BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145218.7 - phase: 0 
         (2245 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 2343  0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                 1650  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   906  0.0
UniRef100_Q6L974 GAG-POL [Vitis vinifera]                             767  0.0
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      763  0.0
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   753  0.0
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]               701  0.0
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]                      699  0.0
UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]                  699  0.0
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]                  697  0.0
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               696  0.0
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]              695  0.0
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          694  0.0
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]                      693  0.0
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]                 692  0.0
UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]               691  0.0
UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]                      690  0.0
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]                  689  0.0
UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]               685  0.0
UniRef100_Q93Y89 Gag-pol [Oryza sativa]                               682  0.0

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 2343 bits (6072), Expect = 0.0
 Identities = 1229/2327 (52%), Positives = 1584/2327 (67%), Gaps = 155/2327 (6%)

Query: 7    QLRTELASLKEELAKANDVMTALLAAQEQSATAIPTTTAAPVTTSVLPTTSADNRFTMPV 66
            Q++TELA ++  +A+   +M  +   QE+    +    A          T   N+     
Sbjct: 3    QVQTELAEMRANMAQFMHMMQGVAQGQEELRALVQRQEAV---------TPPPNQ----- 48

Query: 67   GFPYGLPPFFTPVATASTSGTA-----------NNVLTPTTNAASIIATLPQTTVAVTEP 115
              P G P   TP A    +  A              + P    A +I    +  +    P
Sbjct: 49   ALPEGNPVHDTPAAAIPVNNYAVGEELMGIRVDGQPIAPDAANARVIHAPARNRI----P 104

Query: 116  LVHTLPQGININTQHRSIPVTK-TMEEMMEELAKELRH-EIQANRGNADSVKTQDLCLVS 173
            +V        + ++   IP      +  ++ LA+++R  E Q + G        ++ LV 
Sbjct: 105  IVDRQEDLFTMFSEDEDIPGRNDARDRKVDALAEKIRAMECQNSLG----FDVTNMGLVE 160

Query: 174  KVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYT 233
             + +P KFK P FD+YNG +CP+ H+  Y RK+  Y D++ + ++ FQDSL   + +WY 
Sbjct: 161  GLRIPYKFKAPSFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYM 220

Query: 234  SLSKNDIHTFDELATAFKSHYGFNTRLRPNREFLRSLSQKKEESFREYAQRWRGAAARIT 293
             L  + I  + +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ 
Sbjct: 221  ELKSDSIRCWRDLGEAFLRQYKHNMDMAPSRTQLQSLCQKSNESFKEYAQRWRELAARVQ 280

Query: 294  PALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESST 353
            P + E E+T  F+ TL+  +++RM      +FS++V  G R E  ++ G I     +  +
Sbjct: 281  PPMLERELTDMFIGTLQGVFMDRMGSCPFGSFSDVVICGERTESLIKTGKI----QDVGS 336

Query: 354  SASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQMPPSYPYMPYSQHPFFPPFYH 413
            S+SK+   G  +++E E   V     Q+        A  +P   P     Q    P    
Sbjct: 337  SSSKKPFAGAPRRREGETNAVQHRRDQNRIEYRQAAAVTIPAPQPRQQQQQRVQQP---- 392

Query: 414  QYPLPPGQPQVPVNAIAQQMKQQMPVQQQQQNQQARPTFPPIPMLYAELLPTLLQRGH-- 471
                             QQ +QQ P Q +Q+    R  F  +PM YAELLP LL+ G   
Sbjct: 393  -----------------QQQQQQRPYQPRQRMPDRR--FDSLPMSYAELLPELLRLGLVE 433

Query: 472  -CTTRQGKPPPDPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNV 530
             CT      PP  LPP + ++++CDFH GA GH  E C AL++ V+ LID   + F   V
Sbjct: 434  LCTMA----PPTVLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFAP-V 488

Query: 531  PHVLDNPFPNHAA--VNMIEVCEEAPRLD-VRNVATPLVPLHIKLCKASLFNHDHAKCLG 587
            P+V++NP P H    VN IE  E    +D V +V T L+ +  +L    +++     CLG
Sbjct: 489  PNVVNNPMPQHGGHRVNNIEGKEAEDLVDNVDDVQTSLLVVKSRLLNEGVYSGCDEDCLG 548

Query: 588  CLRDPLGCYTVQEDIQSLMNDNLLTVS-------DVCVIVPVF-----HDPPVKSTPLKK 635
            C     GC  ++  IQ +M++  L  S        V  I   F     H   V S P   
Sbjct: 549  CAESENGCDQLRAGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGHGQRVVSAPAT- 607

Query: 636  NAEPLVIRLP------------GPIPYVSDKAVPYKY-----------------NATMIE 666
            N  P+ I +P            G     + +AVP+KY                 N T + 
Sbjct: 608  NGTPVTIPVPVTISAPTTIVASGRRAVENSRAVPWKYDNAYRSNRRVESQTKPVNQTPVT 667

Query: 667  NGV--EVPLASFATVSNIAEGTSAALRSGKVRPPLFQKKVATPTIPPVEEATPTVVSPIA 724
             G+   VP      V N+  G     RSG++  P   +      +   +     VV    
Sbjct: 668  IGLANRVPATVGPAVDNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAK-GKQAVVEEEP 725

Query: 725  TDVNQPGKSIEDSNLDEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVL 784
                 P  S E  +++E +++IK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L
Sbjct: 726  VQKEAPEGSFE-KDVEEFMKMIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKML 784

Query: 785  EQAYVDHEVTVDRFGGIVGNITACNNLWFSEEELPEAGKSHNLALHISVNCKSDMISNVL 844
              AYV  E++V++  G++ N++  + + F+  +LP  G++HN ALHI++ CK  ++S+VL
Sbjct: 785  NLAYVPQEISVNQLEGVMANVSTRHGVGFTNLDLPPEGRNHNKALHITMECKGAVLSHVL 844

Query: 845  VDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVT 904
            VDTGSSLNV+PK  L ++   G +L  S  +V+AFD S+++V GE+ LP+ IGPE F + 
Sbjct: 845  VDTGSSLNVLPKQILKKIDVEGFVLTPSDLIVRAFDRSKRSVCGEVTLPVKIGPEVFDII 904

Query: 905  FQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSC 964
            F VMDI  +YSCLLGRPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  
Sbjct: 905  FYVMDIQPAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKY 964

Query: 965  IEA-GSAEGT---AFQGLTIEG---AESKEAGAAMASLKDARRAIQEGQTAGWGKVIQLC 1017
            +E  G    T    F+ + +E    AE ++ G ++ S K A+  +  G+  GWGK++ L 
Sbjct: 965  VEVDGEIHETLCQVFETVALEKVAYAEQRKPGVSITSYKQAKEVVDSGKAEGWGKMVDLP 1024

Query: 1018 ENKRKEGLGFSPSSRVSSG-----VFHSAGFVNAISEEAAGSG-----------LRPVFV 1061
              + K G+G+ P     +G      F SAG +N     A GS            +RP   
Sbjct: 1025 VKEDKFGVGYEPLQAEQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC-- 1082

Query: 1062 TPGGIASDWDAIDIPSIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDD--IPYE 1119
             PGG  ++W A ++  +  ++E +      + +      FD P+Y+AE+E  +D  +P E
Sbjct: 1083 APGGSINNWTAEEVVQVTLLTESDLMAFTMNGSVIAQYDFDNPIYQAEEESEEDCELPAE 1142

Query: 1120 ITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAW 1179
            + RLL+QE++ IQPHQEE+E++N+GTE+  REIKIGA LE+ VK+++I++LREY +IFAW
Sbjct: 1143 LVRLLKQEERVIQPHQEELEVVNLGTEDATREIKIGAALEDSVKRRLIEMLREYVEIFAW 1202

Query: 1180 SYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYP 1239
            SY+DMPGLD  IV HR+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP
Sbjct: 1203 SYQDMPGLDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYP 1262

Query: 1240 EWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSG 1299
             W+ANIVPVPKKDGKVRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSG
Sbjct: 1263 PWMANIVPVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSG 1322

Query: 1300 YNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVD 1359
            YNQIKM+PED EKT+FITPWGTFCYKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVD
Sbjct: 1323 YNQIKMAPEDMEKTTFITPWGTFCYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVD 1382

Query: 1360 DMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDK 1419
            DMI KS  EE+H+  L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP K
Sbjct: 1383 DMIAKSQTEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAK 1442

Query: 1420 VRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAF 1479
            V+AI+EMP P+TEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ + WND+CQ+AF
Sbjct: 1443 VKAIQEMPEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAF 1502

Query: 1480 DSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDC 1539
            D IK YL +PPIL+PPV GRPLIMYL+V + SMGCVLG+ DE+G+KEHAIYYLSKKFTDC
Sbjct: 1503 DKIKEYLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDESGRKEHAIYYLSKKFTDC 1562

Query: 1540 ETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLS 1599
            ETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+
Sbjct: 1563 ETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILT 1622

Query: 1600 EYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDP 1659
            EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMYLK KDC+EPL+ EGPDP
Sbjct: 1623 EYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDP 1682

Query: 1660 NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAID 1719
            + KW L+FDGAVN  G G+GAV+++P+G H+PF+AR+ F+ TNN AEYEACI GIEEAID
Sbjct: 1683 DDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAID 1742

Query: 1720 MRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMA 1779
            +RIK LDI+GDSALV+NQ+ G+W T+  +LIPYRDY RR+LT+F KV+L+H+PRDENQMA
Sbjct: 1743 LRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMA 1802

Query: 1780 DALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFL 1839
            DALATLSSM +VN WN VP + + RLERP++VFA   V       V+D KPWYYDIK FL
Sbjct: 1803 DALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESV-------VIDEKPWYYDIKNFL 1855

Query: 1840 LSREYPPGASKQDKKTLRRLASRFLLD-GDILYKRNYDMVLLRCVDEHEAEQLMHDVHDG 1898
             ++EYP GASK DKKTLRRLA  F L+  D+LYKRN+DMVLLRC+D  EA+ LM +VH+G
Sbjct: 1856 KTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEG 1915

Query: 1899 TFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPW 1958
            +FGTHA GH M++KLLRAGYYWM ME DC++YARKCHKCQIYAD++HVPP  LNVM+SPW
Sbjct: 1916 SFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPW 1975

Query: 1959 PFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRY 2018
            PF+MWGIDMIG+IEP ASNGHRFILVAIDYFTKWVEAASY N+TKQVV +FIK  IICRY
Sbjct: 1976 PFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRY 2035

Query: 2019 GVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVT 2078
            GVP +IITDNG+NLNN +++ LC++FKIEHHNSSPYRP+MNGAVEAANKNIK+IV+KMV 
Sbjct: 2036 GVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVV 2095

Query: 2079 TYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAE 2138
            TYKDWHEMLP+ALHGYRT+VR+STGATP+SLVYGMEAVLP+EVEIPSLRV+++ KL EAE
Sbjct: 2096 TYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAE 2155

Query: 2139 WCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPDP 2198
            W ++R+++L+LIEE+R+  +  GQ YQ RMK AFD+KV PR +++G+LVLKR +    D 
Sbjct: 2156 WIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDN 2215

Query: 2199 RGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            RGKWTPNYEGPYVVKK FSGGAL+LT MDG + P+PVN+D+VKKYFA
Sbjct: 2216 RGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYFA 2262


