 110  KLPVKVWKRVVRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAK 169
            K+  K      R+ R F WG  NG +KV W+ W  +  P+  GGLG RDMK  N +LLA+
Sbjct: 721  KMTDKFCDDYTRMVRNFWWGHDNGERKVHWIAWEKILYPKSHGGLGFRDMKCFNQALLAR 780

Query: 170  WRWRLVQPEQPL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFN 229
              WRL+     L   V + KY    N     +  ++ +++S  W  +       G +   
Sbjct: 781  QAWRLLTSPDSLCARVFKAKYYPNGNL----VDTAFPTVSSSVWKGIQH-----GLDLLK 831

Query: 230  REMVRKVGNGETTRFWLDHWV--GNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWR 287
            +  + +VGNG   + W   WV  G     L          +K+     ++V+   N   R
Sbjct: 832  QGTIWRVGNGHNIKIWRHKWVPHGEHINVL----------EKKGRNRLIYVNELINEENR 881

Query: 288  RSLFVWEEGLIHILLDELEGREV------SEPMDSW-WWKLEEGGICSVSSSYSLHVKL- 339
                 W E L+  +L E +  EV      +  MD +  W  E+ G+ +V S+Y L   L 
Sbjct: 882  ----CWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAYKLAWNLS 937

Query: 340  -----QMPPEPLENTKAMVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTES 394
                 Q       + +  ++  VW +    KV +F W+   D++PT +N  +R+I   E 
Sbjct: 938  GKGVVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKI---EM 994

Query: 395  SVRCVFCDQVGETAAHLFLHC 415
            +  C  C   GE + H  + C
Sbjct: 995  NGTCPVCGTKGENSYHATVEC 1015


>UniRef100_Q5XWR0 Hypothetical protein [Solanum tuberosum]
          Length = 327

 Score =  156 bits (394), Expect = 1e-36
 Identities = 86/247 (34%), Positives = 137/247 (54%), Gaps = 9/247 (3%)

Query: 88  GGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRIQREFLWGGVNGGKKVCWVKWATVCL 147
           GGR+ L+N+VL++IP ++++   +P KV +R+ +I+R+FLW G N   K+  VKWA V L
Sbjct: 72  GGRLTLINSVLDSIPTYFMSLLLMPAKVKQRLDKIRRDFLWEGNNKDHKIHLVKWAKVTL 131

Query: 148 PRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL*KDVLRCKYGSRINFLLDPIYNSWSS 207
           P+  GGLG++D+ L N  LL KW WR  Q    L K+V++ KYGS  ++  + +  S+ +
Sbjct: 132 PKQYGGLGIKDLALHNKCLLLKWHWRYNQEAAGLWKEVIQAKYGSDSHWCSNKVSTSYGT 191

Query: 208 LASRWWLDLMSLEGVVGANWFNREMVRKVGNGETTRFWLDHWVGNEALYLTFPRLFSISS 267
                W D+  L  +     F  +    VGNGE  +FW D W+G+  L   FP +F I+S
Sbjct: 192 GV---WRDIRKLWEI-----FFGDASLMVGNGEHIQFWKDIWLGDTPLMNVFPSIFLIAS 243

Query: 268 QKEAMVGEVWVDGDWNLTWRRSLFVWEEGLIHILLDELEGREV-SEPMDSWWWKLEEGGI 326
             ++ + +   D  WNL  RR+L  WE   +  L+  ++   + S+  D   W+    G 
Sbjct: 244 HPDSTISQYREDNVWNLILRRNLNDWELEEVFSLMATIQTSAINSQRRDKLIWRHSRDGS 303

Query: 327 CSVSSSY 333
            +V + Y
Sbjct: 304 YTVKACY 310


>UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]
          Length = 1205

 Score =  156 bits (394), Expect = 1e-36
 Identities = 109/391 (27%), Positives = 178/391 (44%), Gaps = 59/391 (15%)

Query: 52   LGLPVGANPRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKL 111
            LGLP      +   ++P+ +  +KRL  W  +++SL G+  L+ +V  A+P + +  FK+
Sbjct: 739  LGLPTPDGRMKAEQFQPIKERFEKRLTDWSERFLSLAGKEALIKSVAQALPTYTMGVFKM 798

