Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146551.12 + phase: 0 /pseudo
         (447 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9M1P0 Hypothetical protein T18B22.40 [Arabidopsis tha...   288  3e-76
UniRef100_O04648 A_TM021B04.9 protein [Arabidopsis thaliana]          227  5e-58
UniRef100_Q7XUR9 OSJNBa0084K11.21 protein [Oryza sativa]              189  1e-46
UniRef100_Q5W6B8 Putative polyprotein [Oryza sativa]                  171  5e-41
UniRef100_Q8LMQ4 Hypothetical protein OSJNBa0011L14.7 [Oryza sat...   163  8e-39
UniRef100_Q5W6P9 Putative polyprotein [Oryza sativa]                  160  7e-38
UniRef100_Q5W652 Hypothetical protein OSJNBb0052F16.10 [Oryza sa...   160  7e-38
UniRef100_Q8L516 Putative transposase [Oryza sativa]                  147  6e-34
UniRef100_Q7XV92 OSJNBb0012E08.4 protein [Oryza sativa]               144  7e-33
UniRef100_Q75HL4 Expressed protein [Oryza sativa]                     139  2e-31
UniRef100_Q9FHY5 Emb|CAB72466.1 [Arabidopsis thaliana]                129  2e-28
UniRef100_Q8S9V9 P0519D04.27 protein [Oryza sativa]                   124  5e-27
UniRef100_Q7XPC6 OSJNBa0042N22.14 protein [Oryza sativa]              121  4e-26
UniRef100_Q9SY99 T25B24.14 protein [Arabidopsis thaliana]             117  9e-25
UniRef100_Q9LS62 Similarity to a DNAJ-like domain [Arabidopsis t...   107  9e-22
UniRef100_O48730 En/Spm-like transposon protein [Arabidopsis tha...   100  8e-20
UniRef100_Q6USA1 Transposase [Pharus latifolius]                       91  9e-17
UniRef100_Q6USA0 Transposase [Coix aquatica]                           90  1e-16
UniRef100_Q6US99 Transposase [Zea mays]                                89  3e-16
UniRef100_Q6USA5 Transposase [Arundinaria alpina]                      85  4e-15

>UniRef100_Q9M1P0 Hypothetical protein T18B22.40 [Arabidopsis thaliana]
          Length = 377

 Score =  288 bits (736), Expect = 3e-76
 Identities = 187/461 (40%), Positives = 229/461 (49%), Gaps = 130/461 (28%)

Query: 28  DEELYEAIYMYMMAIHALMHVVN------QFLNMMRGEHVERPLTRRRITSKGYDYIHKS 81
           D   Y+  +  M+   + M V N      +  N+   E +E    RR ++  GY+YI  +
Sbjct: 4   DLSFYDVFFNIMLCATSNMMVFNMENIGDEEENLNDREKIEAEDVRRSVSRVGYNYIQTA 63

Query: 82  LNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQNTRYCII 141
           L  +   FRQ+YRM P+VF KLC +I                                + 
Sbjct: 64  LTVNPAHFRQLYRMEPEVFHKLCDVI-------------------------------LLY 92

Query: 142 RNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKILYN*KYI 201
                  +      FHK LKAL  +AP+ MAKP   VPAKIREST FYPYFK        
Sbjct: 93  NGHISEIKLFYKHKFHKALKALAFVAPNWMAKPEVRVPAKIRESTSFYPYFK-------- 144

Query: 202 WPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTHIPALVR 261
                                                         + AIDGTHI A+V 
Sbjct: 145 --------------------------------------------DCIGAIDGTHIFAMVP 160

Query: 262 GRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALKRK-NGLKVPH 320
             D +S+R+R G ISQNVLAACNFDL+F+Y+LSGW+GSAHDSK+LNDAL R  N L+VP 
Sbjct: 161 TCDAASFRNRKGFISQNVLAACNFDLQFIYILSGWKGSAHDSKVLNDALTRNTNRLQVPE 220

Query: 321 G-------------------------------HGNDPENEKELFNLRHASLRNVVERIFG 349
           G                                G DP+ + ELFNLRHASLRNV+ERIFG
Sbjct: 221 GKFYLVDCGYANRRKFLAPFRRTRYHLQDFRGQGRDPKTQNELFNLRHASLRNVIERIFG 280