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 1650 bits (4273), Expect = 0.0
 Identities = 903/1854 (48%), Positives = 1191/1854 (63%), Gaps = 115/1854 (6%)

Query: 7    QLRTELASLKEELAKANDVMTALLAAQEQSATAIPTTTAA-PVTTSVLPTTSADNRFTMP 65
            Q++ ELA +K  +A+  ++M  +   QE+    +    AA P      P     N   + 
Sbjct: 3    QVQAELAEMKANMAQFMNMMQGVAQGQEELRALVQRQEAAIPPVNHAPPEGGPVNGNNVA 62

Query: 66   VGFPYGLPPFFTPVATASTSGTANNVLTPTTNAASIIATLPQTTVAVTEPLVHTLPQGIN 125
               P         +     +G           A    A  P   V   E +   L +  +
Sbjct: 63   AAVPINNYAVGDELGGIRINGQPIAPDVANARAVRAPARNPAPIVDRQEDMFSLLSEDED 122

Query: 126  INTQHRSIPVTKTMEEMMEELAKELRH-EIQANRGNADSVKTQDLCLVSKVDVPKKFKIP 184
            +      +      +  ++ LA+++R  E Q + G        ++ LV  + +P KFK P
Sbjct: 123  V------LGRVDERDRKVDALAEKIRAMECQNSLG----FDVTNMGLVEGLRIPYKFKAP 172

Query: 185  DFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFD 244
             FD+YNG +CP+ H+  Y RK+  Y D++ + ++ FQDSL   + +WY  L ++ I  + 
Sbjct: 173  SFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKRDSIRCWK 232

Query: 245  ELATAFKSHYGFNTRLRPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQT 304
            +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+T  
Sbjct: 233  DLGEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRELAARVQPPMLERELTDM 292

Query: 305  FLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSTSASKRYGNGHH 364
            F+ TL+  +++RM      +FS++V  G R E  ++ G I     ++ +S+SK+   G  
Sbjct: 293  FIGTLQGVFMDRMGSCPFVSFSDVVICGERTESLIKTGKI----QDAGSSSSKKPFAGAP 348

Query: 365  KKKETEVGMVSAGAGQSMATVAPINAAQMPPSYPYMPYSQHPFFPPFYHQYPLPPGQPQV 424
            +++E E   V     Q+ +    + A  +P                     P P  Q Q 
Sbjct: 349  RRREGETNAVQYRRDQNRSQRCQVAAVTIPA--------------------PQPRQQQQQ 388

Query: 425  PVNAIAQQMKQQMPVQQQQQNQQARPTFPPIPMLYAELLPTLLQRGHCTTRQGKPPPDPL 484
             V    QQ +QQ P Q +Q+    R  F  +PM YAELLP LL+ G    R    PP  L
Sbjct: 389  RVQQPQQQQQQQRPYQPRQRMPDRR--FDSLPMSYAELLPELLRLGMVELRT-MAPPTVL 445

Query: 485  PPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVPHVLDNPFPNHAA- 543
            PP + ++++CDFH GA GH  E C AL++ V+ LID   + F   VP+V++NP P H   
Sbjct: 446  PPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAP-VPNVVNNPMPQHGGH 504

Query: 544  -VNMIEVCE-EAPRLDVRNVATPLVPLHIKLCKASLFNHDHAKCLGCLRDPLGCYTVQED 601
             VN IE  E E   ++V +V T L+ +  +L    +++     CLGC     GC  ++  
Sbjct: 505  RVNNIEGKEAEDLVVNVDDVQTSLLVVKGRLLNGGVYSGCDEDCLGCAESENGCDQLRTG 564

Query: 602  IQSLMNDNLL----------TVSDVCVIVP--------VFHDPPVKSTPLKKN-----AE 638
            IQ +M++  L          TVS + +           V   P    TP+  +     + 
Sbjct: 565  IQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGRGQRVVSAPATNGTPVTISVPVTISA 624

Query: 639  PLVIRLPGPIPYVSDKAVPYKY-----------------NATMIENGV--EVPLASFATV 679
            P  I   G     + +AVP+KY                 N   +  G+   VP      V
Sbjct: 625  PTTIAASGRRAVENSRAVPWKYDNAYRSNRRAESQTRPVNQAPVTIGLPNRVPATVGPAV 684

Query: 680  SNIAEGTSAALRSGKVRPPLFQKKVATPTIPPVEEATPTVVSPIATDVNQPGKSIEDSNL 739
             N+  G     RSG++  P   +      +   +     VV         P  S E  ++
Sbjct: 685  DNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAK-GKQAVVEEEPVQKEAPEGSFE-KDV 741

Query: 740  DEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTVDRFG 799
            +E ++IIK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L  AYV  E++V++  
Sbjct: 742  EEFMKIIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQEISVNQLE 801

Query: 800  GIVGNITACNNLWFSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTL 859
            G++ N++  + + F+  +L   G++HN ALHI++ CK  ++S+VLVDTGSSLNV+PK  L
Sbjct: 802  GVMANVSTRHGVGFTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQIL 861

Query: 860  DQLSYRGTLLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLG 919
             ++   G +L  S  +V+AFDGS+++V GE+ LP+ IGPE F + F VMDI  +YSCLLG
Sbjct: 862  KKIDVEGFVLTPSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLG 921

Query: 920  RPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEA-GSAEGT---AF 975
            RPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  +E  G    T   AF
Sbjct: 922  RPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEIHETLCQAF 981

Query: 976  QGLTIEG---AESKEAGAAMASLKDARRAIQEGQTAGWGKVIQLCENKRKEGLGFSPSSR 1032
            + + +E    AE ++ GA++ S K A+  +  G+  GWGK++ L   + K G+G+ P   
Sbjct: 982  ETVALEKVAYAEQRKPGASITSYKQAKEVVDSGKAEGWGKMVYLPVKEDKFGVGYEPLQA 1041

Query: 1033 VSSG-----VFHSAGFVNAISEEAAGSG-----------LRPVFVTPGGIASDWDAIDIP 1076
              +G      F SAG +N     A GS            +RP    PGG  ++W A ++ 
Sbjct: 1042 EQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC--APGGSINNWTAEEVV 1099

Query: 1077 SIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDD--IPYEITRLLEQEKKAIQPH 1134
             +  ++E +      +++      F  P+Y+AE+E  +D  +P E+ RLL QE++ IQPH
Sbjct: 1100 QVTLLTESDLMAFTMNNSVMAQYDFGNPIYQAEEESEEDCELPAELVRLLRQEERVIQPH 1159

Query: 1135 QEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEH 1194
            QEE+E++N+GTE+ KREIKIGA LE+ VK+++I++LREY +IFAWSY+DMPGLD  IV H
Sbjct: 1160 QEELEVVNLGTEDAKREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDMPGLDTDIVVH 1219

Query: 1195 RIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGK 1254
            R+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP WVANIVPVPKKDGK
Sbjct: 1220 RLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWVANIVPVPKKDGK 1279

Query: 1255 VRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTS 1314
            VRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSGYNQIKM+PED EKT+
Sbjct: 1280 VRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIKMAPEDMEKTT 1339

Query: 1315 FITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEY 1374
            FITPWGTF YKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS  EE+H+  
Sbjct: 1340 FITPWGTFYYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEEHLVN 1399

Query: 1375 LTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQ 1434
            L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EMP P+TEKQ
Sbjct: 1400 LQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPKTEKQ 1459

Query: 1435 VRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVP 1494
            VRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ + WND+CQ+AFD IK YL +PPIL P
Sbjct: 1460 VRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPPILTP 1519

Query: 1495 PVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALA 1554
            PV GRPLIMYL+V + SMGCVLGQ DE+G+KEHAIYYLSKKFTDCETRY++LEKTCCALA
Sbjct: 1520 PVPGRPLIMYLSVTENSMGCVLGQHDESGRKEHAIYYLSKKFTDCETRYSLLEKTCCALA 1579

Query: 1555 WAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGS 1614
            WAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + +QKAIKGS
Sbjct: 1580 WAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKAIKGS 1639

Query: 1615 ILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAY 1674
            IL+D+LA QP++DYQP+ F+FPDE+IMYLK KDCEEPL+ EGPDP+ KW L+FDGAVN  
Sbjct: 1640 ILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWTLMFDGAVNMN 1699

Query: 1675 GKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALV 1734
            G G+GAV+++P+G HIPF+AR+ F+ TNN AEYEACI GIEEAID+RIK LDIYGDSALV
Sbjct: 1700 GNGVGAVLINPKGAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGDSALV 1759

Query: 1735 INQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSM 1788
            +NQ+ G+W T+  +LIPYRDY RR+LT+F KV L+H+PRDENQMADALATLSSM
Sbjct: 1760 VNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATLSSM 1813


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  906 bits (2342), Expect = 0.0
 Identities = 480/1140 (42%), Positives = 686/1140 (60%), Gaps = 37/1140 (3%)

Query: 1119 EITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFA 1178
            ++   L+Q     QP  +E+  +N+GTE++ R I +   L E  ++     L E+ D FA
Sbjct: 1759 DVAGALKQLDDGGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFA 1818

Query: 1179 WSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEY 1238
            W+Y++MPGLD  +  H++   P+  PV+Q  RR  P+   ++  EV + I+ GF+  ++Y
Sbjct: 1819 WTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQY 1878

Query: 1239 PEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFS 1298
            P W+ANIVPV KK+G+VR+CVDFRDLN+A PKD+FPLP  +++VD+T            S
Sbjct: 1879 PRWLANIVPVEKKNGQVRVCVDFRDLNRACPKDDFPLPITEMVVDSTTG------YGALS 1932

Query: 1299 GYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYV 1358
            GYNQIKM   D   T+F TP G F Y VMPFGL NAGATYQR M  +  D+IH  VE YV
Sbjct: 1933 GYNQIKMDLLDAFDTAFRTPKGNFYYTVMPFGLKNAGATYQRAMQFVLDDLIHHSVECYV 1992

Query: 1359 DDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPD 1418
            DDM+VK+ D E H E L  +FERLR+++L++NP KC F V+SG  LGF++  +GIE++P 
Sbjct: 1993 DDMVVKTKDHEHHQEDLRIVFERLRRHQLKMNPLKCAFAVQSGVFLGFVIRHRGIEIEPK 2052

Query: 1419 KVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEA 1478
            K++AI  MP PQ  K +R   G+L YI RFIS+++    P  KL++K  P VW++ECQ  
Sbjct: 2053 KIKAILNMPPPQELKDLRKLQGKLAYIRRFISNLSGRIQPFSKLMKKGTPFVWDEECQNG 2112

Query: 1479 FDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTD 1538
            FDSIK YLL PP+L  PV+GRPLI+Y+A    S+G +L Q ++ G KE A YYLS+    
Sbjct: 2113 FDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDEG-KEVACYYLSRTMVG 2171

Query: 1539 CETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLL 1598
             E  Y+ +EK C AL +A K+LRHY++ H   LI+R DPI+Y+  +  +TG++ +W +L+
Sbjct: 2172 AEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLSQPVLTGRLGKWALLM 2231

Query: 1599 SEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPD 1658
             EYDI F  QKAIKG  LA+ LA  P+ D  P+  + PDEEI   + ++           
Sbjct: 2232 MEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTAELQE----------- 2280