Query: 112  PVKVWKRVVRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWR 171
            P +  +   ++ R F WG   G KKV W+ W  +  P+  GGLG RD++  N +LLA+  
Sbjct: 799  PERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRDIRCFNQALLARQA 858

Query: 172  WRLVQPEQPL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVV-GANWFNR 230
            WRL++    L   VL+ KY      + D    ++ S++S  W      +G+V G     +
Sbjct: 859  WRLIESPDSLCARVLKAKYYPN-GTITD---TAFPSVSSPTW------KGIVHGLELLKK 908

Query: 231  EMVRKVGNGETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSL 290
             ++ ++G+G  T+ W +HWV +            I  +K               TW R +
Sbjct: 909  GLIWRIGDGSKTKIWRNHWVAH-------GENLKILEKK---------------TWNRVI 946

Query: 291  FV----------WEEGLIHILLDELEGREV-------SEPMDSWWWKLEEGGICSVSSSY 333
            +V          W E LI  ++ E +  E+        E  D   W  E+ GI SV S Y
Sbjct: 947  YVRELIVTDTKTWNEPLIRHIIREEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSVY 1006

Query: 334  SLHVKLQMPPEPLENTKA------MVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKR 387
             L   L        ++ +       ++ +VWK+    KV VF+W+   DR+ T +N  KR
Sbjct: 1007 RLAWNLARKTSEQASSSSGGADGRKIWDNVWKANVQPKVRVFAWKLAQDRLATWENKKKR 1066

Query: 388  RILPTESSVRCVFCDQVGETAAHLFLHCDMS 418
            +I   E    C  C Q  ET  H  + C ++
Sbjct: 1067 KI---EMFGTCPICGQKEETGFHATVECTLA 1094


>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  155 bits (392), Expect = 2e-36
 Identities = 114/434 (26%), Positives = 194/434 (44%), Gaps = 30/434 (6%)

Query: 4    LLRGFEMASGLKVNFAKSCL-IGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANPRR 62
            ++  + +ASG +VN+ KS +  G ++  E        +          YLGLP      +
Sbjct: 702  IIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSK 761

Query: 63   LSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRI 122
            ++T   L D L K++  W + ++S GG+ +LL AV  A+P + ++ FK+P  + +++  +
Sbjct: 762  VATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESV 821

Query: 123  QREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL* 182
              EF W     G+ + W  W  +  P+  GGLG ++++  NI+LL K  WR++  +  L 
Sbjct: 822  MAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLM 881

Query: 183  KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKV-GNGET 241
              V + +Y S+     DP+     S  S  W  +   + ++      ++ +R V GNGET
Sbjct: 882  AKVFKSRYFSK----SDPLNAPLGSRPSFAWKSIYEAQVLI------KQGIRAVIGNGET 931

Query: 242  TRFWLDHWVG-NEALYLTFPRLFSISSQKEAMVGEVWVD------GDWNLTWRRSLFVWE 294
               W D W+G   A      +   + SQ  A    V  D       DWN  W     ++ 
Sbjct: 932  INVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWN--WNLVSLLFP 989

Query: 295  EGLIHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKL----QMPPEPLENTK 350
            +     +L    G +  E  D + W+    G  SV S Y +  ++      P E L+ + 
Sbjct: 990  DNTQENILALRPGGK--ETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL 1047

Query: 351  AMVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAH 410
              +F  +WK   P K+  F W+ + + +    NL  R +   +S   CV C   GET  H
Sbjct: 1048 DPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKS---CVRCPSHGETVNH 1104

Query: 411  LFLHCDMSFKVWSM 424
            L   C  +   W++
Sbjct: 1105 LLFKCPFARLTWAI 1118


>UniRef100_Q6ATM7 Hypothetical protein OSJNBb0021K20.15 [Oryza sativa]
          Length = 352

 Score =  152 bits (383), Expect = 2e-35
 Identities = 97/276 (35%), Positives = 143/276 (51%), Gaps = 17/276 (6%)