Query: 350 IFKSRFTIFKSAPPFLFKTQAELVLACAALHNFLRKECRSDEFPIEPS-NESSSSSSMLP 408
           IFKSRF IFKSAPP+ FKTQ ELVLACA LHNFL +ECRSDEFP E S NE +S      
Sbjct: 281 IFKSRFLIFKSAPPYPFKTQTELVLACAGLHNFLHQECRSDEFPPETSINEENSDD---- 336

Query: 409 IHEDNNDELNVQT---QEQEREDANIWRTNLGLDMWRDVQG 446
            +E+NN E N      + Q+RE AN WR  +  +MW D  G
Sbjct: 337 -NEENNYEENGDVGILESQQREYANNWRDTISHNMWMDATG 376


>UniRef100_O04648 A_TM021B04.9 protein [Arabidopsis thaliana]
          Length = 1609

 Score =  227 bits (579), Expect = 5e-58
 Identities = 128/263 (48%), Positives = 167/263 (62%), Gaps = 54/263 (20%)

Query: 61   VERPLTRRRITSKGYDYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTRFIC 120
            + RP+ RR+IT KG+ YI K+L  D   FRQ+YRM P+VF +LC +++ KT L  T  +C
Sbjct: 1088 IPRPM-RRQITKKGHAYIQKALKDDPIHFRQLYRMNPEVFAELCHLLQMKTGLKGTPHVC 1146

Query: 121  IEEMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPA 180
            +EEM+A+FL  VGQN+RYC   +TF RS+F+ S NFHK+L+ALN +AP LMAK T++VP+
Sbjct: 1147 VEEMVATFLITVGQNSRYCHTMDTFKRSKFSTSINFHKVLRALNMLAPTLMAKVTNTVPS 1206

Query: 181  KIRESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKG 240
            KI ++TRFYP                     + +D  G                      
Sbjct: 1207 KISKTTRFYP---------------------YFKDCVG---------------------- 1223

Query: 241  KHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSA 300
                     AIDGTHI A+V+G + +SYR+R G ISQNVLAACNFDLEF+YVLSGWEGSA
Sbjct: 1224 ---------AIDGTHINAMVQGPEKASYRNRKGVISQNVLAACNFDLEFIYVLSGWEGSA 1274

Query: 301  HDSKLLNDAL-KRKNGLKVPHGH 322
            HDSK+L DAL +R N L+VP G+
Sbjct: 1275 HDSKVLQDALTRRTNRLQVPEGN 1297


>UniRef100_Q7XUR9 OSJNBa0084K11.21 protein [Oryza sativa]
          Length = 377

 Score =  189 bits (481), Expect = 1e-46
 Identities = 139/421 (33%), Positives = 193/421 (45%), Gaps = 107/421 (25%)

Query: 58  GEHVERPLTRRRITSKGYDYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTR 117
           G  VER   R+RI     +Y+   +  +      + R+    F + C + R++  L DT 
Sbjct: 22  GPMVERD--RKRI-----EYLETKIWWNDTTCINMLRLRRASFFRFCKLFRDRGLLEDTI 74

Query: 118 FICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSS 177
            +CIEE +A FL  VG N R  ++R  F RS+   S  F+K+L A+  +  +L+  P+  
Sbjct: 75  HMCIEEQVAMFLHTVGHNLRNRLVRTNFDRSRETVSRYFNKVLHAIGELRDELIRPPSLD 134

Query: 178 VPAKIRESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACK 237
            P KI  + R+ PYFK                                            
Sbjct: 135 TPTKIAGNPRWDPYFK-------------------------------------------- 150

Query: 238 NKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWE 297
                     + AIDGTHI A VR    SS+R R    +QNV+AA +FDL F YVL+GWE
Sbjct: 151 --------DCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYVLAGWE 202

Query: 298 GSAHDSKLLNDALKRKNGLKVPHGH---------------------------------GN 324
           G+AHD+ +L DAL+R+NGL+VP G+                                 GN
Sbjct: 203 GTAHDAVVLRDALERENGLRVPQGNRLQGKYYLVDAGYGAKQGFLPPFRAVRYHLNEWGN 262

Query: 325 DP-ENEKELFNLRHASLRNVVERIFGIFKSRFTIFKSAPPFL-FKTQAELVLACAALHNF 382
           +P +NEKELFNLRH+SLR  VER FG  K RF +   A PF  F+TQ ++V+AC  +HN+
Sbjct: 263 NPVQNEKELFNLRHSSLRVTVERAFGSLKRRFKVLDDATPFFPFQTQVDIVVACCIIHNW 322