Query: 1659 PNSKWGLVFDGA----VNAYG-----KGIGAVIVSPQGHHIPFTARIL-FECTNNMAEYE 1708
               +W L FDGA    +N  G      G G V  +PQG  I  +  +L  EC+NN AEYE
Sbjct: 2281 ---QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYE 2337

Query: 1709 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVEL 1768
            A IFG+  A+ M ++ L  +GDS L+I QI   +E     L+PY   ARRL+  F  +E+
Sbjct: 2338 ALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYYTVARRLMDKFEHIEV 2397

Query: 1769 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDY 1828
             H+PR +N  ADALA L++       N   I+  +R   P+ +  I + ++    N  + 
Sbjct: 2398 IHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLELIPEEVNIIITNSAEE 2457

Query: 1829 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDM-VLLRCVDEHE 1887
            + W      +      P      +++ L+R    ++    +LYKR+Y   VLLRCVD  E
Sbjct: 2458 EDWRQPFLDYFKHGSLP--EDPVERRQLQRRLPSYIYKAGVLYKRSYGQEVLLRCVDRSE 2515

Query: 1888 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVP 1947
            A +++ +VH G  G H +G  M   +   GYYW  +  DC + A+ CH CQI+ +  H P
Sbjct: 2516 ANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCHGCQIHDNFKHQP 2575

Query: 1948 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2007
            P  L+     WPF  WGID+IG I P +S GHRFIL A DYF+KW EA     V    V 
Sbjct: 2576 PAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKWAEAVPLREVKSSDVI 2635

Query: 2008 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2067
             F++ +II R+GVP +I +DN     +  +    E++KI+ + S+ Y PQ NG  EA NK
Sbjct: 2636 NFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNK 2695

Query: 2068 NIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2126
             + +I++K V  + +DWH+ L  AL  YR TVR+ T ATP+SLVYG EAVLPLE+++PSL
Sbjct: 2696 TLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVYGNEAVLPLEIQLPSL 2755

Query: 2127 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGE- 2185
            RV +  +L++ E  + R+ +L+ +EE+R+ A+   + Y+  M  A+DK V  R F+ GE 
Sbjct: 2756 RVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRAYDKLVKQRVFRKGEL 2815

Query: 2186 -LVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2244
             LVL+R +      +GK+ P +EGPYV+++A+ GGA  L    G +   P+N   +KKYF
Sbjct: 2816 VLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQPMPPINGRFLKKYF 2875



 Score =  114 bits (284), Expect = 5e-23
 Identities = 86/289 (29%), Positives = 137/289 (46%), Gaps = 23/289 (7%)

Query: 684  EGTSAALRSGKVRPPLFQKKVATPTIP-PVEEATPTVVSPIATDVNQPGKSIEDSNLDEI 742
            E  + +LR GK  P   + KV  P +  P ++A+P   +P A +     K          
Sbjct: 1252 EEVNISLRGGKTLPDPHKSKV--PNVDKPAKKASPPGEAPEAPETKTGSKEKP------- 1302

Query: 743  LRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTVDRFGGIV 802
                   DYK++  L + P+ +SV   L+     R  L+K L+   V +EV + +   + 
Sbjct: 1303 -----AVDYKVLAHLKRIPALLSVYDALMMVPDLREALIKALQAPEV-YEVDMAKHR-LY 1355

Query: 803  GNITACNNLWFSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQL 862
             N    N + F++E+    G  HN  L+I  N  S  +  +L+D GS++N++P  +L + 
Sbjct: 1356 DNPLFVNEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLTRA 1415

Query: 863  SYRGTLLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPW 922
             +    L     ++  FD   K  LG I + I +   +F V F V++ N SYS LLGRPW
Sbjct: 1416 GFTTKDLEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGRPW 1475

Query: 923  IHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEAGSAE 971
            IH    V STLHQ LKF+        +G +  + S  S ++  E+  A+
Sbjct: 1476 IHKYRVVPSTLHQCLKFLDG------NGVQQRITSNFSPYTIQESYHAD 1518


>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
          Length = 1027

 Score =  767 bits (1980), Expect = 0.0
 Identities = 419/1063 (39%), Positives = 617/1063 (57%), Gaps = 39/1063 (3%)

Query: 1184 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1243
            M G+ P I  HR+       PVRQ++RR HPD    I+NE+ K ++AGF+  V YP+W+A
Sbjct: 1    MKGIHPSITSHRLNVVSTARPVRQRIRRFHPDRQRVIRNEIDKLLEAGFIREVSYPDWLA 60

Query: 1244 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1303
            N+V VPKK+GK R+CVD+ +LN A PKD+FPLP ID +VD+T+   + SF+D FSGY+QI
Sbjct: 61   NVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQGMLSFLDAFSGYHQI 120

Query: 1304 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1363
             MSP+D EK +FITP   +CYKVMPFGL NAGATYQR MT +F  +I   VEVY+DD++V
Sbjct: 121  PMSPDDEEKIAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVV 180

Query: 1364 KSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1423
            KS   EQH+ +L ++F  LR+Y ++LNP+KC FGV + K LGF+VSQ+GIEV PD+V+A+
Sbjct: 181  KSKTREQHILHLQEVFYLLRRYGMKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAV 240

Query: 1424 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1483
             E P P+ +K+++   G+L  + RFI+       P F  +RK     W D CQ A + IK
Sbjct: 241  METPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIK 300

Query: 1484 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRY 1543
            +YL++PPIL  P+    L MYLAV + ++  VL  +  + K++  IYY+S+   D ETRY
Sbjct: 301  HYLMQPPILSSPIPKEKLYMYLAVSEWAISAVL-FRCPSPKEQKPIYYVSRALADVETRY 359

Query: 1544 TMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDI 1603
            + +E    AL  AA++LR Y   H   ++    P++ I  K  +TG++ +W + LSE+ I
Sbjct: 360  SKMELISLALRSAAQKLRPYFQAHPV-IVLTDQPLRNILHKPDLTGRMLQWAIELSEFGI 418

Query: 1604 VFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKW 1663
             F+ + ++KG ++AD +          +E+                +P  +EG      W
Sbjct: 419  EFQPRLSMKGQVMADFV----------LEYS--------------RKPGQHEGSRKKEWW 454

Query: 1664 GLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIK 1723
             L  DGA  + G G+G ++ SP G H+    R+ F  +NN AEYEA + G++ A+ + + 
Sbjct: 455  TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 1724 HLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALA 1783
             L I+ DS LV+  ++ E+E   A +  Y    R  L  FT+  +  I R +N+ ADALA
Sbjct: 515  KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 1784 TLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSRE 1843
             +++   +     +P I +Q     S +     +         D + W  DI +++ +  
Sbjct: 575  GIAASLSIKEAILLP-IHVQTNPSVSEI----SICSTTEAPQADDQEWMNDITEYIRTGT 629

Query: 1844 YPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTH 1903
              PG  KQ  K +R  A+RF L G  LYKR++    LRC+   EA+ ++ ++H+G +G H
Sbjct: 630  L-PGDPKQAHK-VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNH 687

Query: 1904 ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMW 1963
            + G +++ +    GYYW  M+ +   Y ++C KCQ YA   H+P   L  +S PWPF+ W
Sbjct: 688  SGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQW 747

Query: 1964 GIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSK 2023
            G+D++ R  P A    +F+LVA DYF+KWVEA +Y +   + V KF+  NIICR+G+P  
Sbjct: 748  GMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQT 806

Query: 2024 IITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYK-D 2082
            II DNG   ++   +  C E  I +  S+P  PQ NG  EA NK +   ++K +   K  
Sbjct: 807  IIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGK 866

Query: 2083 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQS 2142
            W E LP  L  YRTT    TG TPF+L YGM+AV+P+E+ +P++     AK S+A     
Sbjct: 867  WVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLG 925

Query: 2143 RYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPD-PRGK 2201
            R   L+  +E R  A  R   YQ R    +++KV PR  K G LVL++      +   GK
Sbjct: 926  R--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGK 983

Query: 2202 WTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2244
            +  N+EGPY+V KA   GA  L  +DG  L  P N   +K+Y+
Sbjct: 984  FQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  763 bits (1970), Expect = 0.0
 Identities = 428/1113 (38%), Positives = 628/1113 (55%), Gaps = 41/1113 (3%)

Query: 1139 ELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1198
            E++NI   +  R + +GA +   ++ ++I LL+     FAWS EDM G+DP I  H +  
Sbjct: 759  EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 818

Query: 1199 KPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1258
             P   PV+QK R+  P+ A  +  EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 819  DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 878

Query: 1259 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1318
            VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M  +D+EKTSF+T 
Sbjct: 879  VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 938

Query: 1319 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKM 1378
             GT+CYKVM FGL NAGATYQR +  +  D I + VEVY+DDM+VKS   E HVE+L+K 
Sbjct: 939  RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 998

Query: 1379 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGF 1438
            F+ L  Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+  ++V+  
Sbjct: 999  FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1058

Query: 1439 LGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEG 1498
             GR+  ++RFIS  T  C P + LL++     W+ + +EAF+ +K+YL  PPILV P  G
Sbjct: 1059 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1118

Query: 1499 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1558
              L +Y+AV D ++  VL ++D    ++  I+Y SK   + ETRY ++EK   A+  +A+
Sbjct: 1119 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1176

Query: 1559 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1618
            +LR Y  +HT  +++   P++      + +G++ +W + LSEYDI F+ + A+K  +LAD
Sbjct: 1177 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1235

Query: 1619 HLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGI 1678
             L   PL   +        EE                       W L  DG+ +A G GI
Sbjct: 1236 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1272

Query: 1679 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1738
            G  +VSP    +  + R+ F  TNN+AEYE  I G+  A  M+I  +  + DS L+  Q+
Sbjct: 1273 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1332

Query: 1739 KGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVP 1798
             GE+E  +  +  Y    + +   F   +L  IPR +N  ADALA L+     +    +P
Sbjct: 1333 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALALTSDSDLRRIIP 1392

Query: 1799 I--IKMQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTL 1856
            +  I    ++    V  +  +      +  D   W  +I+ +L       G    DK T 
Sbjct: 1393 VESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYL-----SDGTLPSDKWTA 1447

Query: 1857 RRL---ASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKL 1913
            RRL   A+++ L  + L K +    +L C+   E  ++M + H+G  G H+ G  ++ KL
Sbjct: 1448 RRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRALALKL 1507

Query: 1914 LRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEP 1973
             + G+YW  M  DC  +  KC +CQ +A  IH P   L    +P+PF  W +D++G +  
Sbjct: 1508 KKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVGPM-- 1565

Query: 1974 KASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLN 2033
             AS   RFILV  DYFTKWVEA SY  +    V  F+   IICR+G+P +IITDNG+   
Sbjct: 1566 PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNGSQFI 1625

Query: 2034 NNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLPYALH 2092
            +   +  C  +KI  + S+P  PQ NG  EA NK I   ++K +   K  W + L   L 
Sbjct: 1626 SLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELDGVLW 1685

Query: 2093 GYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEE 2152
             YRTT RS+T  TPF+  YGMEA+ P EV   SLR  M  K  E    +   D+L+ +EE
Sbjct: 1686 SYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEE 1744

Query: 2153 KRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPD-PRGKWTPNYEGPYV 2211
             R  A+ R Q+YQ      +++KVH R F VG+LVL++      +   GK   N+EG Y 
Sbjct: 1745 IRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQ 1804