Query: 1   LKALLRGFEMASGLKVNFAKSCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANP 60
           LKALL+ F   +GLKVNF KSCLI +NV  +  +        R GS PF YLGLP+G   
Sbjct: 17  LKALLQSFAQGTGLKVNFHKSCLIPINVSEDKAEMLAGVFGYRTGSMPFTYLGLPLGTTK 76

Query: 61  RRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVV 120
            R+  + PL+D +++RL++  + ++S G R+ L+N+V +++P +Y+   +LP  V + + 
Sbjct: 77  PRVIDFAPLVDRIERRLSA-NSAFLSNGDRLTLMNSVFSSLPTYYMCILQLPKSVIENID 135

Query: 121 RIQREFLW--GGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPE 178
           R +R  LW  G +N  KK   V W  VC P+ KGGLGV ++ + N +LL K+  +     
Sbjct: 136 RARRHCLWRGGDINSNKK-SLVAWDKVCKPKVKGGLGVINLSIQNQALLLKFLDKFYNRR 194

Query: 179 QPL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKV-G 237
           Q     ++   Y       L PI  S+      WW D+  L  +       R + R + G
Sbjct: 195 QVPWVSLIWSSYYENKVPHLAPIKGSF------WWKDICKLMDIY------RGISRCILG 242

Query: 238 NGETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMV 273
           NG +  FW D W     L L  PRL S +  K   V
Sbjct: 243 NGSSCSFWDDIWSDGPPLSLHMPRLHSFAINKNVSV 278


>UniRef100_Q8H0A5 Putative reverse transcriptase [Oryza sativa]
          Length = 1557

 Score =  151 bits (381), Expect = 4e-35
 Identities = 114/430 (26%), Positives = 193/430 (44%), Gaps = 30/430 (6%)

Query: 1    LKALLRGFEMASGLKVNFAK-SCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
            +K +   +  ++G  +N  K S L G ++     DA  N +         +YLGLP    
Sbjct: 1068 IKEVFGSYATSTGQLINPTKCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLPTPGG 1127

Query: 60   PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
                  ++ L + + K++  WG  Y+S GG+ VL+ AV+ AIP + +  FKLP  V + +
Sbjct: 1128 RMHKGRFQSLRERIWKKILQWGENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDL 1187

Query: 120  VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
              + R F WG   G +K  W  W ++   +  GGLG +D++L N +LLA+  WRL+    
Sbjct: 1188 TSLTRNFWWGAEKGKRKTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPD 1247

Query: 180  PL*KDVLRCKY---GSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKV 236
             L   VL+ KY   GS ++        S+   AS  W  +       G     + ++ ++
Sbjct: 1248 SLCARVLKAKYYPNGSIVD-------TSFGGNASPGWQAIEH-----GLELVKKGIIWRI 1295

Query: 237  GNGETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGEVWVD-GDWNLTWRRSLFVWEE 295
            GNG + R W D W+  +   L+   +   ++ +   V ++ +D G W+      +F+  +
Sbjct: 1296 GNGRSVRVWQDPWLPRD---LSRRPITPKNNCRIKWVADLMLDNGMWDANKINQIFLPVD 1352

Query: 296  GLIHILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSL---HVKLQMPPEPLENTKAM 352
              + I+L         E  D   W  ++ G  SV ++Y L     K +      +     
Sbjct: 1353 --VEIILKLRTSSRDEE--DFIAWHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRK 1408

Query: 353  VFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLF 412
             +  +WK   P KV +F+W++  + +PT DN  KR +   E S  CV C    E   H  
Sbjct: 1409 AWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNL---EISDTCVICGMEKEDTMHAL 1465

Query: 413  LHCDMSFKVW 422
              C  +  +W
Sbjct: 1466 CRCPQAKHLW 1475


>UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  150 bits (380), Expect = 5e-35
 Identities = 129/429 (30%), Positives = 189/429 (43%), Gaps = 42/429 (9%)