Query: 383 LRKECRSDEFPIEPSNESSSSSSMLPIHEDNNDELNVQTQEQEREDANIWRTNLGLDMWR 442
           +  +   DE  I P + SS         + N+  L VQ           +R  L   MW 
Sbjct: 323 VVND-GIDEL-IAPPDWSSEDIDESLTGQANDHALMVQ-----------FRQGLADQMWA 369

Query: 443 D 443
           D
Sbjct: 370 D 370


>UniRef100_Q5W6B8 Putative polyprotein [Oryza sativa]
          Length = 561

 Score =  171 bits (432), Expect = 5e-41
 Identities = 110/306 (35%), Positives = 145/306 (46%), Gaps = 82/306 (26%)

Query: 94  RMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFAAS 153
           R+    F + C + R++  L DT  +CIEE +A FL  VG N R  ++R  + RS    S
Sbjct: 28  RLRKGSFFRFCKLFRDRGLLEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVS 87

Query: 154 ENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKILYN*KYIWPITICCK*KFS 213
             F+K+L A+  +  +L+  P+   P KI  + R+ PYFK                    
Sbjct: 88  RYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPYFK-------------------- 127

Query: 214 QDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHG 273
                                             + AIDGTHI A VR    SS+R R  
Sbjct: 128 --------------------------------DCIGAIDGTHIRASVRKNVESSFRGRKS 155

Query: 274 RISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALKRKNGLKVPHGH----------- 322
             +QNV+AA +FDL F YVL+GWEG+AHD+ +L DAL+R+NGL VP G            
Sbjct: 156 HATQNVMAAVDFDLRFTYVLAGWEGTAHDAVVLRDALERENGLHVPQGKFYLVDAGYGAK 215

Query: 323 -----------------GNDP-ENEKELFNLRHASLRNVVERIFGIFKSRFTIFKSAPPF 364
                            GN+P +NEKELFNLRH+SLR  VER FG  K RF +   A PF
Sbjct: 216 QGFLPPFRAVRYHLKEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKVLDDATPF 275

Query: 365 L-FKTQ 369
             F+TQ
Sbjct: 276 FPFRTQ 281


>UniRef100_Q8LMQ4 Hypothetical protein OSJNBa0011L14.7 [Oryza sativa]
          Length = 1202

 Score =  163 bits (413), Expect = 8e-39
 Identities = 125/376 (33%), Positives = 168/376 (44%), Gaps = 103/376 (27%)

Query: 67  RRRITSKGYDY---IHKSLNGDSEIFR----------QVYRMYPDVFRKLCMIIREKTPL 113
           RRR + KG  Y   +H+ +   SE+ R          Q  RM   VF KLC  +R K  L
Sbjct: 557 RRRSSRKGVKYGPLVHRDVWRTSELIRLINISDRTCTQQLRMSRAVFYKLCARLRNKGLL 616

Query: 114 VDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAK 173
           VDT  + +EE +A FL+ VGQ+     +  +F RS    S  F  +L+A+  IA +L+  
Sbjct: 617 VDTFHVSVEEQVAMFLKKVGQHHSVSCVGFSFWRSGETVSRYFRIVLRAMCEIARELIYI 676

Query: 174 PTSSVPAKIRESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLK 233
            +++  +KI                                                   
Sbjct: 677 RSTNTHSKITSK------------------------------------------------ 688

Query: 234 RACKNKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVL 293
              KNK        + A+DGTHI A V  + V  +R R    +QNVLAA +FDL F+Y+L
Sbjct: 689 ---KNKFYPYFKDCIGALDGTHIRASVPAKKVDRFRGRKPYPTQNVLAAVDFDLRFIYIL 745

Query: 294 SGWEGSAHDSKLLNDALKRKNGLKV----------------------------------- 318
           +GWEGSAHDS +L DAL R NGLK+                                   
Sbjct: 746 AGWEGSAHDSLVLQDALSRPNGLKILEGKFFLADAGYAARPGILPSYRRVRYHLKEFRGP 805

Query: 319 --PHGHGNDPENEKELFNLRHASLRNVVERIFGIFKSRFTIFKSAPPFLFKTQAELVLAC 376
             PHG    P+  KELFN RH+SLR  +ER FG  K+RF I  + P    K Q+ +V+AC
Sbjct: 806 QGPHG-PQGPKCPKELFNYRHSSLRTTIERAFGALKNRFKILMNKPFIPLKAQSMVVIAC 864