Query: 2212 VKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2244
            V K    G   L  M G  +P   N+  +K+Y+
Sbjct: 1805 VSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 7/176 (3%)

Query: 813 FSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRS 872
           F++ +L      HN  L + +      ++ VL+DTGSS++++ K  L  ++     ++  
Sbjct: 602 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 661

Query: 873 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 932
           +  +  FDG     +G I LPI +G     V F V+   A Y+ +LG PWIH   A+ ST
Sbjct: 662 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 721

Query: 933 LHQKLKFVKNGKLVTIHG-------EEAYLVSQLSSFSCIEAGSAEGTAFQGLTIE 981
            HQ +KF  +  + T+           +Y  S+L     +    ++ T   G+  E
Sbjct: 722 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAE 777



 Score = 48.1 bits (113), Expect = 0.003
 Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 5/220 (2%)

Query: 137 KTMEEMMEELAKELRHEIQANRGNADSVKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQ 196
           +T+ EM  ++ +      + +R   ++ +T     ++ V +    KI   + YNG   P+
Sbjct: 173 RTISEMSSKIHRATSTAPELDRVLEETQQTPFTRRITNVSIRGAQKIK-LESYNGRNDPK 231

Query: 197 NHIIKY---VRKMGNYKDN-DSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKS 252
             +  +   + +     DN D+     F + L   A  W++ L  N I +F +L ++F  
Sbjct: 232 EFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLK 291

Query: 253 HYGFNTRLRPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKD 312
           HY      + +   L S+SQ  +ES R +  R++     IT   +   +           
Sbjct: 292 HYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAIVALRNAVWYDSR 351

Query: 313 YVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 352
           + + + + AP+   + +   +R  E   + +I+  K  S+
Sbjct: 352 FRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 391


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  753 bits (1944), Expect = 0.0
 Identities = 419/1105 (37%), Positives = 632/1105 (56%), Gaps = 66/1105 (5%)

Query: 1147 ENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVR 1206
            ++  EI I   + +G +  +I+LL+E+ D F W Y +MPG    IVEHR+P KP   P +
Sbjct: 528  DDLEEIDISPAIGQG-RHLLIELLKEFRDCFTWEYYEMPGHSRSIVEHRLPLKPGVRPHQ 586

Query: 1207 QKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNK 1266
            Q  RR   DM   +K E+++  DAGF+    Y EWV++IVPV KK+GKVR+C+DFR LNK
Sbjct: 587  QLPRRCKADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFRYLNK 646

Query: 1267 ASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPW--GTFCY 1324
            A+PKD +P+   D LVD  +  K+ SFMDG +GYNQI M+ ED  KT+F  P   G F +
Sbjct: 647  ATPKDEYPMLVADQLVDAASGHKILSFMDGNAGYNQIFMAEEDIHKTTFRCPGAIGLFEW 706

Query: 1325 KVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRK 1384
             V+ F L +AGATYQR M  ++HD+I   VEVY+DD++VKS + E H+  L K+FER RK
Sbjct: 707  VVITFVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIADLRKVFERTRK 766

Query: 1385 YKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNY 1444
            Y L++NP KC FGV +G+ LGF+V ++GIEV    + AI+++  P+ + +++  +G++N+
Sbjct: 767  YGLKMNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKTELQEMIGKINF 826

Query: 1445 ISRFISHMTATCGPIFKLLR--KNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLI 1502
            + RFIS ++    P   LLR   +Q   W  E Q+A D+IK YL  PP+L+PP +G P  
Sbjct: 827  VRRFISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFR 886

Query: 1503 MYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 1562
            +YL+  D+S+  VL Q+ E  +KE  ++YLS++  + ETRY+ +EK C  L ++  RLRH
Sbjct: 887  LYLSAGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRH 944

Query: 1563 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 1622
            YL+++   +I + D +KY+     + G+I +W   L+E+D+ +++ KAIKG  +A+ +  
Sbjct: 945  YLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV- 1003

Query: 1623 QPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVI 1682
                       D+ D+ I               G      W L FDG+V  +G GIG VI
Sbjct: 1004 -----------DYRDDSI---------------GSVEVVPWTLFFDGSVCTHGCGIGLVI 1037

Query: 1683 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 1742
            +SP+G    F   I    TNN AEYEA + G++   ++    ++I GDS LVI+Q+ GE+
Sbjct: 1038 ISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEY 1097

Query: 1743 ETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKM 1802
            E  +  LI Y +  + L+  F  V L H+ R++N  A+ LA  +S +++       +IK 
Sbjct: 1098 ECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKH 1150

Query: 1803 QRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASR 1862
             ++E                  V+    W Y + Q+L         S+   + LR  A +
Sbjct: 1151 VQIEVA----------------VITADDWRYYVYQYLQD------PSQSASRKLRYKALK 1188

Query: 1863 FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMA 1922
            ++L  D LY R  D VLL+C+   +A+  + +VH+G  GTH + H M   L  AGY+W  
Sbjct: 1189 YILLDDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPT 1248

Query: 1923 MEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFI 1982
            M  DC++Y + C  CQ +      P  A+N +  PWPF  WGIDMIG I P +S GH+FI
Sbjct: 1249 MLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFI 1308

Query: 1983 LVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCE 2042
            LVA DYFTKWVEA     V      +F++ +II R G+P  I TD G+   ++      +
Sbjct: 1309 LVATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFAD 1368

Query: 2043 EFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSS 2101
               I+  NSSPY  Q NG  EA+NK++ +++++ ++ Y + WH  L  AL  YR     S
Sbjct: 1369 SMGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGS 1428

Query: 2102 TGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARG 2161
                P+ LVY  +A+LP EV I S R  ++  L+  E+     D+   + + R+ A+A+ 
Sbjct: 1429 IQVPPYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKV 1488

Query: 2162 QSYQARMKTAFDKKVHPREFKVGELVLK--RRVSQQPDPRGKWTPNYEGPYVVKKAFSGG 2219
               + R+   ++KKV P++F  GEL+ K    +  +    GKW+PN+EGP+ + K  S G
Sbjct: 1489 IKDKERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKG 1548

Query: 2220 ALILTHMDGVELPNPVNADIVKKYF 2244
            A +L  +DG      +N   +KKY+
Sbjct: 1549 AYMLQGLDGEVYDRALNGKYLKKYY 1573



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 50/179 (27%), Positives = 90/179 (49%), Gaps = 3/179 (1%)

Query: 817 ELPEAGKSHNLA-LHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFL 875
           E PE  ++ +L  L+I+       +S ++VD G+++N+MP  T  +L      L ++  +
Sbjct: 351 EKPEGTENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMV 410

Query: 876 VKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQ 935
           +K F G+    +G +++ +T+G +    TF V+D   SYS LLGR WIH    + ST+HQ
Sbjct: 411 LKDFGGNPSETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQ 470

Query: 936 KLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEAGSAEGTAFQGLTIEGAESKEAGAAMAS 994
            L     G  + I   ++ L  +  S+ C E        +   T++  + K+    M++
Sbjct: 471 CL-IQWQGDKIEIVPADSQLKMENPSY-CFEGVMEGSNVYTKDTVDDLDDKQGQGLMSA 527


>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
          Length = 1986

 Score =  701 bits (1808), Expect = 0.0
 Identities = 407/1139 (35%), Positives = 613/1139 (53%), Gaps = 53/1139 (4%)

Query: 1117 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1175
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1176 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1235
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1236 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1295
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1296 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1355
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1356 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1415
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1416 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1475
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1476 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1531
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1532 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1591
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1592 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEP 1651
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1652 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1711
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1712 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHI 1771
             G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1772 PRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKPW 1831
             R  N+ AD LA   S  R    +DV +   + L  P+             + V+    W
Sbjct: 1521 LRHNNEAADRLANFGSK-REAAPSDVFV---EHLYTPTVPHKDTTQDADTHDVVMVEADW 1576

Query: 1832 YYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQL 1891
                 +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL
Sbjct: 1577 REPFIRFLSSQELP--QDKDEAERISRRSKLYVMHESELYKKSPSGILQRCVSLEEGRQL 1634

Query: 1892 MHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHAL 1951
            + D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L
Sbjct: 1635 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1694

Query: 1952 NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIK 2011
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1695 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF- 1752

Query: 2012 NNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-- 2069
             NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I  
Sbjct: 1753 INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1812

Query: 2070 ---KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2126
                R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1813 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1872

Query: 2127 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2186
            R        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+L
Sbjct: 1873 RF---RNFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1929

Query: 2187 VLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            VL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1930 VLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1986



 Score = 52.0 bits (123), Expect = 2e-04
 Identities = 58/269 (21%), Positives = 113/269 (41%), Gaps = 15/269 (5%)

Query: 147 AKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVR 204
           A+   H    +  + D V   T DL    +VD P  FK    ++Y+G T P++ +  Y  
Sbjct: 401 ARGYHHSPDCHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGL 457

Query: 205 KMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNR 264
            +     ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  
Sbjct: 458 AIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGT 516

Query: 265 EF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPN 323
           ++ L ++ QK  ES REY +R+     +I+  + ++ +   F K ++ + +       P 
Sbjct: 517 QYDLYNVIQKSGESLREYIRRFSEQRNKISD-ISDDVIIAAFTKGIRHEELVGKFGRKPP 575

Query: 324 NFSEMVTMGTRLEEAVRDGIIVFEKAESS-----TSASKRYGNGHHKKKETEVGMVSAGA 378
              +++           D +   +++  S     T A+   G+ +HK ++ +   + A A
Sbjct: 576 RTVKLMFEKANEYAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATA 635

Query: 379 GQSMATVAPINAAQ--MPPSYPYMPYSQH 405
             S    + +N     M    P+ P S H
Sbjct: 636 AHSSRQRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
          Length = 1986

 Score =  699 bits (1804), Expect = 0.0
 Identities = 409/1139 (35%), Positives = 613/1139 (52%), Gaps = 53/1139 (4%)

Query: 1117 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1175
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1176 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1235
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1236 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1295
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1296 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1355
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1356 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1415
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1416 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1475
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1476 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1531
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1532 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1591
            +S+   D + RY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKARYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1592 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEP 1651
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1652 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1711
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1712 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHI 1771
             G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1772 PRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKPW 1831
             R  N+ AD LA   S  R    +DV +  +     P H     D  D     +V+   W
Sbjct: 1521 LRHNNEAADRLANFGSK-RETAPSDVFVEHLYTPTVP-HKDTTQDA-DTRNIAMVE-ADW 1576

Query: 1832 YYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQL 1891
                 +FL S+E P    K + + + R +  ++L    LYK++   +L RCV   E  QL
Sbjct: 1577 REPFIRFLTSQELP--QDKDEAERISRRSKLYVLHESELYKKSPSGILQRCVSLEEGRQL 1634

Query: 1892 MHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHAL 1951
            + D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L
Sbjct: 1635 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1694

Query: 1952 NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIK 2011
              +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F  
Sbjct: 1695 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF- 1752

Query: 2012 NNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-- 2069
             NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I  
Sbjct: 1753 INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1812

Query: 2070 ---KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2126
                R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1813 GIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1872

Query: 2127 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2186
            R        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+L
Sbjct: 1873 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1929

Query: 2187 VLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            VL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1930 VLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1986