Query: 12  SGLKVNFAKSCLI--GVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANPRRLSTWEPL 69
           SGLKVN  KS L   G+++      AA  F     G+ P +YLGLP+     R++ + PL
Sbjct: 586 SGLKVNKDKSQLFQAGLDLSERITSAAYGFP---AGTFPIRYLGLPLMCRKLRIADYGPL 642

Query: 70  LDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRIQREFLWG 129
           L+ L  RL SW +K +S  GR  L+++V+  + NF+++ F LP    K++  +  +FLW 
Sbjct: 643 LEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWA 702

Query: 130 GVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL*KDVLRCK 189
           G   G+K   V W   CLP+ +GGLG R     N +LL +  W L   +  L     R  
Sbjct: 703 GSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHH 762

Query: 190 YGSRINFLLDPIYNSWSSLASR---W-WLDLMSLEGVVGANWFNREMVRKVGNGETTRFW 245
                +F        W   A +   W W  L++L  +       + +  KVGNG T  FW
Sbjct: 763 RLGHASF--------WQVNALQTDPWTWKMLLNLRPLA-----EKFIKAKVGNGGTVSFW 809

Query: 246 LDHW--VGNEALYLTFPRLFSISSQKEAMVGEVWVDGDWNLTWRRSLFVWEEGLIHILLD 303
            D W  +G    YL       +     A V +      W L   RSL          +L 
Sbjct: 810 FDCWTSLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGWRLPLSRSL------TADSILS 863

Query: 304 ELEGREVSEPM---DSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAMVFGSVWKS 360
            L       P+   DS+ W +++      S++ +  V    P  P++        SVW  
Sbjct: 864 HLASLPPPSPLMVSDSYSWCVDDVDCQGFSAAKTWEV--LRPRRPVKRWAK----SVWFK 917

Query: 361 PTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDMSFK 420
               K     W + L+R+PT+  L+   ++   SS  C  C    ET  HL L CD S +
Sbjct: 918 GAVPKHAFNFWTAQLNRLPTRQRLVSWGLV---SSAECCLCSFDTETRDHLLLLCDFSSQ 974

Query: 421 VWSMVYCRL 429
           VW MV+ RL
Sbjct: 975 VWRMVFLRL 983


>UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thaliana]
          Length = 1213

 Score =  147 bits (372), Expect = 4e-34
 Identities = 127/431 (29%), Positives = 195/431 (44%), Gaps = 31/431 (7%)

Query: 5    LRGFEMASGLKVNFAKS--CLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANPRR 62
            L  F   SGLKVN  KS   L G+N      +AA  F     G+ P +YLGLP+     R
Sbjct: 719  LDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAYGFPI---GTLPIRYLGLPLMNRKLR 775

Query: 63   LSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRI 122
            ++ +EPLL+ +  R  SW NK +S  GR+ L+++V+    NF+++ F LP    KR+  +
Sbjct: 776  IAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESL 835

Query: 123  QREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL* 182
               FLW G     K   V WA +CLP+ +GGLG+R +   N +L  +  WRL   +  L 
Sbjct: 836  CSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLW 895

Query: 183  KDVLRCKYGSRINF--LLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNGE 240
             D     + SR +F  +     +SW+      W  L+SL  +      ++ +V KVGNG 
Sbjct: 896  ADWQHLHHLSRGSFWAVEGGQSDSWT------WKRLLSLRPLA-----HQFLVCKVGNGL 944

Query: 241  TTRFWLDHWVGNEALYLTFPRL--FSISSQKEAMVGEVWVDGDWNLTWRRSLFVWEEGLI 298
               +W D+W     L+     +   S+     A V   + +  W L   RS     +G+ 
Sbjct: 945  KADYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRS--APAKGIH 1002

Query: 299  HILLDELEGREVSEPMDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAMVFGSVW 358
              L          E +D + W +  G +C   S+     K      P    K+    S+W
Sbjct: 1003 DHLCTVPVPSTAQEDVDRYEWSV-NGFLCQGFSA----AKTWEAIRPKATVKSWA-SSIW 1056

Query: 359  KSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDMS 418
                  K     W S L+R+ T+  L     + +++   CV C    E+  HL L C+ S
Sbjct: 1057 FKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDA---CVLCSFASESRDHLLLICEFS 1113