Query: 377 AALHNFLRKECRSDEF 392
            ALHN++  E  SDEF
Sbjct: 865 CALHNWI-LENGSDEF 879


>UniRef100_Q5W6P9 Putative polyprotein [Oryza sativa]
          Length = 1067

 Score =  160 bits (405), Expect = 7e-38
 Identities = 115/342 (33%), Positives = 154/342 (44%), Gaps = 95/342 (27%)

Query: 132 VGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPY 191
           VG N R  ++R  F RS    S  F+K+L A+  +  +L+  P+   P KI  + R+ PY
Sbjct: 18  VGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPY 77

Query: 192 FKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAI 251
           FK                                                      + AI
Sbjct: 78  FK----------------------------------------------------DCIGAI 85

Query: 252 DGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALK 311
           DGTHI A VR    SS+R R    +QNV+AA +FDL F YVL+GWEG+ HD+ +L DAL+
Sbjct: 86  DGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYVLAGWEGTTHDAVVLRDALE 145

Query: 312 RKNGLKVPHGH----------------------------GNDP-ENEKELFNLRHASLRN 342
           R+N L+VP G                             GN+P +NEKELFNLRH+SLR 
Sbjct: 146 RENSLRVPQGKYYLVDAGYGAKQGFLPPFRAVRYHLNEWGNNPVQNEKELFNLRHSSLRV 205

Query: 343 VVERIFGIFKSRFTIFKSAPPFL-FKTQAELVLACAALHNFLRKECRSDEFPIEPSNESS 401
            VER FG  K RF +   A PF  F+TQ ++V+AC  +HN++  +   DE  I P + SS
Sbjct: 206 TVERAFGSLKRRFKVLDDATPFFPFRTQVDIVVACCIIHNWVVND-GIDEL-IAPPDWSS 263

Query: 402 SSSSMLPIHEDNNDELNVQTQEQEREDANIWRTNLGLDMWRD 443
                    + N+  L VQ           +R  L   MW D
Sbjct: 264 EDIDESLTGQANDHALMVQ-----------FRQGLADQMWAD 294


>UniRef100_Q5W652 Hypothetical protein OSJNBb0052F16.10 [Oryza sativa]
          Length = 1220

 Score =  160 bits (405), Expect = 7e-38
 Identities = 115/342 (33%), Positives = 154/342 (44%), Gaps = 95/342 (27%)

Query: 132 VGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPY 191
           VG N R  ++R  F RS    S  F+K+L A+  +  +L+  P+   P KI  + R+ PY
Sbjct: 171 VGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPY 230

Query: 192 FKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAI 251
           FK                                                      + AI
Sbjct: 231 FK----------------------------------------------------DCIGAI 238

Query: 252 DGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALK 311
           DGTHI A VR    SS+R R    +QNV+AA +FDL F YVL+GWEG+ HD+ +L DAL+
Sbjct: 239 DGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYVLAGWEGTTHDAVVLRDALE 298

Query: 312 RKNGLKVPHGH----------------------------GNDP-ENEKELFNLRHASLRN 342
           R+N L+VP G                             GN+P +NEKELFNLRH+SLR 
Sbjct: 299 RENSLRVPQGKYYLVDAGYGAKQGFLPPFRAVRYHLNEWGNNPVQNEKELFNLRHSSLRV 358

Query: 343 VVERIFGIFKSRFTIFKSAPPFL-FKTQAELVLACAALHNFLRKECRSDEFPIEPSNESS 401
            VER FG  K RF +   A PF  F+TQ ++V+AC  +HN++  +   DE  I P + SS
Sbjct: 359 TVERAFGSLKRRFKVLDDATPFFPFRTQVDIVVACCIIHNWVVND-GIDEL-IAPPDWSS 416

Query: 402 SSSSMLPIHEDNNDELNVQTQEQEREDANIWRTNLGLDMWRD 443
                    + N+  L VQ           +R  L   MW D
Sbjct: 417 EDIDESLTGQANDHALMVQ-----------FRQGLADQMWAD 447


>UniRef100_Q8L516 Putative transposase [Oryza sativa]
          Length = 535

 Score =  147 bits (371), Expect = 6e-34
 Identities = 90/210 (42%), Positives = 118/210 (55%), Gaps = 32/210 (15%)

Query: 238 NKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWE 297
           N G+      + AIDGTHI A VR    SS+R R    +QNV+AA +FDL F YVL+GWE
Sbjct: 47  NYGRSGETDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYVLAGWE 106