 Score = 50.4 bits (119), Expect = 6e-04
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 15/269 (5%)

Query: 147 AKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVR 204
           A+   H    +  + D V   T DL    +VD P  FK    ++Y+G T P++ +  Y  
Sbjct: 401 ARGYHHSPDRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGL 457

Query: 205 KMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNR 264
            +     ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  
Sbjct: 458 AIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGT 516

Query: 265 EF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPN 323
           ++ L ++ QK  ES R+Y +R+     +I+   D + +   F K ++ + +       P 
Sbjct: 517 QYDLYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPP 575

Query: 324 NFSEMVTMGTRLEEAVRDGIIVFEKAESS-----TSASKRYGNGHHKKKETEVGMVSAGA 378
              +++           D +   +++  S     T A+   G+ +HK ++ +   + A A
Sbjct: 576 RTVKLMFEKANEYAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATA 635

Query: 379 GQSMATVAPINAAQ--MPPSYPYMPYSQH 405
             S    + +N     M    P+ P S H
Sbjct: 636 AHSSRQRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 46.6 bits (109), Expect = 0.009
 Identities = 33/117 (28%), Positives = 54/117 (45%), Gaps = 5/117 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSY-RGTLLRRSTFLVKAFDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +   R  L   +        G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 951
            ENF    ++F+V D   +Y  +LG P +    AV    +  +K      ++T+  +
Sbjct: 844 RENFRTENISFEVADFETAYHAILGHPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 900


>UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]
          Length = 1991

 Score =  699 bits (1804), Expect = 0.0
 Identities = 405/1139 (35%), Positives = 613/1139 (53%), Gaps = 53/1139 (4%)

Query: 1117 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1175
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 896  PRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 951

Query: 1176 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1235
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 952  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1011

Query: 1236 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1295
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1012 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1071

Query: 1296 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1355
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1072 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1131

Query: 1356 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1415
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1132 AYVDDVVVKTKQKDDLILDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1191

Query: 1416 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1475
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1192 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1251

Query: 1476 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1531
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1252 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1311

Query: 1532 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1591
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1312 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1370

Query: 1592 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEP 1651
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1371 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1416

Query: 1652 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1711
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1417 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1465

Query: 1712 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHI 1771
             G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H+
Sbjct: 1466 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1525

Query: 1772 PRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKPW 1831
             R  N+ AD LA   S  R    +DV +   + L  P+        +    +  +    W
Sbjct: 1526 LRHNNEAADRLANFGSK-REAAPSDVFV---EHLYSPTVPHKDATQVADTHDIAMVEADW 1581

Query: 1832 YYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQL 1891
               + +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL
Sbjct: 1582 REPLIRFLTSQELP--QYKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1639

Query: 1892 MHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHAL 1951
            + D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L
Sbjct: 1640 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1699

Query: 1952 NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIK 2011
              +   WPF++WG+DM+G  + KA  G+  + +AID F+KW+EA     +T      F  
Sbjct: 1700 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFMAIDKFSKWIEAKPVVTITADNARDFF- 1757

Query: 2012 NNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-- 2069
             NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I  
Sbjct: 1758 INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1817

Query: 2070 ---KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2126
                R+  ++      W   LP  L   RTT   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1818 RIKARVFDRLKPYAGKWVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1877

Query: 2127 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2186
            R        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+L
Sbjct: 1878 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1934

Query: 2187 VLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            VL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1935 VLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHIRRFYA 1991



 Score = 51.6 bits (122), Expect = 3e-04
 Identities = 60/274 (21%), Positives = 112/274 (39%), Gaps = 15/274 (5%)

Query: 142 MMEELAKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHI 199
           M    A+   H       + D V   T DL    +VD P  FK    ++Y+G T P++ +
Sbjct: 401 MQRRAARGRHHSPDRYDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWL 457

Query: 200 IKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTR 259
             Y   +     ++  M +    +L + A  W   L +  I ++ EL   F +++   T 
Sbjct: 458 TVYGLAIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTF 516

Query: 260 LRPNREF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMI 318
            RP  ++ L ++ QK  ES REY +R+     +I+   D + +   F K ++ + +    
Sbjct: 517 ERPGTQYDLYNVIQKSGESLREYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKF 575

Query: 319 IAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS-----TSASKRYGNGHHKKKETEVGM 373
              P    +++           D +   +++  S     T A+   G+ +HK ++ +   
Sbjct: 576 GRKPPRTVKLMFEKANEYAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEE 635

Query: 374 VSAGAGQSMATVAPINAAQ--MPPSYPYMPYSQH 405
           + A A  S    + +N     M    P+ P S H
Sbjct: 636 LVATAAHSSRQRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 951
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K      ++T+  +
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 905


>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
          Length = 2001

 Score =  697 bits (1800), Expect = 0.0
 Identities = 394/1098 (35%), Positives = 621/1098 (55%), Gaps = 56/1098 (5%)

Query: 1152 IKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1211
            I IG  LE+ ++++I+++++E   +FAWS +++ G+D  ++EH +  K    P +QKLRR
Sbjct: 956  ILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIEHNLAIKSGYKPKKQKLRR 1015

Query: 1212 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1271
               D     K E++K + A  +  V +PEW+AN V V K +GK RMC+DF DLNKA PKD
Sbjct: 1016 MSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKD 1075

Query: 1272 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1331
            +FPLP ID LVD TA  ++ SF+D +SGY+Q+ M  ED EKTSFITP+GT+C+  MPFGL
Sbjct: 1076 DFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGL 1135

Query: 1332 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNP 1391
             NAGAT+ R +  +    + + VE Y+DD++VKS     H + L + FE LRK  ++LNP
Sbjct: 1136 KNAGATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNP 1195

Query: 1392 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1451
             KC FGVR+GKLLGF+VS++GIE +PDK+ AI +M  P+  ++V+   GR+  +SRF+S 
Sbjct: 1196 EKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPKNTREVQRLTGRMASLSRFLSK 1255

Query: 1452 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1511
                  P FK LR      W  ECQ+AFD +K YL E P L  P +G+PL+MY+A    +
Sbjct: 1256 SAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPAT 1315

Query: 1512 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1571
            +  VL Q++E   ++  +Y++S+     +TRY+ +EK   A+  A+++LRHY ++H   +
Sbjct: 1316 VSAVLVQEEE--NRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDITI 1373

Query: 1572 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPI 1631
             S   PI  +     V G+IA+W M L  +D+ + ++ AIK  +LAD +A     ++ P 
Sbjct: 1374 PSAY-PIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVA-----EWTPN 1427

Query: 1632 EFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIP 1691
            E +         + ++ ++P           W +  DGA NA G G  AV+ +P    + 
Sbjct: 1428 EVE---------QQEEVKKP-----------WIVFSDGACNAAGAGAAAVVKTPMKQTLK 1467

Query: 1692 FTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIP 1751
            ++ +++F  TNN AEYE  +  + +A  +  + L +  DS LV       +E     +  
Sbjct: 1468 YSVQLVFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKEETMAK 1527

Query: 1752 YRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFR--VNHWNDVPIIKMQRLERPS 1809
            Y + AR    +F  + +  I R+EN  AD LA  ++  +   N + D+       + +PS
Sbjct: 1528 YLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDI-------ITQPS 1580

Query: 1810 HVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDI 1869
            +       I + G+       W   I ++L+S + P    +++ K ++ ++ ++ +    
Sbjct: 1581 YEKKEVACIQREGD-------WREPILKYLVSAQLP--EKEEEAKRIQLMSKKYKVVEGQ 1631

Query: 1870 LYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQ 1929
            LYK      LL+CV   E  +++ ++H+G  G H    +++ K++R G YW  +  D  +
Sbjct: 1632 LYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPWSVASKVIRQGIYWPTIMKDTEK 1691

Query: 1930 YARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 1989
            Y + C  CQ +      PP  L  +   WPF  WGID++G + P+A    RF++VAI+YF
Sbjct: 1692 YIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPL-PRAKGDLRFVIVAIEYF 1750

Query: 1990 TKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHH 2049
            ++W+EA +   +T   V KF+  NIICR+G+P +I+ DNG    +   Q +C+   ++ +
Sbjct: 1751 SRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQIN 1810

Query: 2050 NSSPYRPQMNGAVEAANKNIKRIVQKMV--TTYKDWHEMLPYALHGYRTTVRSSTGATPF 2107
             +S   PQ NG VE AN  I   ++K +  +    W E L   L   RTTV  STG TPF
Sbjct: 1811 FASVGHPQTNGVVERANGKIMEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTGMTPF 1870

Query: 2108 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQAR 2167
             LVYG EA+ P EV   S R+I + K  E      R   L +++E R++A+ +  SY   
Sbjct: 1871 RLVYGDEAMTPSEVGAHSPRMIFDQKDEE-----GREITLEMLDEIRVEALEKMASYTEG 1925

Query: 2168 MKTAFDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMD 2227
             K+ +++KV  R  + G+LVLK+ +++     GK    +EGP++VKK    GA  L ++D
Sbjct: 1926 TKSYYNQKVKTRPIEEGDLVLKKVLNEV--AVGKLESKWEGPFIVKKKTETGAFKLAYLD 1983

Query: 2228 GVELPNPVNADIVKKYFA 2245
            G EL +  NA  +KK++A
Sbjct: 1984 GEELKHTWNAVSLKKFYA 2001



 Score = 44.3 bits (103), Expect = 0.044
 Identities = 31/132 (23%), Positives = 60/132 (44%), Gaps = 4/132 (3%)

Query: 825 HNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKAFDGSRK 884
           H   L +SV      +  VL+D GSS +V+      ++      L  +   ++ F G + 
Sbjct: 772 HQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQV 831

Query: 885 NVLGEIDLPITIGPENFL----VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFV 940
           + +G+I L +  G    +    + F V+D+   Y+ +LGR  I+   A+    +  +K  
Sbjct: 832 HAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLP 891

Query: 941 KNGKLVTIHGEE 952
               ++T+ GE+
Sbjct: 892 GLRGVITVRGEQ 903


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  696 bits (1796), Expect = 0.0
 Identities = 405/1109 (36%), Positives = 599/1109 (53%), Gaps = 55/1109 (4%)

Query: 1153 KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPGLDPMIVEHRIPTKPECPPV 1205
            KI  + E   K K I L    P       DIFAW   DMPG+   ++EH +  K +  P+
Sbjct: 944  KISKSGESEAKTKKIPLDPSDPTKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPI 1003

Query: 1206 RQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLN 1265
            +Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLN
Sbjct: 1004 KQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN 1063

Query: 1266 KASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1325
            K+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY 
Sbjct: 1064 KSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYV 1123

Query: 1326 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKY 1385
             MPFGL NAGATYQR +   F   I + VE YVDD++VK+  ++  +  L + F  +R +
Sbjct: 1124 TMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAF 1183

Query: 1386 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYI 1445
            +++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +
Sbjct: 1184 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1243

Query: 1446 SRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYL 1505
            SRF+S +     P FKLL+K     W  E Q+AF+  K  L EPP+L  P    PL++Y+
Sbjct: 1244 SRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYV 1303

Query: 1506 AVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1561
            +   + +  VL  +++E G   K +  IY++S+   D +TRY  ++K    +    ++L 
Sbjct: 1304 SATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLS 1363