Query: 419  FKVWSMVYCRL 429
             +VW +V+ R+
Sbjct: 1114 AQVWRLVFRRI 1124


>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
          Length = 1936

 Score =  147 bits (370), Expect = 7e-34
 Identities = 112/429 (26%), Positives = 195/429 (45%), Gaps = 28/429 (6%)

Query: 1    LKALLRGFEMASGLKVNFAK-SCLIGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
            +K +L  +   +G  +N AK S L G        +   N +     +   +YLG P    
Sbjct: 1339 VKEVLTNYAQGTGQLINPAKCSILFGEASPSSVSEDIRNTLQVERDNFEDRYLGFPTPEG 1398

Query: 60   PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
                  ++ L   + KR+  WG  ++S GG+ +L+ AV+ AIP + +  FK P  V+  +
Sbjct: 1399 RMHKGRFQSLQAKIAKRVIQWGENFLSSGGKEILIKAVIQAIPVYVMGLFKFPDSVYDEL 1458

Query: 120  VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
             ++ R F WG  NG ++  W  W ++   +  GGLG RD KL N +LL +  WRL++   
Sbjct: 1459 TKMTRNFWWGADNGRRRTHWRAWDSLTKAKINGGLGFRDYKLFNQALLTRQAWRLIEFPN 1518

Query: 180  PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNG 239
             L   VL+ KY      L D    ++S+ AS  W  +       G +   + ++ ++GNG
Sbjct: 1519 SLCAQVLKAKYFPH-GSLTD---TTFSANASPTWHGI-----EYGLDLLKKGIIWRIGNG 1569

Query: 240  ETTRFWLDHWVGNEALYLTFPRLFSISSQKEAMVGE-VWVDGDWNLTWRRSLFVWEEGLI 298
             + R W D W+  +   L+   + S ++ +   V + +  DG W+       F      +
Sbjct: 1570 NSVRIWRDPWIPRD---LSRRPVSSKANCRLKWVSDLIAEDGTWDSAKINQYF------L 1620

Query: 299  HILLDELEGREVSEPMDSWW--WKLEEGGICSVSSSYSLHVKLQMPPEPLENTKAMVFGS 356
             I  D ++   +S  ++  +  W  ++ G  SV S+Y L ++L        ++ + +  S
Sbjct: 1621 KIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKS 1680

Query: 357  ---VWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFL 413
               +WK   P KV +F+W+   + + T +N  KR +   E    C  CD+  E A H   
Sbjct: 1681 WELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNL---ERFDVCGICDREKEDAGHALC 1737

Query: 414  HCDMSFKVW 422
             C  +  +W
Sbjct: 1738 RCVHANSLW 1746


>UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  145 bits (367), Expect = 2e-33
 Identities = 108/435 (24%), Positives = 196/435 (44%), Gaps = 42/435 (9%)

Query: 1   LKALLRGFEMASGLKVNFAKSCL-IGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGAN 59
           L  +L  +  ASG  +NF KS +       R         +  R+     +YLGLP    
Sbjct: 594 LSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFG 653

Query: 60  PRRLSTWEPLLDVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRV 119
            R+   +  ++D ++++ +SW ++++S  G+ V+L AVL ++P + ++ FKLP  + +++
Sbjct: 654 RRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKI 713

Query: 120 VRIQREFLWGGVNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQ 179
             +   F W      +K  WV W+ +  P++ GGLG RD++  N SLLAK  WRL+   +
Sbjct: 714 QSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPE 773

Query: 180 PL*KDVLRCKYGSRINFLLDPIYNSWSSLASRWWLDLMSLEGVV--GANWFNREMVRKVG 237
            L   +L  KY    +F+   +     S  S  W  +++   ++  G  W        + 
Sbjct: 774 SLLSRILLGKYCHSSSFMECKL----PSQPSHGWRSIIAGREILKEGLGWL-------IT 822

Query: 238 NGETTRFWLDHWVG-NEALYLTFPRLFSISSQK-EAMVGEVWVDGDWNLTWRRSLFVWEE 295
           NGE    W D W+  ++ L    P L      +  A++ +  +  DWN            
Sbjct: 823 NGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQNTLQWDWN------------ 870