Query: 298 GSAHDSKLLNDALKRKNGLKVPHGH----------------------------GNDP-EN 328
           G+AHD+ +L DAL+R+NGL VP G                             GN+P +N
Sbjct: 107 GTAHDAVVLRDALERENGLHVPQGKFYLVDGGYGAKQGFLPPFRAVRYHLKEWGNNPVQN 166

Query: 329 EKELFNLRHASLRNVVERIFGIFKSRFTIFKSAPPFL-FKTQAELVLACAALHNFLRKEC 387
           EKELFNLRH+SLR  VER FG  K RF +   A PF  F+TQ ++V+AC  +HN++  + 
Sbjct: 167 EKELFNLRHSSLRITVERAFGSLKRRFKVLDDATPFFPFRTQVDIVVACCIIHNWVIND- 225

Query: 388 RSDEFPIEPSNESSSSSSMLPIHEDNNDEL 417
             DE  + PS+ SS      P  + N+  L
Sbjct: 226 GIDEL-VAPSDWSSEDIDESPTWQANDHAL 254



 Score = 38.5 bits (88), Expect = 0.39
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 103 LCMIIREK-----TPLVDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRS 148
           + MIIR +     +   DT  +CIEE +A FL  VG N R  ++R  +GRS
Sbjct: 1   MAMIIRSRKRTRGSRREDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYGRS 51


>UniRef100_Q7XV92 OSJNBb0012E08.4 protein [Oryza sativa]
          Length = 261

 Score =  144 bits (362), Expect = 7e-33
 Identities = 93/271 (34%), Positives = 125/271 (45%), Gaps = 81/271 (29%)

Query: 100 FRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKI 159
           F + C + R+   L DT  +CIEE +A FL  VG N R  ++R  + RS    S  F+K+
Sbjct: 34  FFRFCKLFRDCGLLEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYDRSGETVSRYFNKV 93

Query: 160 LKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGF 219
           L A+  +  +L+  P+   P KI  + R+ PYFK                          
Sbjct: 94  LHAIGELRDELIRPPSLDTPTKIAGNPRWDPYFK-------------------------- 127

Query: 220 ELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNV 279
                                       + AIDGTHI A +R    SS+R R    +QNV
Sbjct: 128 --------------------------DCIGAIDGTHIRASIRKNVESSFRGRKSHATQNV 161

Query: 280 LAACNFDLEFMYVLSGWEGSAHDSKLLNDALKRKNGLKVPHGH----------------- 322
           +AA +FDL F YVL+GWEG+ HD+ +L DAL+R+NGL VP G                  
Sbjct: 162 MAAVDFDLRFTYVLAGWEGTTHDAVVLRDALERENGLHVPQGKFYLVDAGYGAKQGFLPP 221

Query: 323 -----------GNDP-ENEKELFNLRHASLR 341
                      GN+P +NEKELFNLRH+SLR
Sbjct: 222 FRAVRYHLKEWGNNPVQNEKELFNLRHSSLR 252


>UniRef100_Q75HL4 Expressed protein [Oryza sativa]
          Length = 608

 Score =  139 bits (349), Expect = 2e-31
 Identities = 88/202 (43%), Positives = 113/202 (55%), Gaps = 40/202 (19%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           AIDGTH+ A V     SS+R R    +QNV+AA +FDL F YVL+GWEG+AHD  +L DA
Sbjct: 143 AIDGTHVRASVPKNMESSFRGRKNHATQNVMAAVDFDLRFTYVLAGWEGAAHDVVVLRDA 202

Query: 310 LKRKNGLKVPHGH----------------------------GNDP-ENEKELFNLRHASL 340
           L+R+NGL VP G                             GN+P +NEKELFNLRH+SL
Sbjct: 203 LERENGLHVPQGKFYLVDVGYGAKPGFLPPFRSTRYHLNEWGNNPVQNEKELFNLRHSSL 262

Query: 341 RNVVERIFGIFKSRFTIFKSAPPFL-FKTQAELVLACAALHNFLRKECRSDEFPIEPSNE 399
           R  VER FG  K RF I   A PF  F+TQ  +V+AC  +HN++  +   DE  + P NE
Sbjct: 263 RITVERAFGSLKRRFKILDDATPFFPFQTQVNIVVACCIIHNWVIND-DIDELVMGP-NE 320