Query: 1562 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1621
            HY   H+  +++   P+  I     V G+IA+W + L   DI FK + +IK   LAD +A
Sbjct: 1364 HYFQGHSVTVVTSF-PLGDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA 1422

Query: 1622 YQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAV 1681
                 ++   + D P E + +                    W + FDG+    G G G V
Sbjct: 1423 -----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVV 1457

Query: 1682 IVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGE 1741
            ++SP G  + +   I F  ++N+AEYEA + G+  AI + IK L + GDS LV+NQ+  E
Sbjct: 1458 LISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKE 1517

Query: 1742 WETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIK 1801
            W     N++ YR   R+L   F  +EL H+ R  N+ AD LA   S  R    +DV +  
Sbjct: 1518 WSYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDVFV-- 1574

Query: 1802 MQRLERPSHVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLAS 1861
             + L  P+        +    +  +    W   + +FL S+E P    K + + + R + 
Sbjct: 1575 -EHLYTPTVPHKDTTQVAGTHDAAMVEVDWREPLIRFLTSQELP--QDKDEAERISRRSK 1631

Query: 1862 RFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWM 1921
             ++L    LYK++   +L RCV   E  QL+ D+H G  G HA   T+  K  R G++W 
Sbjct: 1632 LYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWP 1691

Query: 1922 AMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRF 1981
                D  +  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  
Sbjct: 1692 TAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTH 1750

Query: 1982 ILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALC 2041
            + VAID F+KW+EA     +T      F   NI+ R+GVP++IITDNGT     V +  C
Sbjct: 1751 LFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFC 1809

Query: 2042 EEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRT 2096
            E+F I+   +S   P  NG VE AN  I      R+  ++      W + LP  L   RT
Sbjct: 1810 EDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRT 1869

Query: 2097 TVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMD 2156
            T   +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE R  
Sbjct: 1870 TPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREA 1926

Query: 2157 AMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAF 2216
            A+ R   Y   ++   ++ V  R F VG+LVL++   Q    R K +P +EGP+++ +  
Sbjct: 1927 ALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVT 1984

Query: 2217 SGGALILTHMDGVELPNPVNADIVKKYFA 2245
              G+  L   DG  + N  N + +++++A
Sbjct: 1985 RPGSYRLKREDGTLVDNSWNIEHLRRFYA 2013



 Score = 51.2 bits (121), Expect = 4e-04
 Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 18/267 (6%)

Query: 152 HEIQANRGNAD----SVKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMG 207
           H    NR + D    +  T DL    +VD P  FK    ++Y+G T P++ +  Y   + 
Sbjct: 404 HHHSPNRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIR 460

Query: 208 NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNREF- 266
               ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  ++ 
Sbjct: 461 AAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYD 519

Query: 267 LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFS 326
           L ++ QK  ES R+Y +R+     +I+   D + +   F K ++ + +       P    
Sbjct: 520 LYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPRTV 578

Query: 327 EMVTMGTRLEEAVRDGIIVFE------KAESSTSASKRYGNGHHKKKETEVGMVSAGAGQ 380
           +++           D +   +      K    T A+   G+ +HK ++ +   + A A  
Sbjct: 579 KLMFEKANEYAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASH 638

Query: 381 SMATVAPINAAQ--MPPSYPYMPYSQH 405
           S    + +N     M    P+ P S H
Sbjct: 639 SSRQRSRVNTFDKIMNSQCPHHPNSNH 665



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
          Length = 2010

 Score =  695 bits (1794), Expect = 0.0
 Identities = 409/1130 (36%), Positives = 605/1130 (53%), Gaps = 60/1130 (5%)

Query: 1135 QEEIELINIGTEENKREI-KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPG 1186
            +E+I L      E +    KI  + E   K K I L    P       DIFAW   DMPG
Sbjct: 922  REDIRLAAATASEGEEPATKISKSGESEAKTKKIPLDPSDPAKTANNKDIFAWKPSDMPG 981

Query: 1187 LDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIV 1246
            +   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V
Sbjct: 982  IPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPV 1041

Query: 1247 PVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMS 1306
             V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++ 
Sbjct: 1042 LVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGRELLSFLDCYSGYHQIRLK 1101

Query: 1307 PEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKST 1366
              D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE YVDD++VK+ 
Sbjct: 1102 ESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTK 1161

Query: 1367 DEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREM 1426
             ++  +  L + F  +R ++++LNP KCTFGV SGKL+GF+VS +GI+ +P+KV AI  M
Sbjct: 1162 QKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVSHRGIQANPEKVTAILNM 1221

Query: 1427 PAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYL 1486
              P T+K V+   G +  +SRF+S +     P FKLL+K     W  E Q+AF+  K  L
Sbjct: 1222 KPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLL 1281

Query: 1487 LEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETR 1542
             EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY++S+   D +TR
Sbjct: 1282 TEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTR 1341

Query: 1543 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1602
            Y  ++K    +    ++L HY   H+  +++   P+  I       G+IA+W + L   D
Sbjct: 1342 YPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLD 1400

Query: 1603 IVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSK 1662
            I FK + +IK   LAD +A     ++   + D P E + +                    
Sbjct: 1401 ISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------------------- 1435

Query: 1663 WGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRI 1722
            W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA + G+  AI + I
Sbjct: 1436 WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGI 1495

Query: 1723 KHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADAL 1782
            K L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H+ R  N+ AD L
Sbjct: 1496 KRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRL 1555

Query: 1783 ATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDY--KPWYYDIKQFLL 1840
            A   S   V   +DV +  +     P       D    AG + V      W   + +FL 
Sbjct: 1556 ANFGSKREVAP-SDVFVEHLYTPTVPHK-----DTTQVAGTHDVAMVETDWREPLIRFLT 1609

Query: 1841 SREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTF 1900
            S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL+ D+H G  
Sbjct: 1610 SQELP--QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHSGIC 1667

Query: 1901 GTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPF 1960
            G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L  +   WPF
Sbjct: 1668 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPF 1727

Query: 1961 SMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGV 2020
            ++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   NI+ R+GV
Sbjct: 1728 AVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGV 1785

Query: 2021 PSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQK 2075
            P++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I      R+  +
Sbjct: 1786 PNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDR 1845

Query: 2076 MVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLS 2135
            +      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SLR        
Sbjct: 1846 LKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFR 1902

Query: 2136 EAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQ 2195
            E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F VG+LVL++   Q 
Sbjct: 1903 EERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQT 1960

Query: 2196 PDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
               R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1961 TRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2010



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%)

Query: 152 HEIQANRGNAD----SVKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMG 207
           H    NR + D    +  T DL    +VD P  FK    ++Y+G T P++ +  Y   + 
Sbjct: 401 HHHSPNRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIR 457

Query: 208 NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNREF- 266
               ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  ++ 
Sbjct: 458 AAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYD 516

Query: 267 LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFS 326
           L ++ QK  ES R+Y +R+     +I+   D + +   F K ++ + +       P    
Sbjct: 517 LYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKP---- 571

Query: 327 EMVTMGTRLEEAVRDGIIVFEKAESSTSASKRYGNGHHKKKET 369
             +T+    E+A       + KAE + +ASK+ G    + K T
Sbjct: 572 -PMTVKLMFEKANE-----YAKAEDAVTASKQSGPSWKQNKGT 608



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 782 LRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 841

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 842 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 885


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  694 bits (1790), Expect = 0.0
 Identities = 399/1091 (36%), Positives = 588/1091 (53%), Gaps = 70/1091 (6%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+  MCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+KV AI  M +P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1212 ANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDSFRWGPE 1271

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1530
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1272 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1331

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1332 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1390

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1391 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1437

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1438 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1485

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1486 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1545

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFA---------IGDVIDQA 1821
            + R  N+ AD LA   S               +R   PS VF            D    A
Sbjct: 1546 VLRHNNEAADRLANFGS---------------KREAAPSDVFVEHLYSPTVPHKDATQAA 1590

Query: 1822 GENVVDY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVL 1879
            G + V      W   + +FL S+E P    K + + + R +  ++L    LYK++   +L
Sbjct: 1591 GAHDVAMVEADWREPLIRFLTSQELP--QDKDEAERISRRSKLYVLHEAELYKKSPSGIL 1648

Query: 1880 LRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQI 1939
             RCV   E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ 
Sbjct: 1649 QRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQF 1708

Query: 1940 YADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYT 1999
            +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA    
Sbjct: 1709 FARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVV 1767

Query: 2000 NVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 2059
             +T      F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  N
Sbjct: 1768 TITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSN 1826

Query: 2060 GAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGME 2114
            G VE AN  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG E
Sbjct: 1827 GQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAE 1886

Query: 2115 AVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDK 2174
            A+LP EVE  SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++
Sbjct: 1887 AMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNR 1943

Query: 2175 KVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNP 2234
             V  R F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N 
Sbjct: 1944 NVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNS 2001

Query: 2235 VNADIVKKYFA 2245
             N + +++++A
Sbjct: 2002 WNIEHLRRFYA 2012



 Score = 51.2 bits (121), Expect = 4e-04
 Identities = 58/270 (21%), Positives = 110/270 (40%), Gaps = 16/270 (5%)

Query: 147 AKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVR 204
           A+   H    +  + D V   T DL    +VD P  FK    ++Y+G T P++ +  Y  
Sbjct: 400 ARGYHHSPDRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGL 456

Query: 205 KMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNR 264
            +     ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  
Sbjct: 457 AIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGT 515

Query: 265 EF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPN 323
           ++ L ++ QK  ES R+Y +R+     +I+   D + +   F K ++ + +       P 
Sbjct: 516 QYDLYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPP 574

Query: 324 NFSEMVTMGTRLEEAVRDGIIVFE------KAESSTSASKRYGNGHHKKKETEVGMVSAG 377
              +++           D +   +      K    T A+   G+ +HK ++ +   + A 
Sbjct: 575 RTVKLMFEKANEYAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVAT 634

Query: 378 AGQSMATVAPINAAQ--MPPSYPYMPYSQH 405
           A  S    + +N     M    P+ P S H
Sbjct: 635 ASHSSRQRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
          Length = 2026

 Score =  693 bits (1788), Expect = 0.0
 Identities = 397/1082 (36%), Positives = 588/1082 (53%), Gaps = 52/1082 (4%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1530
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDY-- 1828
            + R  N+ AD LA   S   V   +DV +  +     P       D    AG + V    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAP-SDVFVEHLYTPTVPHK-----DTTQVAGTHDVAMVE 1604

Query: 1829 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEA 1888
              W   + +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E 
Sbjct: 1605 ADWREPLIRFLTSQELP--QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEG 1662

Query: 1889 EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPP 1948
             QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1663 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1722

Query: 1949 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAK 2008
              L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1723 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAPD 1781

Query: 2009 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKN 2068
            F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE AN  
Sbjct: 1782 FF-INIVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERANGM 1840

Query: 2069 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2123
            I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1841 ILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1900

Query: 2124 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKV 2183
             SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F V
Sbjct: 1901 ESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLV 1957

Query: 2184 GELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2243
            G+LVL++   Q    R K +P +EGP+++      G+  L   DG  + N  N + ++++
Sbjct: 1958 GDLVLRK--IQTTRDRHKLSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHLRRF 2015

Query: 2244 FA 2245
            +A
Sbjct: 2016 YA 2017



 Score = 52.4 bits (124), Expect = 2e-04
 Identities = 49/197 (24%), Positives = 88/197 (43%), Gaps = 13/197 (6%)