Query: 296 GLIHILLDELEG--REVSEP----MDSWWWKLEEGGICSVSSSYSLHVKLQMPPEPLENT 349
             I ++L   E   +++  P    +D   W   + G  +  S Y +     +   P+  T
Sbjct: 871 -KIAVILPNYENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYGI---ASVASIPIPQT 926

Query: 350 KAMVFGSVWKSPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAA 409
           +     ++WK  T  K+    W++ ++ +P    L++R I P+ +  RC       E+  
Sbjct: 927 QFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRC----GAPESTT 982

Query: 410 HLFLHCDMSFKVWSM 424
           HLF HC+ + +VW +
Sbjct: 983 HLFFHCEFAAQVWEL 997


>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score =  145 bits (365), Expect = 3e-33
 Identities = 112/425 (26%), Positives = 186/425 (43%), Gaps = 36/425 (8%)

Query: 12  SGLKVNFAKSCL-IGVNVGREFMDAACNFMNCREGSPPFQYLGLPVGANPRRLSTWEPLL 70
           SG  +N  KS +  G  V  E      N    +      +YLGLP      +   +  + 
Sbjct: 439 SGQMINSEKSAITFGAKVNEETKQWIMNRSGIQTEGGTGKYLGLPECFQGSKQVLFGFIK 498

Query: 71  DVLKKRLNSWGNKYVSLGGRVVLLNAVLNAIPNFYLAFFKLPVKVWKRVVRIQREFLWGG 130
           + L+ RL+ W  K +S GG+ +LL ++  A P + +  F+L   +  ++  +  +F W  
Sbjct: 499 EKLQSRLSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNS 558

Query: 131 VNGGKKVCWVKWATVCLPRDKGGLGVRDMKLVNISLLAKWRWRLVQPEQPL*KDVLRCKY 190
           V   KK+ W+    + LP+  GG G +D++  N +LLAK   RL      L   +L+ +Y
Sbjct: 559 VQDKKKIHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRY 618

Query: 191 GSRINFL-----LDPIYNSWSSLASRWWLDLMSLEGVVGANWFNREMVRKVGNGETTRFW 245
               +FL       P Y +W S+             + G       + + +GNGE T  W
Sbjct: 619 YMNSDFLSATKGTRPSY-AWQSI-------------LYGRELLVSGLKKIIGNGENTYVW 664

Query: 246 LDHWVGNEALYLTFPRLFSISSQKEAMVGEVW--VDGDWNLTWRRSLFVWEEGLIHILLD 303
           +D+W+ ++      P    I    +  V ++      +WNL   R LF W+E  I I+  
Sbjct: 665 MDNWIFDDK--PRRPESLQIMVDIQLKVSQLIDPFSRNWNLNMLRDLFPWKE--IQIICQ 720

Query: 304 ELEGREVSEPMDSWWWKLEEGGICSVSSSYSL---HVKLQMPPEPLENTKA-MVFGSVWK 359
           +   R ++   DS+ W     G+ +V S Y L    V  QM  E  E      +FG +W 
Sbjct: 721 Q---RPMASRQDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWN 777

Query: 360 SPTPFKVVVFSWQSLLDRIPTKDNLLKRRILPTESSVRCVFCDQVGETAAHLFLHCDMSF 419
             +  K+ VF W+ L   +  +D L  R +L  +    C  C +  ET  H+   C ++ 
Sbjct: 778 LNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDG---CSMCPEKNETLNHILFQCPLAR 834

Query: 420 KVWSM 424
           +VW++
Sbjct: 835 QVWAL 839


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.325    0.141    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 798,973,072
Number of Sequences: 2790947
Number of extensions: 35630965
Number of successful extensions: 83914
Number of sequences better than 10.0: 433
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 82959
Number of HSP's gapped (non-prelim): 712
length of query: 430
length of database: 848,049,833
effective HSP length: 130
effective length of query: 300
effective length of database: 485,226,723
effective search space: 145568016900
effective search space used: 145568016900
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)