Query: 400 SSSSSSMLPIHEDNNDELNVQT 421
           S        I +DN+   ++ T
Sbjct: 321 S--------IIQDNDTSTDMDT 334


>UniRef100_Q9FHY5 Emb|CAB72466.1 [Arabidopsis thaliana]
          Length = 374

 Score =  129 bits (324), Expect = 2e-28
 Identities = 71/162 (43%), Positives = 93/162 (56%), Gaps = 22/162 (13%)

Query: 251 IDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDAL 310
           +D  HIP +V   +   +R+ +G ++QNVLAA +FDL F YVL+GWEGSA D ++LN AL
Sbjct: 147 VDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAAL 206

Query: 311 KRKNGLKVPHG-------------------HG---NDPENEKELFNLRHASLRNVVERIF 348
            R+N L+VP G                   HG   N  E  KE+FN RH  L   + R F
Sbjct: 207 TRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGVSTNSREEAKEMFNERHKLLHRAIHRTF 266

Query: 349 GIFKSRFTIFKSAPPFLFKTQAELVLACAALHNFLRKECRSD 390
           G  K RF I  SAPP+  +TQ +LV+A  ALHN++R E   D
Sbjct: 267 GALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDD 308



 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 40/122 (32%), Positives = 63/122 (50%), Gaps = 5/122 (4%)

Query: 72  SKGYDYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQI 131
           S G  ++++ LNG +E   + +RM   VF KLC +++ +  L  T  I IE  LA FL I
Sbjct: 25  SDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFI 84

Query: 132 VGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPY 191
           +G N R   ++  F  S    S +F+ +L A+ +I+ D   +P S+      +     PY
Sbjct: 85  IGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFF-QPNSNSDTLENDD----PY 139

Query: 192 FK 193
           FK
Sbjct: 140 FK 141


>UniRef100_Q8S9V9 P0519D04.27 protein [Oryza sativa]
          Length = 538

 Score =  124 bits (311), Expect = 5e-27
 Identities = 70/149 (46%), Positives = 86/149 (56%), Gaps = 29/149 (19%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           AIDGTHI A VR    SS+R R    +QNV+AA +FDL F YVL+GWEG+AHD+ +L DA
Sbjct: 113 AIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYVLAGWEGTAHDAVVLRDA 172

Query: 310 LKRKNGLKVPHGH----------------------------GNDPENEKELFNLRHASLR 341
           L+R+NG+ VP G                             GN+P   +ELFNLRH+SLR
Sbjct: 173 LERENGIHVPQGKFYLVDAGYGAKQGFLPPFRAVRYHLKEWGNNPVQNEELFNLRHSSLR 232

Query: 342 NVVERIFGIFKSRFTIFKSAPPFL-FKTQ 369
             VER FG  K RF +   A PF  F+TQ
Sbjct: 233 ITVERAFGSLKRRFKVLDDATPFFPFRTQ 261


>UniRef100_Q7XPC6 OSJNBa0042N22.14 protein [Oryza sativa]
          Length = 401

 Score =  121 bits (304), Expect = 4e-26
 Identities = 86/281 (30%), Positives = 124/281 (43%), Gaps = 82/281 (29%)

Query: 123 EMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKI 182
           E +A FL   G N R  ++   F RS    S  F+ +L A+  +  +L+  P+ + P+KI
Sbjct: 45  EQVAMFLHTFGHNVRNRVVATNFYRSGETISRYFNLVLHAVGELRKELIRPPSITTPSKI 104

Query: 183 RESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKH 242
             +  + PYFK                                                 
Sbjct: 105 LGNPMWDPYFK------------------------------------------------- 115

Query: 243 KILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHD 302
                + AIDGTH+   V      S+R R    +QNV+AA +FDL+F YVL+GWE +AHD
Sbjct: 116 ---DCIGAIDGTHVRVSVTKDMELSFRGRKDHATQNVMAAIDFDLKFTYVLAGWETTAHD 172

Query: 303 SKLLNDALKRKNGLKVPHGH----------------------------GNDP-ENEKELF 333
           + +L D+++R +GL+VP G                             G++P +NEKELF
Sbjct: 173 AVVLRDSIERTDGLRVPQGKFYLVDVGYGAKPGFLPPFRGVRYHLNEWGSNPVQNEKELF 232

Query: 334 NLRHASLRNVVERIFGIFKSRFTIFKSAPPFL-FKTQAELV 373
           NLRH+SLR  V R F   K R+ I   A PF  + TQ ++V
Sbjct: 233 NLRHSSLRVTVARAFRSLKRRWKILDDASPFFPYPTQVDIV 273