Query: 174 KVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYT 233
           +VD P  FK    ++Y+G T P++ +  Y   +     +   M +    +L + A  W  
Sbjct: 431 RVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLH 490

Query: 234 SLSKNDIHTFDELATAFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYAQRWRGAAARI 292
            L +  I ++ EL   F +++   T  RP  +F L ++ QK  ES R+Y +R+     +I
Sbjct: 491 GLPRGTIGSWAELRDHFIANFQ-GTFERPGTQFDLYNVVQKSGESLRDYIRRFSEQRNKI 549

Query: 293 TPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 352
           +   D + +   F K ++ + +       P       T+    E+A       + KAE +
Sbjct: 550 SDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKANE-----YAKAEDA 598

Query: 353 TSASKRYGNGHHKKKET 369
            +ASK+ G     KK+T
Sbjct: 599 VTASKQSGPSWKPKKDT 615



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
          Length = 2017

 Score =  692 bits (1786), Expect = 0.0
 Identities = 400/1085 (36%), Positives = 588/1085 (53%), Gaps = 58/1085 (5%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFHWGPE 1276

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1530
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEDGHVQKVQRPIY 1336

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY   H   +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PLGDILHNREANGR 1395

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKVEH-------- 1442

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDY-- 1828
            + R  N+ AD LA   S   V   +DV +  +     P       D    AG + V    
Sbjct: 1551 VLRHNNKAADRLANFGSKREVAP-SDVFVEHLYAPTVPHK-----DTTQVAGTHDVAMVE 1604

Query: 1829 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLASR---FLLDGDILYKRNYDMVLLRCVDE 1885
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1886 HEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1945
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1946 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 2005
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2006 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2065
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 ARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2066 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2120
            N  I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2121 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 2180
            VE  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2181 FKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2240
            F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLIDNSWNIEHL 2012

Query: 2241 KKYFA 2245
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 49.7 bits (117), Expect = 0.001
 Identities = 51/241 (21%), Positives = 99/241 (40%), Gaps = 11/241 (4%)

Query: 174 KVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYT 233
           +VD P  FK    ++Y+G T P++ +  Y   +     +   M +    +L + A  W  
Sbjct: 431 RVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLH 490

Query: 234 SLSKNDIHTFDELATAFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYAQRWRGAAARI 292
            L +  I ++ EL   F +++   T  RP  ++ L ++ QK  ES R+Y +R+     +I
Sbjct: 491 GLPRGTIESWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKI 549

Query: 293 TPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFE----- 347
           +   D + +   F K ++ + +       P    +++           D +   +     
Sbjct: 550 SDITD-DVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGPS 608

Query: 348 -KAESSTSASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQ--MPPSYPYMPYSQ 404
            K    T A+   G+ +HK ++ +   + A A  S    + +N     M    P+ P S 
Sbjct: 609 WKPNKGTPATGGGGSNNHKDRKRKPEELVATATHSSRQRSRVNTFDKIMNSQCPHHPNSN 668

Query: 405 H 405
           H
Sbjct: 669 H 669



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]
          Length = 1950

 Score =  691 bits (1784), Expect = 0.0
 Identities = 398/1082 (36%), Positives = 586/1082 (53%), Gaps = 52/1082 (4%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 910  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 969

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 970  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1029

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1030 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1089

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1090 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1149

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1150 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1209

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLG-QQDETG---KKEHAIY 1530
             Q+AF+  K  L EPPIL  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1210 AQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1269

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1270 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1328

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1329 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1375

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1376 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1423

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1424 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1483

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDY-- 1828
            + R  N+ AD LA   S  R    +DV +  +     P       D    A  + V    
Sbjct: 1484 VLRHNNEAADRLANFGSK-REMAPSDVFVEHLYTPTVPHK-----DTTQDADTHDVALVE 1537

Query: 1829 KPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEA 1888
              W     +FL S+E P    K + + + R +  + +    LYK++   +L RCV   E 
Sbjct: 1538 ADWREPFIRFLTSQELPQ--DKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSLEEG 1595

Query: 1889 EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPP 1948
             QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1596 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1655

Query: 1949 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAK 2008
              L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1656 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1714

Query: 2009 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKN 2068
            F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  
Sbjct: 1715 FF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1773

Query: 2069 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2123
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1774 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1833

Query: 2124 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKV 2183
             SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F V
Sbjct: 1834 ESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLV 1890

Query: 2184 GELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2243
            G+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1891 GDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 1948

Query: 2244 FA 2245
            +A
Sbjct: 1949 YA 1950



 Score = 51.2 bits (121), Expect = 4e-04
 Identities = 58/270 (21%), Positives = 110/270 (40%), Gaps = 16/270 (5%)

Query: 147 AKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVR 204
           A+   H    +  + D V   T DL    +VD P  FK    ++Y+G T P++ +  Y  
Sbjct: 338 ARGYHHSPDRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGL 394

Query: 205 KMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNR 264
            +     ++  M +    +L + A  W   L +  I ++ EL   F +++   T  RP  
Sbjct: 395 AIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGT 453

Query: 265 EF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPN 323
           ++ L ++ QK  ES R+Y +R+     +I+   D + +   F K ++ + +       P 
Sbjct: 454 QYDLYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPP 512

Query: 324 NFSEMVTMGTRLEEAVRDGIIVFE------KAESSTSASKRYGNGHHKKKETEVGMVSAG 377
              +++           D +   +      K    T A+   G+ +HK ++ +   + A 
Sbjct: 513 RTVKLMFEKANEYTKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVAT 572

Query: 378 AGQSMATVAPINAAQ--MPPSYPYMPYSQH 405
           A  S    + +N     M    P+ P S H
Sbjct: 573 ASHSSRQRSRVNTFDKIMNSQCPHHPNSNH 602



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 722 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 781

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 782 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 825


>UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]
          Length = 2017

 Score =  690 bits (1781), Expect = 0.0
 Identities = 404/1111 (36%), Positives = 597/1111 (53%), Gaps = 59/1111 (5%)

Query: 1153 KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPGLDPMIVEHRIPTKPECPPV 1205
            KI  + E   K K I L    P       DIFAW   DMPG+   ++EH +  K +  P+
Sbjct: 948  KISKSGESEAKTKKIPLDPSDPTKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPI 1007

Query: 1206 RQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLN 1265
            +Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLN
Sbjct: 1008 KQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN 1067

Query: 1266 KASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1325
            K+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY 
Sbjct: 1068 KSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYV 1127

Query: 1326 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKY 1385
             MPFGL NAGATYQR +   F   I + VE YVDD++VK+  ++  +  L + F  +R +
Sbjct: 1128 TMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAF 1187

Query: 1386 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYI 1445
            +++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +
Sbjct: 1188 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1247

Query: 1446 SRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYL 1505
            SRF+S +     P FKLL+K     W  E Q+AF+  K  L EPP+L  P    PL++Y+
Sbjct: 1248 SRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYV 1307

Query: 1506 AVFDESMGCVLG-QQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1561
            +   + +  VL  +++E G   K +  IY++S+   D +TRY  ++K    +    ++L 
Sbjct: 1308 SATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLS 1367

Query: 1562 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1621
            HY   H+  +++   P+  I       G+IA+W + L   D+ FK + +IK   LAD +A
Sbjct: 1368 HYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDLSFKPRISIKSQALADFVA 1426

Query: 1622 YQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAV 1681
                                  +  +C+E    +  +    W + FDG+    G G G V
Sbjct: 1427 ----------------------EWTECQEDTTVKKME---HWTMHFDGSKRLSGTGAGVV 1461

Query: 1682 IVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGE 1741
            ++SP G  + +   I F  ++N+AEYEA + G+  AI + IK L + GDS LV+NQ+  E
Sbjct: 1462 LISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKE 1521

Query: 1742 WETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIK 1801
            W     N+  YR   R+L   F  +EL H+ R +N+ AD LA   S   V   +DV +  
Sbjct: 1522 WSCLDDNMKAYRQEVRKLEDKFDGLELSHVLRHDNEAADRLANFGSKREVAP-SDVFVEH 1580

Query: 1802 MQRLERPSHVFAIGDVIDQAGENVVDY--KPWYYDIKQFLLSREYPPGASKQDKKTLRRL 1859
            +     P       D    AG + V      W   + +FL S+E P    K + + + R 
Sbjct: 1581 LYTPTVPHK-----DTTQAAGIHDVAMVETDWREPLIRFLTSQELP--QDKDEAERISRR 1633

Query: 1860 ASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYY 1919
            +  +++    LYK++   +L RCV   E  QL+ D+H G  G HA   T+  K  R G++
Sbjct: 1634 SKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFF 1693

Query: 1920 WMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGH 1979
            W     D  +  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+
Sbjct: 1694 WPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGY 1752

Query: 1980 RFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQA 2039
              + VAID F+KW+EA     +T      F   NI+ R+GVP++IITDNGT     V + 
Sbjct: 1753 THLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKD 1811

Query: 2040 LCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGY 2094
             CE+F I+   +S   P  NG VE AN  I      R+  ++      W + LP  L   
Sbjct: 1812 FCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSL 1871

Query: 2095 RTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKR 2154
            RTT   +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE R
Sbjct: 1872 RTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVR 1928

Query: 2155 MDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKK 2214
              A+ R   Y   ++   ++ V  R F VG+LVL++   Q    R K +P +EGP+++ +
Sbjct: 1929 EAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISE 1986

Query: 2215 AFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
                G+  L   DG  + N  N + +++++A
Sbjct: 1987 VTRPGSYRLKREDGTLVDNSWNIEYLRRFYA 2017



 Score = 51.6 bits (122), Expect = 3e-04
 Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 16/286 (5%)

Query: 131 RSIPVTKTMEEMMEELAKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDR 188
           R  PV      +    A+   H    +  + D V   T DL    +VD P  FK    ++
Sbjct: 389 RRRPVDLRDTIIQRRAARGYHHSPNRHDDDLDGVAAFTDDL---RRVDWPAGFKPTGIEK 445

Query: 189 YNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAT 248
           Y+G T P++ +  Y   +     ++  M +    +L + A  W   L +  I ++ EL  
Sbjct: 446 YDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRD 505

Query: 249 AFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLK 307
            F +++   T  RP  ++ L ++ QK  ES R+Y +R+     +I+   D + +   F K
Sbjct: 506 HFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTK 563

Query: 308 TLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFE------KAESSTSASKRYGN 361
            ++ + +       P    +++           D +   +      K    T A+   G+
Sbjct: 564 GIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGPSWKQNKGTPATGGGGS 623

Query: 362 GHHKKKETEVGMVSAGAGQSMATVAPINAAQ--MPPSYPYMPYSQH 405
            +HK ++ +   + A A  S    + +N     M    P+ P S H
Sbjct: 624 NNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
          Length = 1756

 Score =  689 bits (1778), Expect = 0.0
 Identities = 391/1080 (36%), Positives = 586/1080 (54%), Gaps = 48/1080 (4%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 716  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIK 775

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 776  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 835

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D +SGY+QI++   D  KTSFITP G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 836  DCYSGYHQIRLKESDCLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 895

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD+++K+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 896  EAYVDDVVIKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 955

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 956  ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1015

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1530
             Q+AF+  K +L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1016 AQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1075

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1076 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1134

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1135 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1181

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1182 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1229

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1230 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1289

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKP 1830
            + R  N+ AD LA   S   V   +    + ++ L  P+        I    +  +    
Sbjct: 1290 VLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQIAGTHDVALVEAD 1345

Query: 1831 WYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQ 1890
            W     +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  Q
Sbjct: 1346 WREPFIRFLTSQELP--QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQ 1403

Query: 1891 LMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHA 1950
            L+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   
Sbjct: 1404 LLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQE 1463

Query: 1951 LNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFI 2010
            L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F 
Sbjct: 1464 LQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF 1522

Query: 2011 KNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI- 2069
              NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE AN  I 
Sbjct: 1523 -INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMIL 1581

Query: 2070 ----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPS 2125
                 R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  S
Sbjct: 1582 QGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 1641

Query: 2126 LRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGE 2185
            LR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+
Sbjct: 1642 LRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGD 1698

Query: 2186 LVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1699 LVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1756



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 71/371 (19%), Positives = 142/371 (38%), Gaps = 27/371 (7%)

Query: 57  SADNRFTMPVGFPYGLPPFFTPVATASTSGTANNVLTPTTNAAS-------IIATLPQTT 109
           S +NR ++P G P     +F  ++    S  +  + +  T+          I+  LP   
Sbjct: 43  SGENRISVPFGLPNAAESYFKTISIELASNHSGEIASSPTSPDQDDGAYPPILMKLPDDL 102

Query: 110 VAVTEPLVHTLPQGININTQHRSIPVTKTMEEM------MEELAKELRHEIQANRGNADS 163
            AV+   + T         +  S P++ +  E+      +   A+    ++      A +
Sbjct: 103 AAVS---ITTASPSRRPRQKSASTPISPSFREVGVILQPLRLAAESPTSDLMTTVIQASA 159

Query: 164 VKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDS 223
              QD    + V     FK    ++Y+G T P++ +  Y   +     +   M +    +
Sbjct: 160 SPAQDPIAGAGVTTSAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVA 219

Query: 224 LMEDAAEWYTSLSKNDIHTFDELATAFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYA 282
           L + A  W   L +  I ++ EL   F +++   T  RP  ++ L ++ QK  ES R+Y 
Sbjct: 220 LADSARSWLHGLPRGTIRSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYI 278

Query: 283 QRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDG 342
           +R+     +I+   D + +   F K ++ + +       P    +++           D 
Sbjct: 279 RRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDA 337

Query: 343 IIVFE------KAESSTSASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQ--MP 394
           +   +      K    T A+   G+ +HK ++ +   + A A  S    + +N     M 
Sbjct: 338 VTASKQSGPSWKPNKGTPATGGGGSNNHKDRKRKPEELVATATHSSRQRSRVNTFDKIMN 397

Query: 395 PSYPYMPYSQH 405
              P+ P S H
Sbjct: 398 SQCPHHPNSNH 408



 Score = 48.1 bits (113), Expect = 0.003
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 528 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 587

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 951
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K     +++++  +
Sbjct: 588 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRRVLSLRSD 644


>UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]
          Length = 2008

 Score =  685 bits (1767), Expect = 0.0
 Identities = 394/1089 (36%), Positives = 587/1089 (53%), Gaps = 62/1089 (5%)

Query: 1166 IIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1225
            +I  L+   DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ 
Sbjct: 973  LITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELT 1032

Query: 1226 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1285
            K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+T
Sbjct: 1033 KLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDST 1092

Query: 1286 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1345
            A  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   
Sbjct: 1093 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRC 1152

Query: 1346 FHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1405
            F   I + VE YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLG
Sbjct: 1153 FSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLG 1212

Query: 1406 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1465
            F+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K
Sbjct: 1213 FMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKK 1272

Query: 1466 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLG-QQDETG- 1523
                 W  E Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G 
Sbjct: 1273 TDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLAVEREEEGH 1332

Query: 1524 --KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYI 1581
              K +  IY++S+   D +TRY  ++K               L  H+  +++   P+  I
Sbjct: 1333 VQKVQRPIYFVSEVLADSKTRYPQVQK--------------LLYGHSVTVVTSF-PLGDI 1377

Query: 1582 FEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIM 1641
                   G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + 
Sbjct: 1378 LHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENME 1432

Query: 1642 YLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECT 1701
            +                    W + FDG+    G G G V++SP G  + +   I F  +
Sbjct: 1433 H--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSAS 1472

Query: 1702 NNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLT 1761
            +N+AEYEA + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L  
Sbjct: 1473 HNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLED 1532

Query: 1762 YFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQA 1821
             F  +EL H+ R  N+ AD LA   S   V   +    + ++ L  P+        +   
Sbjct: 1533 KFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQVAGT 1588

Query: 1822 GENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLR 1881
             +  V    W   + +FL S+E P    K + + + R +  +++    LYK++   +L R
Sbjct: 1589 HDVAVVETDWREPLIRFLTSQELP--QDKDEAERISRRSKLYVMHEAELYKKSPSGILQR 1646

Query: 1882 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 1941
            CV   E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A
Sbjct: 1647 CVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFA 1706

Query: 1942 DKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 2001
             +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +
Sbjct: 1707 RQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTI 1765

Query: 2002 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 2061
            T      F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG 
Sbjct: 1766 TADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQ 1824

Query: 2062 VEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 2116
            VE AN  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+
Sbjct: 1825 VERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAM 1884

Query: 2117 LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 2176
            LP EVE  SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V
Sbjct: 1885 LPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNV 1941

Query: 2177 HPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVN 2236
              R F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N
Sbjct: 1942 RSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWN 1999

Query: 2237 ADIVKKYFA 2245
             + +++++A
Sbjct: 2000 IEHLRRFYA 2008



 Score = 50.1 bits (118), Expect = 8e-04
 Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 16/286 (5%)

Query: 131 RSIPVTKTMEEMMEELAKELRHEIQANRGNADSVK--TQDLCLVSKVDVPKKFKIPDFDR 188
           R  PV      +    A+   H    +  + D V   T DL    +VD P  FK    ++
Sbjct: 385 RRRPVDLRDTIIQRRAARGYHHSPNRHDDDLDEVAAFTDDL---RRVDWPAGFKPTGIEK 441

Query: 189 YNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAT 248
           Y+G T P + +  Y   +     ++  M +    +L + A  W   L +  I ++ EL  
Sbjct: 442 YDGTTNPGSWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLHGLPRGTIGSWAELRD 501

Query: 249 AFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLK 307
            F +++   T  RP  ++ L ++ QK  ES R+Y +R+     +I+   D + +   F K
Sbjct: 502 HFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISDITD-DVIIAAFTK 559

Query: 308 TLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFE------KAESSTSASKRYGN 361
            ++ + +       P    +++           D +   +      K    T A+   G+
Sbjct: 560 GIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTASKQSGPSWKQNKGTPATGGGGS 619

Query: 362 GHHKKKETEVGMVSAGAGQSMATVAPINAAQ--MPPSYPYMPYSQH 405
            +HK ++ +   + A A  S    + +N     M    P+ P S H
Sbjct: 620 NNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQCPHHPNSNH 665



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q93Y89 Gag-pol [Oryza sativa]
          Length = 2017

 Score =  682 bits (1759), Expect = 0.0
 Identities = 388/1080 (35%), Positives = 585/1080 (53%), Gaps = 48/1080 (4%)

Query: 1175 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1234
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1235 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1294
             V +P+W+AN V V KK G+ RMCVD+ DLN + PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1295 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1354
            D + GY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1355 EVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1414
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1415 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1474
             +P+K+ AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPD 1276

Query: 1475 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1530
             Q+AF+  K  L EPP+L  P    PL++Y+A   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1531 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1590
            ++S+   D +TRY  ++K    +    ++L HY  +H+  +++    +  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTSFS-LGDILHNREANGR 1395

Query: 1591 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 1650
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1651 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1710
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1711 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHH 1770
            + G+  AI + IK L + GDS LV+NQ+  EW     N++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1771 IPRDENQMADALATLSSMFRVNHWNDVPIIKMQRLERPSHVFAIGDVIDQAGENVVDYKP 1830
            + R  N+ AD LA   S   V   +    + ++ L  P+        I    +  +    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQIAGTHDVALVEAD 1606

Query: 1831 WYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQ 1890
            W   + +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  Q
Sbjct: 1607 WREPLIRFLTSQELP--QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQ 1664

Query: 1891 LMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHA 1950
            L+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   
Sbjct: 1665 LLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQE 1724

Query: 1951 LNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFI 2010
            L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F 
Sbjct: 1725 LQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF 1783

Query: 2011 KNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI- 2069
              NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE AN  I 
Sbjct: 1784 -INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMIL 1842

Query: 2070 ----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPS 2125
                 R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  S
Sbjct: 1843 QGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 1902

Query: 2126 LRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGE 2185
            LR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+
Sbjct: 1903 LRF---RNYREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGD 1959

Query: 2186 LVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2245
            LVL++   Q    R K +P +EGP+++      G+  L   DG  + N  N + +++++A
Sbjct: 1960 LVLRK--IQTTRDRHKLSPLWEGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2017



 Score = 47.0 bits (110), Expect = 0.007
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 840 ISNVLVDTGSSLNVMPKTTLDQLSYRGTLLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 898
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 899 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 938
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMK 892



 Score = 46.2 bits (108), Expect = 0.012
 Identities = 50/241 (20%), Positives = 97/241 (39%), Gaps = 11/241 (4%)

Query: 174 KVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYT 233
           +VD P  FK    ++Y+G T P++ +  Y   +     +   M +    +L + A  W  
Sbjct: 431 RVDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAMANYLPVALADSARSWLH 490

Query: 234 SLSKNDIHTFDELATAFKSHYGFNTRLRPNREF-LRSLSQKKEESFREYAQRWRGAAARI 292
            L +  I ++ EL   F +++   T   P  ++ L ++ QK  ES R+Y +R+     +I
Sbjct: 491 GLPRGTIGSWAELRDHFIANFQ-GTFEHPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKI 549

Query: 293 TPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFE----- 347
           +   D + +   F K ++ + +       P    +++           D +   +     
Sbjct: 550 SDITD-DVIIAAFTKGIRHEELVGKFGRKPPKTVKLMFEKANEYAKAEDAVTASKQSGPS 608

Query: 348 -KAESSTSASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQ--MPPSYPYMPYSQ 404
            K    T A    G+ +HK ++ +   + A A  S    + +N     M    P+ P S 
Sbjct: 609 WKPNKGTPAKGGGGSNNHKDRKRKPEELVATATHSSRQHSRVNTFDKIMNSQCPHHPNSN 668

Query: 405 H 405
           H
Sbjct: 669 H 669


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,857,523,811
Number of Sequences: 2790947
Number of extensions: 172725373
Number of successful extensions: 605639
Number of sequences better than 10.0: 30081
Number of HSP's better than 10.0 without gapping: 4697
Number of HSP's successfully gapped in prelim test: 25463
Number of HSP's that attempted gapping in prelim test: 571817
Number of HSP's gapped (non-prelim): 43757
length of query: 2245
length of database: 848,049,833
effective HSP length: 143
effective length of query: 2102
effective length of database: 448,944,412
effective search space: 943681154024
effective search space used: 943681154024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)