>UniRef100_Q9SY99 T25B24.14 protein [Arabidopsis thaliana]
          Length = 404

 Score =  117 bits (292), Expect = 9e-25
 Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 81/331 (24%)

Query: 92  VYRMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFA 151
           + RM+   FR LC I+ E+  L ++  I +EE +A F+++V Q+    +I   +  S   
Sbjct: 71  ILRMHQSTFRTLCKILSEQYKLEESCNIYLEESVAMFIEMVAQDLTVRVIAERYQHSLET 130

Query: 152 ASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKILYN*KYIWPITICCK*K 211
                 ++L AL  +A D++ KPT        + T   P+   L N K   P  I C   
Sbjct: 131 VKRKLDEVLSALLKLAADIV-KPTRD------DVTGISPF---LVNDKRYMPYFIDC--- 177

Query: 212 FSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDR 271
                                               + A+DGTH+       DV  YR R
Sbjct: 178 ------------------------------------IGALDGTHVSVRPPSGDVERYRGR 201

Query: 272 HGRISQNVLAACNFDLEFMYVLSGWEGSAHDSK---------------------LLNDAL 310
               + N+LA CNF ++F     G  G AHD+K                     L++   
Sbjct: 202 KSEATMNILAVCNFSMKFNIAYVGVPGRAHDTKVLTYCATHEASFPHPPAGKYYLVDSGY 261

Query: 311 KRKNGLKVPH----------GHGNDPENEKELFNLRHASLRNVVERIFGIFKSRFTIF-K 359
             ++G   PH            G  P N +ELFN RH+SLR+V+ER FG++K+++ I  +
Sbjct: 262 PTRSGYLGPHRRTRYHLELFNRGGPPTNSRELFNRRHSSLRSVIERTFGVWKAKWRILDR 321

Query: 360 SAPPFLFKTQAELVLACAALHNFLRKECRSD 390
             P +  K   ++V +  ALHN++R   + D
Sbjct: 322 KHPKYEVKKWIKIVTSTMALHNYIRDSQQED 352


>UniRef100_Q9LS62 Similarity to a DNAJ-like domain [Arabidopsis thaliana]
          Length = 194

 Score =  107 bits (266), Expect = 9e-22
 Identities = 78/230 (33%), Positives = 102/230 (43%), Gaps = 78/230 (33%)

Query: 113 LVDTRFICIEEMLASFLQIVGQNTRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMA 172
           L DT  + +EEMLASFL I+GQN RY   ++ F RS+F+ S +F+ ILK LN  AP  MA
Sbjct: 3   LRDTMNVSVEEMLASFLFIIGQNLRYIQAQDRFKRSRFSISTSFNTILKVLNVFAPSYMA 62

Query: 173 KPTSSVPAKIRESTRFYPYFKILYN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNL 232
           KPT  VP KI+++TRFYP                     + +D  G              
Sbjct: 63  KPTLVVPTKIKDNTRFYP---------------------YFKDCVG-------------- 87

Query: 233 KRACKNKGKHKILSLLQAIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYV 292
                            AIDGTHIPA++ G++ +SY D            C F       
Sbjct: 88  -----------------AIDGTHIPAMITGKETASYLD------------CGF------- 111

Query: 293 LSGWEGSAHDSKLLNDALKRKNGLKVPHGHGNDPENEKELFNLRHASLRN 342
                  A+           +  L+   G G DP N+ ELFN RH+SLRN
Sbjct: 112 -------ANCRNCFALFRSTRYHLQDFRGQGKDPNNQNELFNHRHSSLRN 154


>UniRef100_O48730 En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 292

 Score =  100 bits (249), Expect = 8e-20
 Identities = 64/210 (30%), Positives = 97/210 (45%), Gaps = 39/210 (18%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLN-- 307
           A+DGTH+P     +    Y+ R    + NVLA CNFD++F+Y   G  G AHD+K+LN  
Sbjct: 47  ALDGTHVPVRPPSQTAKKYKGRKLEPTMNVLAICNFDMKFIYAYVGVPGRAHDTKVLNYC 106

Query: 308 -------------------DALKRKNGLKVPH----------GHGNDPENEKELFNLRHA 338
                                   + G   PH          G G  P   +ELFN +H+
Sbjct: 107 ATNEPYFSHPPNGKYYLVDSGYPTRTGYLGPHRRMRYHLGQFGRGGPPVTARELFNRKHS 166

Query: 339 SLRNVVERIFGIFKSRFTIF-KSAPPFLFKTQAELVLACAALHNFLRKECRSDEFPIEPS 397
            LR+V+ER FG++K+++ I  +  P +      ++V A  ALHNF+R   R D       
Sbjct: 167 GLRSVIERTFGVWKAKWRIVDRKHPKYGLAKWIKIVTATMALHNFIRDSHRED------- 219

Query: 398 NESSSSSSMLPIHEDNNDELNVQTQEQERE 427
           ++     S+   H D+ +E   +  E+E E
Sbjct: 220 HDFLQWQSIEEYHVDDEEEEEEEEGEEEEE 249


>UniRef100_Q6USA1 Transposase [Pharus latifolius]
          Length = 119

 Score = 90.5 bits (223), Expect = 9e-17
 Identities = 53/118 (44%), Positives = 63/118 (52%), Gaps = 30/118 (25%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           A+DGTHIPA V       +  R    +QNVLAA +FDL F+YVL+GWEGSAHDS +L+DA
Sbjct: 2   ALDGTHIPASVPTDMQDRFIGRKLYPTQNVLAAVDFDLRFVYVLAGWEGSAHDSYVLDDA 61

Query: 310 LKRKNGLKVPHGH------------------------------GNDPENEKELFNLRH 337
           L R  GLK+P GH                                 PE+EKELFN RH
Sbjct: 62  LSRPTGLKIPEGHYFLADAGYATRKGILPPYRGVRYHLNEYRGTRQPEDEKELFNPRH 119


>UniRef100_Q6USA0 Transposase [Coix aquatica]
          Length = 119

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 51/118 (43%), Positives = 61/118 (51%), Gaps = 30/118 (25%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           A+DGTHIPA V       +R R    +QNVLA  +FDL F+YVL+GWEGSAHDS +L DA
Sbjct: 2   ALDGTHIPACVPFHMQDRFRGRKSITTQNVLAVVDFDLRFIYVLAGWEGSAHDSYVLQDA 61

Query: 310 LKRKNGLKVPHGH------------------------------GNDPENEKELFNLRH 337
           L R NGL +P G                                 +PE+ KELFN RH
Sbjct: 62  LSRPNGLNIPEGKYFLADAGYAARPGVLPPYRGTRYHLQEYRGTREPESPKELFNPRH 119


>UniRef100_Q6US99 Transposase [Zea mays]
          Length = 117

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 51/116 (43%), Positives = 63/116 (53%), Gaps = 28/116 (24%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           A+DGTHI A V      S+  R    SQNV+AA +FDL F YVL+GWEGSAHD+ +L DA
Sbjct: 2   ALDGTHIRASVSIDMEPSFHGRKSYASQNVMAAVDFDLRFTYVLAGWEGSAHDALVLRDA 61

Query: 310 LKRKNGLKVPHGH----------------------------GNDPENEKELFNLRH 337
           L+R+NGL+VP G                             GN+P   +ELFN RH
Sbjct: 62  LERENGLRVPQGKFYLVDAGYGAKPGFLPPFRAVRYHLNEWGNNPVQNEELFNPRH 117


>UniRef100_Q6USA5 Transposase [Arundinaria alpina]
          Length = 119

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 30/118 (25%)

Query: 250 AIDGTHIPALVRGRDVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDA 309
           A+DGTH+ A V  +  +++R R G  +QNV+AA +FDL+F YVL+ WEGSAHD+ +L DA
Sbjct: 2   AMDGTHVLARVPTKVSAAFRGRKGTTTQNVMAAVDFDLKFTYVLACWEGSAHDALILADA 61

Query: 310 LKRKNGLKVP------------------------------HGHGNDPENEKELFNLRH 337
           L+R +GL+VP                              +G  N P  E+ELFN RH
Sbjct: 62  LERDDGLRVPQGKYYLVDAGYAARPGFLPPYRATRYHLREYGGRNYPRTERELFNSRH 119


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.326    0.140    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,615,560
Number of Sequences: 2790947
Number of extensions: 31651869
Number of successful extensions: 396154
Number of sequences better than 10.0: 1739
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 338330
Number of HSP's gapped (non-prelim): 25378
length of query: 447
length of database: 848,049,833
effective HSP length: 131
effective length of query: 316
effective length of database: 482,435,776
effective search space: 152449705216
effective search space used: 152449705216
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)


Medicago: description of AC146551.12